Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0006139

Physical Location & Seq

Genomic Coordinates Reverse (-)

36967808 .. 36974373

Gene Structure 6566 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1314400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGGGGAGCGTGGATCGAGTCGATGATAGGACCTTTAGGGTTAATTTGACGGGCGATTCAGTCATCAAGTTGAGAGAGAGTGTGAGAGAGAAGCTTAAGGAGTTCATGGGGGATTACACCGACGACACTCTTGTGGAATACGTTATTGTCCTTCTAAAGAATGGCAGGGGCAAAGAAGAAGCAAAGAATGAGCTGAACGTGTTTTTGGGGGATGACAGTGATTCTTTTGTTTCTTGGTTGTGGGGTCATCTGGCTTCAAATTCGGATTTGCATCTACAATCAGAGGATCCTGAGGTGGAAGATGTGAGTAAAAGAAAAACCACATCAGGTGACCTTACAGGAAAAAGTGATTTGTATCATTTGGGTTCTGAGCCAGAAAGGGAGAAGTCTAATAAGTCAACTAAAAGCCGGCACACTAGAGAATGGAAAGGGCTAACAAGGGATGCAGCTGAGCCCCCTCCTTTTCGAAGCTCTGAGATCGGAGATATTCATGTAGAAGAAAAAAGTCGTAGCAAAGTCAGTGATGCGAAGTCTCCTTCGCGTCAACCTGCAGCTCAAAGGAAAAGGATTCGGCCTGATGAGCGACACAATACAGAGGGGAGGGAACCAGTTTCTGAAGTGACTATTGATGCCCCTCGACGGCTACTCCAATTTGCTATGCGTGATGCATTAACGACCTCAAGGCAATCCAATTCAGCAACTCAGCCCACGTTGAAGCGTCTTCGTTCTGTGGTATCTAAACCCACTGTTGACTCATCATTGGTTGATCGTCCTCGACGGATTCAGTCTGTCGCCAGGGTGCCAAATCCCATGTCAACTGTAATGAAAGCTGTTGCAGAAGCTGCTGAAGATGTAACAAGAGTTAAACCTTCAAGGAGTGTGTTTGACCGACTAGGTCGTGGTATGGAGTTTTCTGAGACCAGTGTGCCTCTTGCACCATCCAGAGATGCTGCTACCGAGGATGTTGAATTTGAAGATGTCGTCCAACTTAATGAACAAAAACGATCGTCATATCCGGCTAGAAGTGAATACAGTGGACAGTATGTAGGGAATGCTATGTTAGAAAGTGAAACTGGTTTGGCTTCTGATTTTGTATCGGACAATGAAGGGTTTGATGATGTTAATGTTATGGGTCGTATAGTTACTGATGTTTCTCAAACTGGGACATCTGGTGGAAGCAAGGCTGAAAATTTACTAATGGCGCGTTACAATGTGGCGAAGAATGTTGATGATGTTATGCAGCTATCCAGGAATAAAGATCACGGTCAATCTTTTGCAGCTGCGAATTCTTCTCATAAGATTGTGAATATATCTGTGAATGTCAATACTTGGAAAGCACCCCATTATCAGGAGCCAAGAGAAGTTGCTGGTGATGATTGGAAATCCCTACAGAATAGTGAGGCAGGGGTTGCCAAATCTGGTTTGCATGTGATGAAGGAGAACGGCAATCCTGTTGGAGCAAGTAATGGAAATGTAACACCTGCTGCAGATTCTCCTAAGATGCTTTCCTCTTCTGCTGGTCTATATGCCAGTGGACGCCCATTGGAGGATGCAGATTGTCGAACTATCTTTGTTAACAATGTCCACTTTGCTGCTACAAAAGATAGTCTTTCTCGACATTTCAACAAGTTTGGGGAAGTGCTAAAAGTAGTGATAGTTACTGATGCAGCAACTGGGCAGCCTAAAGGGTCAGCTTACGTAGAGTTCACACGGAGGGAGGCCGCAGACAATGCATTATCTCTGGACGGAACCTCTTTCATGTCAAGGATCCTCAAGGTTGTAAAGAGGGGAGCTGCACATCAAGAAGCAGCTCCGGGCATGACGTGGCCAAGGGTTGCCCGGGGCACTCCATTTGCCACTGCCAGGTTTGGTTGGTCCCCATTCCAGAGAGGCATGTCTGGTGCATATAGGCCTCGCCCCCTAATCAAACCTGGTGCCAGGAGCATGCAGTGGAAGCGTGATACTCAGGCCAATCCAGGTGAGATGGGTGCTCCAGTCACTGCCACTGCTGTTCCTTCACCAACAGCTCGCAGTCTTAACCTATGTTCGAACAGAACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0002237 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010033 GO:0016234 GO:0016310 GO:0019538 GO:0019899 GO:0023014 GO:0023052 GO:0032496 GO:0032991 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0042405 GO:0043085 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051338 GO:0051347 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0065009 GO:0070063 GO:0070887 GO:0071216 GO:0071219 GO:0071222 GO:0071310 GO:0071396 GO:0071704 GO:1901564 GO:1901700 GO:1901701 GO:1904245 GO:1904247 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PWI RRM_1

Protein Analysis

687

Amino Acids

75.36

Weight (kDa)

8.83

Isoelectric Point (pI)

47.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PWI	PF01480	24 - 88	5.8e-07	PWI domain
RRM_1	PF00076	523 - 591	1.5e-17	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006139)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12640 AT3G12640 AT3G12640 AT3G12640
fragaria_vesca	FvH4_7g00830 FvH4_7g00830 FvH4_7g00830
malus_domestica	MD02G1314400.v1.1 MD07G1007800.v1.1
prunus_persica	Prupe.2G010500_v2.0.a1
pyrus_communis	pycom02g26360 pycom07g00640
rosa_chinensis	RchiOBHm_Chr1g0314991
rosa_laevigata	RLG00000030749
rosa_multiflora	Rmu_co8101366.1_g000001 Rmu_co8205378.1_g000001 Rmu_sc0004180.1_g000037 Rmu_sc0017414.1_g000001 Rmu_sc0023178.1_g000001 Rmu_sc0036535.1_g000001
rosa_roxburghii	Rroxscaffold_4G00331600
rosa_rugosa	Rorug01G0004200
rosa_samantha	Rh1AG014700 Rh1BG007100 Rh1CG013000 Rh1DG008500
rosa_wichuraiana	Rw1G000730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1489
Acc36I	ACCTGC	2 cut(s)	556, 1489
AccB1I	GGYRCC	2 cut(s)	799, 1934
AccII	CGCG	2 cut(s)	541, 1204
AciI	CCGC	1 cut(s)	1722
AclWI	GGATC	5 cut(s)	21, 281, 294, 1762, 1775
AcoI	YGGCCR	1 cut(s)	1826
AcsI	RAATTY	4 cut(s)	259, 968, 1189, 1285
AcuI	CTGAAG	2 cut(s)	636, 867
AcyI	GRCGYC	1 cut(s)	1537
AfiI	CCNNNNNNNGG	4 cut(s)	639, 1348, 1546, 1863
AflII	CTTAAG	1 cut(s)	95
AflIII	ACRYGT	1 cut(s)	198
AgsI	TTSAA	6 cut(s)	258, 715, 873, 968, 974, 1624
AjiI	CACGTC	1 cut(s)	1824
AjnI	CCWGG	6 cut(s)	794, 1247, 1862, 1930, 1937, 1975
AjuI	GAANNNNNNNTTGG	2 cut(s)	188, 220
AleI	CACNNNNGTG	1 cut(s)	131
Alw21I	GWGCWC	1 cut(s)	1993
Alw26I	GTCTC	2 cut(s)	537, 911
AlwI	GGATC	5 cut(s)	21, 281, 294, 1762, 1775
AlwNI	CAGNNNCTG	4 cut(s)	614, 842, 1673, 2000
Ama87I	CYCGRG	1 cut(s)	1839
AoxI	GGCC	5 cut(s)	572, 1719, 1826, 1910, 1968
ApoI	RAATTY	4 cut(s)	259, 968, 1189, 1285
ArsI	GACNNNNNNTTYG	2 cut(s)	797, 829
AspLEI	GCGC	1 cut(s)	1204
AspS9I	GGNCC	2 cut(s)	30, 1875
AsuC2I	CCSGG	3 cut(s)	1815, 1840, 1841
AsuHPI	GGTGA	4 cut(s)	341, 1382, 1991, 2010
AsuII	TTCGAA	2 cut(s)	466, 2048
AvaI	CYCGRG	1 cut(s)	1839
AvaII	GGWCC	2 cut(s)	30, 1875
AxyI	CCTNAGG	1 cut(s)	291
BaeGI	GKGCMC	1 cut(s)	1847
BalI	TGGCCA	1 cut(s)	1828
BamHI	GGATCC	2 cut(s)	286, 1767
BanI	GGYRCC	2 cut(s)	799, 1934
BanII	GRGCYC	1 cut(s)	456
BbsI	GAAGAC	1 cut(s)	713
Bbv12I	GWGCWC	1 cut(s)	1993
BccI	CCATC	2 cut(s)	946, 1978
BceAI	ACGGC	2 cut(s)	656, 1459
BciT130I	CCWGG	6 cut(s)	796, 1249, 1864, 1932, 1939, 1977
BcnI	CCSGG	3 cut(s)	1815, 1840, 1841
BcoDI	GTCTC	2 cut(s)	537, 911
BfaI	CTAG	3 cut(s)	417, 893, 1020
BfmI	CTRYAG	3 cut(s)	549, 1388, 1485
BfrI	CTTAAG	1 cut(s)	95
BfuAI	ACCTGC	2 cut(s)	556, 1489
BlpI	GCTNAGC	1 cut(s)	450
Bme1390I	CCNGG	9 cut(s)	796, 1249, 1815, 1840, 1841, 1864, 1932, 1939, 1977
Bme18I	GGWCC	2 cut(s)	30, 1875
BmeT110I	CYCGRG	1 cut(s)	1839
BmgBI	CACGTC	1 cut(s)	1824
BmgT120I	GGNCC	2 cut(s)	30, 1875
BmiI	GGNNCC	8 cut(s)	288, 606, 801, 1353, 1750, 1769, 1877, 1936
BmrFI	CCNGG	9 cut(s)	796, 1249, 1815, 1840, 1841, 1864, 1932, 1939, 1977
BmrI	ACTGGG	2 cut(s)	1170, 1683
BmsI	GCATC	9 cut(s)	280, 433, 514, 619, 655, 937, 1491, 1540, 1654
BmuI	ACTGGG	2 cut(s)	1170, 1683
BpiI	GAAGAC	1 cut(s)	713
BpmI	CTGGAG	1 cut(s)	1977
Bpu1102I	GCTNAGC	1 cut(s)	450
Bpu14I	TTCGAA	2 cut(s)	466, 2048
BpuEI	CTTGAG	2 cut(s)	664, 1757
BpuMI	CCSGG	3 cut(s)	1815, 1840, 1841
BsaAI	YACGTR	1 cut(s)	1699
BsaBI	GATNNNNATC	2 cut(s)	270, 354
BsaHI	GRCGYC	1 cut(s)	1537
BsaI	GGTCTC	1 cut(s)	911
BsaJI	CCNNGG	5 cut(s)	795, 957, 1829, 1839, 1840
BsaXI	ACNNNNNCTCC	2 cut(s)	630, 660
Bsc4I	CCNNNNNNNGG	4 cut(s)	639, 1348, 1546, 1863
Bse118I	RCCGGY	1 cut(s)	408
Bse1I	ACTGG	7 cut(s)	608, 921, 1078, 1165, 1530, 1678, 1994
Bse21I	CCTNAGG	1 cut(s)	291
Bse8I	GATNNNNATC	2 cut(s)	270, 354
BseBI	CCWGG	6 cut(s)	796, 1249, 1864, 1932, 1939, 1977
BseDI	CCNNGG	5 cut(s)	795, 957, 1829, 1839, 1840
BseGI	GGATG	5 cut(s)	217, 448, 938, 967, 1555
BseJI	GATNNNNATC	2 cut(s)	270, 354
BseLI	CCNNNNNNNGG	4 cut(s)	639, 1348, 1546, 1863
BseMII	CTCAG	7 cut(s)	282, 360, 441, 465, 716, 906, 1979
BseNI	ACTGG	7 cut(s)	608, 921, 1078, 1165, 1530, 1678, 1994
BseSI	GKGCMC	1 cut(s)	1847
BsgI	GTGCAG	1 cut(s)	1779
Bsh1236I	CGCG	2 cut(s)	541, 1204
Bsh1285I	CGRYCG	1 cut(s)	1007
BshFI	GGCC	5 cut(s)	574, 1721, 1828, 1912, 1970
BshNI	GGYRCC	2 cut(s)	799, 1934
BsiEI	CGRYCG	1 cut(s)	1007
BsiHKAI	GWGCWC	1 cut(s)	1993
BsiHKCI	CYCGRG	1 cut(s)	1839
BsiSI	CCGG	4 cut(s)	409, 1016, 1814, 1840
BslFI	GGGAC	2 cut(s)	1177, 1861
BslI	CCNNNNNNNGG	4 cut(s)	639, 1348, 1546, 1863
BsmAI	GTCTC	2 cut(s)	537, 911
BsmFI	GGGAC	2 cut(s)	1177, 1861
BsmI	GAATGC	1 cut(s)	1057
BsnI	GGCC	5 cut(s)	574, 1721, 1828, 1912, 1970
Bso31I	GGTCTC	1 cut(s)	911
BsoBI	CYCGRG	1 cut(s)	1839
Bsp119I	TTCGAA	2 cut(s)	466, 2048
Bsp1286I	GDGCHC	3 cut(s)	456, 1847, 1993
Bsp143I	GATC	7 cut(s)	13, 286, 477, 766, 1004, 1258, 1767
Bsp1720I	GCTNAGC	1 cut(s)	450
BspACI	CCGC	1 cut(s)	1722
BspANI	GGCC	5 cut(s)	574, 1721, 1828, 1912, 1970
BspCNI	CTCAG	7 cut(s)	283, 361, 442, 466, 715, 907, 1978
BspFNI	CGCG	2 cut(s)	541, 1204
BspLI	GGNNCC	8 cut(s)	288, 606, 801, 1353, 1750, 1769, 1877, 1936
BspMAI	CTGCAG	2 cut(s)	553, 1489
BspMI	ACCTGC	2 cut(s)	556, 1489
BspPI	GGATC	5 cut(s)	21, 281, 294, 1762, 1775
BspT104I	TTCGAA	2 cut(s)	466, 2048
BspT107I	GGYRCC	2 cut(s)	799, 1934
BspTI	CTTAAG	1 cut(s)	95
BspTNI	GGTCTC	1 cut(s)	911
BsrFI	RCCGGY	1 cut(s)	408
BsrI	ACTGG	7 cut(s)	608, 921, 1078, 1165, 1530, 1678, 1994
BssAI	RCCGGY	1 cut(s)	408
BssECI	CCNNGG	5 cut(s)	795, 957, 1829, 1839, 1840
BssMI	GATC	7 cut(s)	13, 286, 477, 766, 1004, 1258, 1767
BssNI	GRCGYC	1 cut(s)	1537
BssT1I	CCWWGG	1 cut(s)	1829
Bst2UI	CCWGG	6 cut(s)	796, 1249, 1864, 1932, 1939, 1977
Bst4CI	ACNGT	6 cut(s)	218, 748, 820, 1034, 1041, 1265
Bst6I	CTCTTC	1 cut(s)	1516
BstACI	GRCGYC	1 cut(s)	1537
BstAFI	CTTAAG	1 cut(s)	95
BstAPI	GCANNNNNTGC	3 cut(s)	842, 1409, 1730
BstBAI	YACGTR	1 cut(s)	1699
BstBI	TTCGAA	2 cut(s)	466, 2048
BstC8I	GCNNGC	3 cut(s)	410, 1946, 2029
BstDEI	CTNAG	8 cut(s)	291, 369, 450, 474, 702, 915, 1497, 1965
BstEII	GGTNACC	1 cut(s)	329
BstF5I	GGATG	5 cut(s)	217, 448, 938, 967, 1555
BstFNI	CGCG	2 cut(s)	541, 1204
BstHHI	GCGC	1 cut(s)	1204
BstKTI	GATC	7 cut(s)	16, 289, 480, 769, 1007, 1261, 1770
BstMAI	GTCTC	2 cut(s)	537, 911
BstMBI	GATC	7 cut(s)	13, 286, 477, 766, 1004, 1258, 1767
BstMCI	CGRYCG	1 cut(s)	1007
BstMWI	GCNNNNNNNGC	5 cut(s)	580, 842, 1409, 1730, 1954
BstNI	CCWGG	6 cut(s)	796, 1249, 1864, 1932, 1939, 1977
BstNSI	RCATGY	3 cut(s)	1430, 1897, 1948
BstPI	GGTNACC	1 cut(s)	329
BstSCI	CCNGG	9 cut(s)	794, 1247, 1813, 1838, 1839, 1862, 1930, 1937, 1975
BstSFI	CTRYAG	3 cut(s)	549, 1388, 1485
BstSLI	GKGCMC	1 cut(s)	1847
BstSNI	TACGTA	1 cut(s)	1699
BstUI	CGCG	2 cut(s)	541, 1204
BstV2I	GAAGAC	1 cut(s)	713
BstX2I	RGATCY	2 cut(s)	286, 1767
BstYI	RGATCY	2 cut(s)	286, 1767
Bsu36I	CCTNAGG	1 cut(s)	291
BsuRI	GGCC	5 cut(s)	574, 1721, 1828, 1912, 1970
BtrI	CACGTC	1 cut(s)	1824
BtsCI	GGATG	5 cut(s)	217, 448, 938, 967, 1555
BtsI	GCAGTG	4 cut(s)	1857, 1955, 1998, 2004
BveI	ACCTGC	2 cut(s)	556, 1489
Cac8I	GCNNGC	3 cut(s)	410, 1946, 2029
CaiI	CAGNNNCTG	4 cut(s)	614, 842, 1673, 2000
CfoI	GCGC	1 cut(s)	1204
Cfr10I	RCCGGY	1 cut(s)	408
Cfr13I	GGNCC	2 cut(s)	30, 1875
Cfr9I	CCCGGG	1 cut(s)	1839
CseI	GACGC	3 cut(s)	530, 707, 1545
CsiI	ACCWGGT	1 cut(s)	1930
CviAII	CATG	8 cut(s)	106, 491, 811, 1427, 1759, 1819, 1894, 1945
DdeI	CTNAG	8 cut(s)	291, 369, 450, 474, 702, 915, 1497, 1965
DpnI	GATC	7 cut(s)	15, 288, 479, 768, 1006, 1260, 1769
DpnII	GATC	7 cut(s)	13, 286, 477, 766, 1004, 1258, 1767
EaeI	YGGCCR	1 cut(s)	1826
Eam1104I	CTCTTC	1 cut(s)	1516
EarI	CTCTTC	1 cut(s)	1516
Eco105I	TACGTA	1 cut(s)	1699
Eco130I	CCWWGG	1 cut(s)	1829
Eco147I	AGGCCT	1 cut(s)	1912
Eco24I	GRGCYC	1 cut(s)	456
Eco31I	GGTCTC	1 cut(s)	911
Eco47I	GGWCC	2 cut(s)	30, 1875
Eco57I	CTGAAG	2 cut(s)	636, 867
Eco81I	CCTNAGG	1 cut(s)	291
Eco88I	CYCGRG	1 cut(s)	1839
Eco91I	GGTNACC	1 cut(s)	329
EcoO109I	RGGNCCY	1 cut(s)	30
EcoO65I	GGTNACC	1 cut(s)	329
EcoRI	GAATTC	1 cut(s)	1285
EcoRII	CCWGG	6 cut(s)	794, 1247, 1862, 1930, 1937, 1975
EcoT14I	CCWWGG	1 cut(s)	1829
EcoT22I	ATGCAT	2 cut(s)	670, 1735
EcoT38I	GRGCYC	1 cut(s)	456
ErhI	CCWWGG	1 cut(s)	1829
FaeI	CATG	8 cut(s)	109, 494, 814, 1430, 1762, 1822, 1897, 1948
FalI	AAGNNNNNCTT	2 cut(s)	1593, 1625
FaqI	GGGAC	2 cut(s)	1177, 1861
FatI	CATG	8 cut(s)	105, 490, 810, 1426, 1758, 1818, 1893, 1944
FokI	GGATG	5 cut(s)	224, 455, 925, 974, 1562
FriOI	GRGCYC	1 cut(s)	456
FspBI	CTAG	3 cut(s)	417, 893, 1020
GlaI	GCGC	1 cut(s)	1203
GsuI	CTGGAG	1 cut(s)	1977
HaeIII	GGCC	5 cut(s)	574, 1721, 1828, 1912, 1970
HapII	CCGG	4 cut(s)	409, 1016, 1814, 1840
HgaI	GACGC	3 cut(s)	530, 707, 1545
HhaI	GCGC	1 cut(s)	1204
Hin1I	GRCGYC	1 cut(s)	1537
Hin1II	CATG	8 cut(s)	109, 494, 814, 1430, 1762, 1822, 1897, 1948
Hin6I	GCGC	1 cut(s)	1202
HinP1I	GCGC	1 cut(s)	1202
HincII	GTYRAC	5 cut(s)	399, 545, 751, 816, 1576
HindII	GTYRAC	5 cut(s)	399, 545, 751, 816, 1576
HindIII	AAGCTT	1 cut(s)	92
HinfI	GANTC	7 cut(s)	18, 56, 221, 568, 752, 781, 1490
HpaI	GTTAAC	1 cut(s)	1576
HpaII	CCGG	4 cut(s)	409, 1016, 1814, 1840
HphI	GGTGA	4 cut(s)	341, 1382, 1991, 2010
Hpy166II	GTNNAC	9 cut(s)	399, 545, 751, 816, 1037, 1535, 1576, 1585, 1707
Hpy188I	TCNGA	9 cut(s)	265, 283, 370, 475, 482, 616, 916, 1087, 1099
Hpy188III	TCNNGA	7 cut(s)	290, 942, 1349, 1614, 1742, 1802, 1885
Hpy8I	GTNNAC	9 cut(s)	399, 545, 751, 816, 1037, 1535, 1576, 1585, 1707
Hpy99I	CGWCG	3 cut(s)	125, 642, 780
HpyAV	CCTTC	6 cut(s)	161, 546, 879, 1100, 1429, 2025
HpyCH4III	ACNGT	6 cut(s)	218, 748, 820, 1034, 1041, 1265
HpyCH4IV	ACGT	5 cut(s)	141, 198, 710, 1698, 1823
HpyF10VI	GCNNNNNNNGC	5 cut(s)	580, 842, 1409, 1730, 1954
HpyF3I	CTNAG	8 cut(s)	291, 369, 450, 474, 702, 915, 1497, 1965
HpySE526I	ACGT	5 cut(s)	141, 198, 710, 1698, 1823
Hsp92I	GRCGYC	1 cut(s)	1537
Hsp92II	CATG	8 cut(s)	109, 494, 814, 1430, 1762, 1822, 1897, 1948
HspAI	GCGC	1 cut(s)	1202
KroI	GCCGGC	1 cut(s)	408
KroNI	GCCGGC	1 cut(s)	410
KspAI	GTTAAC	1 cut(s)	1576
Kzo9I	GATC	7 cut(s)	13, 286, 477, 766, 1004, 1258, 1767
LmnI	GCTCC	7 cut(s)	6, 1351, 1457, 1790, 1816, 1941, 1996
LweI	GCATC	9 cut(s)	280, 433, 514, 619, 655, 937, 1491, 1540, 1654
MabI	ACCWGGT	1 cut(s)	1930
MaeI	CTAG	3 cut(s)	417, 893, 1020
MaeII	ACGT	5 cut(s)	141, 198, 710, 1698, 1823
MaeIII	GTNAC	8 cut(s)	329, 619, 853, 1141, 1205, 1474, 1657, 1996
MalI	GATC	7 cut(s)	15, 288, 479, 768, 1006, 1260, 1769
MboI	GATC	7 cut(s)	13, 286, 477, 766, 1004, 1258, 1767
MboII	GAAGA	9 cut(s)	188, 311, 509, 713, 860, 986, 1231, 1281, 1503
MflI	RGATCY	2 cut(s)	286, 1767
MhlI	GDGCHC	3 cut(s)	456, 1847, 1993
MlsI	TGGCCA	1 cut(s)	1828
MluCI	AATT	7 cut(s)	43, 259, 650, 691, 968, 1189, 1285
MluNI	TGGCCA	1 cut(s)	1828
MlyI	GAGTC	2 cut(s)	27, 746
MmeI	TCCRAC	2 cut(s)	1009, 1435
Mox20I	TGGCCA	1 cut(s)	1828
Mph1103I	ATGCAT	2 cut(s)	670, 1735
MroNI	GCCGGC	1 cut(s)	408
MscI	TGGCCA	1 cut(s)	1828
MseI	TTAA	8 cut(s)	42, 96, 671, 864, 990, 1122, 1575, 2037
MslI	CAYNNNNRTG	1 cut(s)	131
Msp20I	TGGCCA	1 cut(s)	1828
MspA1I	CMGCKG	2 cut(s)	449, 1280
MspCI	CTTAAG	1 cut(s)	95
MspI	CCGG	4 cut(s)	409, 1016, 1814, 1840
MspR9I	CCNGG	9 cut(s)	796, 1249, 1815, 1840, 1841, 1864, 1932, 1939, 1977
Mva1269I	GAATGC	1 cut(s)	1057
MvaI	CCWGG	6 cut(s)	796, 1249, 1864, 1932, 1939, 1977
MvnI	CGCG	2 cut(s)	541, 1204
MwoI	GCNNNNNNNGC	5 cut(s)	580, 842, 1409, 1730, 1954
NaeI	GCCGGC	1 cut(s)	410
NciI	CCSGG	3 cut(s)	1815, 1840, 1841
NdeII	GATC	7 cut(s)	13, 286, 477, 766, 1004, 1258, 1767
NgoMIV	GCCGGC	1 cut(s)	408
NlaIII	CATG	8 cut(s)	109, 494, 814, 1430, 1762, 1822, 1897, 1948
NlaIV	GGNNCC	8 cut(s)	288, 606, 801, 1353, 1750, 1769, 1877, 1936
NmuCI	GTSAC	3 cut(s)	329, 619, 1996
NsiI	ATGCAT	2 cut(s)	670, 1735
NspI	RCATGY	3 cut(s)	1430, 1897, 1948
NspV	TTCGAA	2 cut(s)	466, 2048
OliI	CACNNNNGTG	1 cut(s)	131
PaeI	GCATGC	1 cut(s)	1948
PaqCI	CACCTGC	1 cut(s)	1489
PceI	AGGCCT	1 cut(s)	1912
PctI	GAATGC	1 cut(s)	1057
PdiI	GCCGGC	1 cut(s)	410
PfeI	GAWTC	5 cut(s)	56, 221, 568, 781, 1490
PflFI	GACNNNGTC	1 cut(s)	894
PfoI	TCCNGGA	1 cut(s)	1247
Ple19I	CGATCG	1 cut(s)	1007
PleI	GAGTC	2 cut(s)	26, 746
PpsI	GAGTC	2 cut(s)	26, 746
Ppu21I	YACGTR	1 cut(s)	1699
PpuMI	RGGWCCY	1 cut(s)	30
Psp5II	RGGWCCY	1 cut(s)	30
Psp6I	CCWGG	6 cut(s)	794, 1247, 1862, 1930, 1937, 1975
PspEI	GGTNACC	1 cut(s)	329
PspGI	CCWGG	6 cut(s)	794, 1247, 1862, 1930, 1937, 1975
PspN4I	GGNNCC	8 cut(s)	288, 606, 801, 1353, 1750, 1769, 1877, 1936
PspPI	GGNCC	2 cut(s)	30, 1875
PspPPI	RGGWCCY	1 cut(s)	30
PstI	CTGCAG	2 cut(s)	553, 1489
PstNI	CAGNNNCTG	4 cut(s)	614, 842, 1673, 2000
PsuI	RGATCY	2 cut(s)	286, 1767
PsyI	GACNNNGTC	1 cut(s)	894
PvuI	CGATCG	1 cut(s)	1007
PvuII	CAGCTG	2 cut(s)	449, 1280
RseI	CAYNNNNRTG	1 cut(s)	131
SaqAI	TTAA	8 cut(s)	42, 96, 671, 864, 990, 1122, 1575, 2037
Sau3AI	GATC	7 cut(s)	13, 286, 477, 766, 1004, 1258, 1767
Sau96I	GGNCC	2 cut(s)	30, 1875
SchI	GAGTC	2 cut(s)	27, 746
ScrFI	CCNGG	9 cut(s)	796, 1249, 1815, 1840, 1841, 1864, 1932, 1939, 1977
SduI	GDGCHC	3 cut(s)	456, 1847, 1993
SexAI	ACCWGGT	1 cut(s)	1930
SfaNI	GCATC	9 cut(s)	280, 433, 514, 619, 655, 937, 1491, 1540, 1654
SfcI	CTRYAG	3 cut(s)	549, 1388, 1485
SfuI	TTCGAA	2 cut(s)	466, 2048
SinI	GGWCC	2 cut(s)	30, 1875
SmaI	CCCGGG	1 cut(s)	1841
SmiMI	CAYNNNNRTG	1 cut(s)	131
SmlI	CTYRAG	3 cut(s)	95, 679, 1772
SmoI	CTYRAG	3 cut(s)	95, 679, 1772
SnaBI	TACGTA	1 cut(s)	1699
SphI	GCATGC	1 cut(s)	1948
Sse9I	AATT	7 cut(s)	43, 259, 650, 691, 968, 1189, 1285
SseBI	AGGCCT	1 cut(s)	1912
SsiI	CCGC	1 cut(s)	1722
SspMI	CTAG	3 cut(s)	417, 893, 1020
StuI	AGGCCT	1 cut(s)	1912
StyD4I	CCNGG	9 cut(s)	794, 1247, 1813, 1838, 1839, 1862, 1930, 1937, 1975
StyI	CCWWGG	1 cut(s)	1829
TaaI	ACNGT	6 cut(s)	218, 748, 820, 1034, 1041, 1265
TaiI	ACGT	5 cut(s)	144, 201, 713, 1701, 1826
TaqI	TCGA	8 cut(s)	16, 21, 466, 637, 775, 1561, 1615, 2048
TaqII	GACCGA	1 cut(s)	903
TasI	AATT	7 cut(s)	43, 259, 650, 691, 968, 1189, 1285
TauI	GCSGC	1 cut(s)	1724
TfiI	GAWTC	5 cut(s)	56, 221, 568, 781, 1490
Tru1I	TTAA	8 cut(s)	42, 96, 671, 864, 990, 1122, 1575, 2037
Tru9I	TTAA	8 cut(s)	42, 96, 671, 864, 990, 1122, 1575, 2037
TseFI	GTSAC	3 cut(s)	329, 619, 1996
Tsp45I	GTSAC	3 cut(s)	329, 619, 1996
TspDTI	ATGAA	7 cut(s)	94, 479, 839, 1008, 1119, 1448, 1747
TspGWI	ACGGA	3 cut(s)	793, 1726, 1761
TspMI	CCCGGG	1 cut(s)	1839
Tth111I	GACNNNGTC	1 cut(s)	894
Vha464I	CTTAAG	1 cut(s)	95
VpaK11BI	GGWCC	2 cut(s)	30, 1875
XapI	RAATTY	4 cut(s)	259, 968, 1189, 1285
XceI	RCATGY	3 cut(s)	1430, 1897, 1948
XmaI	CCCGGG	1 cut(s)	1839
XspI	CTAG	3 cut(s)	417, 893, 1020
Zsp2I	ATGCAT	2 cut(s)	670, 1735

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.