pycom02g12680
ERF Family

superfamily protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
9258316 .. 9260088
1773 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g12680.1

Sequence Viewer

Length: 1773 bp
ATGGGTCGGATACGAACTCCGACGCCAAGAAAAACTCGTCAATTCTCCGGAAGCTTCAAGAAAACAAGCTCAGGGAGGCTCTGGAGCAAGCTTCGGAAGATGGGTTTCTCTTCAAATCTCAGGACATGGAGTCTGAGGCCATTGCCTACCAGGACGAGGGGATTGGACGGTCCAGATCGCTCGCTAGGCTCCATGCCCAGCGGGAGTTTCTTTGTGCCACTGCTCTTGCTGCTGACCGGATTTTCGAGTCCGAAAACGCCATCCCTGAGCTCCATGAAGCGTTCACAAAGTTCCTCACTATGTACCCGGATTACCAGTCTTCGGAGAAGATTGATCGAACGTAGGGTGGAGGAGTATGCACATTTGTCTCCAAAGGTATGCCTTGATTACTGCGGGTTTGGGCTTTTTTCGTACCTTCAGACACTGCACTATTGGGATTCTTCTACATTTAGCTTGTCTGAGATAACTGCAAATTTGAATAATCATGCACTTTATGGTGGTGCTGAGAAAGGCACTGTGGAACATGATATAAAAACTTGGATTGTGGATTATTTGAACATTCCTGAGAGTGAGTATGGTCTTGTTTTTACTGTGAGTAGAGGTTCTGCATTTAAATTGTTGGCTGAATCGTACCCTTTTCATACGAACAAGAAATTGTTGACGATGTTCGATTATGAGAGCCAGTCTGTGAATTGGATGGCTCAGAGTGCTAGAGAGAAGGGTGCAAAGGTGCACAGTGCTTGGTTTAAATGGCCAACCCTCAAACTCTGTTCCACTGATTTGAGAAAGGAGATTTCAATTAAGAAGAGGAGGAAGAAGGATTCCGCAGCTGGTCTTTTTGTGTTTCCGGTGCAGTCTAGAGTTACTGGGGCGAAGTATTCTTACCAATGGATGGCACTGGCTCAGCAGAACAATTGGCATGTCTTACTTGATGCAGGGTCTTTGGGTCCCAAAGACATGGATTCACTTGGACTGTCACTCTTCCGCCCTGATTTTATCATCACATCGTTTTACAAGTTATTTGGGTTTGATCCAACTGGATTTGGCTGCCTTCTGATTAAGAAATCAGTAATCGGATGCCTTCAAAATCAGTCAGGGTCAACTGGGTCTGGAATGGTGAAGATTGCCCCTGAATACCCTTTATATCTTAGTGATTCGGTTGATGGTATGGACAAAATGGCTGGAACTGAGGATGATGAAGTAACTGAAAATGGTGAGAAAACCACTGAAACTCGGCAGGGAAAACAGATGCCTGCATTCTCTGGAGCATACACATCCTCTCAGGTCAGGGATGTATTTGAGACTGAGATGGATCACGATAACAGCTCAGACAGGGATGGGACGAGCACCTTATTTGAAGAAGTTGAGAGTGTCTCAGCGGGGGAGCTTATGAAGAGTCCAATCTTCAGTGAAGACTATTCATCAGACAATTCGTATTGGATTGGCTTGGGTCAGAGCCCAATGGGTTCCGACCATTCTAGTCAGATTAACAAACATAAGATTGCCTCTCCTCAGCCTCCATTTTGGTTTTCTGGCAGGAAGAATCGTAAGCAAGTTTCCCCAAAACCTGCTTCTAGGCTGTATGGCAGCCCCGTATTTGATGATAAAAAGGCAAACTCAGGGCTACATGATGACTCTCATGTGCTATCATTTGACGCCGCTGTCCTATCAATTTCTCAGGAGCTGGACTGTGTCAAGGAGGTCAATGAAGAACAATTTGCAGAAGCATGTCCCACTTTACAAAATGGTGAAGGTGCTTCTGATCGATCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families
No domains found.

Protein Analysis

591

Amino Acids

65.85

Weight (kDa)

8.75

Isoelectric Point (pI)

54.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1661
Acc36I ACCTGC 1 cut(s) 1576
AccB7I CCANNNNNTGG 1 cut(s) 892
AccIII TCCGGA 1 cut(s) 47
AciI CCGC 6 cut(s) 201, 393, 825, 985, 1379, 1659
AclWI GGATC 2 cut(s) 1025, 1320
AcoI YGGCCR 1 cut(s) 752
AcsI RAATTY 1 cut(s) 472
AcuI CTGAAG 2 cut(s) 401, 1390
AcyI GRCGYC 2 cut(s) 23, 1656
AfaI GTAC 3 cut(s) 304, 413, 632
AfiI CCNNNNNNNGG 3 cut(s) 156, 321, 892
AgsI TTSAA 7 cut(s) 58, 114, 478, 556, 798, 1085, 1358
AhdI GACNNNNNGTC 1 cut(s) 129
AjnI CCWGG 1 cut(s) 149
AjuI GAANNNNNNNTTGG 2 cut(s) 1555, 1587
AluBI AGCT 9 cut(s) 54, 69, 91, 270, 453, 830, 1326, 1387, 1684
AluI AGCT 9 cut(s) 54, 69, 91, 270, 453, 830, 1326, 1387, 1684
Alw21I GWGCWC 3 cut(s) 272, 735, 1349
Alw26I GTCTC 3 cut(s) 372, 1295, 1378
Alw44I GTGCAC 1 cut(s) 731
AlwI GGATC 2 cut(s) 1025, 1320
AlwNI CAGNNNCTG 2 cut(s) 424, 1684
Aor13HI TCCGGA 1 cut(s) 47
AoxI GGCC 2 cut(s) 137, 752
ApaLI GTGCAC 1 cut(s) 731
ApeKI GCWGC 4 cut(s) 229, 827, 1047, 1587
ApoI RAATTY 1 cut(s) 472
ArsI GACNNNNNNTTYG 2 cut(s) 226, 258
AspS9I GGNCC 2 cut(s) 170, 947
AsuC2I CCSGG 1 cut(s) 307
AsuHPI GGTGA 3 cut(s) 1129, 1226, 1760
AvaII GGWCC 2 cut(s) 170, 947
BaeGI GKGCMC 1 cut(s) 735
BalI TGGCCA 1 cut(s) 754
BanII GRGCYC 2 cut(s) 272, 1460
BarI GAAGNNNNNNTAC 2 cut(s) 866, 898
BbsI GAAGAC 2 cut(s) 311, 1419
Bbv12I GWGCWC 3 cut(s) 272, 735, 1349
BbvCI CCTCAGC 1 cut(s) 1512
BbvI GCAGC 4 cut(s) 216, 839, 1034, 1599
BccI CCATC 7 cut(s) 94, 268, 691, 886, 1157, 1303, 1331
BciT130I CCWGG 1 cut(s) 151
BciVI GTATCC 1 cut(s) 3
BcnI CCSGG 1 cut(s) 307
BcoDI GTCTC 3 cut(s) 372, 1295, 1378
BfaI CTAG 5 cut(s) 185, 711, 858, 1479, 1575
BfuAI ACCTGC 1 cut(s) 1576
BfuI GTATCC 1 cut(s) 3
BisI GCNGC 5 cut(s) 230, 828, 1048, 1588, 1659
BlpI GCTNAGC 1 cut(s) 903
BlsI GCNGC 5 cut(s) 231, 829, 1049, 1589, 1660
Bme1390I CCNGG 2 cut(s) 151, 307
Bme18I GGWCC 2 cut(s) 170, 947
BmeRI GACNNNNNGTC 1 cut(s) 129
BmgT120I GGNCC 2 cut(s) 170, 947
BmiI GGNNCC 4 cut(s) 190, 948, 949, 1468
BmrFI CCNGG 2 cut(s) 151, 307
BmrI ACTGGG 2 cut(s) 876, 1113
BmsI GCATC 3 cut(s) 922, 1067, 1239
BmuI ACTGGG 2 cut(s) 876, 1113
BpiI GAAGAC 2 cut(s) 311, 1419
BplI GAGNNNNNCTC 2 cut(s) 1358, 1390
BpmI CTGGAG 2 cut(s) 103, 1284
Bpu10I CCTNAGC 3 cut(s) 70, 266, 1512
Bpu1102I GCTNAGC 1 cut(s) 903
BpuMI CCSGG 1 cut(s) 307
Bsa29I ATCGAT 1 cut(s) 1765
BsaHI GRCGYC 2 cut(s) 23, 1656
BsaWI WCCGGW 3 cut(s) 47, 236, 847
Bsc4I CCNNNNNNNGG 3 cut(s) 156, 321, 892
Bse1I ACTGG 6 cut(s) 315, 682, 871, 903, 1042, 1108
Bse3DI GCAATG 1 cut(s) 140
BseAI TCCGGA 1 cut(s) 47
BseBI CCWGG 1 cut(s) 151
BseCI ATCGAT 1 cut(s) 1765
BseGI GGATG 8 cut(s) 260, 702, 897, 1082, 1198, 1274, 1297, 1342
BseLI CCNNNNNNNGG 3 cut(s) 156, 321, 892
BseMI GCAATG 1 cut(s) 140
BseNI ACTGG 6 cut(s) 315, 682, 871, 903, 1042, 1108
BseRI GAGGAG 3 cut(s) 365, 823, 1500
BseSI GKGCMC 1 cut(s) 735
BseXI GCAGC 4 cut(s) 216, 839, 1034, 1599
BseYI CCCAGC 1 cut(s) 197
BsgI GTGCAG 2 cut(s) 410, 872
BshFI GGCC 2 cut(s) 139, 754
BshVI ATCGAT 1 cut(s) 1765
BsiHKAI GWGCWC 3 cut(s) 272, 735, 1349
BsiSI CCGG 4 cut(s) 48, 237, 307, 848
BslFI GGGAC 3 cut(s) 933, 1354, 1716
BslI CCNNNNNNNGG 3 cut(s) 156, 321, 892
BsmAI GTCTC 3 cut(s) 372, 1295, 1378
BsmFI GGGAC 3 cut(s) 933, 1354, 1716
BsmI GAATGC 1 cut(s) 1256
BsnI GGCC 2 cut(s) 139, 754
Bsp1286I GDGCHC 4 cut(s) 272, 735, 1349, 1460
Bsp13I TCCGGA 1 cut(s) 47
Bsp143I GATC 6 cut(s) 175, 333, 1030, 1312, 1762, 1766
Bsp1720I GCTNAGC 1 cut(s) 903
BspACI CCGC 6 cut(s) 201, 393, 825, 985, 1379, 1659
BspANI GGCC 2 cut(s) 139, 754
BspDI ATCGAT 1 cut(s) 1765
BspEI TCCGGA 1 cut(s) 47
BspLI GGNNCC 4 cut(s) 190, 948, 949, 1468
BspMI ACCTGC 1 cut(s) 1576
BspPI GGATC 2 cut(s) 1025, 1320
BsrDI GCAATG 1 cut(s) 140
BsrI ACTGG 6 cut(s) 315, 682, 871, 903, 1042, 1108
BssMI GATC 6 cut(s) 175, 333, 1030, 1312, 1762, 1766
BssNI GRCGYC 2 cut(s) 23, 1656
Bst2UI CCWGG 1 cut(s) 151
Bst4CI ACNGT 6 cut(s) 170, 517, 592, 737, 975, 1691
Bst6I CTCTTC 4 cut(s) 115, 800, 986, 1388
BstACI GRCGYC 2 cut(s) 23, 1656
BstC8I GCNNGC 3 cut(s) 89, 182, 1254
BstF5I GGATG 8 cut(s) 260, 702, 897, 1082, 1198, 1274, 1297, 1342
BstKTI GATC 6 cut(s) 178, 336, 1033, 1315, 1765, 1769
BstMAI GTCTC 3 cut(s) 372, 1295, 1378
BstMBI GATC 6 cut(s) 175, 333, 1030, 1312, 1762, 1766
BstMWI GCNNNNNNNGC 3 cut(s) 186, 229, 707
BstNI CCWGG 1 cut(s) 151
BstNSI RCATGY 2 cut(s) 923, 1731
BstSCI CCNGG 2 cut(s) 149, 305
BstSLI GKGCMC 1 cut(s) 735
BstV1I GCAGC 4 cut(s) 216, 839, 1034, 1599
BstV2I GAAGAC 2 cut(s) 311, 1419
BstXI CCANNNNNNTGG 1 cut(s) 958
Bsu15I ATCGAT 1 cut(s) 1765
BsuI GTATCC 1 cut(s) 3
BsuRI GGCC 2 cut(s) 139, 754
BsuTUI ATCGAT 1 cut(s) 1765
BtsCI GGATG 8 cut(s) 260, 702, 897, 1082, 1198, 1274, 1297, 1342
BtsI GCAGTG 2 cut(s) 218, 422
BtsIMutI CAGTG 8 cut(s) 218, 422, 513, 742, 774, 896, 1224, 1414
BveI ACCTGC 1 cut(s) 1576
Cac8I GCNNGC 3 cut(s) 89, 182, 1254
CaiI CAGNNNCTG 2 cut(s) 424, 1684
Cfr13I GGNCC 2 cut(s) 170, 947
ClaI ATCGAT 1 cut(s) 1765
CseI GACGC 2 cut(s) 31, 1664
Csp6I GTAC 3 cut(s) 303, 412, 631
CspCI CAANNNNNGTGG 2 cut(s) 207, 242
CviQI GTAC 3 cut(s) 303, 412, 631
DpnI GATC 6 cut(s) 177, 335, 1032, 1314, 1764, 1768
DpnII GATC 6 cut(s) 175, 333, 1030, 1312, 1762, 1766
DraI TTTAAA 2 cut(s) 613, 748
DrdI GACNNNNNNGTC 1 cut(s) 1661
DriI GACNNNNNGTC 1 cut(s) 129
DseDI GACNNNNNNGTC 1 cut(s) 1661
EaeI YGGCCR 1 cut(s) 752
Eam1104I CTCTTC 4 cut(s) 115, 800, 986, 1388
Eam1105I GACNNNNNGTC 1 cut(s) 129
EarI CTCTTC 4 cut(s) 115, 800, 986, 1388
EciI GGCGGA 1 cut(s) 974
Ecl136II GAGCTC 1 cut(s) 270
Eco24I GRGCYC 2 cut(s) 272, 1460
Eco47I GGWCC 2 cut(s) 170, 947
Eco53kI GAGCTC 1 cut(s) 270
Eco57I CTGAAG 2 cut(s) 401, 1390
EcoICRI GAGCTC 1 cut(s) 270
EcoO109I RGGNCCY 1 cut(s) 947
EcoRII CCWGG 1 cut(s) 149
EcoT38I GRGCYC 2 cut(s) 272, 1460
FaqI GGGAC 3 cut(s) 933, 1354, 1716
FauI CCCGC 3 cut(s) 194, 386, 1372
Fnu4HI GCNGC 5 cut(s) 230, 828, 1048, 1588, 1659
FokI GGATG 8 cut(s) 247, 709, 904, 1089, 1205, 1261, 1304, 1349
FriOI GRGCYC 2 cut(s) 272, 1460
Fsp4HI GCNGC 5 cut(s) 230, 828, 1048, 1588, 1659
FspBI CTAG 5 cut(s) 185, 711, 858, 1479, 1575
GluI GCNGC 5 cut(s) 230, 828, 1048, 1588, 1659
GsaI CCCAGC 1 cut(s) 201
GsuI CTGGAG 2 cut(s) 103, 1284
HaeIII GGCC 2 cut(s) 139, 754
HapII CCGG 4 cut(s) 48, 237, 307, 848
HgaI GACGC 2 cut(s) 31, 1664
Hin1I GRCGYC 2 cut(s) 23, 1656
HincII GTYRAC 2 cut(s) 660, 1101
HindII GTYRAC 2 cut(s) 660, 1101
HindIII AAGCTT 2 cut(s) 52, 89
HpaII CCGG 4 cut(s) 48, 237, 307, 848
HphI GGTGA 3 cut(s) 1129, 1226, 1760
Hpy166II GTNNAC 4 cut(s) 284, 660, 733, 1101
Hpy8I GTNNAC 4 cut(s) 284, 660, 733, 1101
Hpy99I CGWCG 1 cut(s) 25
HpyAV CCTTC 6 cut(s) 425, 712, 811, 1061, 1091, 1745
HpyCH4III ACNGT 6 cut(s) 170, 517, 592, 737, 975, 1691
HpyCH4IV ACGT 1 cut(s) 340
HpyF10VI GCNNNNNNNGC 3 cut(s) 186, 229, 707
HpySE526I ACGT 1 cut(s) 340
Hsp92I GRCGYC 2 cut(s) 23, 1656
KflI GGGWCCC 1 cut(s) 947
Kpn2I TCCGGA 1 cut(s) 47
Kzo9I GATC 6 cut(s) 175, 333, 1030, 1312, 1762, 1766
LmnI GCTCC 6 cut(s) 84, 194, 275, 1265, 1384, 1681
Lsp1109I GCAGC 4 cut(s) 216, 839, 1034, 1599
LweI GCATC 3 cut(s) 922, 1067, 1239
MaeI CTAG 5 cut(s) 185, 711, 858, 1479, 1575
MaeII ACGT 1 cut(s) 340
MaeIII GTNAC 3 cut(s) 862, 975, 1201
MalI GATC 6 cut(s) 177, 335, 1032, 1314, 1764, 1768
MboI GATC 6 cut(s) 175, 333, 1030, 1312, 1762, 1766
MfeI CAATTG 1 cut(s) 913
MhlI GDGCHC 4 cut(s) 272, 735, 1349, 1460
MlsI TGGCCA 1 cut(s) 754
MluNI TGGCCA 1 cut(s) 754
MlyI GAGTC 4 cut(s) 139, 256, 1405, 1628
MmeI TCCRAC 3 cut(s) 44, 1058, 1494
Mox20I TGGCCA 1 cut(s) 754
MroI TCCGGA 1 cut(s) 47
MscI TGGCCA 1 cut(s) 754
MseI TTAA 5 cut(s) 612, 747, 801, 1059, 1488
Msp20I TGGCCA 1 cut(s) 754
MspA1I CMGCKG 4 cut(s) 201, 830, 1379, 1661
MspI CCGG 4 cut(s) 48, 237, 307, 848
MspR9I CCNGG 2 cut(s) 151, 307
MunI CAATTG 1 cut(s) 913
Mva1269I GAATGC 1 cut(s) 1256
MvaI CCWGG 1 cut(s) 151
MwoI GCNNNNNNNGC 3 cut(s) 186, 229, 707
NciI CCSGG 1 cut(s) 307
NdeII GATC 6 cut(s) 175, 333, 1030, 1312, 1762, 1766
NlaIV GGNNCC 4 cut(s) 190, 948, 949, 1468
NmeAIII GCCGAG 1 cut(s) 1213
NmuCI GTSAC 1 cut(s) 975
NspI RCATGY 2 cut(s) 923, 1731
PctI GAATGC 1 cut(s) 1256
PfeI GAWTC 6 cut(s) 437, 626, 821, 962, 1154, 1543
PflFI GACNNNGTC 1 cut(s) 1691
PflMI CCANNNNNTGG 1 cut(s) 892
PkrI GCNGC 5 cut(s) 231, 829, 1049, 1589, 1660
PleI GAGTC 4 cut(s) 138, 255, 1404, 1628
PpsI GAGTC 4 cut(s) 138, 255, 1404, 1628
PpuMI RGGWCCY 1 cut(s) 947
Psp124BI GAGCTC 1 cut(s) 272
Psp5II RGGWCCY 1 cut(s) 947
Psp6I CCWGG 1 cut(s) 149
PspFI CCCAGC 1 cut(s) 197
PspGI CCWGG 1 cut(s) 149
PspN4I GGNNCC 4 cut(s) 190, 948, 949, 1468
PspPI GGNCC 2 cut(s) 170, 947
PspPPI RGGWCCY 1 cut(s) 947
PstNI CAGNNNCTG 2 cut(s) 424, 1684
PsyI GACNNNGTC 1 cut(s) 1691
PvuII CAGCTG 1 cut(s) 830
RsaI GTAC 3 cut(s) 304, 413, 632
RsaNI GTAC 3 cut(s) 303, 412, 631
SacI GAGCTC 1 cut(s) 272
SaqAI TTAA 5 cut(s) 612, 747, 801, 1059, 1488
SatI GCNGC 5 cut(s) 230, 828, 1048, 1588, 1659
Sau3AI GATC 6 cut(s) 175, 333, 1030, 1312, 1762, 1766
Sau96I GGNCC 2 cut(s) 170, 947
SchI GAGTC 4 cut(s) 139, 256, 1405, 1628
ScrFI CCNGG 2 cut(s) 151, 307
SduI GDGCHC 4 cut(s) 272, 735, 1349, 1460
SfaNI GCATC 3 cut(s) 922, 1067, 1239
SinI GGWCC 2 cut(s) 170, 947
SmiI ATTTAAAT 1 cut(s) 613
SsiI CCGC 6 cut(s) 201, 393, 825, 985, 1379, 1659
SspMI CTAG 5 cut(s) 185, 711, 858, 1479, 1575
SstI GAGCTC 1 cut(s) 272
StyD4I CCNGG 2 cut(s) 149, 305
SwaI ATTTAAAT 1 cut(s) 613
TaaI ACNGT 6 cut(s) 170, 517, 592, 737, 975, 1691
TaiI ACGT 1 cut(s) 343
TaqI TCGA 4 cut(s) 245, 336, 669, 1765
TauI GCSGC 1 cut(s) 1661
TfiI GAWTC 6 cut(s) 437, 626, 821, 962, 1154, 1543
Tru1I TTAA 5 cut(s) 612, 747, 801, 1059, 1488
Tru9I TTAA 5 cut(s) 612, 747, 801, 1059, 1488
TscAI CASTG 8 cut(s) 225, 429, 520, 742, 781, 903, 1231, 1414
TseFI GTSAC 1 cut(s) 975
TseI GCWGC 4 cut(s) 229, 827, 1047, 1587
Tsp45I GTSAC 1 cut(s) 975
TspDTI ATGAA 6 cut(s) 290, 629, 1212, 1406, 1410, 1722
TspRI CASTG 8 cut(s) 225, 429, 520, 742, 781, 903, 1231, 1414
Tth111I GACNNNGTC 1 cut(s) 1691
Van91I CCANNNNNTGG 1 cut(s) 892
VneI GTGCAC 1 cut(s) 731
VpaK11BI GGWCC 2 cut(s) 170, 947
XapI RAATTY 1 cut(s) 472
XbaI TCTAGA 1 cut(s) 857
XceI RCATGY 2 cut(s) 923, 1731
XspI CTAG 5 cut(s) 185, 711, 858, 1479, 1575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.