MD07G1025100.v1.1

Alpha/beta hydrolase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
2101754 .. 2104752
2999 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1025100.v1.1.491

Sequence Viewer

Length: 1560 bp
ATGGAAACACTCTCATACAGTTCTGCACCGTGCTGTGATGCTGTAAATTTAAGGGGAAAATTAGTAGAGAAAAGCTCAAATTTACGTCGATTCGGGCTCCCAGATGTTAGTAAAAAAGGAGTTAGTGGTGTTCAATTTGATCCCAGAAGCGAGCTTTTGAGGTGTTACAGTTTAGATCGGTCTTTCTTGAAGCAACTAAGATACCGGGGAGGTTTTAGGTCATTGAACACCAGTGAAAACTTCAAGCATGTTGGTCCGGTTTTATCAAGTGGAAGCTCGAATGGCTATGTAATTGGCGCGGATGAGGATGCAAATGTTTCAGAAACGGCGGAATCCGTTACTAAGGTTTTGATTCCTGGTCTACCGGATGAATCCAAAGGCGAATTTGGTGCCCCAGTGAGTAGTTGTTTTTGGGAATGGAAGCCCAAGTTCAATGTGCATTACGAGAAAGCCGGATGTGAGAACTTGGGATCCCCTCCGGTGCTGTTTCTTCCTGGTTTTGGGGTTGGCTCTTTTCACTACGAGAAGCAACTGAAAGATTTGGGGCGTGATTTTAGAGTGTGGGCAATTGATTTCCTCGGGCAGGGTAGGTCATTGCCTTTTGAGGACCCTGCCCCTCGTAAGAGCGAAGAAGGTATGTCCGACGGCCAAGATTTAGCGTGGGGTTTTGGAGAAAAACCCGAACCATGGGCAAGCGAGCTTGTCTACTCTATTGACTTATGGCAGGATCAAGTTCGTTACTTCATAGAAGAGGTAATCGGTGAACCTGTCTATATTGCGGGGAACTCGCTAGGAGGATTTGTTGCTTTGTATTTTGCTGCATGTAACCCTCATTTGGTGAAAGGTGTTACCTTGCTGAATGCAACTCCTTTCTGGGGATTTTTACCTAATCCCGTAAGATCTCCAAGACTAGCAAAAATATTCCCGTCTGCAGGATCATTTCCTTTACCTGCCAGTGTGAGAAAGATCACAGAAATACTTTGGCAAAAAATAAGTGATCCTCAGAGTATTGCAGAGGTACTCAAACAAGTTTATGCAGATCATTCAACAAACATTGACAAAGTATTTTCCCGTATACTTGAGACGTCAGAGCATCCAGCCGCTGCTGCATCATTGGCCTCGATTATGCTTGCTCCTCAAGGAAGATTATCCTTTAAGGAGGCTTTGGCCAGATGTCAAATGAACAACATACCAATCTGTCTTATGTATGGAAAAGAAGATCCATGGGTGAAACCTATTTGGGGCCTTCAGGTGAAGCAACAGGTGCCTGAAGCTCCATATTACGAGATCAGTCCCGCTGGTCACTGCCCTCATGATGAAGTTCCGGAGGTTGTGAATTACTTGTTACGCGGGTGGATCAAAAACCTAGAGACTGAGGGTTCAGTTGCATTACCTTTGCTTGATGCCCCTGAAGGTATGCCGAACAACCTTGCCAAGGACTTGGAATTTCTCAGAGATGGATCGGAAAAGTCAGTAAACGTGCGGTTCTTCGCATCCAGGTTCTCACTTTGGGACATGATAAGTTCTTATATCAGATTCATGAACCTGCAACGAAGATAA

Protein Analysis

520

Amino Acids

57.87

Weight (kDa)

5.89

Isoelectric Point (pI)

49.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 159 - 294 1.4e-14 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 161 - 445 9.6e-19 Alpha/beta hydrolase family
Hydrolase_4 PF12146 161 - 412 4.5e-06 Serine aminopeptidase, S33
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1088
Acc36I ACCTGC 2 cut(s) 958, 1554
AccB1I GGYRCC 2 cut(s) 389, 1264
AccI GTMKAC 3 cut(s) 361, 705, 1075
AccII CGCG 2 cut(s) 299, 1350
AccIII TCCGGA 1 cut(s) 1324
AciI CCGC 7 cut(s) 299, 329, 779, 1101, 1296, 1350, 1483
AclWI GGATC 9 cut(s) 134, 465, 478, 735, 943, 992, 1214, 1364, 1468
AcoI YGGCCR 2 cut(s) 646, 1167
AcsI RAATTY 4 cut(s) 46, 79, 383, 1445
AcuI CTGAAG 3 cut(s) 1232, 1290, 1431
AcyI GRCGYC 1 cut(s) 1085
AfaI GTAC 1 cut(s) 1020
AfiI CCNNNNNNNGG 8 cut(s) 500, 583, 687, 835, 875, 932, 1241, 1435
AgsI TTSAA 6 cut(s) 134, 190, 226, 244, 433, 1047
AjnI CCWGG 3 cut(s) 355, 493, 1496
AloI GAACNNNNNNTCC 2 cut(s) 455, 487
AluBI AGCT 5 cut(s) 75, 154, 276, 700, 1274
AluI AGCT 5 cut(s) 75, 154, 276, 700, 1274
Alw26I GTCTC 2 cut(s) 1076, 1364
AlwI GGATC 9 cut(s) 134, 465, 478, 735, 943, 992, 1214, 1364, 1468
AlwNI CAGNNNCTG 1 cut(s) 1103
Ama87I CYCGRG 1 cut(s) 578
Aor13HI TCCGGA 1 cut(s) 1324
AoxI GGCC 4 cut(s) 646, 1116, 1167, 1243
ApeKI GCWGC 3 cut(s) 818, 1103, 1106
ApoI RAATTY 4 cut(s) 46, 79, 383, 1445
AspLEI GCGC 1 cut(s) 299
AspS9I GGNCC 3 cut(s) 254, 607, 1243
AsuC2I CCSGG 1 cut(s) 206
AsuHPI GGTGA 4 cut(s) 773, 850, 1240, 1264
AvaI CYCGRG 1 cut(s) 578
AvaII GGWCC 2 cut(s) 254, 607
BaeGI GKGCMC 1 cut(s) 394
BalI TGGCCA 1 cut(s) 1169
BamHI GGATCC 1 cut(s) 470
BanI GGYRCC 2 cut(s) 389, 1264
BanII GRGCYC 1 cut(s) 99
BbvI GCAGC 3 cut(s) 805, 1090, 1093
BccI CCATC 1 cut(s) 1451
BceAI ACGGC 2 cut(s) 342, 661
BcgI CGANNNNNNTGC 2 cut(s) 371, 405
BciT130I CCWGG 3 cut(s) 357, 495, 1498
BcnI CCSGG 1 cut(s) 206
BcoDI GTCTC 2 cut(s) 1076, 1364
BfaI CTAG 3 cut(s) 791, 911, 1367
BfmI CTRYAG 1 cut(s) 930
BfuAI ACCTGC 2 cut(s) 958, 1554
BglII AGATCT 1 cut(s) 899
BisI GCNGC 4 cut(s) 819, 1101, 1104, 1107
BlsI GCNGC 4 cut(s) 820, 1102, 1105, 1108
Bme1390I CCNGG 4 cut(s) 206, 357, 495, 1498
Bme18I GGWCC 2 cut(s) 254, 607
BmeT110I CYCGRG 1 cut(s) 578
BmgT120I GGNCC 3 cut(s) 254, 607, 1243
BmiI GGNNCC 6 cut(s) 98, 391, 472, 609, 1244, 1266
BmrFI CCNGG 4 cut(s) 206, 357, 495, 1498
BmrI ACTGGG 1 cut(s) 389
BmsI GCATC 6 cut(s) 28, 298, 1102, 1118, 1393, 1502
BmuI ACTGGG 1 cut(s) 389
BplI GAGNNNNNCTC 2 cut(s) 59, 91
BpuEI CTTGAG 2 cut(s) 1100, 1122
BpuMI CCSGG 1 cut(s) 206
BsaHI GRCGYC 1 cut(s) 1085
BsaJI CCNNGG 5 cut(s) 205, 577, 686, 1223, 1434
BsaWI WCCGGW 4 cut(s) 256, 364, 478, 1324
BsaXI ACNNNNNCTCC 2 cut(s) 786, 816
Bsc4I CCNNNNNNNGG 8 cut(s) 500, 583, 687, 835, 875, 932, 1241, 1435
Bse1I ACTGG 3 cut(s) 231, 395, 954
Bse3DI GCAATG 1 cut(s) 593
BseAI TCCGGA 1 cut(s) 1324
BseBI CCWGG 3 cut(s) 357, 495, 1498
BseDI CCNNGG 5 cut(s) 205, 577, 686, 1223, 1434
BseGI GGATG 6 cut(s) 307, 313, 373, 461, 1093, 1493
BseLI CCNNNNNNNGG 8 cut(s) 500, 583, 687, 835, 875, 932, 1241, 1435
BseMI GCAATG 1 cut(s) 593
BseMII CTCAG 3 cut(s) 1016, 1365, 1465
BseNI ACTGG 3 cut(s) 231, 395, 954
BseRI GAGGAG 1 cut(s) 1125
BseSI GKGCMC 1 cut(s) 394
BseXI GCAGC 3 cut(s) 805, 1090, 1093
BsgI GTGCAG 1 cut(s) 9
Bsh1236I CGCG 2 cut(s) 299, 1350
BshFI GGCC 4 cut(s) 648, 1118, 1169, 1245
BshNI GGYRCC 2 cut(s) 389, 1264
BsiHKCI CYCGRG 1 cut(s) 578
BsiSI CCGG 6 cut(s) 205, 257, 365, 453, 479, 1325
BslFI GGGAC 2 cut(s) 1278, 1526
BslI CCNNNNNNNGG 8 cut(s) 500, 583, 687, 835, 875, 932, 1241, 1435
BsmAI GTCTC 2 cut(s) 1076, 1364
BsmBI CGTCTC 1 cut(s) 1076
BsmFI GGGAC 2 cut(s) 1278, 1526
BsmI GAATGC 1 cut(s) 865
BsnI GGCC 4 cut(s) 648, 1118, 1169, 1245
BsoBI CYCGRG 1 cut(s) 578
Bsp1286I GDGCHC 2 cut(s) 99, 394
Bsp13I TCCGGA 1 cut(s) 1324
Bsp19I CCATGG 2 cut(s) 686, 1223
BspACI CCGC 7 cut(s) 299, 329, 779, 1101, 1296, 1350, 1483
BspANI GGCC 4 cut(s) 648, 1118, 1169, 1245
BspCNI CTCAG 3 cut(s) 1015, 1366, 1464
BspEI TCCGGA 1 cut(s) 1324
BspFNI CGCG 2 cut(s) 299, 1350
BspHI TCATGA 2 cut(s) 1312, 1539
BspLI GGNNCC 6 cut(s) 98, 391, 472, 609, 1244, 1266
BspMAI CTGCAG 1 cut(s) 934
BspMI ACCTGC 2 cut(s) 958, 1554
BspPI GGATC 9 cut(s) 134, 465, 478, 735, 943, 992, 1214, 1364, 1468
BspT107I GGYRCC 2 cut(s) 389, 1264
BsrDI GCAATG 1 cut(s) 593
BsrI ACTGG 3 cut(s) 231, 395, 954
BssECI CCNNGG 5 cut(s) 205, 577, 686, 1223, 1434
BssNAI GTATAC 1 cut(s) 1076
BssNI GRCGYC 1 cut(s) 1085
BssT1I CCWWGG 3 cut(s) 686, 1223, 1434
Bst1107I GTATAC 1 cut(s) 1076
Bst2UI CCWGG 3 cut(s) 357, 495, 1498
Bst4CI ACNGT 3 cut(s) 20, 30, 170
Bst6I CTCTTC 1 cut(s) 744
BstACI GRCGYC 1 cut(s) 1085
BstAPI GCANNNNNTGC 1 cut(s) 1264
BstC8I GCNNGC 4 cut(s) 152, 694, 698, 1131
BstDEI CTNAG 5 cut(s) 197, 342, 1002, 1374, 1451
BstDSI CCRYGG 2 cut(s) 686, 1223
BstENI CCTNNNNNAGG 2 cut(s) 581, 1433
BstF5I GGATG 6 cut(s) 307, 313, 373, 461, 1093, 1493
BstFNI CGCG 2 cut(s) 299, 1350
BstHHI GCGC 1 cut(s) 299
BstMAI GTCTC 2 cut(s) 1076, 1364
BstMWI GCNNNNNNNGC 4 cut(s) 282, 1106, 1115, 1264
BstNI CCWGG 3 cut(s) 357, 495, 1498
BstNSI RCATGY 2 cut(s) 251, 825
BstSCI CCNGG 4 cut(s) 204, 355, 493, 1496
BstSFI CTRYAG 1 cut(s) 930
BstSLI GKGCMC 1 cut(s) 394
BstUI CGCG 2 cut(s) 299, 1350
BstV1I GCAGC 3 cut(s) 805, 1090, 1093
BstX2I RGATCY 3 cut(s) 470, 899, 1219
BstXI CCANNNNNNTGG 1 cut(s) 1441
BstYI RGATCY 3 cut(s) 470, 899, 1219
BstZ17I GTATAC 1 cut(s) 1076
BsuRI GGCC 4 cut(s) 648, 1118, 1169, 1245
BtgI CCRYGG 2 cut(s) 686, 1223
BtsCI GGATG 6 cut(s) 307, 313, 373, 461, 1093, 1493
BtsI GCAGTG 1 cut(s) 1303
BtsIMutI CAGTG 4 cut(s) 238, 402, 961, 1303
BveI ACCTGC 2 cut(s) 958, 1554
Cac8I GCNNGC 4 cut(s) 152, 694, 698, 1131
CaiI CAGNNNCTG 1 cut(s) 1103
CciI TCATGA 2 cut(s) 1312, 1539
CfoI GCGC 1 cut(s) 299
Cfr13I GGNCC 3 cut(s) 254, 607, 1243
Csp6I GTAC 1 cut(s) 1019
CviAII CATG 7 cut(s) 248, 687, 822, 1224, 1313, 1516, 1540
CviQI GTAC 1 cut(s) 1019
DdeI CTNAG 5 cut(s) 197, 342, 1002, 1374, 1451
EaeI YGGCCR 2 cut(s) 646, 1167
Eam1104I CTCTTC 1 cut(s) 744
EarI CTCTTC 1 cut(s) 744
EciI GGCGGA 1 cut(s) 344
Eco130I CCWWGG 3 cut(s) 686, 1223, 1434
Eco24I GRGCYC 1 cut(s) 99
Eco47I GGWCC 2 cut(s) 254, 607
Eco57I CTGAAG 3 cut(s) 1232, 1290, 1431
Eco88I CYCGRG 1 cut(s) 578
EcoNI CCTNNNNNAGG 2 cut(s) 581, 1433
EcoO109I RGGNCCY 2 cut(s) 607, 1243
EcoRII CCWGG 3 cut(s) 355, 493, 1496
EcoT14I CCWWGG 3 cut(s) 686, 1223, 1434
EcoT38I GRGCYC 1 cut(s) 99
ErhI CCWWGG 3 cut(s) 686, 1223, 1434
Esp3I CGTCTC 1 cut(s) 1076
FaeI CATG 7 cut(s) 251, 690, 825, 1227, 1316, 1519, 1543
FaqI GGGAC 2 cut(s) 1278, 1526
FatI CATG 7 cut(s) 247, 686, 821, 1223, 1312, 1515, 1539
FauI CCCGC 3 cut(s) 772, 1303, 1343
FblI GTMKAC 3 cut(s) 361, 705, 1075
Fnu4HI GCNGC 4 cut(s) 819, 1101, 1104, 1107
FokI GGATG 6 cut(s) 314, 320, 380, 468, 1080, 1480
FriOI GRGCYC 1 cut(s) 99
Fsp4HI GCNGC 4 cut(s) 819, 1101, 1104, 1107
FspBI CTAG 3 cut(s) 791, 911, 1367
GlaI GCGC 1 cut(s) 298
GluI GCNGC 4 cut(s) 819, 1101, 1104, 1107
HaeIII GGCC 4 cut(s) 648, 1118, 1169, 1245
HapII CCGG 6 cut(s) 205, 257, 365, 453, 479, 1325
HhaI GCGC 1 cut(s) 299
Hin1I GRCGYC 1 cut(s) 1085
Hin1II CATG 7 cut(s) 251, 690, 825, 1227, 1316, 1519, 1543
Hin6I GCGC 1 cut(s) 297
HinP1I GCGC 1 cut(s) 297
HinfI GANTC 5 cut(s) 90, 332, 352, 371, 1536
HpaII CCGG 6 cut(s) 205, 257, 365, 453, 479, 1325
HphI GGTGA 4 cut(s) 773, 850, 1240, 1264
Hpy166II GTNNAC 5 cut(s) 362, 706, 764, 1076, 1477
Hpy188I TCNGA 7 cut(s) 322, 643, 1005, 1090, 1454, 1465, 1535
Hpy188III TCNNGA 4 cut(s) 187, 1313, 1325, 1540
Hpy8I GTNNAC 5 cut(s) 362, 706, 764, 1076, 1477
Hpy99I CGWCG 2 cut(s) 90, 647
HpyAV CCTTC 3 cut(s) 626, 1256, 1406
HpyCH4III ACNGT 3 cut(s) 20, 30, 170
HpyCH4IV ACGT 3 cut(s) 85, 1085, 1479
HpyF10VI GCNNNNNNNGC 4 cut(s) 282, 1106, 1115, 1264
HpyF3I CTNAG 5 cut(s) 197, 342, 1002, 1374, 1451
HpySE526I ACGT 3 cut(s) 85, 1085, 1479
Hsp92I GRCGYC 1 cut(s) 1085
Hsp92II CATG 7 cut(s) 251, 690, 825, 1227, 1316, 1519, 1543
HspAI GCGC 1 cut(s) 297
Kpn2I TCCGGA 1 cut(s) 1324
LmnI GCTCC 3 cut(s) 102, 1138, 1279
Lsp1109I GCAGC 3 cut(s) 805, 1090, 1093
LweI GCATC 6 cut(s) 28, 298, 1102, 1118, 1393, 1502
MaeI CTAG 3 cut(s) 791, 911, 1367
MaeII ACGT 3 cut(s) 85, 1085, 1479
MaeIII GTNAC 7 cut(s) 164, 337, 737, 824, 847, 1301, 1344
MboII GAAGA 6 cut(s) 482, 641, 761, 1155, 1229, 1480
MfeI CAATTG 1 cut(s) 567
MflI RGATCY 3 cut(s) 470, 899, 1219
MhlI GDGCHC 2 cut(s) 99, 394
MlsI TGGCCA 1 cut(s) 1169
MluCI AATT 9 cut(s) 46, 59, 79, 134, 291, 383, 567, 1336, 1445
MluNI TGGCCA 1 cut(s) 1169
MmeI TCCRAC 1 cut(s) 666
Mox20I TGGCCA 1 cut(s) 1169
MroI TCCGGA 1 cut(s) 1324
MscI TGGCCA 1 cut(s) 1169
MseI TTAA 2 cut(s) 50, 1155
Msp20I TGGCCA 1 cut(s) 1169
MspA1I CMGCKG 2 cut(s) 1103, 1298
MspI CCGG 6 cut(s) 205, 257, 365, 453, 479, 1325
MspR9I CCNGG 4 cut(s) 206, 357, 495, 1498
MunI CAATTG 1 cut(s) 567
Mva1269I GAATGC 1 cut(s) 865
MvaI CCWGG 3 cut(s) 357, 495, 1498
MvnI CGCG 2 cut(s) 299, 1350
MwoI GCNNNNNNNGC 4 cut(s) 282, 1106, 1115, 1264
NciI CCSGG 1 cut(s) 206
NcoI CCATGG 2 cut(s) 686, 1223
NlaIII CATG 7 cut(s) 251, 690, 825, 1227, 1316, 1519, 1543
NlaIV GGNNCC 6 cut(s) 98, 391, 472, 609, 1244, 1266
NmuCI GTSAC 1 cut(s) 1301
NspI RCATGY 2 cut(s) 251, 825
PagI TCATGA 2 cut(s) 1312, 1539
PctI GAATGC 1 cut(s) 865
PfeI GAWTC 5 cut(s) 90, 332, 352, 371, 1536
PkrI GCNGC 4 cut(s) 820, 1102, 1105, 1108
PpuMI RGGWCCY 1 cut(s) 607
Psp5II RGGWCCY 1 cut(s) 607
Psp6I CCWGG 3 cut(s) 355, 493, 1496
PspGI CCWGG 3 cut(s) 355, 493, 1496
PspN4I GGNNCC 6 cut(s) 98, 391, 472, 609, 1244, 1266
PspPI GGNCC 3 cut(s) 254, 607, 1243
PspPPI RGGWCCY 1 cut(s) 607
PstI CTGCAG 1 cut(s) 934
PstNI CAGNNNCTG 1 cut(s) 1103
PsuI RGATCY 3 cut(s) 470, 899, 1219
RsaI GTAC 1 cut(s) 1020
RsaNI GTAC 1 cut(s) 1019
SaqAI TTAA 2 cut(s) 50, 1155
SatI GCNGC 4 cut(s) 819, 1101, 1104, 1107
Sau96I GGNCC 3 cut(s) 254, 607, 1243
ScrFI CCNGG 4 cut(s) 206, 357, 495, 1498
SduI GDGCHC 2 cut(s) 99, 394
SfaNI GCATC 6 cut(s) 28, 298, 1102, 1118, 1393, 1502
SfcI CTRYAG 1 cut(s) 930
SinI GGWCC 2 cut(s) 254, 607
SmlI CTYRAG 2 cut(s) 1079, 1137
SmoI CTYRAG 2 cut(s) 1079, 1137
Sse9I AATT 9 cut(s) 46, 59, 79, 134, 291, 383, 567, 1336, 1445
SsiI CCGC 7 cut(s) 299, 329, 779, 1101, 1296, 1350, 1483
SspI AATATT 1 cut(s) 921
SspMI CTAG 3 cut(s) 791, 911, 1367
StyD4I CCNGG 4 cut(s) 204, 355, 493, 1496
StyI CCWWGG 3 cut(s) 686, 1223, 1434
TaaI ACNGT 3 cut(s) 20, 30, 170
TaiI ACGT 3 cut(s) 88, 1088, 1482
TaqI TCGA 3 cut(s) 88, 278, 1121
TaqII GACCGA 1 cut(s) 168
TasI AATT 9 cut(s) 46, 59, 79, 134, 291, 383, 567, 1336, 1445
TauI GCSGC 1 cut(s) 1103
TfiI GAWTC 5 cut(s) 90, 332, 352, 371, 1536
Tru1I TTAA 2 cut(s) 50, 1155
Tru9I TTAA 2 cut(s) 50, 1155
TscAI CASTG 4 cut(s) 238, 402, 961, 1310
TseFI GTSAC 1 cut(s) 1301
TseI GCWGC 3 cut(s) 818, 1103, 1106
Tsp45I GTSAC 1 cut(s) 1301
TspDTI ATGAA 6 cut(s) 384, 733, 1196, 1332, 1528, 1556
TspGWI ACGGA 1 cut(s) 325
TspRI CASTG 4 cut(s) 238, 402, 961, 1310
VpaK11BI GGWCC 2 cut(s) 254, 607
XagI CCTNNNNNAGG 2 cut(s) 581, 1433
XapI RAATTY 4 cut(s) 46, 79, 383, 1445
XceI RCATGY 2 cut(s) 251, 825
XmiI GTMKAC 3 cut(s) 361, 705, 1075
XspI CTAG 3 cut(s) 791, 911, 1367
ZraI GACGTC 1 cut(s) 1086
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.