Alpha/beta hydrolase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13800 AT5G13800 AT5G13800 AT5G13800 |
| fragaria_vesca | FvH4_7g01940 FvH4_7g01940 |
| malus_domestica | MD02G1299000.v1.1 MD07G1025100.v1.1 |
| prunus_persica | Prupe.2G025100_v2.0.a1 Prupe.2G025100_v2.0.a1 |
| pyrus_communis | pycom02g25150 pycom02g25160 pycom07g01940 |
| rosa_chinensis | RchiOBHm_Chr1g0318661 RchiOBHm_Chr1g0318891 |
| rosa_laevigata | RLG00000030519 |
| rosa_multiflora | Rmu_co8335935.1_g000001 Rmu_sc0001304.1_g000038 Rmu_sc0002545.1_g000013 |
| rosa_roxburghii | Rroxscaffold_4G00328990 |
| rosa_rugosa | Rorug01G0022600 Rorug01G0022700 |
| rosa_samantha | Rh1AG035700 Rh1AG037000 Rh1BG031500 Rh1CG034600 Rh1DG035700 |
| rosa_wichuraiana | Rw1G002790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 988 |
| AccB1I | GGYRCC | 1 cut(s) | 419 |
| AccI | GTMKAC | 3 cut(s) | 391, 735, 1105 |
| AccII | CGCG | 1 cut(s) | 1380 |
| AciI | CCGC | 5 cut(s) | 809, 849, 1043, 1131, 1380 |
| AclI | AACGTT | 1 cut(s) | 1083 |
| AclWI | GGATC | 8 cut(s) | 495, 508, 765, 973, 1022, 1244, 1394, 1498 |
| AcoI | YGGCCR | 1 cut(s) | 1330 |
| AcsI | RAATTY | 4 cut(s) | 109, 413, 458, 1475 |
| AcuI | CTGAAG | 2 cut(s) | 1262, 1320 |
| AfaI | GTAC | 2 cut(s) | 1050, 1447 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 180, 530, 717, 865, 905, 962, 1271, 1575 |
| AgsI | TTSAA | 6 cut(s) | 190, 220, 274, 463, 635, 1077 |
| AjnI | CCWGG | 4 cut(s) | 385, 523, 1463, 1470 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 771, 803 |
| AluBI | AGCT | 7 cut(s) | 226, 270, 306, 730, 997, 1304, 1328 |
| AluI | AGCT | 7 cut(s) | 226, 270, 306, 730, 997, 1304, 1328 |
| Alw26I | GTCTC | 2 cut(s) | 1106, 1394 |
| AlwI | GGATC | 8 cut(s) | 495, 508, 765, 973, 1022, 1244, 1394, 1498 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1133 |
| Ama87I | CYCGRG | 1 cut(s) | 1404 |
| AoxI | GGCC | 3 cut(s) | 1146, 1273, 1330 |
| ApeKI | GCWGC | 3 cut(s) | 223, 1133, 1136 |
| ApoI | RAATTY | 4 cut(s) | 109, 413, 458, 1475 |
| ArsI | GACNNNNNNTTYG | 3 cut(s) | 1460, 1492, 1557 |
| AspS9I | GGNCC | 3 cut(s) | 284, 1273, 1468 |
| AsuC2I | CCSGG | 1 cut(s) | 124 |
| AsuHPI | GGTGA | 4 cut(s) | 803, 880, 1270, 1294 |
| AvaI | CYCGRG | 1 cut(s) | 1404 |
| AvaII | GGWCC | 2 cut(s) | 284, 1468 |
| AxyI | CCTNAGG | 1 cut(s) | 1356 |
| BaeGI | GKGCMC | 1 cut(s) | 424 |
| BalI | TGGCCA | 1 cut(s) | 1332 |
| BamHI | GGATCC | 1 cut(s) | 500 |
| BanI | GGYRCC | 1 cut(s) | 419 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 504, 536 |
| BbsI | GAAGAC | 1 cut(s) | 642 |
| BbvCI | CCTCAGC | 1 cut(s) | 333 |
| BbvI | GCAGC | 3 cut(s) | 235, 1120, 1123 |
| BccI | CCATC | 3 cut(s) | 305, 964, 1481 |
| BceAI | ACGGC | 1 cut(s) | 345 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 212, 246, 401, 435 |
| BciT130I | CCWGG | 4 cut(s) | 387, 525, 1465, 1472 |
| BclI | TGATCA | 1 cut(s) | 1548 |
| BcnI | CCSGG | 1 cut(s) | 124 |
| BcoDI | GTCTC | 2 cut(s) | 1106, 1394 |
| BfaI | CTAG | 4 cut(s) | 297, 821, 941, 1397 |
| BfuAI | ACCTGC | 1 cut(s) | 988 |
| BglII | AGATCT | 1 cut(s) | 929 |
| BisI | GCNGC | 5 cut(s) | 224, 849, 1131, 1134, 1137 |
| BlsI | GCNGC | 5 cut(s) | 225, 850, 1132, 1135, 1138 |
| Bme1390I | CCNGG | 5 cut(s) | 124, 387, 525, 1465, 1472 |
| Bme18I | GGWCC | 2 cut(s) | 284, 1468 |
| BmeT110I | CYCGRG | 1 cut(s) | 1404 |
| BmgT120I | GGNCC | 3 cut(s) | 284, 1273, 1468 |
| BmiI | GGNNCC | 5 cut(s) | 128, 421, 502, 1274, 1469 |
| BmrFI | CCNGG | 5 cut(s) | 124, 387, 525, 1465, 1472 |
| BmsI | GCATC | 6 cut(s) | 58, 328, 476, 1132, 1148, 1532 |
| BpiI | GAAGAC | 1 cut(s) | 642 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 89, 121 |
| BpmI | CTGGAG | 1 cut(s) | 492 |
| Bpu10I | CCTNAGC | 1 cut(s) | 333 |
| BpuEI | CTTGAG | 2 cut(s) | 1130, 1152 |
| BpuMI | CCSGG | 1 cut(s) | 124 |
| BsaJI | CCNNGG | 3 cut(s) | 716, 1253, 1464 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 816, 846, 1181, 1211 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 180, 530, 717, 865, 905, 962, 1271, 1575 |
| Bse1I | ACTGG | 3 cut(s) | 261, 509, 984 |
| Bse21I | CCTNAGG | 1 cut(s) | 1356 |
| Bse3DI | GCAATG | 4 cut(s) | 623, 881, 1418, 1458 |
| BseBI | CCWGG | 4 cut(s) | 387, 525, 1465, 1472 |
| BseDI | CCNNGG | 3 cut(s) | 716, 1253, 1464 |
| BseGI | GGATG | 5 cut(s) | 316, 343, 491, 1123, 1523 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 180, 530, 717, 865, 905, 962, 1271, 1575 |
| BseMI | GCAATG | 4 cut(s) | 623, 881, 1418, 1458 |
| BseMII | CTCAG | 3 cut(s) | 324, 1046, 1347 |
| BseNI | ACTGG | 3 cut(s) | 261, 509, 984 |
| BseRI | GAGGAG | 2 cut(s) | 636, 1155 |
| BseSI | GKGCMC | 1 cut(s) | 424 |
| BseXI | GCAGC | 3 cut(s) | 235, 1120, 1123 |
| BsgI | GTGCAG | 1 cut(s) | 39 |
| Bsh1236I | CGCG | 1 cut(s) | 1380 |
| BshFI | GGCC | 3 cut(s) | 1148, 1275, 1332 |
| BshNI | GGYRCC | 1 cut(s) | 419 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1404 |
| BsiSI | CCGG | 2 cut(s) | 123, 483 |
| BslFI | GGGAC | 3 cut(s) | 1421, 1481, 1556 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 180, 530, 717, 865, 905, 962, 1271, 1575 |
| BsmAI | GTCTC | 2 cut(s) | 1106, 1394 |
| BsmFI | GGGAC | 3 cut(s) | 1421, 1481, 1556 |
| BsmI | GAATGC | 1 cut(s) | 895 |
| BsnI | GGCC | 3 cut(s) | 1148, 1275, 1332 |
| BsoBI | CYCGRG | 1 cut(s) | 1404 |
| Bsp1286I | GDGCHC | 1 cut(s) | 424 |
| Bsp19I | CCATGG | 2 cut(s) | 716, 1253 |
| BspACI | CCGC | 5 cut(s) | 809, 849, 1043, 1131, 1380 |
| BspANI | GGCC | 3 cut(s) | 1148, 1275, 1332 |
| BspCNI | CTCAG | 3 cut(s) | 325, 1045, 1348 |
| BspFNI | CGCG | 1 cut(s) | 1380 |
| BspLI | GGNNCC | 5 cut(s) | 128, 421, 502, 1274, 1469 |
| BspMI | ACCTGC | 1 cut(s) | 988 |
| BspPI | GGATC | 8 cut(s) | 495, 508, 765, 973, 1022, 1244, 1394, 1498 |
| BspT107I | GGYRCC | 1 cut(s) | 419 |
| BsrDI | GCAATG | 4 cut(s) | 623, 881, 1418, 1458 |
| BsrI | ACTGG | 3 cut(s) | 261, 509, 984 |
| BssECI | CCNNGG | 3 cut(s) | 716, 1253, 1464 |
| BssNAI | GTATAC | 1 cut(s) | 1106 |
| BssT1I | CCWWGG | 2 cut(s) | 716, 1253 |
| Bst1107I | GTATAC | 1 cut(s) | 1106 |
| Bst2UI | CCWGG | 4 cut(s) | 387, 525, 1465, 1472 |
| Bst4CI | ACNGT | 1 cut(s) | 50 |
| Bst6I | CTCTTC | 1 cut(s) | 774 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1294 |
| BstC8I | GCNNGC | 4 cut(s) | 724, 728, 1161, 1330 |
| BstDEI | CTNAG | 4 cut(s) | 333, 372, 1032, 1356 |
| BstDSI | CCRYGG | 2 cut(s) | 716, 1253 |
| BstEII | GGTNACC | 1 cut(s) | 249 |
| BstF5I | GGATG | 5 cut(s) | 316, 343, 491, 1123, 1523 |
| BstFNI | CGCG | 1 cut(s) | 1380 |
| BstMAI | GTCTC | 2 cut(s) | 1106, 1394 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 312, 338, 1136, 1145, 1294 |
| BstNI | CCWGG | 4 cut(s) | 387, 525, 1465, 1472 |
| BstNSI | RCATGY | 2 cut(s) | 281, 855 |
| BstPI | GGTNACC | 1 cut(s) | 249 |
| BstSCI | CCNGG | 5 cut(s) | 122, 385, 523, 1463, 1470 |
| BstSLI | GKGCMC | 1 cut(s) | 424 |
| BstUI | CGCG | 1 cut(s) | 1380 |
| BstV1I | GCAGC | 3 cut(s) | 235, 1120, 1123 |
| BstV2I | GAAGAC | 1 cut(s) | 642 |
| BstX2I | RGATCY | 3 cut(s) | 500, 929, 1249 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1471 |
| BstYI | RGATCY | 3 cut(s) | 500, 929, 1249 |
| BstZ17I | GTATAC | 1 cut(s) | 1106 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1356 |
| BsuRI | GGCC | 3 cut(s) | 1148, 1275, 1332 |
| BtgI | CCRYGG | 2 cut(s) | 716, 1253 |
| BtgZI | GCGATG | 1 cut(s) | 101 |
| BtsCI | GGATG | 5 cut(s) | 316, 343, 491, 1123, 1523 |
| BtsI | GCAGTG | 1 cut(s) | 1333 |
| BtsIMutI | CAGTG | 3 cut(s) | 268, 991, 1333 |
| BveI | ACCTGC | 1 cut(s) | 988 |
| Cac8I | GCNNGC | 4 cut(s) | 724, 728, 1161, 1330 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1133 |
| Cfr13I | GGNCC | 3 cut(s) | 284, 1273, 1468 |
| Csp6I | GTAC | 2 cut(s) | 1049, 1446 |
| CviAII | CATG | 7 cut(s) | 60, 197, 278, 717, 852, 1254, 1546 |
| CviQI | GTAC | 2 cut(s) | 1049, 1446 |
| DdeI | CTNAG | 4 cut(s) | 333, 372, 1032, 1356 |
| EaeI | YGGCCR | 1 cut(s) | 1330 |
| Eam1104I | CTCTTC | 1 cut(s) | 774 |
| EarI | CTCTTC | 1 cut(s) | 774 |
| Eco130I | CCWWGG | 2 cut(s) | 716, 1253 |
| Eco47I | GGWCC | 2 cut(s) | 284, 1468 |
| Eco57I | CTGAAG | 2 cut(s) | 1262, 1320 |
| Eco81I | CCTNAGG | 1 cut(s) | 1356 |
| Eco88I | CYCGRG | 1 cut(s) | 1404 |
| Eco91I | GGTNACC | 1 cut(s) | 249 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1273, 1468 |
| EcoO65I | GGTNACC | 1 cut(s) | 249 |
| EcoRII | CCWGG | 4 cut(s) | 385, 523, 1463, 1470 |
| EcoT14I | CCWWGG | 2 cut(s) | 716, 1253 |
| ErhI | CCWWGG | 2 cut(s) | 716, 1253 |
| FaeI | CATG | 7 cut(s) | 63, 200, 281, 720, 855, 1257, 1549 |
| FaqI | GGGAC | 3 cut(s) | 1421, 1481, 1556 |
| FatI | CATG | 7 cut(s) | 59, 196, 277, 716, 851, 1253, 1545 |
| FauI | CCCGC | 2 cut(s) | 802, 1373 |
| FbaI | TGATCA | 1 cut(s) | 1548 |
| FblI | GTMKAC | 3 cut(s) | 391, 735, 1105 |
| Fnu4HI | GCNGC | 5 cut(s) | 224, 849, 1131, 1134, 1137 |
| FokI | GGATG | 5 cut(s) | 323, 350, 498, 1110, 1510 |
| Fsp4HI | GCNGC | 5 cut(s) | 224, 849, 1131, 1134, 1137 |
| FspBI | CTAG | 4 cut(s) | 297, 821, 941, 1397 |
| GluI | GCNGC | 5 cut(s) | 224, 849, 1131, 1134, 1137 |
| GsuI | CTGGAG | 1 cut(s) | 492 |
| HaeIII | GGCC | 3 cut(s) | 1148, 1275, 1332 |
| HapII | CCGG | 2 cut(s) | 123, 483 |
| Hin1II | CATG | 7 cut(s) | 63, 200, 281, 720, 855, 1257, 1549 |
| HincII | GTYRAC | 1 cut(s) | 1087 |
| HindII | GTYRAC | 1 cut(s) | 1087 |
| HindIII | AAGCTT | 1 cut(s) | 268 |
| HinfI | GANTC | 4 cut(s) | 170, 362, 382, 1402 |
| HpaII | CCGG | 2 cut(s) | 123, 483 |
| HphI | GGTGA | 4 cut(s) | 803, 880, 1270, 1294 |
| Hpy166II | GTNNAC | 5 cut(s) | 392, 736, 794, 1087, 1106 |
| Hpy188I | TCNGA | 8 cut(s) | 288, 310, 352, 673, 1035, 1120, 1565, 1578 |
| Hpy188III | TCNNGA | 6 cut(s) | 97, 174, 217, 1200, 1343, 1355 |
| Hpy8I | GTNNAC | 5 cut(s) | 392, 736, 794, 1087, 1106 |
| HpyAV | CCTTC | 3 cut(s) | 656, 1286, 1436 |
| HpyCH4III | ACNGT | 1 cut(s) | 50 |
| HpyCH4IV | ACGT | 1 cut(s) | 1083 |
| HpyCH4V | TGCA | 8 cut(s) | 56, 341, 469, 893, 1067, 1139, 1418, 1523 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 312, 338, 1136, 1145, 1294 |
| HpyF3I | CTNAG | 4 cut(s) | 333, 372, 1032, 1356 |
| HpySE526I | ACGT | 1 cut(s) | 1083 |
| Hsp92II | CATG | 7 cut(s) | 63, 200, 281, 720, 855, 1257, 1549 |
| Ksp22I | TGATCA | 1 cut(s) | 1548 |
| LmnI | GCTCC | 4 cut(s) | 125, 649, 1168, 1309 |
| Lsp1109I | GCAGC | 3 cut(s) | 235, 1120, 1123 |
| LweI | GCATC | 6 cut(s) | 58, 328, 476, 1132, 1148, 1532 |
| MaeI | CTAG | 4 cut(s) | 297, 821, 941, 1397 |
| MaeII | ACGT | 1 cut(s) | 1083 |
| MaeIII | GTNAC | 6 cut(s) | 249, 367, 767, 854, 877, 975 |
| MboII | GAAGA | 5 cut(s) | 512, 647, 671, 791, 1259 |
| MfeI | CAATTG | 1 cut(s) | 597 |
| MflI | RGATCY | 3 cut(s) | 500, 929, 1249 |
| MhlI | GDGCHC | 1 cut(s) | 424 |
| MlsI | TGGCCA | 1 cut(s) | 1332 |
| MluNI | TGGCCA | 1 cut(s) | 1332 |
| MlyI | GAGTC | 1 cut(s) | 1396 |
| MmeI | TCCRAC | 1 cut(s) | 696 |
| Mox20I | TGGCCA | 1 cut(s) | 1332 |
| MscI | TGGCCA | 1 cut(s) | 1332 |
| MseI | TTAA | 3 cut(s) | 80, 654, 1185 |
| Msp20I | TGGCCA | 1 cut(s) | 1332 |
| MspA1I | CMGCKG | 2 cut(s) | 1133, 1328 |
| MspI | CCGG | 2 cut(s) | 123, 483 |
| MspR9I | CCNGG | 5 cut(s) | 124, 387, 525, 1465, 1472 |
| MunI | CAATTG | 1 cut(s) | 597 |
| Mva1269I | GAATGC | 1 cut(s) | 895 |
| MvaI | CCWGG | 4 cut(s) | 387, 525, 1465, 1472 |
| MvnI | CGCG | 1 cut(s) | 1380 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 312, 338, 1136, 1145, 1294 |
| NciI | CCSGG | 1 cut(s) | 124 |
| NcoI | CCATGG | 2 cut(s) | 716, 1253 |
| NlaIII | CATG | 7 cut(s) | 63, 200, 281, 720, 855, 1257, 1549 |
| NlaIV | GGNNCC | 5 cut(s) | 128, 421, 502, 1274, 1469 |
| NspI | RCATGY | 2 cut(s) | 281, 855 |
| PctI | GAATGC | 1 cut(s) | 895 |
| PfeI | GAWTC | 3 cut(s) | 170, 362, 382 |
| PkrI | GCNGC | 5 cut(s) | 225, 850, 1132, 1135, 1138 |
| PleI | GAGTC | 1 cut(s) | 1396 |
| PpsI | GAGTC | 1 cut(s) | 1396 |
| PpuMI | RGGWCCY | 1 cut(s) | 1468 |
| Psp1406I | AACGTT | 1 cut(s) | 1083 |
| Psp5II | RGGWCCY | 1 cut(s) | 1468 |
| Psp6I | CCWGG | 4 cut(s) | 385, 523, 1463, 1470 |
| PspEI | GGTNACC | 1 cut(s) | 249 |
| PspGI | CCWGG | 4 cut(s) | 385, 523, 1463, 1470 |
| PspN4I | GGNNCC | 5 cut(s) | 128, 421, 502, 1274, 1469 |
| PspPI | GGNCC | 3 cut(s) | 284, 1273, 1468 |
| PspPPI | RGGWCCY | 1 cut(s) | 1468 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1133 |
| PsuI | RGATCY | 3 cut(s) | 500, 929, 1249 |
| PvuII | CAGCTG | 1 cut(s) | 1328 |
| RsaI | GTAC | 2 cut(s) | 1050, 1447 |
| RsaNI | GTAC | 2 cut(s) | 1049, 1446 |
| SaqAI | TTAA | 3 cut(s) | 80, 654, 1185 |
| SatI | GCNGC | 5 cut(s) | 224, 849, 1131, 1134, 1137 |
| Sau96I | GGNCC | 3 cut(s) | 284, 1273, 1468 |
| SchI | GAGTC | 1 cut(s) | 1396 |
| ScrFI | CCNGG | 5 cut(s) | 124, 387, 525, 1465, 1472 |
| SduI | GDGCHC | 1 cut(s) | 424 |
| SfaNI | GCATC | 6 cut(s) | 58, 328, 476, 1132, 1148, 1532 |
| SinI | GGWCC | 2 cut(s) | 284, 1468 |
| SmlI | CTYRAG | 2 cut(s) | 1109, 1167 |
| SmoI | CTYRAG | 2 cut(s) | 1109, 1167 |
| SsiI | CCGC | 5 cut(s) | 809, 849, 1043, 1131, 1380 |
| SspI | AATATT | 1 cut(s) | 951 |
| SspMI | CTAG | 4 cut(s) | 297, 821, 941, 1397 |
| StyD4I | CCNGG | 5 cut(s) | 122, 385, 523, 1463, 1470 |
| StyI | CCWWGG | 2 cut(s) | 716, 1253 |
| TaaI | ACNGT | 1 cut(s) | 50 |
| TaiI | ACGT | 1 cut(s) | 1086 |
| TaqI | TCGA | 2 cut(s) | 96, 163 |
| TauI | GCSGC | 2 cut(s) | 851, 1133 |
| TfiI | GAWTC | 3 cut(s) | 170, 362, 382 |
| Tru1I | TTAA | 3 cut(s) | 80, 654, 1185 |
| Tru9I | TTAA | 3 cut(s) | 80, 654, 1185 |
| TscAI | CASTG | 3 cut(s) | 268, 991, 1340 |
| TseI | GCWGC | 3 cut(s) | 223, 1133, 1136 |
| TspDTI | ATGAA | 3 cut(s) | 763, 1226, 1362 |
| TspGWI | ACGGA | 1 cut(s) | 963 |
| TspRI | CASTG | 3 cut(s) | 268, 991, 1340 |
| VpaK11BI | GGWCC | 2 cut(s) | 284, 1468 |
| XapI | RAATTY | 4 cut(s) | 109, 413, 458, 1475 |
| XceI | RCATGY | 2 cut(s) | 281, 855 |
| XmiI | GTMKAC | 3 cut(s) | 391, 735, 1105 |
| XspI | CTAG | 4 cut(s) | 297, 821, 941, 1397 |