Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0004440

Physical Location & Seq

Genomic Coordinates Forward (+)

77866223 .. 77868979

Gene Structure 2757 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00139480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2757 bp

ATGGAGAAGAAGAGCAGCAAAAGAAGAAATGGGTCGGATTCAAACCCTTCAATTCTTCGAAAGCTTCATGAGAACAAGCTCAGGGAAGCTCTTGAGGAAGCTTCAGAAGATGGGTCTCTGTCCAAATCCCAGGACATGGAGTCTGAGACACTTGATCAAGACCAGGGTCAGGGTCTTGGTCTTGGACGGTCCAGATCGCTTGCCAGGCTCAATGCCCAGAGAGAGTTCCTGAGAGCCACTGCTCTTGCAGCTGAGCGTGTTTTCGAGTCTGAGGAGGACATCCCTGACCTCTATGAAGCCTTTGCTAAGTTCTGCACCATGTACCCGAAATTCATGTCGTCGGAGCAGATTGATCGGCTGAGGTTTGATGAGTACTCACATTTGGGAACCAAGGTATGCCTGGACTACTGTGGATTTGGCCTTTTTTCGTATATGCAGACATTGCATTATTGGGAGTCTTCTACATTTAGCTTGTCTGAGATAACTGCAAATTTGAATAACTATGCTCTTTATGGTGGTGCTGAGAAATGTACTATTGAGCATGATATAAAGACTAGGATTATGGATTATTTGAACATTCCTGAGAATGAGTATGGTCTTGTGTTTACTGTGAGTAGGGGGTCTGCTTTTAGATTGTTGGCTGAGTCGTACCCTTTTCATACAAACAAGAAGTTGTTGACCATGTTTGATTACGAAAGCCAATCTGTGAATTGGATGGCTCAGAGTGCTAGAGAGAAAGGTGCAAAGGTGCAGAGTGCCTGGTTTAAGTGGCCGAACCTGAAACTCTGCTCGACTGATTTGAGGAAGCAGATTTCAAACAAGAAAAGGAGGAAGAAGGATTCTGCGACGGGTCTTTTTGTGTTTCCTGTTCAGTCTAGAGTTACGGGGGCCAAGTATTCTTACCAGTGGATGGCACTGGCACAGCAGAATAATTGGCATGTGTTGCTTGATGCTGGGTCATTGGGTCCCAAGGACATGGATTCACTTGGGTTGTCCTTGTTCAGGCCTGATTTTATCATCACCTCGTTTTACAAGGTTTTCGGGTATGATCCAACTGGATTTGGATGCCTACTGATTAAGAAATCAGTTATTAGTTGCCTTCAAAGTCGGTCAGGGTCTACTGGGTCGGGAATGGTGAAGATTACCCCTGAATACCCGTTGTATTTGAGTGATTCTGGAGAAATTCTGGACAAGTTGGCTGGAAGTGAAGATGATGAAGTAGCTGGAAATAGTGAGAAAACCCCGGAAACTCGCCAGAGTTCGAAATTGCCTGCCTTCTCTGGAGTATACACGTCTGATCAGGTGAGGGATGTATTTGAAACTGAGATGGATCAGGATAACAGCTCTGACAGAGATGCAACTAGCACCATATTTGAAGAAGCTGAGAGTATTTCAGTAGGGGAGGTGATGAGGAGTCCAGTTTTCAGTGAAGACGAGTCATCAGACAATTCATTTTGGATTGATTTGGGTCAGAGCCCATTGGGCTCTGACCATTTAGGCCAGATCAATAAACAGAAAGTTGCATCTCCTTTGCCGCCATTTTGGTTGTCCGTCAGGACGAATCATAAGAAACTTACTCCAAAACCTACCTCTAAGATGTGCGGCAGCCCCGTATATGATGACAAAGAGGTTAACTCAGGGCCACACGATGACAATAATGGGCTATCATTTGATGCTGCTGTCCAATCAATTTCTCAGGAACTGGACTGTGTGAAGGAGGTCCTTGAAGAGAAATGCTTTGCAGAAACAAGTCCAGCTTCACAAAATTGTAGAAAGGGTTCCAATCTGCATGATAGGGAGATCGAGGAAAAATGTGAAAATTCAACTTCCACTTCTCAGCATCATAGACTAGCGAATGGTTCGCCATCAACTGCGGAAAGCTGCACAGAGAAAAGAGGTTGCGCCATAACAAGAGAAACTGAAGGTGAAAGTAGGTTGTTGGGCAGAAGGGAGGGGAGTAAATATACTAATGGTAGATTTTTTGGTTTGGAAGAGAGTGAACCACCTAACAGGGGGAGAGGGGTGTCCTTTAACATGGAAGATAACAGTAAAGATACCGTCAGTCATACTCTTGAGACGGGAGAAATATCCATGACTAGTCTGGAGGATGAAGATTACAGCAGTGATGGGGAATATGTTGATGGGCAAGATGGAGACAGGACAGAACCTGAGATAATATGCCGGCATCTTGATCAGATTAACACATTGGGCCTCAATAAAACCACCTCCCGTCTGCGCTTTTTGATTAATTGGCTTGTAACCTCATTGCTGCAATTACGGTTGCCTGGTTCAGACGGAGACAATGGAACTACACTGGTTCACATCTATGGCCCAAAAATAAAATATGAAAGGGGTGCAGCAGTGGCTTTCAATTTGAAAGACCGAAATGGAGGCCTTATAAATCCTGAAGTAGTTCAGAAGCTGGCTGAAAGAGATGGCATCTGTCTTGGCATTGGTTTCCTCAGTCACATACGAATCATGGATAGTTCGAGACATCAACAAGGGGCTCTGAATCTTCAAGATACTACCCTGTGCAGACCAATGGAAAATGCCAAGAATGATAAAAAGGGAAGGTTCGTAAGGGTTGAGGTAGTGACAGCTTCTCTGAGTTTCCTCACAAACTTTGATGATGTTTACAAGTTATGGGCTTTCGTAGCAAATTTTCTGAATCCATCCTTTATCAGAGATGGCGGGCTGTCTACTGTTGATGAAGAATCTGAGACGAAATCTGAAATCAATGACATTGTCCCAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00790 map00790

Pfam Domains

Protein Families

No domains found.

Protein Analysis

918

Amino Acids

102.77

Weight (kDa)

5.2

Isoelectric Point (pI)

50.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004440)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23520
fragaria_vesca	FvH4_1g14760
malus_domestica	MD02G1160700.v1.1 MD02G1160800.v1.1 MD15G1274900.v1.1
prunus_persica	Prupe.7G142800_v2.0.a1 Prupe.7G142900_v2.0.a1
pyrus_communis	pycom02g12670 pycom02g12680 pycom02g12690 pycom15g23800
rosa_chinensis	RchiOBHm_Chr2g0103691 RchiOBHm_Chr2g0103701
rosa_laevigata	RLG00000017249 RLG00000017250
rosa_multiflora	Rmu_sc0001852.1_g000009 Rmu_sc0001852.1_g000010
rosa_roxburghii	Rroxscaffold_2G00139470 Rroxscaffold_2G00139480 Rroxscaffold_5G00365360
rosa_rugosa	Rorug02G0116600 Rorug02G0116700
rosa_samantha	Rh2AG165300 Rh2AG165400 Rh2BG172500 Rh2BG172600 Rh2CG171400 Rh2CG171500 Rh2DG170900 Rh2DG171000
rosa_wichuraiana	Rw2G012950 Rw2G012960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2399
AccB7I	CCANNNNNTGG	2 cut(s)	136, 910
AccI	GTMKAC	3 cut(s)	1118, 1287, 2699
AciI	CCGC	4 cut(s)	1535, 1602, 1874, 2691
AclWI	GGATC	2 cut(s)	1043, 1338
AcoI	YGGCCR	1 cut(s)	770
AcsI	RAATTY	5 cut(s)	329, 490, 1182, 1819, 2659
AcuI	CTGAAG	3 cut(s)	87, 1941, 2427
AfaI	GTAC	4 cut(s)	323, 374, 532, 650
AfiI	CCNNNNNNNGG	5 cut(s)	136, 169, 910, 1002, 2012
AflIII	ACRYGT	1 cut(s)	1290
AhdI	GACNNNNNGTC	1 cut(s)	139
AhlI	ACTAGT	1 cut(s)	2096
AjiI	CACGTC	1 cut(s)	1293
AjnI	CCWGG	6 cut(s)	129, 162, 203, 399, 758, 2284
Alw26I	GTCTC	7 cut(s)	120, 140, 2069, 2148, 2292, 2485, 2714
AlwI	GGATC	2 cut(s)	1043, 1338
AlwNI	CAGNNNCTG	3 cut(s)	1702, 2168, 2422
AoxI	GGCC	9 cut(s)	418, 770, 888, 1004, 1498, 1640, 2209, 2329, 2392
ApeKI	GCWGC	7 cut(s)	15, 248, 1605, 1676, 1881, 2269, 2357
ApoI	RAATTY	5 cut(s)	329, 490, 1182, 1819, 2659
ArsI	GACNNNNNNTTYG	2 cut(s)	320, 352
AseI	ATTAAT	1 cut(s)	2247
Asp700I	GAANNNNTTC	2 cut(s)	1777, 2412
AspLEI	GCGC	2 cut(s)	1904, 2238
AspS9I	GGNCC	7 cut(s)	189, 888, 965, 1640, 1720, 2209, 2330
AsuC2I	CCSGG	1 cut(s)	1244
AsuHPI	GGTGA	5 cut(s)	1012, 1147, 1315, 1417, 1937
AsuII	TTCGAA	2 cut(s)	58, 1262
AvaII	GGWCC	3 cut(s)	189, 965, 1720
BanII	GRGCYC	3 cut(s)	1478, 1487, 2509
BbsI	GAAGAC	2 cut(s)	450, 1437
BbvCI	CCTCAGC	1 cut(s)	359
BbvI	GCAGC	7 cut(s)	27, 260, 1617, 1663, 1868, 2256, 2369
BcgI	CGANNNNNNTGC	2 cut(s)	335, 369
BciT130I	CCWGG	6 cut(s)	131, 164, 205, 401, 760, 2286
BclI	TGATCA	3 cut(s)	154, 1297, 2191
BcnI	CCSGG	1 cut(s)	1244
BcoDI	GTCTC	7 cut(s)	120, 140, 2069, 2148, 2292, 2485, 2714
BcuI	ACTAGT	1 cut(s)	2096
BfaI	CTAG	6 cut(s)	555, 729, 876, 1362, 1850, 2097
BglI	GCCNNNNNGGC	1 cut(s)	1482
BisI	GCNGC	9 cut(s)	16, 249, 1535, 1603, 1606, 1677, 1882, 2270, 2358
BlpI	GCTNAGC	1 cut(s)	252
BlsI	GCNGC	9 cut(s)	17, 250, 1536, 1604, 1607, 1678, 1883, 2271, 2359
BmcAI	AGTACT	1 cut(s)	374
Bme1390I	CCNGG	7 cut(s)	131, 164, 205, 401, 760, 1244, 2286
Bme18I	GGWCC	3 cut(s)	189, 965, 1720
BmeRI	GACNNNNNGTC	1 cut(s)	139
BmgBI	CACGTC	1 cut(s)	1293
BmgT120I	GGNCC	7 cut(s)	189, 888, 965, 1640, 1720, 2209, 2330
BmiI	GGNNCC	5 cut(s)	388, 889, 966, 967, 1780
BmrFI	CCNGG	7 cut(s)	131, 164, 205, 401, 760, 1244, 2286
BmrI	ACTGGG	1 cut(s)	1131
BmsI	GCATC	8 cut(s)	940, 1055, 1345, 1532, 1663, 1849, 2194, 2448
BmuI	ACTGGG	1 cut(s)	1131
BoxI	GACNNNNGTC	1 cut(s)	165
BpiI	GAAGAC	2 cut(s)	450, 1437
BplI	GAGNNNNNCTC	2 cut(s)	1619, 1651
BpmI	CTGGAG	3 cut(s)	1197, 1302, 2123
Bpu10I	CCTNAGC	2 cut(s)	80, 359
Bpu1102I	GCTNAGC	1 cut(s)	252
Bpu14I	TTCGAA	2 cut(s)	58, 1262
BpuEI	CTTGAG	2 cut(s)	113, 2093
BpuMI	CCSGG	1 cut(s)	1244
BsaI	GGTCTC	1 cut(s)	120
BsaJI	CCNNGG	5 cut(s)	129, 163, 390, 969, 1242
Bsc4I	CCNNNNNNNGG	5 cut(s)	136, 169, 910, 1002, 2012
Bse118I	RCCGGY	1 cut(s)	2181
Bse1I	ACTGG	7 cut(s)	904, 921, 1060, 1126, 1418, 1707, 2319
Bse3DI	GCAATG	2 cut(s)	440, 2264
BseBI	CCWGG	6 cut(s)	131, 164, 205, 401, 760, 2286
BseDI	CCNNGG	5 cut(s)	129, 163, 390, 969, 1242
BseGI	GGATG	7 cut(s)	279, 720, 915, 1070, 1315, 2113, 2672
BseLI	CCNNNNNNNGG	5 cut(s)	136, 169, 910, 1002, 2012
BseMI	GCAATG	2 cut(s)	440, 2264
BseNI	ACTGG	7 cut(s)	904, 921, 1060, 1126, 1418, 1707, 2319
BseRI	GAGGAG	2 cut(s)	287, 1426
BseXI	GCAGC	7 cut(s)	27, 260, 1617, 1663, 1868, 2256, 2369
BseYI	CCCAGC	1 cut(s)	953
BsgI	GTGCAG	5 cut(s)	298, 770, 1867, 2376, 2554
BshFI	GGCC	9 cut(s)	420, 772, 890, 1006, 1500, 1642, 2211, 2331, 2394
BsiSI	CCGG	2 cut(s)	1244, 2182
BslFI	GGGAC	2 cut(s)	951, 2732
BslI	CCNNNNNNNGG	5 cut(s)	136, 169, 910, 1002, 2012
BsmAI	GTCTC	7 cut(s)	120, 140, 2069, 2148, 2292, 2485, 2714
BsmBI	CGTCTC	2 cut(s)	2069, 2714
BsmFI	GGGAC	2 cut(s)	951, 2732
BsnI	GGCC	9 cut(s)	420, 772, 890, 1006, 1500, 1642, 2211, 2331, 2394
Bso31I	GGTCTC	1 cut(s)	120
Bsp119I	TTCGAA	2 cut(s)	58, 1262
Bsp1286I	GDGCHC	3 cut(s)	1478, 1487, 2509
Bsp143I	GATC	9 cut(s)	154, 194, 352, 1048, 1297, 1330, 1503, 1800, 2191
Bsp1720I	GCTNAGC	1 cut(s)	252
BspACI	CCGC	4 cut(s)	1535, 1602, 1874, 2691
BspANI	GGCC	9 cut(s)	420, 772, 890, 1006, 1500, 1642, 2211, 2331, 2394
BspHI	TCATGA	1 cut(s)	67
BspLI	GGNNCC	5 cut(s)	388, 889, 966, 967, 1780
BspPI	GGATC	2 cut(s)	1043, 1338
BspQI	GCTCTTC	1 cut(s)	5
BspT104I	TTCGAA	2 cut(s)	58, 1262
BspTNI	GGTCTC	1 cut(s)	120
BsrDI	GCAATG	2 cut(s)	440, 2264
BsrFI	RCCGGY	1 cut(s)	2181
BsrI	ACTGG	7 cut(s)	904, 921, 1060, 1126, 1418, 1707, 2319
BssAI	RCCGGY	1 cut(s)	2181
BssECI	CCNNGG	5 cut(s)	129, 163, 390, 969, 1242
BssMI	GATC	9 cut(s)	154, 194, 352, 1048, 1297, 1330, 1503, 1800, 2191
BssNAI	GTATAC	1 cut(s)	1288
BssT1I	CCWWGG	2 cut(s)	390, 969
Bst1107I	GTATAC	1 cut(s)	1288
Bst2UI	CCWGG	6 cut(s)	131, 164, 205, 401, 760, 2286
Bst4CI	ACNGT	8 cut(s)	189, 410, 610, 1709, 2048, 2059, 2280, 2704
Bst6I	CTCTTC	3 cut(s)	5, 1722, 1986
BstAPI	GCANNNNNTGC	2 cut(s)	442, 943
BstBI	TTCGAA	2 cut(s)	58, 1262
BstC8I	GCNNGC	5 cut(s)	201, 1272, 2183, 2424, 2693
BstENI	CCTNNNNNAGG	1 cut(s)	1000
BstF5I	GGATG	7 cut(s)	279, 720, 915, 1070, 1315, 2113, 2672
BstHHI	GCGC	2 cut(s)	1904, 2238
BstKTI	GATC	9 cut(s)	157, 197, 355, 1051, 1300, 1333, 1506, 1803, 2194
BstMAI	GTCTC	7 cut(s)	120, 140, 2069, 2148, 2292, 2485, 2714
BstMBI	GATC	9 cut(s)	154, 194, 352, 1048, 1297, 1330, 1503, 1800, 2191
BstMWI	GCNNNNNNNGC	8 cut(s)	205, 248, 442, 725, 943, 1482, 2363, 2654
BstNI	CCWGG	6 cut(s)	131, 164, 205, 401, 760, 2286
BstNSI	RCATGY	1 cut(s)	941
BstPAI	GACNNNNGTC	1 cut(s)	165
BstSCI	CCNGG	7 cut(s)	129, 162, 203, 399, 758, 1242, 2284
BstV1I	GCAGC	7 cut(s)	27, 260, 1617, 1663, 1868, 2256, 2369
BstV2I	GAAGAC	2 cut(s)	450, 1437
BstXI	CCANNNNNNTGG	1 cut(s)	976
BstZ17I	GTATAC	1 cut(s)	1288
BsuRI	GGCC	9 cut(s)	420, 772, 890, 1006, 1500, 1642, 2211, 2331, 2394
BtrI	CACGTC	1 cut(s)	1293
BtsCI	GGATG	7 cut(s)	279, 720, 915, 1070, 1315, 2113, 2672
BtsI	GCAGTG	3 cut(s)	237, 2128, 2367
BtsIMutI	CAGTG	7 cut(s)	237, 911, 914, 1432, 2128, 2312, 2367
Cac8I	GCNNGC	5 cut(s)	201, 1272, 2183, 2424, 2693
CaiI	CAGNNNCTG	3 cut(s)	1702, 2168, 2422
CciI	TCATGA	1 cut(s)	67
CfoI	GCGC	2 cut(s)	1904, 2238
Cfr10I	RCCGGY	1 cut(s)	2181
Cfr13I	GGNCC	7 cut(s)	189, 888, 965, 1640, 1720, 2209, 2330
Csp6I	GTAC	4 cut(s)	322, 373, 531, 649
CspCI	CAANNNNNGTGG	2 cut(s)	226, 261
CviQI	GTAC	4 cut(s)	322, 373, 531, 649
DpnI	GATC	9 cut(s)	156, 196, 354, 1050, 1299, 1332, 1505, 1802, 2193
DpnII	GATC	9 cut(s)	154, 194, 352, 1048, 1297, 1330, 1503, 1800, 2191
DriI	GACNNNNNGTC	1 cut(s)	139
EaeI	YGGCCR	1 cut(s)	770
Eam1104I	CTCTTC	3 cut(s)	5, 1722, 1986
Eam1105I	GACNNNNNGTC	1 cut(s)	139
EarI	CTCTTC	3 cut(s)	5, 1722, 1986
Eco130I	CCWWGG	2 cut(s)	390, 969
Eco147I	AGGCCT	2 cut(s)	1006, 2394
Eco24I	GRGCYC	3 cut(s)	1478, 1487, 2509
Eco31I	GGTCTC	1 cut(s)	120
Eco47I	GGWCC	3 cut(s)	189, 965, 1720
Eco57I	CTGAAG	3 cut(s)	87, 1941, 2427
EcoNI	CCTNNNNNAGG	1 cut(s)	1000
EcoO109I	RGGNCCY	2 cut(s)	965, 1720
EcoRII	CCWGG	6 cut(s)	129, 162, 203, 399, 758, 2284
EcoT14I	CCWWGG	2 cut(s)	390, 969
EcoT38I	GRGCYC	3 cut(s)	1478, 1487, 2509
ErhI	CCWWGG	2 cut(s)	390, 969
Esp3I	CGTCTC	2 cut(s)	2069, 2714
FalI	AAGNNNNNCTT	2 cut(s)	1741, 1773
FaqI	GGGAC	2 cut(s)	951, 2732
FauI	CCCGC	1 cut(s)	2684
FbaI	TGATCA	3 cut(s)	154, 1297, 2191
FblI	GTMKAC	3 cut(s)	1118, 1287, 2699
Fnu4HI	GCNGC	9 cut(s)	16, 249, 1535, 1603, 1606, 1677, 1882, 2270, 2358
FokI	GGATG	7 cut(s)	266, 727, 922, 1077, 1322, 2120, 2659
FriOI	GRGCYC	3 cut(s)	1478, 1487, 2509
Fsp4HI	GCNGC	9 cut(s)	16, 249, 1535, 1603, 1606, 1677, 1882, 2270, 2358
FspBI	CTAG	6 cut(s)	555, 729, 876, 1362, 1850, 2097
GlaI	GCGC	2 cut(s)	1903, 2237
GluI	GCNGC	9 cut(s)	16, 249, 1535, 1603, 1606, 1677, 1882, 2270, 2358
GsaI	CCCAGC	1 cut(s)	957
GsuI	CTGGAG	3 cut(s)	1197, 1302, 2123
HaeIII	GGCC	9 cut(s)	420, 772, 890, 1006, 1500, 1642, 2211, 2331, 2394
HapII	CCGG	2 cut(s)	1244, 2182
HhaI	GCGC	2 cut(s)	1904, 2238
Hin6I	GCGC	2 cut(s)	1902, 2236
HinP1I	GCGC	2 cut(s)	1902, 2236
HincII	GTYRAC	2 cut(s)	678, 1633
HindII	GTYRAC	2 cut(s)	678, 1633
HindIII	AAGCTT	2 cut(s)	62, 99
HpaI	GTTAAC	1 cut(s)	1633
HpaII	CCGG	2 cut(s)	1244, 2182
HphI	GGTGA	5 cut(s)	1012, 1147, 1315, 1417, 1937
Hpy166II	GTNNAC	9 cut(s)	606, 678, 1119, 1288, 1633, 2000, 2320, 2635, 2700
Hpy8I	GTNNAC	9 cut(s)	606, 678, 1119, 1288, 1633, 2000, 2320, 2635, 2700
Hpy99I	CGWCG	2 cut(s)	343, 850
HpyAV	CCTTC	8 cut(s)	57, 829, 1109, 1285, 1708, 1916, 1941, 2565
HpyCH4III	ACNGT	8 cut(s)	189, 410, 610, 1709, 2048, 2059, 2280, 2704
HpyCH4IV	ACGT	1 cut(s)	1292
HpyF10VI	GCNNNNNNNGC	8 cut(s)	205, 248, 442, 725, 943, 1482, 2363, 2654
HpySE526I	ACGT	1 cut(s)	1292
HspAI	GCGC	2 cut(s)	1902, 2236
KflI	GGGWCCC	1 cut(s)	965
KroI	GCCGGC	1 cut(s)	2181
KroNI	GCCGGC	1 cut(s)	2183
Ksp22I	TGATCA	3 cut(s)	154, 1297, 2191
KspAI	GTTAAC	1 cut(s)	1633
Kzo9I	GATC	9 cut(s)	154, 194, 352, 1048, 1297, 1330, 1503, 1800, 2191
LguI	GCTCTTC	1 cut(s)	5
LmnI	GCTCC	1 cut(s)	343
Lsp1109I	GCAGC	7 cut(s)	27, 260, 1617, 1663, 1868, 2256, 2369
LweI	GCATC	8 cut(s)	940, 1055, 1345, 1532, 1663, 1849, 2194, 2448
MaeI	CTAG	6 cut(s)	555, 729, 876, 1362, 1850, 2097
MaeII	ACGT	1 cut(s)	1292
MaeIII	GTNAC	4 cut(s)	880, 2257, 2465, 2593
MalI	GATC	9 cut(s)	156, 196, 354, 1050, 1299, 1332, 1505, 1802, 2193
MboI	GATC	9 cut(s)	154, 194, 352, 1048, 1297, 1330, 1503, 1800, 2191
MhlI	GDGCHC	3 cut(s)	1478, 1487, 2509
MlyI	GAGTC	6 cut(s)	149, 275, 464, 653, 1423, 1445
MmeI	TCCRAC	3 cut(s)	15, 321, 1076
MroNI	GCCGGC	1 cut(s)	2181
MroXI	GAANNNNTTC	2 cut(s)	1777, 2412
MseI	TTAA	6 cut(s)	765, 1077, 1632, 2031, 2199, 2247
MslI	CAYNNNNRTG	1 cut(s)	2325
MspA1I	CMGCKG	1 cut(s)	251
MspI	CCGG	2 cut(s)	1244, 2182
MspR9I	CCNGG	7 cut(s)	131, 164, 205, 401, 760, 1244, 2286
MvaI	CCWGG	6 cut(s)	131, 164, 205, 401, 760, 2286
MwoI	GCNNNNNNNGC	8 cut(s)	205, 248, 442, 725, 943, 1482, 2363, 2654
NaeI	GCCGGC	1 cut(s)	2183
NciI	CCSGG	1 cut(s)	1244
NdeII	GATC	9 cut(s)	154, 194, 352, 1048, 1297, 1330, 1503, 1800, 2191
NgoMIV	GCCGGC	1 cut(s)	2181
NlaIV	GGNNCC	5 cut(s)	388, 889, 966, 967, 1780
NmuCI	GTSAC	2 cut(s)	2465, 2593
NspI	RCATGY	1 cut(s)	941
NspV	TTCGAA	2 cut(s)	58, 1262
PagI	TCATGA	1 cut(s)	67
PceI	AGGCCT	2 cut(s)	1006, 2394
PciSI	GCTCTTC	1 cut(s)	5
PdiI	GCCGGC	1 cut(s)	2183
PdmI	GAANNNNTTC	2 cut(s)	1777, 2412
PfeI	GAWTC	9 cut(s)	38, 839, 980, 1172, 1561, 2475, 2512, 2668, 2714
PflFI	GACNNNGTC	1 cut(s)	2744
PflMI	CCANNNNNTGG	2 cut(s)	136, 910
PkrI	GCNGC	9 cut(s)	17, 250, 1536, 1604, 1607, 1678, 1883, 2271, 2359
PleI	GAGTC	6 cut(s)	148, 274, 463, 652, 1422, 1444
PpsI	GAGTC	6 cut(s)	148, 274, 463, 652, 1422, 1444
PpuMI	RGGWCCY	2 cut(s)	965, 1720
PshAI	GACNNNNGTC	1 cut(s)	165
PshBI	ATTAAT	1 cut(s)	2247
PsiI	TTATAA	1 cut(s)	2399
Psp5II	RGGWCCY	2 cut(s)	965, 1720
Psp6I	CCWGG	6 cut(s)	129, 162, 203, 399, 758, 2284
PspFI	CCCAGC	1 cut(s)	953
PspGI	CCWGG	6 cut(s)	129, 162, 203, 399, 758, 2284
PspN4I	GGNNCC	5 cut(s)	388, 889, 966, 967, 1780
PspPI	GGNCC	7 cut(s)	189, 888, 965, 1640, 1720, 2209, 2330
PspPPI	RGGWCCY	2 cut(s)	965, 1720
PsrI	GAACNNNNNNTAC	2 cut(s)	1762, 1794
PstNI	CAGNNNCTG	3 cut(s)	1702, 2168, 2422
PsyI	GACNNNGTC	1 cut(s)	2744
PvuII	CAGCTG	1 cut(s)	251
RsaI	GTAC	4 cut(s)	323, 374, 532, 650
RsaNI	GTAC	4 cut(s)	322, 373, 531, 649
RseI	CAYNNNNRTG	1 cut(s)	2325
SapI	GCTCTTC	1 cut(s)	5
SaqAI	TTAA	6 cut(s)	765, 1077, 1632, 2031, 2199, 2247
SatI	GCNGC	9 cut(s)	16, 249, 1535, 1603, 1606, 1677, 1882, 2270, 2358
Sau3AI	GATC	9 cut(s)	154, 194, 352, 1048, 1297, 1330, 1503, 1800, 2191
Sau96I	GGNCC	7 cut(s)	189, 888, 965, 1640, 1720, 2209, 2330
ScaI	AGTACT	1 cut(s)	374
SchI	GAGTC	6 cut(s)	149, 275, 464, 653, 1423, 1445
ScrFI	CCNGG	7 cut(s)	131, 164, 205, 401, 760, 1244, 2286
SduI	GDGCHC	3 cut(s)	1478, 1487, 2509
SfaNI	GCATC	8 cut(s)	940, 1055, 1345, 1532, 1663, 1849, 2194, 2448
SfuI	TTCGAA	2 cut(s)	58, 1262
SinI	GGWCC	3 cut(s)	189, 965, 1720
SmiMI	CAYNNNNRTG	1 cut(s)	2325
SmlI	CTYRAG	2 cut(s)	92, 2072
SmoI	CTYRAG	2 cut(s)	92, 2072
SpeI	ACTAGT	1 cut(s)	2096
SseBI	AGGCCT	2 cut(s)	1006, 2394
SsiI	CCGC	4 cut(s)	1535, 1602, 1874, 2691
SspMI	CTAG	6 cut(s)	555, 729, 876, 1362, 1850, 2097
StuI	AGGCCT	2 cut(s)	1006, 2394
StyD4I	CCNGG	7 cut(s)	129, 162, 203, 399, 758, 1242, 2284
StyI	CCWWGG	2 cut(s)	390, 969
TaaI	ACNGT	8 cut(s)	189, 410, 610, 1709, 2048, 2059, 2280, 2704
TaiI	ACGT	1 cut(s)	1295
TaqI	TCGA	6 cut(s)	58, 264, 791, 1262, 1803, 2489
TaqII	GACCGA	2 cut(s)	1098, 2397
TatI	WGTACW	2 cut(s)	372, 530
TauI	GCSGC	2 cut(s)	1537, 1605
TfiI	GAWTC	9 cut(s)	38, 839, 980, 1172, 1561, 2475, 2512, 2668, 2714
Tru1I	TTAA	6 cut(s)	765, 1077, 1632, 2031, 2199, 2247
Tru9I	TTAA	6 cut(s)	765, 1077, 1632, 2031, 2199, 2247
TscAI	CASTG	7 cut(s)	244, 911, 921, 1432, 2128, 2319, 2367
TseFI	GTSAC	2 cut(s)	2465, 2593
TseI	GCWGC	7 cut(s)	15, 248, 1605, 1676, 1881, 2269, 2357
Tsp45I	GTSAC	2 cut(s)	2465, 2593
TspDTI	ATGAA	9 cut(s)	56, 309, 322, 647, 1230, 1440, 2124, 2361, 2724
TspGWI	ACGGA	2 cut(s)	1540, 2310
TspRI	CASTG	7 cut(s)	244, 911, 921, 1432, 2128, 2319, 2367
Tth111I	GACNNNGTC	1 cut(s)	2744
Van91I	CCANNNNNTGG	2 cut(s)	136, 910
VpaK11BI	GGWCC	3 cut(s)	189, 965, 1720
VspI	ATTAAT	1 cut(s)	2247
XagI	CCTNNNNNAGG	1 cut(s)	1000
XapI	RAATTY	5 cut(s)	329, 490, 1182, 1819, 2659
XbaI	TCTAGA	1 cut(s)	875
XceI	RCATGY	1 cut(s)	941
XcmI	CCANNNNNNNNNTGG	2 cut(s)	397, 2098
XmiI	GTMKAC	3 cut(s)	1118, 1287, 2699
XmnI	GAANNNNTTC	2 cut(s)	1777, 2412
XspI	CTAG	6 cut(s)	555, 729, 876, 1362, 1850, 2097
ZrmI	AGTACT	1 cut(s)	374

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.