Alpha/beta hydrolase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13800 AT5G13800 AT5G13800 AT5G13800 |
| fragaria_vesca | FvH4_7g01940 FvH4_7g01940 |
| malus_domestica | MD02G1299000.v1.1 MD07G1025100.v1.1 |
| prunus_persica | Prupe.2G025100_v2.0.a1 Prupe.2G025100_v2.0.a1 |
| pyrus_communis | pycom02g25150 pycom02g25160 pycom07g01940 |
| rosa_chinensis | RchiOBHm_Chr1g0318661 RchiOBHm_Chr1g0318891 |
| rosa_laevigata | RLG00000030519 |
| rosa_multiflora | Rmu_co8335935.1_g000001 Rmu_sc0001304.1_g000038 Rmu_sc0002545.1_g000013 |
| rosa_roxburghii | Rroxscaffold_4G00328990 |
| rosa_rugosa | Rorug01G0022600 Rorug01G0022700 |
| rosa_samantha | Rh1AG035700 Rh1AG037000 Rh1BG031500 Rh1CG034600 Rh1DG035700 |
| rosa_wichuraiana | Rw1G002790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1357 |
| Acc36I | ACCTGC | 2 cut(s) | 1063, 1357 |
| AccB1I | GGYRCC | 1 cut(s) | 1369 |
| AciI | CCGC | 1 cut(s) | 1177 |
| AclWI | GGATC | 8 cut(s) | 147, 568, 840, 1097, 1469, 1573, 1593, 1606 |
| AcoI | YGGCCR | 1 cut(s) | 685 |
| AcsI | RAATTY | 3 cut(s) | 533, 1079, 1550 |
| AcuI | CTGAAG | 2 cut(s) | 6, 1395 |
| AfaI | GTAC | 3 cut(s) | 19, 468, 727 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 605, 688, 792, 980, 1037, 1346 |
| AgsI | TTSAA | 5 cut(s) | 205, 256, 538, 1152, 1227 |
| AjnI | CCWGG | 3 cut(s) | 460, 598, 687 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 846, 878 |
| AluBI | AGCT | 7 cut(s) | 381, 805, 1072, 1379, 1403, 1629, 1663 |
| AluI | AGCT | 7 cut(s) | 381, 805, 1072, 1379, 1403, 1629, 1663 |
| Alw21I | GWGCWC | 2 cut(s) | 499, 1665 |
| Alw26I | GTCTC | 2 cut(s) | 1181, 1482 |
| AlwI | GGATC | 8 cut(s) | 147, 568, 840, 1097, 1469, 1573, 1593, 1606 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 431, 563, 1126 |
| AoxI | GGCC | 1 cut(s) | 685 |
| ApeKI | GCWGC | 4 cut(s) | 923, 1205, 1208, 1211 |
| ApoI | RAATTY | 3 cut(s) | 533, 1079, 1550 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 283 |
| AspA2I | CCTAGG | 1 cut(s) | 1106 |
| AspLEI | GCGC | 1 cut(s) | 1590 |
| AspS9I | GGNCC | 1 cut(s) | 359 |
| AsuC2I | CCSGG | 2 cut(s) | 66, 311 |
| AsuHPI | GGTGA | 5 cut(s) | 299, 497, 878, 1369, 1591 |
| AvaII | GGWCC | 1 cut(s) | 359 |
| AvrII | CCTAGG | 1 cut(s) | 1106 |
| AxyI | CCTNAGG | 2 cut(s) | 1242, 1431 |
| BalI | TGGCCA | 1 cut(s) | 687 |
| BamHI | GGATCC | 1 cut(s) | 1598 |
| BanI | GGYRCC | 1 cut(s) | 1369 |
| BanII | GRGCYC | 1 cut(s) | 1665 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 223, 255 |
| BbsI | GAAGAC | 2 cut(s) | 717, 1329 |
| Bbv12I | GWGCWC | 2 cut(s) | 499, 1665 |
| BbvI | GCAGC | 4 cut(s) | 910, 1192, 1195, 1198 |
| BccI | CCATC | 3 cut(s) | 41, 380, 1556 |
| BciT130I | CCWGG | 3 cut(s) | 462, 600, 689 |
| BclI | TGATCA | 1 cut(s) | 1144 |
| BcnI | CCSGG | 2 cut(s) | 66, 311 |
| BcoDI | GTCTC | 2 cut(s) | 1181, 1482 |
| BfaI | CTAG | 4 cut(s) | 729, 1016, 1107, 1472 |
| BfuAI | ACCTGC | 2 cut(s) | 1063, 1357 |
| BglII | AGATCT | 1 cut(s) | 1004 |
| BisI | GCNGC | 4 cut(s) | 924, 1206, 1209, 1212 |
| BlnI | CCTAGG | 1 cut(s) | 1106 |
| BlsI | GCNGC | 4 cut(s) | 925, 1207, 1210, 1213 |
| Bme1390I | CCNGG | 5 cut(s) | 66, 311, 462, 600, 689 |
| Bme18I | GGWCC | 1 cut(s) | 359 |
| BmgT120I | GGNCC | 1 cut(s) | 359 |
| BmiI | GGNNCC | 3 cut(s) | 577, 1371, 1600 |
| BmrFI | CCNGG | 5 cut(s) | 66, 311, 462, 600, 689 |
| BmrI | ACTGGG | 2 cut(s) | 441, 905 |
| BmsI | GCATC | 4 cut(s) | 190, 403, 1223, 1498 |
| BmuI | ACTGGG | 2 cut(s) | 441, 905 |
| BpiI | GAAGAC | 2 cut(s) | 717, 1329 |
| BpuEI | CTTGAG | 2 cut(s) | 1464, 1649 |
| BpuMI | CCSGG | 2 cut(s) | 66, 311 |
| BsaAI | YACGTR | 1 cut(s) | 394 |
| BsaJI | CCNNGG | 8 cut(s) | 65, 310, 682, 688, 791, 1031, 1106, 1328 |
| BsaWI | WCCGGW | 1 cut(s) | 469 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 560, 590, 891, 921 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 605, 688, 792, 980, 1037, 1346 |
| Bse1I | ACTGG | 6 cut(s) | 436, 584, 900, 1131, 1275, 1298 |
| Bse21I | CCTNAGG | 2 cut(s) | 1242, 1431 |
| Bse3DI | GCAATG | 2 cut(s) | 956, 1533 |
| BseBI | CCWGG | 3 cut(s) | 462, 600, 689 |
| BseDI | CCNNGG | 8 cut(s) | 65, 310, 682, 688, 791, 1031, 1106, 1328 |
| BseGI | GGATG | 4 cut(s) | 33, 418, 478, 1198 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 605, 688, 792, 980, 1037, 1346 |
| BseMI | GCAATG | 2 cut(s) | 956, 1533 |
| BseMII | CTCAG | 1 cut(s) | 1422 |
| BseNI | ACTGG | 6 cut(s) | 436, 584, 900, 1131, 1275, 1298 |
| BseXI | GCAGC | 4 cut(s) | 910, 1192, 1195, 1198 |
| BsgI | GTGCAG | 2 cut(s) | 1139, 1544 |
| BshFI | GGCC | 1 cut(s) | 687 |
| BshNI | GGYRCC | 1 cut(s) | 1369 |
| BsiHKAI | GWGCWC | 2 cut(s) | 499, 1665 |
| BsiSI | CCGG | 4 cut(s) | 65, 310, 470, 1202 |
| BslFI | GGGAC | 5 cut(s) | 663, 1260, 1475, 1556, 1631 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 605, 688, 792, 980, 1037, 1346 |
| BsmAI | GTCTC | 2 cut(s) | 1181, 1482 |
| BsmFI | GGGAC | 5 cut(s) | 663, 1260, 1475, 1556, 1631 |
| BsnI | GGCC | 1 cut(s) | 687 |
| Bsp1286I | GDGCHC | 2 cut(s) | 499, 1665 |
| Bsp19I | CCATGG | 3 cut(s) | 791, 1031, 1328 |
| BspACI | CCGC | 1 cut(s) | 1177 |
| BspANI | GGCC | 1 cut(s) | 687 |
| BspCNI | CTCAG | 1 cut(s) | 1423 |
| BspHI | TCATGA | 1 cut(s) | 1417 |
| BspLI | GGNNCC | 3 cut(s) | 577, 1371, 1600 |
| BspMI | ACCTGC | 2 cut(s) | 1063, 1357 |
| BspPI | GGATC | 8 cut(s) | 147, 568, 840, 1097, 1469, 1573, 1593, 1606 |
| BspT107I | GGYRCC | 1 cut(s) | 1369 |
| BsrDI | GCAATG | 2 cut(s) | 956, 1533 |
| BsrI | ACTGG | 6 cut(s) | 436, 584, 900, 1131, 1275, 1298 |
| BssECI | CCNNGG | 8 cut(s) | 65, 310, 682, 688, 791, 1031, 1106, 1328 |
| BssT1I | CCWWGG | 5 cut(s) | 682, 791, 1031, 1106, 1328 |
| Bst2UI | CCWGG | 3 cut(s) | 462, 600, 689 |
| Bst4CI | ACNGT | 2 cut(s) | 120, 230 |
| Bst6I | CTCTTC | 2 cut(s) | 402, 849 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1220 |
| BstBAI | YACGTR | 1 cut(s) | 394 |
| BstDEI | CTNAG | 3 cut(s) | 571, 1242, 1431 |
| BstDSI | CCRYGG | 3 cut(s) | 791, 1031, 1328 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 686 |
| BstF5I | GGATG | 4 cut(s) | 33, 418, 478, 1198 |
| BstHHI | GCGC | 1 cut(s) | 1590 |
| BstMAI | GTCTC | 2 cut(s) | 1181, 1482 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 387, 1211, 1220 |
| BstNI | CCWGG | 3 cut(s) | 462, 600, 689 |
| BstNSI | RCATGY | 2 cut(s) | 697, 930 |
| BstSCI | CCNGG | 5 cut(s) | 64, 309, 460, 598, 687 |
| BstSNI | TACGTA | 1 cut(s) | 394 |
| BstV1I | GCAGC | 4 cut(s) | 910, 1192, 1195, 1198 |
| BstV2I | GAAGAC | 2 cut(s) | 717, 1329 |
| BstX2I | RGATCY | 4 cut(s) | 139, 560, 1004, 1598 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 40 |
| BstYI | RGATCY | 4 cut(s) | 139, 560, 1004, 1598 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1242, 1431 |
| BsuRI | GGCC | 1 cut(s) | 687 |
| BtgI | CCRYGG | 3 cut(s) | 791, 1031, 1328 |
| BtsCI | GGATG | 4 cut(s) | 33, 418, 478, 1198 |
| BtsI | GCAGTG | 1 cut(s) | 1408 |
| BtsIMutI | CAGTG | 5 cut(s) | 125, 591, 893, 1105, 1408 |
| BveI | ACCTGC | 2 cut(s) | 1063, 1357 |
| CaiI | CAGNNNCTG | 3 cut(s) | 431, 563, 1126 |
| CciI | TCATGA | 1 cut(s) | 1417 |
| CfoI | GCGC | 1 cut(s) | 1590 |
| Cfr13I | GGNCC | 1 cut(s) | 359 |
| Csp6I | GTAC | 3 cut(s) | 18, 467, 726 |
| CviQI | GTAC | 3 cut(s) | 18, 467, 726 |
| DdeI | CTNAG | 3 cut(s) | 571, 1242, 1431 |
| DraI | TTTAAA | 1 cut(s) | 349 |
| EaeI | YGGCCR | 1 cut(s) | 685 |
| Eam1104I | CTCTTC | 2 cut(s) | 402, 849 |
| EarI | CTCTTC | 2 cut(s) | 402, 849 |
| Ecl136II | GAGCTC | 1 cut(s) | 1663 |
| Eco105I | TACGTA | 1 cut(s) | 394 |
| Eco130I | CCWWGG | 5 cut(s) | 682, 791, 1031, 1106, 1328 |
| Eco24I | GRGCYC | 1 cut(s) | 1665 |
| Eco47I | GGWCC | 1 cut(s) | 359 |
| Eco53kI | GAGCTC | 1 cut(s) | 1663 |
| Eco57I | CTGAAG | 2 cut(s) | 6, 1395 |
| Eco81I | CCTNAGG | 2 cut(s) | 1242, 1431 |
| EcoICRI | GAGCTC | 1 cut(s) | 1663 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 686 |
| EcoRI | GAATTC | 1 cut(s) | 1550 |
| EcoRII | CCWGG | 3 cut(s) | 460, 598, 687 |
| EcoT14I | CCWWGG | 5 cut(s) | 682, 791, 1031, 1106, 1328 |
| EcoT38I | GRGCYC | 1 cut(s) | 1665 |
| ErhI | CCWWGG | 5 cut(s) | 682, 791, 1031, 1106, 1328 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1574, 1606 |
| FaqI | GGGAC | 5 cut(s) | 663, 1260, 1475, 1556, 1631 |
| FauI | CCCGC | 1 cut(s) | 1184 |
| FbaI | TGATCA | 1 cut(s) | 1144 |
| Fnu4HI | GCNGC | 4 cut(s) | 924, 1206, 1209, 1212 |
| FokI | GGATG | 4 cut(s) | 20, 425, 485, 1185 |
| FriOI | GRGCYC | 1 cut(s) | 1665 |
| Fsp4HI | GCNGC | 4 cut(s) | 924, 1206, 1209, 1212 |
| FspBI | CTAG | 4 cut(s) | 729, 1016, 1107, 1472 |
| GlaI | GCGC | 1 cut(s) | 1589 |
| GluI | GCNGC | 4 cut(s) | 924, 1206, 1209, 1212 |
| HaeIII | GGCC | 1 cut(s) | 687 |
| HapII | CCGG | 4 cut(s) | 65, 310, 470, 1202 |
| HhaI | GCGC | 1 cut(s) | 1590 |
| Hin6I | GCGC | 1 cut(s) | 1588 |
| HinP1I | GCGC | 1 cut(s) | 1588 |
| HinfI | GANTC | 5 cut(s) | 437, 457, 476, 782, 1475 |
| HpaII | CCGG | 4 cut(s) | 65, 310, 470, 1202 |
| HphI | GGTGA | 5 cut(s) | 299, 497, 878, 1369, 1591 |
| Hpy166II | GTNNAC | 3 cut(s) | 467, 811, 869 |
| Hpy188III | TCNNGA | 3 cut(s) | 1186, 1418, 1430 |
| Hpy8I | GTNNAC | 3 cut(s) | 467, 811, 869 |
| HpyAV | CCTTC | 6 cut(s) | 16, 218, 249, 634, 731, 1576 |
| HpyCH4III | ACNGT | 2 cut(s) | 120, 230 |
| HpyCH4IV | ACGT | 2 cut(s) | 393, 1612 |
| HpyCH4V | TGCA | 9 cut(s) | 195, 416, 544, 926, 968, 1120, 1214, 1336, 1525 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 387, 1211, 1220 |
| HpyF3I | CTNAG | 3 cut(s) | 571, 1242, 1431 |
| HpySE526I | ACGT | 2 cut(s) | 393, 1612 |
| HspAI | GCGC | 1 cut(s) | 1588 |
| Ksp22I | TGATCA | 1 cut(s) | 1144 |
| LmnI | GCTCC | 3 cut(s) | 502, 581, 1243 |
| Lsp1109I | GCAGC | 4 cut(s) | 910, 1192, 1195, 1198 |
| LweI | GCATC | 4 cut(s) | 190, 403, 1223, 1498 |
| MaeI | CTAG | 4 cut(s) | 729, 1016, 1107, 1472 |
| MaeII | ACGT | 2 cut(s) | 393, 1612 |
| MaeIII | GTNAC | 6 cut(s) | 71, 185, 442, 929, 952, 1406 |
| MboII | GAAGA | 8 cut(s) | 268, 419, 587, 722, 746, 866, 1334, 1372 |
| MfeI | CAATTG | 1 cut(s) | 672 |
| MflI | RGATCY | 4 cut(s) | 139, 560, 1004, 1598 |
| MhlI | GDGCHC | 2 cut(s) | 499, 1665 |
| MlsI | TGGCCA | 1 cut(s) | 687 |
| MluNI | TGGCCA | 1 cut(s) | 687 |
| MlyI | GAGTC | 1 cut(s) | 1484 |
| MmeI | TCCRAC | 3 cut(s) | 117, 197, 726 |
| Mox20I | TGGCCA | 1 cut(s) | 687 |
| MroXI | GAANNNNTTC | 1 cut(s) | 283 |
| MscI | TGGCCA | 1 cut(s) | 687 |
| MseI | TTAA | 5 cut(s) | 321, 329, 348, 1260, 1530 |
| MslI | CAYNNNNRTG | 1 cut(s) | 131 |
| Msp20I | TGGCCA | 1 cut(s) | 687 |
| MspA1I | CMGCKG | 1 cut(s) | 1403 |
| MspI | CCGG | 4 cut(s) | 65, 310, 470, 1202 |
| MspR9I | CCNGG | 5 cut(s) | 66, 311, 462, 600, 689 |
| MssI | GTTTAAAC | 1 cut(s) | 349 |
| MunI | CAATTG | 1 cut(s) | 672 |
| MvaI | CCWGG | 3 cut(s) | 462, 600, 689 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 387, 1211, 1220 |
| NciI | CCSGG | 2 cut(s) | 66, 311 |
| NcoI | CCATGG | 3 cut(s) | 791, 1031, 1328 |
| NlaIV | GGNNCC | 3 cut(s) | 577, 1371, 1600 |
| NmeAIII | GCCGAG | 1 cut(s) | 30 |
| NmuCI | GTSAC | 2 cut(s) | 71, 1406 |
| NspI | RCATGY | 2 cut(s) | 697, 930 |
| PagI | TCATGA | 1 cut(s) | 1417 |
| PaqCI | CACCTGC | 1 cut(s) | 1357 |
| PdmI | GAANNNNTTC | 1 cut(s) | 283 |
| PfeI | GAWTC | 4 cut(s) | 437, 457, 476, 782 |
| PkrI | GCNGC | 4 cut(s) | 925, 1207, 1210, 1213 |
| PleI | GAGTC | 1 cut(s) | 1483 |
| PmeI | GTTTAAAC | 1 cut(s) | 349 |
| PpsI | GAGTC | 1 cut(s) | 1483 |
| Ppu21I | YACGTR | 1 cut(s) | 394 |
| Psp124BI | GAGCTC | 1 cut(s) | 1665 |
| Psp6I | CCWGG | 3 cut(s) | 460, 598, 687 |
| PspGI | CCWGG | 3 cut(s) | 460, 598, 687 |
| PspN4I | GGNNCC | 3 cut(s) | 577, 1371, 1600 |
| PspPI | GGNCC | 1 cut(s) | 359 |
| PstNI | CAGNNNCTG | 3 cut(s) | 431, 563, 1126 |
| PsuI | RGATCY | 4 cut(s) | 139, 560, 1004, 1598 |
| PvuII | CAGCTG | 1 cut(s) | 1403 |
| RsaI | GTAC | 3 cut(s) | 19, 468, 727 |
| RsaNI | GTAC | 3 cut(s) | 18, 467, 726 |
| RseI | CAYNNNNRTG | 1 cut(s) | 131 |
| SacI | GAGCTC | 1 cut(s) | 1665 |
| SaqAI | TTAA | 5 cut(s) | 321, 329, 348, 1260, 1530 |
| SatI | GCNGC | 4 cut(s) | 924, 1206, 1209, 1212 |
| Sau96I | GGNCC | 1 cut(s) | 359 |
| SchI | GAGTC | 1 cut(s) | 1484 |
| ScrFI | CCNGG | 5 cut(s) | 66, 311, 462, 600, 689 |
| SduI | GDGCHC | 2 cut(s) | 499, 1665 |
| SfaNI | GCATC | 4 cut(s) | 190, 403, 1223, 1498 |
| SinI | GGWCC | 1 cut(s) | 359 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 131 |
| SmlI | CTYRAG | 2 cut(s) | 1479, 1664 |
| SmoI | CTYRAG | 2 cut(s) | 1479, 1664 |
| SnaBI | TACGTA | 1 cut(s) | 394 |
| SsiI | CCGC | 1 cut(s) | 1177 |
| SspI | AATATT | 2 cut(s) | 421, 1026 |
| SspMI | CTAG | 4 cut(s) | 729, 1016, 1107, 1472 |
| SstI | GAGCTC | 1 cut(s) | 1665 |
| StyD4I | CCNGG | 5 cut(s) | 64, 309, 460, 598, 687 |
| StyI | CCWWGG | 5 cut(s) | 682, 791, 1031, 1106, 1328 |
| TaaI | ACNGT | 2 cut(s) | 120, 230 |
| TaiI | ACGT | 2 cut(s) | 396, 1615 |
| TaqI | TCGA | 1 cut(s) | 1185 |
| TatI | WGTACW | 1 cut(s) | 17 |
| TfiI | GAWTC | 4 cut(s) | 437, 457, 476, 782 |
| Tru1I | TTAA | 5 cut(s) | 321, 329, 348, 1260, 1530 |
| Tru9I | TTAA | 5 cut(s) | 321, 329, 348, 1260, 1530 |
| TscAI | CASTG | 5 cut(s) | 125, 591, 900, 1105, 1415 |
| TseFI | GTSAC | 2 cut(s) | 71, 1406 |
| TseI | GCWGC | 4 cut(s) | 923, 1205, 1208, 1211 |
| Tsp45I | GTSAC | 2 cut(s) | 71, 1406 |
| TspDTI | ATGAA | 8 cut(s) | 249, 489, 606, 653, 795, 838, 1437, 1543 |
| TspRI | CASTG | 5 cut(s) | 125, 591, 900, 1105, 1415 |
| VpaK11BI | GGWCC | 1 cut(s) | 359 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 686 |
| XapI | RAATTY | 3 cut(s) | 533, 1079, 1550 |
| XceI | RCATGY | 2 cut(s) | 697, 930 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 133 |
| XmaJI | CCTAGG | 1 cut(s) | 1106 |
| XmnI | GAANNNNTTC | 1 cut(s) | 283 |
| XspI | CTAG | 4 cut(s) | 729, 1016, 1107, 1472 |