superfamily protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G23520 |
| fragaria_vesca | FvH4_1g14760 |
| malus_domestica | MD02G1160700.v1.1 MD02G1160800.v1.1 MD15G1274900.v1.1 |
| prunus_persica | Prupe.7G142800_v2.0.a1 Prupe.7G142900_v2.0.a1 |
| pyrus_communis | pycom02g12670 pycom02g12680 pycom02g12690 pycom15g23800 |
| rosa_chinensis | RchiOBHm_Chr2g0103691 RchiOBHm_Chr2g0103701 |
| rosa_laevigata | RLG00000017249 RLG00000017250 |
| rosa_multiflora | Rmu_sc0001852.1_g000009 Rmu_sc0001852.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00139470 Rroxscaffold_2G00139480 Rroxscaffold_5G00365360 |
| rosa_rugosa | Rorug02G0116600 Rorug02G0116700 |
| rosa_samantha | Rh2AG165300 Rh2AG165400 Rh2BG172500 Rh2BG172600 Rh2CG171400 Rh2CG171500 Rh2DG170900 Rh2DG171000 |
| rosa_wichuraiana | Rw2G012950 Rw2G012960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1661 |
| Acc36I | ACCTGC | 1 cut(s) | 1576 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 892 |
| AccIII | TCCGGA | 1 cut(s) | 47 |
| AciI | CCGC | 6 cut(s) | 201, 393, 825, 985, 1379, 1659 |
| AclWI | GGATC | 2 cut(s) | 1025, 1320 |
| AcoI | YGGCCR | 1 cut(s) | 752 |
| AcsI | RAATTY | 1 cut(s) | 472 |
| AcuI | CTGAAG | 2 cut(s) | 401, 1390 |
| AcyI | GRCGYC | 2 cut(s) | 23, 1656 |
| AfaI | GTAC | 3 cut(s) | 304, 413, 632 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 156, 321, 892 |
| AgsI | TTSAA | 7 cut(s) | 58, 114, 478, 556, 798, 1085, 1358 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 129 |
| AjnI | CCWGG | 1 cut(s) | 149 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1555, 1587 |
| AluBI | AGCT | 9 cut(s) | 54, 69, 91, 270, 453, 830, 1326, 1387, 1684 |
| AluI | AGCT | 9 cut(s) | 54, 69, 91, 270, 453, 830, 1326, 1387, 1684 |
| Alw21I | GWGCWC | 3 cut(s) | 272, 735, 1349 |
| Alw26I | GTCTC | 3 cut(s) | 372, 1295, 1378 |
| Alw44I | GTGCAC | 1 cut(s) | 731 |
| AlwI | GGATC | 2 cut(s) | 1025, 1320 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 424, 1684 |
| Aor13HI | TCCGGA | 1 cut(s) | 47 |
| AoxI | GGCC | 2 cut(s) | 137, 752 |
| ApaLI | GTGCAC | 1 cut(s) | 731 |
| ApeKI | GCWGC | 4 cut(s) | 229, 827, 1047, 1587 |
| ApoI | RAATTY | 1 cut(s) | 472 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 226, 258 |
| AspS9I | GGNCC | 2 cut(s) | 170, 947 |
| AsuC2I | CCSGG | 1 cut(s) | 307 |
| AsuHPI | GGTGA | 3 cut(s) | 1129, 1226, 1760 |
| AvaII | GGWCC | 2 cut(s) | 170, 947 |
| BaeGI | GKGCMC | 1 cut(s) | 735 |
| BalI | TGGCCA | 1 cut(s) | 754 |
| BanII | GRGCYC | 2 cut(s) | 272, 1460 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 866, 898 |
| BbsI | GAAGAC | 2 cut(s) | 311, 1419 |
| Bbv12I | GWGCWC | 3 cut(s) | 272, 735, 1349 |
| BbvCI | CCTCAGC | 1 cut(s) | 1512 |
| BbvI | GCAGC | 4 cut(s) | 216, 839, 1034, 1599 |
| BccI | CCATC | 7 cut(s) | 94, 268, 691, 886, 1157, 1303, 1331 |
| BciT130I | CCWGG | 1 cut(s) | 151 |
| BciVI | GTATCC | 1 cut(s) | 3 |
| BcnI | CCSGG | 1 cut(s) | 307 |
| BcoDI | GTCTC | 3 cut(s) | 372, 1295, 1378 |
| BfaI | CTAG | 5 cut(s) | 185, 711, 858, 1479, 1575 |
| BfuAI | ACCTGC | 1 cut(s) | 1576 |
| BfuI | GTATCC | 1 cut(s) | 3 |
| BisI | GCNGC | 5 cut(s) | 230, 828, 1048, 1588, 1659 |
| BlpI | GCTNAGC | 1 cut(s) | 903 |
| BlsI | GCNGC | 5 cut(s) | 231, 829, 1049, 1589, 1660 |
| Bme1390I | CCNGG | 2 cut(s) | 151, 307 |
| Bme18I | GGWCC | 2 cut(s) | 170, 947 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 129 |
| BmgT120I | GGNCC | 2 cut(s) | 170, 947 |
| BmiI | GGNNCC | 4 cut(s) | 190, 948, 949, 1468 |
| BmrFI | CCNGG | 2 cut(s) | 151, 307 |
| BmrI | ACTGGG | 2 cut(s) | 876, 1113 |
| BmsI | GCATC | 3 cut(s) | 922, 1067, 1239 |
| BmuI | ACTGGG | 2 cut(s) | 876, 1113 |
| BpiI | GAAGAC | 2 cut(s) | 311, 1419 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1358, 1390 |
| BpmI | CTGGAG | 2 cut(s) | 103, 1284 |
| Bpu10I | CCTNAGC | 3 cut(s) | 70, 266, 1512 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 903 |
| BpuMI | CCSGG | 1 cut(s) | 307 |
| Bsa29I | ATCGAT | 1 cut(s) | 1765 |
| BsaHI | GRCGYC | 2 cut(s) | 23, 1656 |
| BsaWI | WCCGGW | 3 cut(s) | 47, 236, 847 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 156, 321, 892 |
| Bse1I | ACTGG | 6 cut(s) | 315, 682, 871, 903, 1042, 1108 |
| Bse3DI | GCAATG | 1 cut(s) | 140 |
| BseAI | TCCGGA | 1 cut(s) | 47 |
| BseBI | CCWGG | 1 cut(s) | 151 |
| BseCI | ATCGAT | 1 cut(s) | 1765 |
| BseGI | GGATG | 8 cut(s) | 260, 702, 897, 1082, 1198, 1274, 1297, 1342 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 156, 321, 892 |
| BseMI | GCAATG | 1 cut(s) | 140 |
| BseNI | ACTGG | 6 cut(s) | 315, 682, 871, 903, 1042, 1108 |
| BseRI | GAGGAG | 3 cut(s) | 365, 823, 1500 |
| BseSI | GKGCMC | 1 cut(s) | 735 |
| BseXI | GCAGC | 4 cut(s) | 216, 839, 1034, 1599 |
| BseYI | CCCAGC | 1 cut(s) | 197 |
| BsgI | GTGCAG | 2 cut(s) | 410, 872 |
| BshFI | GGCC | 2 cut(s) | 139, 754 |
| BshVI | ATCGAT | 1 cut(s) | 1765 |
| BsiHKAI | GWGCWC | 3 cut(s) | 272, 735, 1349 |
| BsiSI | CCGG | 4 cut(s) | 48, 237, 307, 848 |
| BslFI | GGGAC | 3 cut(s) | 933, 1354, 1716 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 156, 321, 892 |
| BsmAI | GTCTC | 3 cut(s) | 372, 1295, 1378 |
| BsmFI | GGGAC | 3 cut(s) | 933, 1354, 1716 |
| BsmI | GAATGC | 1 cut(s) | 1256 |
| BsnI | GGCC | 2 cut(s) | 139, 754 |
| Bsp1286I | GDGCHC | 4 cut(s) | 272, 735, 1349, 1460 |
| Bsp13I | TCCGGA | 1 cut(s) | 47 |
| Bsp143I | GATC | 6 cut(s) | 175, 333, 1030, 1312, 1762, 1766 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 903 |
| BspACI | CCGC | 6 cut(s) | 201, 393, 825, 985, 1379, 1659 |
| BspANI | GGCC | 2 cut(s) | 139, 754 |
| BspDI | ATCGAT | 1 cut(s) | 1765 |
| BspEI | TCCGGA | 1 cut(s) | 47 |
| BspLI | GGNNCC | 4 cut(s) | 190, 948, 949, 1468 |
| BspMI | ACCTGC | 1 cut(s) | 1576 |
| BspPI | GGATC | 2 cut(s) | 1025, 1320 |
| BsrDI | GCAATG | 1 cut(s) | 140 |
| BsrI | ACTGG | 6 cut(s) | 315, 682, 871, 903, 1042, 1108 |
| BssMI | GATC | 6 cut(s) | 175, 333, 1030, 1312, 1762, 1766 |
| BssNI | GRCGYC | 2 cut(s) | 23, 1656 |
| Bst2UI | CCWGG | 1 cut(s) | 151 |
| Bst4CI | ACNGT | 6 cut(s) | 170, 517, 592, 737, 975, 1691 |
| Bst6I | CTCTTC | 4 cut(s) | 115, 800, 986, 1388 |
| BstACI | GRCGYC | 2 cut(s) | 23, 1656 |
| BstC8I | GCNNGC | 3 cut(s) | 89, 182, 1254 |
| BstF5I | GGATG | 8 cut(s) | 260, 702, 897, 1082, 1198, 1274, 1297, 1342 |
| BstKTI | GATC | 6 cut(s) | 178, 336, 1033, 1315, 1765, 1769 |
| BstMAI | GTCTC | 3 cut(s) | 372, 1295, 1378 |
| BstMBI | GATC | 6 cut(s) | 175, 333, 1030, 1312, 1762, 1766 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 186, 229, 707 |
| BstNI | CCWGG | 1 cut(s) | 151 |
| BstNSI | RCATGY | 2 cut(s) | 923, 1731 |
| BstSCI | CCNGG | 2 cut(s) | 149, 305 |
| BstSLI | GKGCMC | 1 cut(s) | 735 |
| BstV1I | GCAGC | 4 cut(s) | 216, 839, 1034, 1599 |
| BstV2I | GAAGAC | 2 cut(s) | 311, 1419 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 958 |
| Bsu15I | ATCGAT | 1 cut(s) | 1765 |
| BsuI | GTATCC | 1 cut(s) | 3 |
| BsuRI | GGCC | 2 cut(s) | 139, 754 |
| BsuTUI | ATCGAT | 1 cut(s) | 1765 |
| BtsCI | GGATG | 8 cut(s) | 260, 702, 897, 1082, 1198, 1274, 1297, 1342 |
| BtsI | GCAGTG | 2 cut(s) | 218, 422 |
| BtsIMutI | CAGTG | 8 cut(s) | 218, 422, 513, 742, 774, 896, 1224, 1414 |
| BveI | ACCTGC | 1 cut(s) | 1576 |
| Cac8I | GCNNGC | 3 cut(s) | 89, 182, 1254 |
| CaiI | CAGNNNCTG | 2 cut(s) | 424, 1684 |
| Cfr13I | GGNCC | 2 cut(s) | 170, 947 |
| ClaI | ATCGAT | 1 cut(s) | 1765 |
| CseI | GACGC | 2 cut(s) | 31, 1664 |
| Csp6I | GTAC | 3 cut(s) | 303, 412, 631 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 207, 242 |
| CviQI | GTAC | 3 cut(s) | 303, 412, 631 |
| DpnI | GATC | 6 cut(s) | 177, 335, 1032, 1314, 1764, 1768 |
| DpnII | GATC | 6 cut(s) | 175, 333, 1030, 1312, 1762, 1766 |
| DraI | TTTAAA | 2 cut(s) | 613, 748 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1661 |
| DriI | GACNNNNNGTC | 1 cut(s) | 129 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1661 |
| EaeI | YGGCCR | 1 cut(s) | 752 |
| Eam1104I | CTCTTC | 4 cut(s) | 115, 800, 986, 1388 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 129 |
| EarI | CTCTTC | 4 cut(s) | 115, 800, 986, 1388 |
| EciI | GGCGGA | 1 cut(s) | 974 |
| Ecl136II | GAGCTC | 1 cut(s) | 270 |
| Eco24I | GRGCYC | 2 cut(s) | 272, 1460 |
| Eco47I | GGWCC | 2 cut(s) | 170, 947 |
| Eco53kI | GAGCTC | 1 cut(s) | 270 |
| Eco57I | CTGAAG | 2 cut(s) | 401, 1390 |
| EcoICRI | GAGCTC | 1 cut(s) | 270 |
| EcoO109I | RGGNCCY | 1 cut(s) | 947 |
| EcoRII | CCWGG | 1 cut(s) | 149 |
| EcoT38I | GRGCYC | 2 cut(s) | 272, 1460 |
| FaqI | GGGAC | 3 cut(s) | 933, 1354, 1716 |
| FauI | CCCGC | 3 cut(s) | 194, 386, 1372 |
| Fnu4HI | GCNGC | 5 cut(s) | 230, 828, 1048, 1588, 1659 |
| FokI | GGATG | 8 cut(s) | 247, 709, 904, 1089, 1205, 1261, 1304, 1349 |
| FriOI | GRGCYC | 2 cut(s) | 272, 1460 |
| Fsp4HI | GCNGC | 5 cut(s) | 230, 828, 1048, 1588, 1659 |
| FspBI | CTAG | 5 cut(s) | 185, 711, 858, 1479, 1575 |
| GluI | GCNGC | 5 cut(s) | 230, 828, 1048, 1588, 1659 |
| GsaI | CCCAGC | 1 cut(s) | 201 |
| GsuI | CTGGAG | 2 cut(s) | 103, 1284 |
| HaeIII | GGCC | 2 cut(s) | 139, 754 |
| HapII | CCGG | 4 cut(s) | 48, 237, 307, 848 |
| HgaI | GACGC | 2 cut(s) | 31, 1664 |
| Hin1I | GRCGYC | 2 cut(s) | 23, 1656 |
| HincII | GTYRAC | 2 cut(s) | 660, 1101 |
| HindII | GTYRAC | 2 cut(s) | 660, 1101 |
| HindIII | AAGCTT | 2 cut(s) | 52, 89 |
| HpaII | CCGG | 4 cut(s) | 48, 237, 307, 848 |
| HphI | GGTGA | 3 cut(s) | 1129, 1226, 1760 |
| Hpy166II | GTNNAC | 4 cut(s) | 284, 660, 733, 1101 |
| Hpy8I | GTNNAC | 4 cut(s) | 284, 660, 733, 1101 |
| Hpy99I | CGWCG | 1 cut(s) | 25 |
| HpyAV | CCTTC | 6 cut(s) | 425, 712, 811, 1061, 1091, 1745 |
| HpyCH4III | ACNGT | 6 cut(s) | 170, 517, 592, 737, 975, 1691 |
| HpyCH4IV | ACGT | 1 cut(s) | 340 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 186, 229, 707 |
| HpySE526I | ACGT | 1 cut(s) | 340 |
| Hsp92I | GRCGYC | 2 cut(s) | 23, 1656 |
| KflI | GGGWCCC | 1 cut(s) | 947 |
| Kpn2I | TCCGGA | 1 cut(s) | 47 |
| Kzo9I | GATC | 6 cut(s) | 175, 333, 1030, 1312, 1762, 1766 |
| LmnI | GCTCC | 6 cut(s) | 84, 194, 275, 1265, 1384, 1681 |
| Lsp1109I | GCAGC | 4 cut(s) | 216, 839, 1034, 1599 |
| LweI | GCATC | 3 cut(s) | 922, 1067, 1239 |
| MaeI | CTAG | 5 cut(s) | 185, 711, 858, 1479, 1575 |
| MaeII | ACGT | 1 cut(s) | 340 |
| MaeIII | GTNAC | 3 cut(s) | 862, 975, 1201 |
| MalI | GATC | 6 cut(s) | 177, 335, 1032, 1314, 1764, 1768 |
| MboI | GATC | 6 cut(s) | 175, 333, 1030, 1312, 1762, 1766 |
| MfeI | CAATTG | 1 cut(s) | 913 |
| MhlI | GDGCHC | 4 cut(s) | 272, 735, 1349, 1460 |
| MlsI | TGGCCA | 1 cut(s) | 754 |
| MluNI | TGGCCA | 1 cut(s) | 754 |
| MlyI | GAGTC | 4 cut(s) | 139, 256, 1405, 1628 |
| MmeI | TCCRAC | 3 cut(s) | 44, 1058, 1494 |
| Mox20I | TGGCCA | 1 cut(s) | 754 |
| MroI | TCCGGA | 1 cut(s) | 47 |
| MscI | TGGCCA | 1 cut(s) | 754 |
| MseI | TTAA | 5 cut(s) | 612, 747, 801, 1059, 1488 |
| Msp20I | TGGCCA | 1 cut(s) | 754 |
| MspA1I | CMGCKG | 4 cut(s) | 201, 830, 1379, 1661 |
| MspI | CCGG | 4 cut(s) | 48, 237, 307, 848 |
| MspR9I | CCNGG | 2 cut(s) | 151, 307 |
| MunI | CAATTG | 1 cut(s) | 913 |
| Mva1269I | GAATGC | 1 cut(s) | 1256 |
| MvaI | CCWGG | 1 cut(s) | 151 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 186, 229, 707 |
| NciI | CCSGG | 1 cut(s) | 307 |
| NdeII | GATC | 6 cut(s) | 175, 333, 1030, 1312, 1762, 1766 |
| NlaIV | GGNNCC | 4 cut(s) | 190, 948, 949, 1468 |
| NmeAIII | GCCGAG | 1 cut(s) | 1213 |
| NmuCI | GTSAC | 1 cut(s) | 975 |
| NspI | RCATGY | 2 cut(s) | 923, 1731 |
| PctI | GAATGC | 1 cut(s) | 1256 |
| PfeI | GAWTC | 6 cut(s) | 437, 626, 821, 962, 1154, 1543 |
| PflFI | GACNNNGTC | 1 cut(s) | 1691 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 892 |
| PkrI | GCNGC | 5 cut(s) | 231, 829, 1049, 1589, 1660 |
| PleI | GAGTC | 4 cut(s) | 138, 255, 1404, 1628 |
| PpsI | GAGTC | 4 cut(s) | 138, 255, 1404, 1628 |
| PpuMI | RGGWCCY | 1 cut(s) | 947 |
| Psp124BI | GAGCTC | 1 cut(s) | 272 |
| Psp5II | RGGWCCY | 1 cut(s) | 947 |
| Psp6I | CCWGG | 1 cut(s) | 149 |
| PspFI | CCCAGC | 1 cut(s) | 197 |
| PspGI | CCWGG | 1 cut(s) | 149 |
| PspN4I | GGNNCC | 4 cut(s) | 190, 948, 949, 1468 |
| PspPI | GGNCC | 2 cut(s) | 170, 947 |
| PspPPI | RGGWCCY | 1 cut(s) | 947 |
| PstNI | CAGNNNCTG | 2 cut(s) | 424, 1684 |
| PsyI | GACNNNGTC | 1 cut(s) | 1691 |
| PvuII | CAGCTG | 1 cut(s) | 830 |
| RsaI | GTAC | 3 cut(s) | 304, 413, 632 |
| RsaNI | GTAC | 3 cut(s) | 303, 412, 631 |
| SacI | GAGCTC | 1 cut(s) | 272 |
| SaqAI | TTAA | 5 cut(s) | 612, 747, 801, 1059, 1488 |
| SatI | GCNGC | 5 cut(s) | 230, 828, 1048, 1588, 1659 |
| Sau3AI | GATC | 6 cut(s) | 175, 333, 1030, 1312, 1762, 1766 |
| Sau96I | GGNCC | 2 cut(s) | 170, 947 |
| SchI | GAGTC | 4 cut(s) | 139, 256, 1405, 1628 |
| ScrFI | CCNGG | 2 cut(s) | 151, 307 |
| SduI | GDGCHC | 4 cut(s) | 272, 735, 1349, 1460 |
| SfaNI | GCATC | 3 cut(s) | 922, 1067, 1239 |
| SinI | GGWCC | 2 cut(s) | 170, 947 |
| SmiI | ATTTAAAT | 1 cut(s) | 613 |
| SsiI | CCGC | 6 cut(s) | 201, 393, 825, 985, 1379, 1659 |
| SspMI | CTAG | 5 cut(s) | 185, 711, 858, 1479, 1575 |
| SstI | GAGCTC | 1 cut(s) | 272 |
| StyD4I | CCNGG | 2 cut(s) | 149, 305 |
| SwaI | ATTTAAAT | 1 cut(s) | 613 |
| TaaI | ACNGT | 6 cut(s) | 170, 517, 592, 737, 975, 1691 |
| TaiI | ACGT | 1 cut(s) | 343 |
| TaqI | TCGA | 4 cut(s) | 245, 336, 669, 1765 |
| TauI | GCSGC | 1 cut(s) | 1661 |
| TfiI | GAWTC | 6 cut(s) | 437, 626, 821, 962, 1154, 1543 |
| Tru1I | TTAA | 5 cut(s) | 612, 747, 801, 1059, 1488 |
| Tru9I | TTAA | 5 cut(s) | 612, 747, 801, 1059, 1488 |
| TscAI | CASTG | 8 cut(s) | 225, 429, 520, 742, 781, 903, 1231, 1414 |
| TseFI | GTSAC | 1 cut(s) | 975 |
| TseI | GCWGC | 4 cut(s) | 229, 827, 1047, 1587 |
| Tsp45I | GTSAC | 1 cut(s) | 975 |
| TspDTI | ATGAA | 6 cut(s) | 290, 629, 1212, 1406, 1410, 1722 |
| TspRI | CASTG | 8 cut(s) | 225, 429, 520, 742, 781, 903, 1231, 1414 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1691 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 892 |
| VneI | GTGCAC | 1 cut(s) | 731 |
| VpaK11BI | GGWCC | 2 cut(s) | 170, 947 |
| XapI | RAATTY | 1 cut(s) | 472 |
| XbaI | TCTAGA | 1 cut(s) | 857 |
| XceI | RCATGY | 2 cut(s) | 923, 1731 |
| XspI | CTAG | 5 cut(s) | 185, 711, 858, 1479, 1575 |