Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001852.1

Orthogroup ID

OG0004440

Physical Location & Seq

Genomic Coordinates Forward (+)

42089 .. 44839

Gene Structure 2751 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001852.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2751 bp

atggagaagaagagcagcaaaagaagaaatgggtcggattcaaacccttcaattcttcgaaagcttcatgaaaacaagctcagggaagctcttgaggaagcttcagaagatgggtctctgtccaaatcccaggacatggagtctgagacacttgatcaagaccagggtcttggtcttggacggtccagatcgcttgccaggctcaatgcccagagagagttcctgagagccactgctcttgcagctgagcgtgttttcgagtctgaggaggacatccctgacctctatgaagcctttgctaagttctgcaccatgtacccgaaattcatgtcgtcggagcagattgatcggctgaggtttgatgagtactcacatttgggaaccaaggtatgcctggactactgtggatttggccttttttcgtatatgcagacattgcattattgggagtcttctacatttagcttgtctgagattactgcaaatttgaataattatgctctttatggtggtgctgagaaatgtactattgagcatgatataaagactaggattatggattatttgaacattcctgagaatgagtatggtcttgtgtttactgtgagtagggggtctgcttttagattgttggctgagtcgtacccttttcatacaaacaagaagttgttgaccatgtttgattacgagagccagtctgtgaattggatggctcagagtgctagagagaaaggtgcaaaggtgcagagtgcctggtttaagtggccgaacttgaaactctgctcgactgatttgaggaagcagatttcgaacaagaaaaggaggaagagggattctgcgacaggtctttttgtgtttcctgttcagtctagagttacgggggccaagtattcttaccagtggatggcactggcacagcagaataattggcatgtgttgcttgatgctgggtcattgggtcccaaggacatggattcacttgggttgtccttgttcaggcctgattttatcatcacctcgttttacaaggttttcgggtatgatccaactggatttggatgcctactgattaagaaatcagttattagttgccttcaaagtcggtcaggatctactgggtcgggaatggtgaagattacccctgaatacccgttgtatttgagtgattctggagaaattctggacaagttggctggaagtgaagatgatgaagtagctggaaatagtgagaaaaccccggaaactcgccagagttcgaaattgcctgccttctctggagtatacacgtctgatcaggtgagggatgtatttgaaactgagatggatcaggataacagctctgacagagatgcaactagcaccatatttgaagaagctgagagtatttcagtaggggaggtgatgaggagtccagttttcagtgaagacgagtcatcagacaattcattttggattgatttgggtcagagcccaatgggatctgaccattcaggccagatcagcaaacagaaagttgcatctcctttgccgccattttggttgtctgtcaggacgaatcataagaaactttctccgaaacctacctctaagatgtgtggcagcctcgtatatgatgacaaagaggttaactcagggccacatgatgacactaatgggctatcatttgatgccgctgtccaatcaatttctcaggaactggactatgtgaaggaggtccctgaagagagatgctttgcagaaacaagtccagcttcacaaaattgtagaaagggttccaatctgcatgataggaagatcgagaaagaatgtgaaaattcaacttccacttctcagcatcatagactagcgaatggtttgccatcaactggggaaagctgcacagagaaaagaggttgcgccataacaagagaaactgaaggtgaaagtaggttgttgggcagaagggaggggagtaaatatgctaatggtagattttttggtttggaagagagtgaaccacctaacagggggagaggggtatcctttagcatggaagataacagtaaagataccgtcagtcatactcttgagacgggagaaatatctgtgactagtctggaggatgaagattacagcagtgatggggaatatgttgatgggcaagatggagacaggacagaacctgagataatatgccggcatcttgatcagattaacacattgggcctcaataaaaccacctcccgtctgcgctttttgattaattggcttgtaacctcattgctgcaattacggttgcctggttcagacggagacaatggaactacactggttcacatctatggcccaaaaataaaatatgaaaggggtgcagcagtggctttcaatgtgaaagaccaaaatggaggccttataaatcctgaagtagttcagaagctggctgaaagagatggcatctgtcttggcattggtttcctcagtcacatacgaatcatggatagtttgagacatcaacaaggggctctgaatcttcaagatactaccctgtgcagaccaatggaaaatgccaagaatgataaaaagggatggtctgtaagggttgaggtagtgacagcttctctgagtttcctcacgaactttgatgatgtttacaagttatgggctttcgtagcaaattttctgaatccatcctttatcagagatggtgggctgtctactgttgatgaagaatctgagacgaaatctgaaatcaatgacattatcccaaattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00790 map00790

Pfam Domains

Protein Families

No domains found.

Protein Analysis

916

Amino Acids

102.53

Weight (kDa)

5.2

Isoelectric Point (pI)

50.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004440)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23520
fragaria_vesca	FvH4_1g14760
malus_domestica	MD02G1160700.v1.1 MD02G1160800.v1.1 MD15G1274900.v1.1
prunus_persica	Prupe.7G142800_v2.0.a1 Prupe.7G142900_v2.0.a1
pyrus_communis	pycom02g12670 pycom02g12680 pycom02g12690 pycom15g23800
rosa_chinensis	RchiOBHm_Chr2g0103691 RchiOBHm_Chr2g0103701
rosa_laevigata	RLG00000017249 RLG00000017250
rosa_multiflora	Rmu_sc0001852.1_g000009 Rmu_sc0001852.1_g000010
rosa_roxburghii	Rroxscaffold_2G00139470 Rroxscaffold_2G00139480 Rroxscaffold_5G00365360
rosa_rugosa	Rorug02G0116600 Rorug02G0116700
rosa_samantha	Rh2AG165300 Rh2AG165400 Rh2BG172500 Rh2BG172600 Rh2CG171400 Rh2CG171500 Rh2DG170900 Rh2DG171000
rosa_wichuraiana	Rw2G012950 Rw2G012960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2393
AccB7I	CCANNNNNTGG	3 cut(s)	136, 904, 1865
AccI	GTMKAC	2 cut(s)	1281, 2693
AciI	CCGC	2 cut(s)	1529, 1671
AclWI	GGATC	4 cut(s)	1037, 1117, 1332, 1486
AcoI	YGGCCR	1 cut(s)	764
AcsI	RAATTY	5 cut(s)	323, 484, 1176, 1813, 2653
AcuI	CTGAAG	4 cut(s)	87, 1740, 1935, 2421
AfaI	GTAC	4 cut(s)	317, 368, 526, 644
AfiI	CCNNNNNNNGG	5 cut(s)	136, 904, 996, 1865, 2006
AflIII	ACRYGT	1 cut(s)	1284
AhdI	GACNNNNNGTC	1 cut(s)	139
AhlI	ACTAGT	1 cut(s)	2090
AjiI	CACGTC	1 cut(s)	1287
AjnI	CCWGG	6 cut(s)	129, 162, 197, 393, 752, 2278
Alw26I	GTCTC	7 cut(s)	120, 140, 2063, 2142, 2286, 2479, 2708
AlwI	GGATC	4 cut(s)	1037, 1117, 1332, 1486
AlwNI	CAGNNNCTG	3 cut(s)	1696, 2162, 2416
AoxI	GGCC	9 cut(s)	412, 764, 882, 998, 1492, 1634, 2203, 2323, 2386
ApeKI	GCWGC	6 cut(s)	15, 242, 1599, 1875, 2263, 2351
ApoI	RAATTY	5 cut(s)	323, 484, 1176, 1813, 2653
ArsI	GACNNNNNNTTYG	2 cut(s)	314, 346
AseI	ATTAAT	1 cut(s)	2241
Asp700I	GAANNNNTTC	2 cut(s)	1771, 2406
AspLEI	GCGC	2 cut(s)	1898, 2232
AspS9I	GGNCC	7 cut(s)	183, 882, 959, 1634, 1714, 2203, 2324
AsuC2I	CCSGG	1 cut(s)	1238
AsuHPI	GGTGA	5 cut(s)	1006, 1141, 1309, 1411, 1931
AsuII	TTCGAA	3 cut(s)	58, 809, 1256
AvaII	GGWCC	3 cut(s)	183, 959, 1714
BanII	GRGCYC	2 cut(s)	1472, 2503
BbsI	GAAGAC	2 cut(s)	444, 1431
BbvCI	CCTCAGC	1 cut(s)	353
BbvI	GCAGC	6 cut(s)	27, 254, 1611, 1862, 2250, 2363
BcgI	CGANNNNNNTGC	4 cut(s)	329, 363, 1837, 1871
BciT130I	CCWGG	6 cut(s)	131, 164, 199, 395, 754, 2280
BciVI	GTATCC	1 cut(s)	2029
BclI	TGATCA	3 cut(s)	154, 1291, 2185
BcnI	CCSGG	1 cut(s)	1238
BcoDI	GTCTC	7 cut(s)	120, 140, 2063, 2142, 2286, 2479, 2708
BcuI	ACTAGT	1 cut(s)	2090
BfaI	CTAG	6 cut(s)	549, 723, 870, 1356, 1844, 2091
BfuI	GTATCC	1 cut(s)	2029
BisI	GCNGC	8 cut(s)	16, 243, 1529, 1600, 1671, 1876, 2264, 2352
BlpI	GCTNAGC	1 cut(s)	246
BlsI	GCNGC	8 cut(s)	17, 244, 1530, 1601, 1672, 1877, 2265, 2353
BmcAI	AGTACT	1 cut(s)	368
Bme1390I	CCNGG	7 cut(s)	131, 164, 199, 395, 754, 1238, 2280
Bme18I	GGWCC	3 cut(s)	183, 959, 1714
BmeRI	GACNNNNNGTC	1 cut(s)	139
BmgBI	CACGTC	1 cut(s)	1287
BmgT120I	GGNCC	7 cut(s)	183, 882, 959, 1634, 1714, 2203, 2324
BmiI	GGNNCC	6 cut(s)	382, 883, 960, 961, 1716, 1774
BmrFI	CCNGG	7 cut(s)	131, 164, 199, 395, 754, 1238, 2280
BmrI	ACTGGG	2 cut(s)	1125, 1875
BmsI	GCATC	9 cut(s)	934, 1049, 1339, 1526, 1657, 1718, 1843, 2188, 2442
BmuI	ACTGGG	2 cut(s)	1125, 1875
BoxI	GACNNNNGTC	1 cut(s)	165
BpiI	GAAGAC	2 cut(s)	444, 1431
BplI	GAGNNNNNCTC	2 cut(s)	1613, 1645
BpmI	CTGGAG	3 cut(s)	1191, 1296, 2117
Bpu10I	CCTNAGC	2 cut(s)	80, 353
Bpu1102I	GCTNAGC	1 cut(s)	246
Bpu14I	TTCGAA	3 cut(s)	58, 809, 1256
BpuEI	CTTGAG	2 cut(s)	113, 2087
BpuMI	CCSGG	1 cut(s)	1238
BsaI	GGTCTC	1 cut(s)	120
BsaJI	CCNNGG	5 cut(s)	129, 163, 384, 963, 1236
Bsc4I	CCNNNNNNNGG	5 cut(s)	136, 904, 996, 1865, 2006
Bse118I	RCCGGY	1 cut(s)	2175
Bse1I	ACTGG	9 cut(s)	694, 898, 915, 1054, 1120, 1412, 1701, 1870, 2313
Bse3DI	GCAATG	2 cut(s)	434, 2258
BseBI	CCWGG	6 cut(s)	131, 164, 199, 395, 754, 2280
BseDI	CCNNGG	5 cut(s)	129, 163, 384, 963, 1236
BseGI	GGATG	8 cut(s)	273, 714, 909, 1064, 1309, 2107, 2570, 2666
BseLI	CCNNNNNNNGG	5 cut(s)	136, 904, 996, 1865, 2006
BseMI	GCAATG	2 cut(s)	434, 2258
BseNI	ACTGG	9 cut(s)	694, 898, 915, 1054, 1120, 1412, 1701, 1870, 2313
BseRI	GAGGAG	2 cut(s)	281, 1420
BseXI	GCAGC	6 cut(s)	27, 254, 1611, 1862, 2250, 2363
BseYI	CCCAGC	1 cut(s)	947
BsgI	GTGCAG	5 cut(s)	292, 764, 1861, 2370, 2548
BshFI	GGCC	9 cut(s)	414, 766, 884, 1000, 1494, 1636, 2205, 2325, 2388
BsiSI	CCGG	2 cut(s)	1238, 2176
BslFI	GGGAC	2 cut(s)	945, 1700
BslI	CCNNNNNNNGG	5 cut(s)	136, 904, 996, 1865, 2006
BsmAI	GTCTC	7 cut(s)	120, 140, 2063, 2142, 2286, 2479, 2708
BsmBI	CGTCTC	2 cut(s)	2063, 2708
BsmFI	GGGAC	2 cut(s)	945, 1700
BsnI	GGCC	9 cut(s)	414, 766, 884, 1000, 1494, 1636, 2205, 2325, 2388
Bso31I	GGTCTC	1 cut(s)	120
Bsp119I	TTCGAA	3 cut(s)	58, 809, 1256
Bsp1286I	GDGCHC	2 cut(s)	1472, 2503
Bsp1720I	GCTNAGC	1 cut(s)	246
BspACI	CCGC	2 cut(s)	1529, 1671
BspANI	GGCC	9 cut(s)	414, 766, 884, 1000, 1494, 1636, 2205, 2325, 2388
BspHI	TCATGA	1 cut(s)	67
BspLI	GGNNCC	6 cut(s)	382, 883, 960, 961, 1716, 1774
BspPI	GGATC	4 cut(s)	1037, 1117, 1332, 1486
BspQI	GCTCTTC	1 cut(s)	5
BspT104I	TTCGAA	3 cut(s)	58, 809, 1256
BspTNI	GGTCTC	1 cut(s)	120
BsrDI	GCAATG	2 cut(s)	434, 2258
BsrFI	RCCGGY	1 cut(s)	2175
BsrI	ACTGG	9 cut(s)	694, 898, 915, 1054, 1120, 1412, 1701, 1870, 2313
BssAI	RCCGGY	1 cut(s)	2175
BssECI	CCNNGG	5 cut(s)	129, 163, 384, 963, 1236
BssNAI	GTATAC	1 cut(s)	1282
BssT1I	CCWWGG	2 cut(s)	384, 963
Bst1107I	GTATAC	1 cut(s)	1282
Bst2UI	CCWGG	6 cut(s)	131, 164, 199, 395, 754, 2280
Bst4CI	ACNGT	7 cut(s)	183, 404, 604, 2042, 2053, 2274, 2698
Bst6I	CTCTTC	4 cut(s)	5, 821, 1716, 1980
BstAPI	GCANNNNNTGC	2 cut(s)	436, 937
BstBI	TTCGAA	3 cut(s)	58, 809, 1256
BstC8I	GCNNGC	4 cut(s)	195, 1266, 2177, 2418
BstENI	CCTNNNNNAGG	1 cut(s)	994
BstF5I	GGATG	8 cut(s)	273, 714, 909, 1064, 1309, 2107, 2570, 2666
BstHHI	GCGC	2 cut(s)	1898, 2232
BstMAI	GTCTC	7 cut(s)	120, 140, 2063, 2142, 2286, 2479, 2708
BstMWI	GCNNNNNNNGC	8 cut(s)	199, 242, 436, 719, 937, 1500, 2357, 2648
BstNI	CCWGG	6 cut(s)	131, 164, 199, 395, 754, 2280
BstNSI	RCATGY	1 cut(s)	935
BstPAI	GACNNNNGTC	1 cut(s)	165
BstSCI	CCNGG	7 cut(s)	129, 162, 197, 393, 752, 1236, 2278
BstV1I	GCAGC	6 cut(s)	27, 254, 1611, 1862, 2250, 2363
BstV2I	GAAGAC	2 cut(s)	444, 1431
BstX2I	RGATCY	2 cut(s)	1109, 1478
BstXI	CCANNNNNNTGG	2 cut(s)	170, 970
BstYI	RGATCY	2 cut(s)	1109, 1478
BstZ17I	GTATAC	1 cut(s)	1282
BsuI	GTATCC	1 cut(s)	2029
BsuRI	GGCC	9 cut(s)	414, 766, 884, 1000, 1494, 1636, 2205, 2325, 2388
BtrI	CACGTC	1 cut(s)	1287
BtsCI	GGATG	8 cut(s)	273, 714, 909, 1064, 1309, 2107, 2570, 2666
BtsI	GCAGTG	3 cut(s)	231, 2122, 2361
BtsIMutI	CAGTG	7 cut(s)	231, 905, 908, 1426, 2122, 2306, 2361
Cac8I	GCNNGC	4 cut(s)	195, 1266, 2177, 2418
CaiI	CAGNNNCTG	3 cut(s)	1696, 2162, 2416
CciI	TCATGA	1 cut(s)	67
CfoI	GCGC	2 cut(s)	1898, 2232
Cfr10I	RCCGGY	1 cut(s)	2175
Cfr13I	GGNCC	7 cut(s)	183, 882, 959, 1634, 1714, 2203, 2324
Csp6I	GTAC	4 cut(s)	316, 367, 525, 643
CspCI	CAANNNNNGTGG	2 cut(s)	220, 255
CviQI	GTAC	4 cut(s)	316, 367, 525, 643
DriI	GACNNNNNGTC	1 cut(s)	139
EaeI	YGGCCR	1 cut(s)	764
Eam1104I	CTCTTC	4 cut(s)	5, 821, 1716, 1980
Eam1105I	GACNNNNNGTC	1 cut(s)	139
EarI	CTCTTC	4 cut(s)	5, 821, 1716, 1980
Eco130I	CCWWGG	2 cut(s)	384, 963
Eco147I	AGGCCT	2 cut(s)	1000, 2388
Eco24I	GRGCYC	2 cut(s)	1472, 2503
Eco31I	GGTCTC	1 cut(s)	120
Eco47I	GGWCC	3 cut(s)	183, 959, 1714
Eco57I	CTGAAG	4 cut(s)	87, 1740, 1935, 2421
EcoNI	CCTNNNNNAGG	1 cut(s)	994
EcoO109I	RGGNCCY	2 cut(s)	959, 1714
EcoRII	CCWGG	6 cut(s)	129, 162, 197, 393, 752, 2278
EcoT14I	CCWWGG	2 cut(s)	384, 963
EcoT38I	GRGCYC	2 cut(s)	1472, 2503
ErhI	CCWWGG	2 cut(s)	384, 963
Esp3I	CGTCTC	2 cut(s)	2063, 2708
FalI	AAGNNNNNCTT	2 cut(s)	1735, 1767
FaqI	GGGAC	2 cut(s)	945, 1700
FbaI	TGATCA	3 cut(s)	154, 1291, 2185
FblI	GTMKAC	2 cut(s)	1281, 2693
Fnu4HI	GCNGC	8 cut(s)	16, 243, 1529, 1600, 1671, 1876, 2264, 2352
FokI	GGATG	8 cut(s)	260, 721, 916, 1071, 1316, 2114, 2577, 2653
FriOI	GRGCYC	2 cut(s)	1472, 2503
Fsp4HI	GCNGC	8 cut(s)	16, 243, 1529, 1600, 1671, 1876, 2264, 2352
FspBI	CTAG	6 cut(s)	549, 723, 870, 1356, 1844, 2091
GlaI	GCGC	2 cut(s)	1897, 2231
GluI	GCNGC	8 cut(s)	16, 243, 1529, 1600, 1671, 1876, 2264, 2352
GsaI	CCCAGC	1 cut(s)	951
GsuI	CTGGAG	3 cut(s)	1191, 1296, 2117
HaeIII	GGCC	9 cut(s)	414, 766, 884, 1000, 1494, 1636, 2205, 2325, 2388
HapII	CCGG	2 cut(s)	1238, 2176
HhaI	GCGC	2 cut(s)	1898, 2232
Hin6I	GCGC	2 cut(s)	1896, 2230
HinP1I	GCGC	2 cut(s)	1896, 2230
HincII	GTYRAC	2 cut(s)	672, 1627
HindII	GTYRAC	2 cut(s)	672, 1627
HindIII	AAGCTT	2 cut(s)	62, 99
HpaI	GTTAAC	1 cut(s)	1627
HpaII	CCGG	2 cut(s)	1238, 2176
HphI	GGTGA	5 cut(s)	1006, 1141, 1309, 1411, 1931
Hpy166II	GTNNAC	8 cut(s)	600, 672, 1282, 1627, 1994, 2314, 2629, 2694
Hpy8I	GTNNAC	8 cut(s)	600, 672, 1282, 1627, 1994, 2314, 2629, 2694
Hpy99I	CGWCG	1 cut(s)	337
HpyAV	CCTTC	6 cut(s)	57, 1103, 1279, 1702, 1910, 1935
HpyCH4III	ACNGT	7 cut(s)	183, 404, 604, 2042, 2053, 2274, 2698
HpyCH4IV	ACGT	1 cut(s)	1286
HpyF10VI	GCNNNNNNNGC	8 cut(s)	199, 242, 436, 719, 937, 1500, 2357, 2648
HpySE526I	ACGT	1 cut(s)	1286
HspAI	GCGC	2 cut(s)	1896, 2230
KflI	GGGWCCC	1 cut(s)	959
KroI	GCCGGC	1 cut(s)	2175
KroNI	GCCGGC	1 cut(s)	2177
Ksp22I	TGATCA	3 cut(s)	154, 1291, 2185
KspAI	GTTAAC	1 cut(s)	1627
LguI	GCTCTTC	1 cut(s)	5
LmnI	GCTCC	1 cut(s)	337
Lsp1109I	GCAGC	6 cut(s)	27, 254, 1611, 1862, 2250, 2363
LweI	GCATC	9 cut(s)	934, 1049, 1339, 1526, 1657, 1718, 1843, 2188, 2442
MaeI	CTAG	6 cut(s)	549, 723, 870, 1356, 1844, 2091
MaeII	ACGT	1 cut(s)	1286
MaeIII	GTNAC	5 cut(s)	874, 2086, 2251, 2459, 2587
MflI	RGATCY	2 cut(s)	1109, 1478
MhlI	GDGCHC	2 cut(s)	1472, 2503
MlyI	GAGTC	6 cut(s)	149, 269, 458, 647, 1417, 1439
MmeI	TCCRAC	3 cut(s)	15, 315, 1070
MroNI	GCCGGC	1 cut(s)	2175
MroXI	GAANNNNTTC	2 cut(s)	1771, 2406
MseI	TTAA	5 cut(s)	759, 1071, 1626, 2193, 2241
MslI	CAYNNNNRTG	1 cut(s)	2319
MspA1I	CMGCKG	2 cut(s)	245, 1673
MspI	CCGG	2 cut(s)	1238, 2176
MspR9I	CCNGG	7 cut(s)	131, 164, 199, 395, 754, 1238, 2280
MvaI	CCWGG	6 cut(s)	131, 164, 199, 395, 754, 2280
MwoI	GCNNNNNNNGC	8 cut(s)	199, 242, 436, 719, 937, 1500, 2357, 2648
NaeI	GCCGGC	1 cut(s)	2177
NciI	CCSGG	1 cut(s)	1238
NgoMIV	GCCGGC	1 cut(s)	2175
NlaIV	GGNNCC	6 cut(s)	382, 883, 960, 961, 1716, 1774
NmuCI	GTSAC	3 cut(s)	2086, 2459, 2587
NspI	RCATGY	1 cut(s)	935
NspV	TTCGAA	3 cut(s)	58, 809, 1256
PagI	TCATGA	1 cut(s)	67
PceI	AGGCCT	2 cut(s)	1000, 2388
PciSI	GCTCTTC	1 cut(s)	5
PdiI	GCCGGC	1 cut(s)	2177
PdmI	GAANNNNTTC	2 cut(s)	1771, 2406
PfeI	GAWTC	9 cut(s)	38, 833, 974, 1166, 1555, 2469, 2506, 2662, 2708
PflMI	CCANNNNNTGG	3 cut(s)	136, 904, 1865
PkrI	GCNGC	8 cut(s)	17, 244, 1530, 1601, 1672, 1877, 2265, 2353
PleI	GAGTC	6 cut(s)	148, 268, 457, 646, 1416, 1438
PpsI	GAGTC	6 cut(s)	148, 268, 457, 646, 1416, 1438
PpuMI	RGGWCCY	2 cut(s)	959, 1714
PshAI	GACNNNNGTC	1 cut(s)	165
PshBI	ATTAAT	1 cut(s)	2241
PsiI	TTATAA	1 cut(s)	2393
Psp5II	RGGWCCY	2 cut(s)	959, 1714
Psp6I	CCWGG	6 cut(s)	129, 162, 197, 393, 752, 2278
PspFI	CCCAGC	1 cut(s)	947
PspGI	CCWGG	6 cut(s)	129, 162, 197, 393, 752, 2278
PspN4I	GGNNCC	6 cut(s)	382, 883, 960, 961, 1716, 1774
PspPI	GGNCC	7 cut(s)	183, 882, 959, 1634, 1714, 2203, 2324
PspPPI	RGGWCCY	2 cut(s)	959, 1714
PsrI	GAACNNNNNNTAC	2 cut(s)	1756, 1788
PstNI	CAGNNNCTG	3 cut(s)	1696, 2162, 2416
PsuI	RGATCY	2 cut(s)	1109, 1478
PvuII	CAGCTG	1 cut(s)	245
RsaI	GTAC	4 cut(s)	317, 368, 526, 644
RsaNI	GTAC	4 cut(s)	316, 367, 525, 643
RseI	CAYNNNNRTG	1 cut(s)	2319
SapI	GCTCTTC	1 cut(s)	5
SaqAI	TTAA	5 cut(s)	759, 1071, 1626, 2193, 2241
SatI	GCNGC	8 cut(s)	16, 243, 1529, 1600, 1671, 1876, 2264, 2352
Sau96I	GGNCC	7 cut(s)	183, 882, 959, 1634, 1714, 2203, 2324
ScaI	AGTACT	1 cut(s)	368
SchI	GAGTC	6 cut(s)	149, 269, 458, 647, 1417, 1439
ScrFI	CCNGG	7 cut(s)	131, 164, 199, 395, 754, 1238, 2280
SduI	GDGCHC	2 cut(s)	1472, 2503
SfaNI	GCATC	9 cut(s)	934, 1049, 1339, 1526, 1657, 1718, 1843, 2188, 2442
SfuI	TTCGAA	3 cut(s)	58, 809, 1256
SinI	GGWCC	3 cut(s)	183, 959, 1714
SmiMI	CAYNNNNRTG	1 cut(s)	2319
SmlI	CTYRAG	2 cut(s)	92, 2066
SmoI	CTYRAG	2 cut(s)	92, 2066
SpeI	ACTAGT	1 cut(s)	2090
SseBI	AGGCCT	2 cut(s)	1000, 2388
SsiI	CCGC	2 cut(s)	1529, 1671
SspMI	CTAG	6 cut(s)	549, 723, 870, 1356, 1844, 2091
StuI	AGGCCT	2 cut(s)	1000, 2388
StyD4I	CCNGG	7 cut(s)	129, 162, 197, 393, 752, 1236, 2278
StyI	CCWWGG	2 cut(s)	384, 963
TaaI	ACNGT	7 cut(s)	183, 404, 604, 2042, 2053, 2274, 2698
TaiI	ACGT	1 cut(s)	1289
TaqI	TCGA	6 cut(s)	58, 258, 785, 809, 1256, 1797
TaqII	GACCGA	1 cut(s)	1092
TatI	WGTACW	2 cut(s)	366, 524
TauI	GCSGC	2 cut(s)	1531, 1673
TfiI	GAWTC	9 cut(s)	38, 833, 974, 1166, 1555, 2469, 2506, 2662, 2708
Tru1I	TTAA	5 cut(s)	759, 1071, 1626, 2193, 2241
Tru9I	TTAA	5 cut(s)	759, 1071, 1626, 2193, 2241
TscAI	CASTG	7 cut(s)	238, 905, 915, 1426, 2122, 2313, 2361
TseFI	GTSAC	3 cut(s)	2086, 2459, 2587
TseI	GCWGC	6 cut(s)	15, 242, 1599, 1875, 2263, 2351
Tsp45I	GTSAC	3 cut(s)	2086, 2459, 2587
TspGWI	ACGGA	1 cut(s)	2304
TspRI	CASTG	7 cut(s)	238, 905, 915, 1426, 2122, 2313, 2361
Van91I	CCANNNNNTGG	3 cut(s)	136, 904, 1865
VpaK11BI	GGWCC	3 cut(s)	183, 959, 1714
VspI	ATTAAT	1 cut(s)	2241
XagI	CCTNNNNNAGG	1 cut(s)	994
XapI	RAATTY	5 cut(s)	323, 484, 1176, 1813, 2653
XbaI	TCTAGA	1 cut(s)	869
XceI	RCATGY	1 cut(s)	935
XcmI	CCANNNNNNNNNTGG	1 cut(s)	391
XmiI	GTMKAC	2 cut(s)	1281, 2693
XmnI	GAANNNNTTC	2 cut(s)	1771, 2406
XspI	CTAG	6 cut(s)	549, 723, 870, 1356, 1844, 2091
ZrmI	AGTACT	1 cut(s)	368

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.