MD02G1299000.v1.1

Alpha/beta hydrolase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
35444901 .. 35448491
3591 bp
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UTR
Exon/CDS
Intron
MD02G1299000.v1.1.491

Sequence Viewer

Length: 1587 bp
ATGTGGAATAGAGGAATACATTTTCTGGTTATGGAAATACTCTCATACAGTTCTGCACCATGCTGTGATGCTGTAAGTTTAAGGGCAAGATTAGTCGAGAAATGCTCAAATTTACATCGCTCCGGGTTCCCAGATTTTAGGAGAAAAAGAGTTTATGGTGTTCGATTTGATTCCAGAAGTAGGTTGTTGAAGTGTCATGGTTTAGATCAGTCTTTCTTGAAGCAGCTAAATCGTCAGGGAGGTATTGGGTTACCCAACACCAGTGAAAGCTTCAAGCATGTTGGTCCGATTTTATCTAGTGGAAGCTCGGATGGCTATGTAATTGGCACGGCTGAGGATGCAAATGTTTCAGAAACGGGGGAATCTGTTACTAAGGTTTTGATTCCTGGTCTACCTGACGAACCCAAAGGCGAATTTGGTGCCCCAATAAGTAGTTGCTTTTGGGAATGGAAGCCCAAATTCAATGTGCATTATGAGAAAGCCGGATGCGATAACTTGGGATCCCCTCCAGTATTGTTTCTTCCTGGTTTTGGGGTTGGCTCTTTTCACTATGAGAAGCAACTGAAAGATTTGGGGCGTGATTTTAGAGTATGGGCAATTGATTTTCTTGGGCAGGGTAGGTCATTGCCATTTGAAGACCCTGCTCCTCGTATTAACGAAGAAGGTATGTCCGACAGGCAAGATACAGCGTGGGGTTTTGGAGAAAAAACCGAACCATGGGCAAGCGAGCTTGTCTACTCTATTGATTTATGGCAGGATCAAGTTCGTTACTTCATAGAAGAGGTAATTGGTGAACCTGTCTATATTGCGGGGAACTCGCTAGGAGGATTTGTTGCTTTGTATTTTGCCGCATGTAACCCTCATTTGGTGAAAGGCGTTACATTGCTGAATGCAACTCCTTTCTGGGGATTTCTACCTAACCCTATAAGATCTCCAAGACTAGCAAAAATATTCCCATCAGCAGGATCATTTCCGTTACCTGCCAGTGTGAGAAAGCTCACAGAAATACTTTGGCAAAAAATTAGCGATCCTCAGAGTATAGCGGAGGTACTCAAACAAGTTTATGCAGATCATTCAACAAACGTTGACAAAGTATTTTCCCGTATACTTGAGACATCAGAGCATCCAGCCGCTGCTGCATCATTGGCCTCAATTATGCTTGCTCCTCAAGGAAAATTATCCTTTAAGGAGGCTTTGTCCAGATGTCAAATGAACAACACACCGATTTGTCTTATGTATGGAAAAGAAGATCCATGGGTGAAACCTATTTGGGGCCTTCAGGTGAAGCAACAAGTGCCTGAAGCTCCATATTACGAGATCAGTCCAGCTGGCCACTGCCCTCACGATGAAGTTCCTGAGGTTGTGAATTACTTATTACGCGGGTGGATCAAAAACCTAGAGACTCGGGGTTTAGTTGCATTGCCTTTGATTGATGTCCCAGAAGGTACGCAGAACAACATTGCCAGGGACCTGGAATTTGTGAGAGATGGATCAAAAAAGTCAGTAAATGTTCGGTTCTTTGCATCCAAGTTCTCACTTTGGGACATGATCAGTTCTTATATCAGACCCCTCTTTCGGAAGTTATAG

Protein Analysis

529

Amino Acids

59.1

Weight (kDa)

7.15

Isoelectric Point (pI)

46.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 169 - 450 2.9e-17 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 171 - 455 1.3e-18 Alpha/beta hydrolase family
Hydrolase_4 PF12146 171 - 422 4.5e-06 Serine aminopeptidase, S33
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 988
AccB1I GGYRCC 1 cut(s) 419
AccI GTMKAC 3 cut(s) 391, 735, 1105
AccII CGCG 1 cut(s) 1380
AciI CCGC 5 cut(s) 809, 849, 1043, 1131, 1380
AclI AACGTT 1 cut(s) 1083
AclWI GGATC 8 cut(s) 495, 508, 765, 973, 1022, 1244, 1394, 1498
AcoI YGGCCR 1 cut(s) 1330
AcsI RAATTY 4 cut(s) 109, 413, 458, 1475
AcuI CTGAAG 2 cut(s) 1262, 1320
AfaI GTAC 2 cut(s) 1050, 1447
AfiI CCNNNNNNNGG 8 cut(s) 180, 530, 717, 865, 905, 962, 1271, 1575
AgsI TTSAA 6 cut(s) 190, 220, 274, 463, 635, 1077
AjnI CCWGG 4 cut(s) 385, 523, 1463, 1470
AjuI GAANNNNNNNTTGG 2 cut(s) 771, 803
AluBI AGCT 7 cut(s) 226, 270, 306, 730, 997, 1304, 1328
AluI AGCT 7 cut(s) 226, 270, 306, 730, 997, 1304, 1328
Alw26I GTCTC 2 cut(s) 1106, 1394
AlwI GGATC 8 cut(s) 495, 508, 765, 973, 1022, 1244, 1394, 1498
AlwNI CAGNNNCTG 1 cut(s) 1133
Ama87I CYCGRG 1 cut(s) 1404
AoxI GGCC 3 cut(s) 1146, 1273, 1330
ApeKI GCWGC 3 cut(s) 223, 1133, 1136
ApoI RAATTY 4 cut(s) 109, 413, 458, 1475
ArsI GACNNNNNNTTYG 3 cut(s) 1460, 1492, 1557
AspS9I GGNCC 3 cut(s) 284, 1273, 1468
AsuC2I CCSGG 1 cut(s) 124
AsuHPI GGTGA 4 cut(s) 803, 880, 1270, 1294
AvaI CYCGRG 1 cut(s) 1404
AvaII GGWCC 2 cut(s) 284, 1468
AxyI CCTNAGG 1 cut(s) 1356
BaeGI GKGCMC 1 cut(s) 424
BalI TGGCCA 1 cut(s) 1332
BamHI GGATCC 1 cut(s) 500
BanI GGYRCC 1 cut(s) 419
BarI GAAGNNNNNNTAC 2 cut(s) 504, 536
BbsI GAAGAC 1 cut(s) 642
BbvCI CCTCAGC 1 cut(s) 333
BbvI GCAGC 3 cut(s) 235, 1120, 1123
BccI CCATC 3 cut(s) 305, 964, 1481
BceAI ACGGC 1 cut(s) 345
BcgI CGANNNNNNTGC 4 cut(s) 212, 246, 401, 435
BciT130I CCWGG 4 cut(s) 387, 525, 1465, 1472
BclI TGATCA 1 cut(s) 1548
BcnI CCSGG 1 cut(s) 124
BcoDI GTCTC 2 cut(s) 1106, 1394
BfaI CTAG 4 cut(s) 297, 821, 941, 1397
BfuAI ACCTGC 1 cut(s) 988
BglII AGATCT 1 cut(s) 929
BisI GCNGC 5 cut(s) 224, 849, 1131, 1134, 1137
BlsI GCNGC 5 cut(s) 225, 850, 1132, 1135, 1138
Bme1390I CCNGG 5 cut(s) 124, 387, 525, 1465, 1472
Bme18I GGWCC 2 cut(s) 284, 1468
BmeT110I CYCGRG 1 cut(s) 1404
BmgT120I GGNCC 3 cut(s) 284, 1273, 1468
BmiI GGNNCC 5 cut(s) 128, 421, 502, 1274, 1469
BmrFI CCNGG 5 cut(s) 124, 387, 525, 1465, 1472
BmsI GCATC 6 cut(s) 58, 328, 476, 1132, 1148, 1532
BpiI GAAGAC 1 cut(s) 642
BplI GAGNNNNNCTC 2 cut(s) 89, 121
BpmI CTGGAG 1 cut(s) 492
Bpu10I CCTNAGC 1 cut(s) 333
BpuEI CTTGAG 2 cut(s) 1130, 1152
BpuMI CCSGG 1 cut(s) 124
BsaJI CCNNGG 3 cut(s) 716, 1253, 1464
BsaXI ACNNNNNCTCC 4 cut(s) 816, 846, 1181, 1211
Bsc4I CCNNNNNNNGG 8 cut(s) 180, 530, 717, 865, 905, 962, 1271, 1575
Bse1I ACTGG 3 cut(s) 261, 509, 984
Bse21I CCTNAGG 1 cut(s) 1356
Bse3DI GCAATG 4 cut(s) 623, 881, 1418, 1458
BseBI CCWGG 4 cut(s) 387, 525, 1465, 1472
BseDI CCNNGG 3 cut(s) 716, 1253, 1464
BseGI GGATG 5 cut(s) 316, 343, 491, 1123, 1523
BseLI CCNNNNNNNGG 8 cut(s) 180, 530, 717, 865, 905, 962, 1271, 1575
BseMI GCAATG 4 cut(s) 623, 881, 1418, 1458
BseMII CTCAG 3 cut(s) 324, 1046, 1347
BseNI ACTGG 3 cut(s) 261, 509, 984
BseRI GAGGAG 2 cut(s) 636, 1155
BseSI GKGCMC 1 cut(s) 424
BseXI GCAGC 3 cut(s) 235, 1120, 1123
BsgI GTGCAG 1 cut(s) 39
Bsh1236I CGCG 1 cut(s) 1380
BshFI GGCC 3 cut(s) 1148, 1275, 1332
BshNI GGYRCC 1 cut(s) 419
BsiHKCI CYCGRG 1 cut(s) 1404
BsiSI CCGG 2 cut(s) 123, 483
BslFI GGGAC 3 cut(s) 1421, 1481, 1556
BslI CCNNNNNNNGG 8 cut(s) 180, 530, 717, 865, 905, 962, 1271, 1575
BsmAI GTCTC 2 cut(s) 1106, 1394
BsmFI GGGAC 3 cut(s) 1421, 1481, 1556
BsmI GAATGC 1 cut(s) 895
BsnI GGCC 3 cut(s) 1148, 1275, 1332
BsoBI CYCGRG 1 cut(s) 1404
Bsp1286I GDGCHC 1 cut(s) 424
Bsp19I CCATGG 2 cut(s) 716, 1253
BspACI CCGC 5 cut(s) 809, 849, 1043, 1131, 1380
BspANI GGCC 3 cut(s) 1148, 1275, 1332
BspCNI CTCAG 3 cut(s) 325, 1045, 1348
BspFNI CGCG 1 cut(s) 1380
BspLI GGNNCC 5 cut(s) 128, 421, 502, 1274, 1469
BspMI ACCTGC 1 cut(s) 988
BspPI GGATC 8 cut(s) 495, 508, 765, 973, 1022, 1244, 1394, 1498
BspT107I GGYRCC 1 cut(s) 419
BsrDI GCAATG 4 cut(s) 623, 881, 1418, 1458
BsrI ACTGG 3 cut(s) 261, 509, 984
BssECI CCNNGG 3 cut(s) 716, 1253, 1464
BssNAI GTATAC 1 cut(s) 1106
BssT1I CCWWGG 2 cut(s) 716, 1253
Bst1107I GTATAC 1 cut(s) 1106
Bst2UI CCWGG 4 cut(s) 387, 525, 1465, 1472
Bst4CI ACNGT 1 cut(s) 50
Bst6I CTCTTC 1 cut(s) 774
BstAPI GCANNNNNTGC 1 cut(s) 1294
BstC8I GCNNGC 4 cut(s) 724, 728, 1161, 1330
BstDEI CTNAG 4 cut(s) 333, 372, 1032, 1356
BstDSI CCRYGG 2 cut(s) 716, 1253
BstEII GGTNACC 1 cut(s) 249
BstF5I GGATG 5 cut(s) 316, 343, 491, 1123, 1523
BstFNI CGCG 1 cut(s) 1380
BstMAI GTCTC 2 cut(s) 1106, 1394
BstMWI GCNNNNNNNGC 5 cut(s) 312, 338, 1136, 1145, 1294
BstNI CCWGG 4 cut(s) 387, 525, 1465, 1472
BstNSI RCATGY 2 cut(s) 281, 855
BstPI GGTNACC 1 cut(s) 249
BstSCI CCNGG 5 cut(s) 122, 385, 523, 1463, 1470
BstSLI GKGCMC 1 cut(s) 424
BstUI CGCG 1 cut(s) 1380
BstV1I GCAGC 3 cut(s) 235, 1120, 1123
BstV2I GAAGAC 1 cut(s) 642
BstX2I RGATCY 3 cut(s) 500, 929, 1249
BstXI CCANNNNNNTGG 1 cut(s) 1471
BstYI RGATCY 3 cut(s) 500, 929, 1249
BstZ17I GTATAC 1 cut(s) 1106
Bsu36I CCTNAGG 1 cut(s) 1356
BsuRI GGCC 3 cut(s) 1148, 1275, 1332
BtgI CCRYGG 2 cut(s) 716, 1253
BtgZI GCGATG 1 cut(s) 101
BtsCI GGATG 5 cut(s) 316, 343, 491, 1123, 1523
BtsI GCAGTG 1 cut(s) 1333
BtsIMutI CAGTG 3 cut(s) 268, 991, 1333
BveI ACCTGC 1 cut(s) 988
Cac8I GCNNGC 4 cut(s) 724, 728, 1161, 1330
CaiI CAGNNNCTG 1 cut(s) 1133
Cfr13I GGNCC 3 cut(s) 284, 1273, 1468
Csp6I GTAC 2 cut(s) 1049, 1446
CviAII CATG 7 cut(s) 60, 197, 278, 717, 852, 1254, 1546
CviQI GTAC 2 cut(s) 1049, 1446
DdeI CTNAG 4 cut(s) 333, 372, 1032, 1356
EaeI YGGCCR 1 cut(s) 1330
Eam1104I CTCTTC 1 cut(s) 774
EarI CTCTTC 1 cut(s) 774
Eco130I CCWWGG 2 cut(s) 716, 1253
Eco47I GGWCC 2 cut(s) 284, 1468
Eco57I CTGAAG 2 cut(s) 1262, 1320
Eco81I CCTNAGG 1 cut(s) 1356
Eco88I CYCGRG 1 cut(s) 1404
Eco91I GGTNACC 1 cut(s) 249
EcoO109I RGGNCCY 2 cut(s) 1273, 1468
EcoO65I GGTNACC 1 cut(s) 249
EcoRII CCWGG 4 cut(s) 385, 523, 1463, 1470
EcoT14I CCWWGG 2 cut(s) 716, 1253
ErhI CCWWGG 2 cut(s) 716, 1253
FaeI CATG 7 cut(s) 63, 200, 281, 720, 855, 1257, 1549
FaqI GGGAC 3 cut(s) 1421, 1481, 1556
FatI CATG 7 cut(s) 59, 196, 277, 716, 851, 1253, 1545
FauI CCCGC 2 cut(s) 802, 1373
FbaI TGATCA 1 cut(s) 1548
FblI GTMKAC 3 cut(s) 391, 735, 1105
Fnu4HI GCNGC 5 cut(s) 224, 849, 1131, 1134, 1137
FokI GGATG 5 cut(s) 323, 350, 498, 1110, 1510
Fsp4HI GCNGC 5 cut(s) 224, 849, 1131, 1134, 1137
FspBI CTAG 4 cut(s) 297, 821, 941, 1397
GluI GCNGC 5 cut(s) 224, 849, 1131, 1134, 1137
GsuI CTGGAG 1 cut(s) 492
HaeIII GGCC 3 cut(s) 1148, 1275, 1332
HapII CCGG 2 cut(s) 123, 483
Hin1II CATG 7 cut(s) 63, 200, 281, 720, 855, 1257, 1549
HincII GTYRAC 1 cut(s) 1087
HindII GTYRAC 1 cut(s) 1087
HindIII AAGCTT 1 cut(s) 268
HinfI GANTC 4 cut(s) 170, 362, 382, 1402
HpaII CCGG 2 cut(s) 123, 483
HphI GGTGA 4 cut(s) 803, 880, 1270, 1294
Hpy166II GTNNAC 5 cut(s) 392, 736, 794, 1087, 1106
Hpy188I TCNGA 8 cut(s) 288, 310, 352, 673, 1035, 1120, 1565, 1578
Hpy188III TCNNGA 6 cut(s) 97, 174, 217, 1200, 1343, 1355
Hpy8I GTNNAC 5 cut(s) 392, 736, 794, 1087, 1106
HpyAV CCTTC 3 cut(s) 656, 1286, 1436
HpyCH4III ACNGT 1 cut(s) 50
HpyCH4IV ACGT 1 cut(s) 1083
HpyCH4V TGCA 8 cut(s) 56, 341, 469, 893, 1067, 1139, 1418, 1523
HpyF10VI GCNNNNNNNGC 5 cut(s) 312, 338, 1136, 1145, 1294
HpyF3I CTNAG 4 cut(s) 333, 372, 1032, 1356
HpySE526I ACGT 1 cut(s) 1083
Hsp92II CATG 7 cut(s) 63, 200, 281, 720, 855, 1257, 1549
Ksp22I TGATCA 1 cut(s) 1548
LmnI GCTCC 4 cut(s) 125, 649, 1168, 1309
Lsp1109I GCAGC 3 cut(s) 235, 1120, 1123
LweI GCATC 6 cut(s) 58, 328, 476, 1132, 1148, 1532
MaeI CTAG 4 cut(s) 297, 821, 941, 1397
MaeII ACGT 1 cut(s) 1083
MaeIII GTNAC 6 cut(s) 249, 367, 767, 854, 877, 975
MboII GAAGA 5 cut(s) 512, 647, 671, 791, 1259
MfeI CAATTG 1 cut(s) 597
MflI RGATCY 3 cut(s) 500, 929, 1249
MhlI GDGCHC 1 cut(s) 424
MlsI TGGCCA 1 cut(s) 1332
MluNI TGGCCA 1 cut(s) 1332
MlyI GAGTC 1 cut(s) 1396
MmeI TCCRAC 1 cut(s) 696
Mox20I TGGCCA 1 cut(s) 1332
MscI TGGCCA 1 cut(s) 1332
MseI TTAA 3 cut(s) 80, 654, 1185
Msp20I TGGCCA 1 cut(s) 1332
MspA1I CMGCKG 2 cut(s) 1133, 1328
MspI CCGG 2 cut(s) 123, 483
MspR9I CCNGG 5 cut(s) 124, 387, 525, 1465, 1472
MunI CAATTG 1 cut(s) 597
Mva1269I GAATGC 1 cut(s) 895
MvaI CCWGG 4 cut(s) 387, 525, 1465, 1472
MvnI CGCG 1 cut(s) 1380
MwoI GCNNNNNNNGC 5 cut(s) 312, 338, 1136, 1145, 1294
NciI CCSGG 1 cut(s) 124
NcoI CCATGG 2 cut(s) 716, 1253
NlaIII CATG 7 cut(s) 63, 200, 281, 720, 855, 1257, 1549
NlaIV GGNNCC 5 cut(s) 128, 421, 502, 1274, 1469
NspI RCATGY 2 cut(s) 281, 855
PctI GAATGC 1 cut(s) 895
PfeI GAWTC 3 cut(s) 170, 362, 382
PkrI GCNGC 5 cut(s) 225, 850, 1132, 1135, 1138
PleI GAGTC 1 cut(s) 1396
PpsI GAGTC 1 cut(s) 1396
PpuMI RGGWCCY 1 cut(s) 1468
Psp1406I AACGTT 1 cut(s) 1083
Psp5II RGGWCCY 1 cut(s) 1468
Psp6I CCWGG 4 cut(s) 385, 523, 1463, 1470
PspEI GGTNACC 1 cut(s) 249
PspGI CCWGG 4 cut(s) 385, 523, 1463, 1470
PspN4I GGNNCC 5 cut(s) 128, 421, 502, 1274, 1469
PspPI GGNCC 3 cut(s) 284, 1273, 1468
PspPPI RGGWCCY 1 cut(s) 1468
PstNI CAGNNNCTG 1 cut(s) 1133
PsuI RGATCY 3 cut(s) 500, 929, 1249
PvuII CAGCTG 1 cut(s) 1328
RsaI GTAC 2 cut(s) 1050, 1447
RsaNI GTAC 2 cut(s) 1049, 1446
SaqAI TTAA 3 cut(s) 80, 654, 1185
SatI GCNGC 5 cut(s) 224, 849, 1131, 1134, 1137
Sau96I GGNCC 3 cut(s) 284, 1273, 1468
SchI GAGTC 1 cut(s) 1396
ScrFI CCNGG 5 cut(s) 124, 387, 525, 1465, 1472
SduI GDGCHC 1 cut(s) 424
SfaNI GCATC 6 cut(s) 58, 328, 476, 1132, 1148, 1532
SinI GGWCC 2 cut(s) 284, 1468
SmlI CTYRAG 2 cut(s) 1109, 1167
SmoI CTYRAG 2 cut(s) 1109, 1167
SsiI CCGC 5 cut(s) 809, 849, 1043, 1131, 1380
SspI AATATT 1 cut(s) 951
SspMI CTAG 4 cut(s) 297, 821, 941, 1397
StyD4I CCNGG 5 cut(s) 122, 385, 523, 1463, 1470
StyI CCWWGG 2 cut(s) 716, 1253
TaaI ACNGT 1 cut(s) 50
TaiI ACGT 1 cut(s) 1086
TaqI TCGA 2 cut(s) 96, 163
TauI GCSGC 2 cut(s) 851, 1133
TfiI GAWTC 3 cut(s) 170, 362, 382
Tru1I TTAA 3 cut(s) 80, 654, 1185
Tru9I TTAA 3 cut(s) 80, 654, 1185
TscAI CASTG 3 cut(s) 268, 991, 1340
TseI GCWGC 3 cut(s) 223, 1133, 1136
TspDTI ATGAA 3 cut(s) 763, 1226, 1362
TspGWI ACGGA 1 cut(s) 963
TspRI CASTG 3 cut(s) 268, 991, 1340
VpaK11BI GGWCC 2 cut(s) 284, 1468
XapI RAATTY 4 cut(s) 109, 413, 458, 1475
XceI RCATGY 2 cut(s) 281, 855
XmiI GTMKAC 3 cut(s) 391, 735, 1105
XspI CTAG 4 cut(s) 297, 821, 941, 1397
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.