Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0006139

Physical Location & Seq

Genomic Coordinates Forward (+)

570701 .. 575734

Gene Structure 5034 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g00640.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGGGGGATTACACCGACGACACTCTTGTGGAATATGTTATTGTCCTTTTAAGGAATGGCAGGGGCAAAGAAGAAGCAAAGAATGAGTTGAACGTGTTTTTGGGGGATGACAGTGATTCTTTTGTTTCTTGGTTATGGGATCATCTGGCTTCAAATTCGGATTTGCATCTACAATCACAAGATTCTGAGATTGAGGATGTGAGTAAAAGAAAAACGACATCAGGTGACTTAATTGGAAAAAGTGATTCTTATCATTTGAGTTCTGAGCCAGAAAGAGAGAAGTCTAATAATAAGGTAACTAGAAGCCGTCACAATAGGGAATGGAAAGGATTAGCAAGGGATGAAGGCGAACCCCCTCCTTTTCGAAGCTCTGAGATTGGAGATATTCATGTAGAAGATAAAAGTCATAGCAAAGTCAGTCGTGCAAAGTCTCCTTCACGTCAATCTGCAGCTCAAAGGAAAAGGATTCGGTCCGATGAGCGACATAATACAGAGAGGGAGCCAGTTTCTCAAGTGAAAGTTGATGCCCCTCGACGGCTACTCCAGTTTGCCATGCGTGATGCACTGACAACCTCAAGGCAATCCAATTCAGCAACGCAGCCCACATTGAAGCGTCTTCGTTCTGTGGTATCTACACCCACTGTTGACTCATCATTGGTTGATCGTCCTCGACGGATTCAGTCTGTGGCCAGGGTGCCAAATCCCATGTCAACTGTGATGAAAGCTGTTGCAGAAGCTGCTGAGGATGTAACAAGAGTCAAACCTTCAGGAAGTGTGTTTGACCGACTTGGTCGTGGTATGGAGTTTTCTGAGACCAGTGTGCCTCTTGCATCATTTAGAGATGCTGCTACCGGGGATGTTGAATTTGAAGACGACGTCCAACTTCTTGAGCAAACACAATCGTCGTATCCGGCTAGAAGTGAATATAGTGGACAGTATGAAGGGAATGCTATGCTAGAAAGTGAAACTGGTTTGGCTTCCGATTTTATATCGGACAAGGAAGGGTTTGATGATGTTAATGTTATGGGTCGTAGTGTTACTGATGTTTCTCAAACTGGGACATTCGGTGGAAGCAAGGGTGAAAATTCACTGACGTCGCGGTACAATGTGGCGAAGAATGTTGATGATGTTATGCGGCTATCCAGGAATACAGATCATGGCCAACCTATTGCAGCTGCGAATTCTTCGCATAAGATTATGAACATATCTGTGAAAGTCAATACGTGGAAACCACCCCATTATCAGGAGCCAAGAGAAGTTGCTGATGATGATTGGAAATCCTTACAGGATAGTGTGGCAGGGGTTTCCAAATCTGGTTTGCATGTGATGAATGAGAATGGCAATCCTGTCGGAGCAAGTAATGGAAATGCAATACCTGCTGCAGATTCTCAGAAGATGCTTTCCTCTTCTAGTGGTCTATATGCCAGTGGGGGGCGCCCTTTGGAGGATGCAGATTCTCGAACAATCTTTGTTAACAATGTCCATTTTGCTGCTACAAAAGATAGTCTTTCTCGACATTTCAACAAGTTTGGGGAAGTGCTAAAAGTAGTGATAGTCACTGATTCAGCAACTGGGCAACCTAAAGGGTCGGCTTATGTAGAGTTCACACGGAAGGAAGCGGCAGACAATGCATTATCTCTGGATGGAACCTCATTCATGTCACGGATCCTTAAGGTTGAAAAGAGGGGAGCTGCACATCAAGAAGCTGCTCCTGGCATGATGTGGCCAAGGGTTGCCCGGGGCTCTCCATTTGCCACTGCCAGGTTTGGTAGGTCCCCTTTCCCGAGAGGCATGTCTGGTGCGTATAGGCCTCGTCCCCTAATCAAACCTGGTGCCAGGAGCTTGCAGTGGAAGCGTGATACTCTGGCCACTCCAGGTGAGACGGGTTCTCCAGTCACTGCTAGTGCTGTTCCTTCCCCAACAGCTCGCAGTTTAACCTATGTTCGAACAGAACCTAAGCCAGAGGGGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0002237 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010033 GO:0016234 GO:0016310 GO:0019538 GO:0019899 GO:0023014 GO:0023052 GO:0032496 GO:0032991 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0042405 GO:0043085 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051338 GO:0051347 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0065009 GO:0070063 GO:0070887 GO:0071216 GO:0071219 GO:0071222 GO:0071310 GO:0071396 GO:0071704 GO:1901564 GO:1901700 GO:1901701 GO:1904245 GO:1904247 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PWI RRM_1

Protein Analysis

658

Amino Acids

71.99

Weight (kDa)

7.28

Isoelectric Point (pI)

52.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006139)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12640 AT3G12640 AT3G12640 AT3G12640
fragaria_vesca	FvH4_7g00830 FvH4_7g00830 FvH4_7g00830
malus_domestica	MD02G1314400.v1.1 MD07G1007800.v1.1
prunus_persica	Prupe.2G010500_v2.0.a1
pyrus_communis	pycom02g26360 pycom07g00640
rosa_chinensis	RchiOBHm_Chr1g0314991
rosa_laevigata	RLG00000030749
rosa_multiflora	Rmu_co8101366.1_g000001 Rmu_co8205378.1_g000001 Rmu_sc0004180.1_g000037 Rmu_sc0017414.1_g000001 Rmu_sc0023178.1_g000001 Rmu_sc0036535.1_g000001
rosa_roxburghii	Rroxscaffold_4G00331600
rosa_rugosa	Rorug01G0004200
rosa_samantha	Rh1AG014700 Rh1BG007100 Rh1CG013000 Rh1DG008500
rosa_wichuraiana	Rw1G000730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	879, 1097
Acc36I	ACCTGC	1 cut(s)	1384
AccB1I	GGYRCC	3 cut(s)	694, 1434, 1832
AccII	CGCG	1 cut(s)	1099
AciI	CCGC	3 cut(s)	1099, 1135, 1619
AclWI	GGATC	3 cut(s)	147, 1660, 1673
AcoI	YGGCCR	4 cut(s)	687, 1159, 1724, 1866
AcsI	RAATTY	4 cut(s)	154, 863, 1084, 1180
AcuI	CTGAAG	1 cut(s)	750
AcyI	GRCGYC	3 cut(s)	876, 1094, 1435
AfaI	GTAC	1 cut(s)	1103
AfiI	CCNNNNNNNGG	5 cut(s)	534, 1243, 1431, 1444, 1761
AflII	CTTAAG	1 cut(s)	1670
AflIII	ACRYGT	1 cut(s)	93
AgsI	TTSAA	7 cut(s)	91, 153, 610, 863, 869, 1522, 1679
AjiI	CACGTC	1 cut(s)	440
AjnI	CCWGG	7 cut(s)	689, 1142, 1711, 1760, 1828, 1835, 1873
AjuI	GAANNNNNNNTTGG	2 cut(s)	83, 115
AleI	CACNNNNGTG	1 cut(s)	26
AluBI	AGCT	9 cut(s)	369, 452, 725, 737, 1175, 1691, 1706, 1842, 1925
AluI	AGCT	9 cut(s)	369, 452, 725, 737, 1175, 1691, 1706, 1842, 1925
Alw26I	GTCTC	3 cut(s)	435, 806, 1874
AlwI	GGATC	3 cut(s)	147, 1660, 1673
AlwNI	CAGNNNCTG	3 cut(s)	737, 1571, 1898
Ama87I	CYCGRG	2 cut(s)	1737, 1783
AoxI	GGCC	5 cut(s)	687, 1159, 1724, 1808, 1866
ApoI	RAATTY	4 cut(s)	154, 863, 1084, 1180
ArsI	GACNNNNNNTTYG	2 cut(s)	692, 724
AspLEI	GCGC	1 cut(s)	1437
AspS9I	GGNCC	2 cut(s)	471, 1773
AsuC2I	CCSGG	3 cut(s)	853, 1738, 1739
AsuHPI	GGTGA	3 cut(s)	236, 1091, 1889
AsuII	TTCGAA	2 cut(s)	364, 1945
AvaI	CYCGRG	2 cut(s)	1737, 1783
AvaII	GGWCC	2 cut(s)	471, 1773
BalI	TGGCCA	4 cut(s)	689, 1161, 1726, 1868
BamHI	GGATCC	1 cut(s)	1665
BanI	GGYRCC	3 cut(s)	694, 1434, 1832
BanII	GRGCYC	1 cut(s)	1745
BbsI	GAAGAC	2 cut(s)	608, 876
BbvCI	CCTCAGC	1 cut(s)	741
BccI	CCATC	1 cut(s)	1637
BceAI	ACGGC	2 cut(s)	291, 551
BcgI	CGANNNNNNTGC	2 cut(s)	1330, 1364
BciT130I	CCWGG	7 cut(s)	691, 1144, 1713, 1762, 1830, 1837, 1875
BciVI	GTATCC	1 cut(s)	918
BcnI	CCSGG	3 cut(s)	853, 1738, 1739
BcoDI	GTCTC	3 cut(s)	435, 806, 1874
BfaI	CTAG	6 cut(s)	300, 915, 956, 1410, 1902, 1972
BfmI	CTRYAG	2 cut(s)	447, 1380
BfoI	RGCGCY	1 cut(s)	1438
BfrI	CTTAAG	1 cut(s)	1670
BfuAI	ACCTGC	1 cut(s)	1384
BfuI	GTATCC	1 cut(s)	918
Bme18I	GGWCC	2 cut(s)	471, 1773
BmeT110I	CYCGRG	2 cut(s)	1737, 1783
BmgBI	CACGTC	1 cut(s)	440
BmgT120I	GGNCC	2 cut(s)	471, 1773
BmiI	GGNNCC	8 cut(s)	501, 696, 1248, 1436, 1648, 1667, 1775, 1834
BmrI	ACTGGG	2 cut(s)	1065, 1581
BmsI	GCATC	7 cut(s)	175, 514, 550, 832, 839, 1386, 1438
BmuI	ACTGGG	2 cut(s)	1065, 1581
BpiI	GAAGAC	2 cut(s)	608, 876
BpmI	CTGGAG	3 cut(s)	527, 1857, 1875
Bpu10I	CCTNAGC	2 cut(s)	741, 1956
Bpu14I	TTCGAA	2 cut(s)	364, 1945
BpuEI	CTTGAG	3 cut(s)	495, 559, 908
BpuMI	CCSGG	3 cut(s)	853, 1738, 1739
BsaAI	YACGTR	1 cut(s)	1224
BsaBI	GATNNNNATC	2 cut(s)	165, 249
BsaHI	GRCGYC	3 cut(s)	876, 1094, 1435
BsaI	GGTCTC	1 cut(s)	806
BsaJI	CCNNGG	5 cut(s)	690, 852, 1727, 1737, 1738
BsaXI	ACNNNNNCTCC	4 cut(s)	525, 555, 1873, 1903
Bsc4I	CCNNNNNNNGG	5 cut(s)	534, 1243, 1431, 1444, 1761
Bse1I	ACTGG	8 cut(s)	503, 544, 816, 973, 1060, 1425, 1576, 1892
Bse8I	GATNNNNATC	2 cut(s)	165, 249
BseBI	CCWGG	7 cut(s)	691, 1144, 1713, 1762, 1830, 1837, 1875
BseDI	CCNNGG	5 cut(s)	690, 852, 1727, 1737, 1738
BseGI	GGATG	7 cut(s)	112, 202, 346, 751, 862, 1453, 1648
BseJI	GATNNNNATC	2 cut(s)	165, 249
BseLI	CCNNNNNNNGG	5 cut(s)	534, 1243, 1431, 1444, 1761
BseMII	CTCAG	6 cut(s)	177, 255, 363, 732, 801, 1403
BseNI	ACTGG	8 cut(s)	503, 544, 816, 973, 1060, 1425, 1576, 1892
BsgI	GTGCAG	1 cut(s)	1677
Bsh1236I	CGCG	1 cut(s)	1099
BshFI	GGCC	5 cut(s)	689, 1161, 1726, 1810, 1868
BshNI	GGYRCC	3 cut(s)	694, 1434, 1832
BsiHKCI	CYCGRG	2 cut(s)	1737, 1783
BsiSI	CCGG	3 cut(s)	852, 911, 1738
BslFI	GGGAC	3 cut(s)	1072, 1759, 1800
BslI	CCNNNNNNNGG	5 cut(s)	534, 1243, 1431, 1444, 1761
BsmAI	GTCTC	3 cut(s)	435, 806, 1874
BsmBI	CGTCTC	1 cut(s)	1874
BsmFI	GGGAC	3 cut(s)	1072, 1759, 1800
BsmI	GAATGC	1 cut(s)	952
BsnI	GGCC	5 cut(s)	689, 1161, 1726, 1810, 1868
Bso31I	GGTCTC	1 cut(s)	806
BsoBI	CYCGRG	2 cut(s)	1737, 1783
Bsp119I	TTCGAA	2 cut(s)	364, 1945
Bsp1286I	GDGCHC	1 cut(s)	1745
Bsp143I	GATC	4 cut(s)	139, 661, 1153, 1665
BspACI	CCGC	3 cut(s)	1099, 1135, 1619
BspANI	GGCC	5 cut(s)	689, 1161, 1726, 1810, 1868
BspCNI	CTCAG	6 cut(s)	178, 256, 364, 733, 802, 1402
BspFNI	CGCG	1 cut(s)	1099
BspLI	GGNNCC	8 cut(s)	501, 696, 1248, 1436, 1648, 1667, 1775, 1834
BspMAI	CTGCAG	2 cut(s)	451, 1384
BspMI	ACCTGC	1 cut(s)	1384
BspPI	GGATC	3 cut(s)	147, 1660, 1673
BspT104I	TTCGAA	2 cut(s)	364, 1945
BspT107I	GGYRCC	3 cut(s)	694, 1434, 1832
BspTI	CTTAAG	1 cut(s)	1670
BspTNI	GGTCTC	1 cut(s)	806
BsrI	ACTGG	8 cut(s)	503, 544, 816, 973, 1060, 1425, 1576, 1892
BssECI	CCNNGG	5 cut(s)	690, 852, 1727, 1737, 1738
BssMI	GATC	4 cut(s)	139, 661, 1153, 1665
BssNI	GRCGYC	3 cut(s)	876, 1094, 1435
BssT1I	CCWWGG	1 cut(s)	1727
Bst2UI	CCWGG	7 cut(s)	691, 1144, 1713, 1762, 1830, 1837, 1875
Bst4CI	ACNGT	4 cut(s)	113, 643, 715, 936
Bst6I	CTCTTC	1 cut(s)	1411
BstACI	GRCGYC	3 cut(s)	876, 1094, 1435
BstAFI	CTTAAG	1 cut(s)	1670
BstAPI	GCANNNNNTGC	3 cut(s)	737, 1376, 1628
BstBAI	YACGTR	1 cut(s)	1224
BstBI	TTCGAA	2 cut(s)	364, 1945
BstC8I	GCNNGC	2 cut(s)	1844, 1927
BstDEI	CTNAG	7 cut(s)	186, 264, 372, 741, 810, 1389, 1956
BstF5I	GGATG	7 cut(s)	112, 202, 346, 751, 862, 1453, 1648
BstFNI	CGCG	1 cut(s)	1099
BstH2I	RGCGCY	1 cut(s)	1438
BstHHI	GCGC	1 cut(s)	1437
BstKTI	GATC	4 cut(s)	142, 664, 1156, 1668
BstMAI	GTCTC	3 cut(s)	435, 806, 1874
BstMBI	GATC	4 cut(s)	139, 661, 1153, 1665
BstMWI	GCNNNNNNNGC	4 cut(s)	737, 1376, 1628, 1852
BstNI	CCWGG	7 cut(s)	691, 1144, 1713, 1762, 1830, 1837, 1875
BstNSI	RCATGY	2 cut(s)	1325, 1795
BstSFI	CTRYAG	2 cut(s)	447, 1380
BstUI	CGCG	1 cut(s)	1099
BstV2I	GAAGAC	2 cut(s)	608, 876
BstX2I	RGATCY	1 cut(s)	1665
BstYI	RGATCY	1 cut(s)	1665
BsuI	GTATCC	1 cut(s)	918
BsuRI	GGCC	5 cut(s)	689, 1161, 1726, 1810, 1868
BtrI	CACGTC	1 cut(s)	440
BtsCI	GGATG	7 cut(s)	112, 202, 346, 751, 862, 1453, 1648
BtsI	GCAGTG	3 cut(s)	1755, 1853, 1896
BveI	ACCTGC	1 cut(s)	1384
Cac8I	GCNNGC	2 cut(s)	1844, 1927
CaiI	CAGNNNCTG	3 cut(s)	737, 1571, 1898
CfoI	GCGC	1 cut(s)	1437
Cfr13I	GGNCC	2 cut(s)	471, 1773
Cfr9I	CCCGGG	1 cut(s)	1737
CpoI	CGGWCCG	1 cut(s)	471
CseI	GACGC	1 cut(s)	602
CsiI	ACCWGGT	1 cut(s)	1828
Csp6I	GTAC	1 cut(s)	1102
CspI	CGGWCCG	1 cut(s)	471
CviAII	CATG	8 cut(s)	389, 553, 706, 1157, 1322, 1657, 1717, 1792
CviQI	GTAC	1 cut(s)	1102
DdeI	CTNAG	7 cut(s)	186, 264, 372, 741, 810, 1389, 1956
DinI	GGCGCC	1 cut(s)	1436
DpnI	GATC	4 cut(s)	141, 663, 1155, 1667
DpnII	GATC	4 cut(s)	139, 661, 1153, 1665
EaeI	YGGCCR	4 cut(s)	687, 1159, 1724, 1866
Eam1104I	CTCTTC	1 cut(s)	1411
EarI	CTCTTC	1 cut(s)	1411
Eco130I	CCWWGG	1 cut(s)	1727
Eco147I	AGGCCT	1 cut(s)	1810
Eco24I	GRGCYC	1 cut(s)	1745
Eco31I	GGTCTC	1 cut(s)	806
Eco47I	GGWCC	2 cut(s)	471, 1773
Eco57I	CTGAAG	1 cut(s)	750
Eco88I	CYCGRG	2 cut(s)	1737, 1783
EcoO109I	RGGNCCY	1 cut(s)	1773
EcoRI	GAATTC	1 cut(s)	1180
EcoRII	CCWGG	7 cut(s)	689, 1142, 1711, 1760, 1828, 1835, 1873
EcoT14I	CCWWGG	1 cut(s)	1727
EcoT22I	ATGCAT	1 cut(s)	1633
EcoT38I	GRGCYC	1 cut(s)	1745
EgeI	GGCGCC	1 cut(s)	1436
EheI	GGCGCC	1 cut(s)	1436
ErhI	CCWWGG	1 cut(s)	1727
Esp3I	CGTCTC	1 cut(s)	1874
FaeI	CATG	8 cut(s)	392, 556, 709, 1160, 1325, 1660, 1720, 1795
FalI	AAGNNNNNCTT	4 cut(s)	232, 264, 1491, 1523
FaqI	GGGAC	3 cut(s)	1072, 1759, 1800
FatI	CATG	8 cut(s)	388, 552, 705, 1156, 1321, 1656, 1716, 1791
FokI	GGATG	7 cut(s)	119, 209, 353, 758, 869, 1460, 1655
FriOI	GRGCYC	1 cut(s)	1745
FspBI	CTAG	6 cut(s)	300, 915, 956, 1410, 1902, 1972
GlaI	GCGC	1 cut(s)	1436
GsuI	CTGGAG	3 cut(s)	527, 1857, 1875
HaeII	RGCGCY	1 cut(s)	1438
HaeIII	GGCC	5 cut(s)	689, 1161, 1726, 1810, 1868
HapII	CCGG	3 cut(s)	852, 911, 1738
HgaI	GACGC	1 cut(s)	602
HhaI	GCGC	1 cut(s)	1437
Hin1I	GRCGYC	3 cut(s)	876, 1094, 1435
Hin1II	CATG	8 cut(s)	392, 556, 709, 1160, 1325, 1660, 1720, 1795
Hin6I	GCGC	1 cut(s)	1435
HinP1I	GCGC	1 cut(s)	1435
HincII	GTYRAC	3 cut(s)	646, 711, 1474
HindII	GTYRAC	3 cut(s)	646, 711, 1474
HpaI	GTTAAC	1 cut(s)	1474
HpaII	CCGG	3 cut(s)	852, 911, 1738
HphI	GGTGA	3 cut(s)	236, 1091, 1889
Hpy166II	GTNNAC	5 cut(s)	646, 711, 932, 1474, 1605
Hpy188III	TCNNGA	8 cut(s)	768, 887, 1244, 1458, 1512, 1640, 1700, 1783
Hpy8I	GTNNAC	5 cut(s)	646, 711, 932, 1474, 1605
Hpy99I	CGWCG	6 cut(s)	20, 537, 675, 878, 907, 1099
HpyAV	CCTTC	7 cut(s)	338, 444, 774, 935, 995, 1606, 1923
HpyCH4III	ACNGT	4 cut(s)	113, 643, 715, 936
HpyCH4IV	ACGT	5 cut(s)	93, 439, 876, 1094, 1223
HpyF10VI	GCNNNNNNNGC	4 cut(s)	737, 1376, 1628, 1852
HpyF3I	CTNAG	7 cut(s)	186, 264, 372, 741, 810, 1389, 1956
HpySE526I	ACGT	5 cut(s)	93, 439, 876, 1094, 1223
Hsp92I	GRCGYC	3 cut(s)	876, 1094, 1435
Hsp92II	CATG	8 cut(s)	392, 556, 709, 1160, 1325, 1660, 1720, 1795
HspAI	GCGC	1 cut(s)	1435
KasI	GGCGCC	1 cut(s)	1434
KspAI	GTTAAC	1 cut(s)	1474
Kzo9I	GATC	4 cut(s)	139, 661, 1153, 1665
LmnI	GCTCC	6 cut(s)	499, 1246, 1352, 1688, 1714, 1839
LweI	GCATC	7 cut(s)	175, 514, 550, 832, 839, 1386, 1438
MabI	ACCWGGT	1 cut(s)	1828
MaeI	CTAG	6 cut(s)	300, 915, 956, 1410, 1902, 1972
MaeII	ACGT	5 cut(s)	93, 439, 876, 1094, 1223
MaeIII	GTNAC	8 cut(s)	224, 295, 308, 748, 1036, 1555, 1659, 1894
MalI	GATC	4 cut(s)	141, 663, 1155, 1667
MboI	GATC	4 cut(s)	139, 661, 1153, 1665
MboII	GAAGA	8 cut(s)	83, 407, 608, 881, 1126, 1176, 1398, 1405
MflI	RGATCY	1 cut(s)	1665
MhlI	GDGCHC	1 cut(s)	1745
MlsI	TGGCCA	4 cut(s)	689, 1161, 1726, 1868
MluCI	AATT	6 cut(s)	154, 231, 586, 863, 1084, 1180
MluNI	TGGCCA	4 cut(s)	689, 1161, 1726, 1868
Mly113I	GGCGCC	1 cut(s)	1435
MlyI	GAGTC	2 cut(s)	641, 765
MmeI	TCCRAC	2 cut(s)	904, 1330
Mox20I	TGGCCA	4 cut(s)	689, 1161, 1726, 1868
Mph1103I	ATGCAT	1 cut(s)	1633
MscI	TGGCCA	4 cut(s)	689, 1161, 1726, 1868
MseI	TTAA	6 cut(s)	50, 230, 1017, 1473, 1671, 1934
MslI	CAYNNNNRTG	2 cut(s)	26, 1208
Msp20I	TGGCCA	4 cut(s)	689, 1161, 1726, 1868
MspA1I	CMGCKG	1 cut(s)	1175
MspCI	CTTAAG	1 cut(s)	1670
MspI	CCGG	3 cut(s)	852, 911, 1738
Mva1269I	GAATGC	1 cut(s)	952
MvaI	CCWGG	7 cut(s)	691, 1144, 1713, 1762, 1830, 1837, 1875
MvnI	CGCG	1 cut(s)	1099
MwoI	GCNNNNNNNGC	4 cut(s)	737, 1376, 1628, 1852
NarI	GGCGCC	1 cut(s)	1435
NciI	CCSGG	3 cut(s)	853, 1738, 1739
NdeII	GATC	4 cut(s)	139, 661, 1153, 1665
NlaIII	CATG	8 cut(s)	392, 556, 709, 1160, 1325, 1660, 1720, 1795
NlaIV	GGNNCC	8 cut(s)	501, 696, 1248, 1436, 1648, 1667, 1775, 1834
NmuCI	GTSAC	5 cut(s)	224, 308, 1555, 1659, 1894
NsiI	ATGCAT	1 cut(s)	1633
NspI	RCATGY	2 cut(s)	1325, 1795
NspV	TTCGAA	2 cut(s)	364, 1945
OliI	CACNNNNGTG	1 cut(s)	26
PceI	AGGCCT	1 cut(s)	1810
PctI	GAATGC	1 cut(s)	952
PfeI	GAWTC	8 cut(s)	116, 182, 245, 466, 676, 1385, 1454, 1562
PflFI	GACNNNGTC	2 cut(s)	789, 875
PfoI	TCCNGGA	1 cut(s)	1142
PleI	GAGTC	2 cut(s)	641, 764
PluTI	GGCGCC	1 cut(s)	1438
PpsI	GAGTC	2 cut(s)	641, 764
Ppu21I	YACGTR	1 cut(s)	1224
PpuMI	RGGWCCY	1 cut(s)	1773
Psp5II	RGGWCCY	1 cut(s)	1773
Psp6I	CCWGG	7 cut(s)	689, 1142, 1711, 1760, 1828, 1835, 1873
PspGI	CCWGG	7 cut(s)	689, 1142, 1711, 1760, 1828, 1835, 1873
PspN4I	GGNNCC	8 cut(s)	501, 696, 1248, 1436, 1648, 1667, 1775, 1834
PspPI	GGNCC	2 cut(s)	471, 1773
PspPPI	RGGWCCY	1 cut(s)	1773
PstI	CTGCAG	2 cut(s)	451, 1384
PstNI	CAGNNNCTG	3 cut(s)	737, 1571, 1898
PsuI	RGATCY	1 cut(s)	1665
PsyI	GACNNNGTC	2 cut(s)	789, 875
PvuII	CAGCTG	1 cut(s)	1175
RsaI	GTAC	1 cut(s)	1103
RsaNI	GTAC	1 cut(s)	1102
RseI	CAYNNNNRTG	2 cut(s)	26, 1208
Rsr2I	CGGWCCG	1 cut(s)	471
RsrII	CGGWCCG	1 cut(s)	471
SaqAI	TTAA	6 cut(s)	50, 230, 1017, 1473, 1671, 1934
Sau3AI	GATC	4 cut(s)	139, 661, 1153, 1665
Sau96I	GGNCC	2 cut(s)	471, 1773
SchI	GAGTC	2 cut(s)	641, 765
SduI	GDGCHC	1 cut(s)	1745
SexAI	ACCWGGT	1 cut(s)	1828
SfaNI	GCATC	7 cut(s)	175, 514, 550, 832, 839, 1386, 1438
SfcI	CTRYAG	2 cut(s)	447, 1380
SfoI	GGCGCC	1 cut(s)	1436
SfuI	TTCGAA	2 cut(s)	364, 1945
SinI	GGWCC	2 cut(s)	471, 1773
SmaI	CCCGGG	1 cut(s)	1739
SmiMI	CAYNNNNRTG	2 cut(s)	26, 1208
SmlI	CTYRAG	4 cut(s)	510, 574, 887, 1670
SmoI	CTYRAG	4 cut(s)	510, 574, 887, 1670
Sse9I	AATT	6 cut(s)	154, 231, 586, 863, 1084, 1180
SseBI	AGGCCT	1 cut(s)	1810
SsiI	CCGC	3 cut(s)	1099, 1135, 1619
SspDI	GGCGCC	1 cut(s)	1434
SspMI	CTAG	6 cut(s)	300, 915, 956, 1410, 1902, 1972
StuI	AGGCCT	1 cut(s)	1810
StyI	CCWWGG	1 cut(s)	1727
TaaI	ACNGT	4 cut(s)	113, 643, 715, 936
TaiI	ACGT	5 cut(s)	96, 442, 879, 1097, 1226
TaqI	TCGA	6 cut(s)	364, 532, 670, 1459, 1513, 1945
TaqII	GACCGA	2 cut(s)	459, 798
TasI	AATT	6 cut(s)	154, 231, 586, 863, 1084, 1180
TauI	GCSGC	2 cut(s)	1138, 1622
TfiI	GAWTC	8 cut(s)	116, 182, 245, 466, 676, 1385, 1454, 1562
Tru1I	TTAA	6 cut(s)	50, 230, 1017, 1473, 1671, 1934
Tru9I	TTAA	6 cut(s)	50, 230, 1017, 1473, 1671, 1934
TseFI	GTSAC	5 cut(s)	224, 308, 1555, 1659, 1894
Tsp45I	GTSAC	5 cut(s)	224, 308, 1555, 1659, 1894
TspDTI	ATGAA	7 cut(s)	357, 377, 734, 954, 1214, 1343, 1645
TspGWI	ACGGA	3 cut(s)	688, 1624, 1678
TspMI	CCCGGG	1 cut(s)	1737
Tth111I	GACNNNGTC	2 cut(s)	789, 875
Vha464I	CTTAAG	1 cut(s)	1670
VpaK11BI	GGWCC	2 cut(s)	471, 1773
XapI	RAATTY	4 cut(s)	154, 863, 1084, 1180
XceI	RCATGY	2 cut(s)	1325, 1795
XmaI	CCCGGG	1 cut(s)	1737
XspI	CTAG	6 cut(s)	300, 915, 956, 1410, 1902, 1972
ZraI	GACGTC	2 cut(s)	877, 1095
Zsp2I	ATGCAT	1 cut(s)	1633

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.