Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0006139

Physical Location & Seq

Genomic Coordinates Forward (+)

710845 .. 717027

Gene Structure 6183 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1007800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGGGGAGCGTGGATCGGGTCGATGATAGGACATTTAGGGTTAATTTGACGGGCGATTCAGTCATCAAGTTGAGAGAGAGTGTGAGAGAGAAGCTTAAGGAGTTCATGGGGGATTACACCGACGACACTCTTGTGGAATATGTTATTGTCCTTTTAAGGAATGGCAGGGGCAAAGAAGAAGCAAAGAATGAGTTGAACGTGTTTTTGGGGGATGACAGTGATTCTTTTGTTTCTTGGTTGTGGGATCATCTGGCTTCAAATTCGGATTTGCATCTACAATCACAAGATTCTGAGATTGAGGATGTGAGTCAAAGAAAAACTACATCAGGTGACTTAATTGGAAAAAGTGATTCTCATCATTTGAGCTCTGAGCCAGAAAGAGAGAAGTCTAACAATAAGGTAACTAGAAGCCGGCACAATAGGGAATGGAAAGGACTAGCGAGGGATGAAGCTGAACCCCCTCCTTTTCGAAGCTCTGAGATTGGAGATATTTATGTAGAAGATAAAAGTCATAGCAAAGTTAGTCGTGCAAATTCTCCTTCACGTCAATCTGCAGTGCACAGGAAAAGGATTCGGTCTGATGAGCAACATAATACAGAGAGGGAACCAGTTTCTCAAGTGAAAGTTGATGCCCCTCGACGGCTACTTCAGTTTGCCATGCGTGATGCACTGACAACCTCAAGGCAATCCAATTCAGCAACGCAGCCCACATTGAAGCGTCTTCGTTCTGTGGTATCTACACCCACTGTTGACTCATCATTGGTTGATCGTCCTCGACGGATTCAGTCAGTGGCCAGGGTGCCAAATCCCATGTCAACTGTGATGAAAGCTGTTGCAGAAGCTGCTGAGGATGTAACAAGAGTCAAACCTTCAGGAAGTGTGTTTGATCGACTTGGTCGTGGTATGGAGTTTTCTGAGACCAGTGTGCCTCTTGCATCATTTAGAGATGCTGCTACTGAGGATGTTGAATTTGAAGACACCGTCCAACTTCATGAGCAAACACAATTGTCGTATCCGGCTAGAAGTGAATATGGTGGACAGTATGTAGGGAATGCTATGTTAGAAAGTGAAACTGGTTTGGCTTCTGATTTTATATCGGACAAGGAAGGGTTTGATGATGTTAATGTTATGGGTCGTAGTGTTACTGATGTTTCTCAAATTGGGACATCTGGTGGAAGCAGGGTTGAAAATTCACTGATGTCGCGGTACAATGTGGCGAAGAATGTTGATGATGTTATGCGGCTATCCAGGAATAAAGATCATGGCCAACCTATTGCAGCTGCGAATTCTTCGCATAAGATTGTGAACATATCTGTCAATGTCAATACGTGGAAGCCACCCCATTCTCAGGAGCCAAGAGAAGTTGTTGATGACGATTGGAAATCCCTACAGGATAGTACGGCAGGGGTTTCCAAATCTGGTTTGCATGTGATGAAGGAGAATGGCAGTCCTGTCGGAGCAAGTAATGGAAATGCAACACCTGCTGCAGATTCTCAGAAGATGCTTTCCTCTTCTACTGGTCTATATGTCAGTGGACGCCCTTTGGAGGATGCAGATTCTCGAACTATCTTTGTTAACAATGTCCATTTTGCTGCTACAAAAGATAGTCTTTCTCGACATTTCAACAAGTTTGGGGAAGTGCTAAAAGTAGTGATAGTTACTGATTCAGCAACTGGGCAACCTAAAGGGTCGGCTTATGTAGAGTTCACACGGAAGGAAGCGGCAGACAATGCTTTATCTCTGGACGGAACCTCTTTCATGTCACGGATCCTCAAGGTTGAAAAGAGGGGAGCTGCACATCAAGAAGCTGCTCCTGGTGTGATGTGGCCAAGGGTTACCCGGGGCTCTCCATTTGCCACTGCCAGGTTTGGTAGGTCCCCTTTCCCGAGAGGCATGTCTGGTGCATACAGGCCTCGTCCCCTAATCAAACCTGGTGCGAGGAGCTTGCAGTGGAAGCGTGATACTCAGGCCACTCAGGGTGAGACGGGTTCTCCAGTCACTGGCAGTGCTGCTCCTTCCCCAACAGCTCGCAGTTTAACCTATGTTCGAACAGAACCTAAGCCAGCGGGGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0002237 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010033 GO:0016234 GO:0016310 GO:0019538 GO:0019899 GO:0023014 GO:0023052 GO:0032496 GO:0032991 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0042405 GO:0043085 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051338 GO:0051347 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0065009 GO:0070063 GO:0070887 GO:0071216 GO:0071219 GO:0071222 GO:0071310 GO:0071396 GO:0071704 GO:1901564 GO:1901700 GO:1901701 GO:1904245 GO:1904247 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PWI RRM_1

Protein Analysis

692

Amino Acids

76.02

Weight (kDa)

7.87

Isoelectric Point (pI)

49.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PWI	PF01480	24 - 88	4.4e-07	PWI domain
RRM_1	PF00076	523 - 591	6.5e-18	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006139)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12640 AT3G12640 AT3G12640 AT3G12640
fragaria_vesca	FvH4_7g00830 FvH4_7g00830 FvH4_7g00830
malus_domestica	MD02G1314400.v1.1 MD07G1007800.v1.1
prunus_persica	Prupe.2G010500_v2.0.a1
pyrus_communis	pycom02g26360 pycom07g00640
rosa_chinensis	RchiOBHm_Chr1g0314991
rosa_laevigata	RLG00000030749
rosa_multiflora	Rmu_co8101366.1_g000001 Rmu_co8205378.1_g000001 Rmu_sc0004180.1_g000037 Rmu_sc0017414.1_g000001 Rmu_sc0023178.1_g000001 Rmu_sc0036535.1_g000001
rosa_roxburghii	Rroxscaffold_4G00331600
rosa_rugosa	Rorug01G0004200
rosa_samantha	Rh1AG014700 Rh1BG007100 Rh1CG013000 Rh1DG008500
rosa_wichuraiana	Rw1G000730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1489
Acc36I	ACCTGC	1 cut(s)	1489
AccB1I	GGYRCC	1 cut(s)	799
AccB7I	CCANNNNNTGG	1 cut(s)	2000
AccII	CGCG	1 cut(s)	1204
AciI	CCGC	4 cut(s)	1204, 1240, 1721, 2066
AclWI	GGATC	4 cut(s)	21, 252, 1762, 1775
AcoI	YGGCCR	3 cut(s)	792, 1264, 1826
AcsI	RAATTY	5 cut(s)	259, 532, 968, 1189, 1285
AcuI	CTGAAG	2 cut(s)	632, 855
AcyI	GRCGYC	1 cut(s)	1537
AfaI	GTAC	2 cut(s)	1208, 1399
AfiI	CCNNNNNNNGG	5 cut(s)	639, 1348, 1546, 1863, 2000
AflII	CTTAAG	1 cut(s)	95
AflIII	ACRYGT	1 cut(s)	198
AgsI	TTSAA	8 cut(s)	196, 258, 715, 968, 974, 1187, 1624, 1781
AjiI	CACGTC	1 cut(s)	545
AjnI	CCWGG	5 cut(s)	794, 1247, 1813, 1862, 1930
AjuI	GAANNNNNNNTTGG	2 cut(s)	188, 220
AleI	CACNNNNGTG	1 cut(s)	131
Alw21I	GWGCWC	2 cut(s)	368, 561
Alw26I	GTCTC	2 cut(s)	911, 1976
Alw44I	GTGCAC	1 cut(s)	557
AlwI	GGATC	4 cut(s)	21, 252, 1762, 1775
AlwNI	CAGNNNCTG	3 cut(s)	842, 1673, 2000
Ama87I	CYCGRG	2 cut(s)	1839, 1885
AoxI	GGCC	5 cut(s)	792, 1264, 1826, 1910, 1968
ApaLI	GTGCAC	1 cut(s)	557
ApoI	RAATTY	5 cut(s)	259, 532, 968, 1189, 1285
ArsI	GACNNNNNNTTYG	2 cut(s)	797, 829
AspS9I	GGNCC	1 cut(s)	1875
AsuC2I	CCSGG	2 cut(s)	1840, 1841
AsuHPI	GGTGA	2 cut(s)	341, 1991
AsuII	TTCGAA	2 cut(s)	469, 2047
AvaI	CYCGRG	2 cut(s)	1839, 1885
AvaII	GGWCC	1 cut(s)	1875
BaeGI	GKGCMC	1 cut(s)	561
BalI	TGGCCA	3 cut(s)	794, 1266, 1828
BamHI	GGATCC	1 cut(s)	1767
BanI	GGYRCC	1 cut(s)	799
BanII	GRGCYC	2 cut(s)	368, 1847
BbsI	GAAGAC	2 cut(s)	713, 981
Bbv12I	GWGCWC	2 cut(s)	368, 561
BbvCI	CCTCAGC	1 cut(s)	846
BceAI	ACGGC	2 cut(s)	656, 1416
BcgI	CGANNNNNNTGC	4 cut(s)	1435, 1469, 1927, 1961
BciT130I	CCWGG	5 cut(s)	796, 1249, 1815, 1864, 1932
BciVI	GTATCC	1 cut(s)	1023
BcnI	CCSGG	2 cut(s)	1840, 1841
BcoDI	GTCTC	2 cut(s)	911, 1976
BfaI	CTAG	4 cut(s)	405, 437, 1020, 2074
BfmI	CTRYAG	3 cut(s)	552, 1388, 1485
BfrI	CTTAAG	1 cut(s)	95
BfuAI	ACCTGC	1 cut(s)	1489
BfuI	GTATCC	1 cut(s)	1023
Bme1390I	CCNGG	7 cut(s)	796, 1249, 1815, 1840, 1841, 1864, 1932
Bme18I	GGWCC	1 cut(s)	1875
BmeT110I	CYCGRG	2 cut(s)	1839, 1885
BmgBI	CACGTC	1 cut(s)	545
BmgT120I	GGNCC	1 cut(s)	1875
BmiI	GGNNCC	6 cut(s)	606, 801, 1353, 1750, 1769, 1877
BmrFI	CCNGG	7 cut(s)	796, 1249, 1815, 1840, 1841, 1864, 1932
BmrI	ACTGGG	1 cut(s)	1683
BmsI	GCATC	7 cut(s)	280, 619, 655, 937, 944, 1491, 1540
BmuI	ACTGGG	1 cut(s)	1683
BpiI	GAAGAC	2 cut(s)	713, 981
BpmI	CTGGAG	1 cut(s)	1977
Bpu10I	CCTNAGC	2 cut(s)	846, 2058
Bpu14I	TTCGAA	2 cut(s)	469, 2047
BpuEI	CTTGAG	3 cut(s)	600, 664, 1757
BpuMI	CCSGG	2 cut(s)	1840, 1841
BsaAI	YACGTR	1 cut(s)	1329
BsaBI	GATNNNNATC	2 cut(s)	270, 354
BsaHI	GRCGYC	1 cut(s)	1537
BsaI	GGTCTC	1 cut(s)	911
BsaJI	CCNNGG	4 cut(s)	795, 1829, 1839, 1840
BsaXI	ACNNNNNCTCC	2 cut(s)	1975, 2005
Bsc4I	CCNNNNNNNGG	5 cut(s)	639, 1348, 1546, 1863, 2000
Bse118I	RCCGGY	1 cut(s)	411
Bse1I	ACTGG	7 cut(s)	608, 921, 1078, 1522, 1678, 1994, 2005
Bse8I	GATNNNNATC	2 cut(s)	270, 354
BseBI	CCWGG	5 cut(s)	796, 1249, 1815, 1864, 1932
BseDI	CCNNGG	4 cut(s)	795, 1829, 1839, 1840
BseGI	GGATG	6 cut(s)	217, 307, 451, 856, 967, 1555
BseJI	GATNNNNATC	2 cut(s)	270, 354
BseLI	CCNNNNNNNGG	5 cut(s)	639, 1348, 1546, 1863, 2000
BseNI	ACTGG	7 cut(s)	608, 921, 1078, 1522, 1678, 1994, 2005
BseRI	GAGGAG	1 cut(s)	1954
BseSI	GKGCMC	1 cut(s)	561
BsgI	GTGCAG	1 cut(s)	1779
Bsh1236I	CGCG	1 cut(s)	1204
BshFI	GGCC	5 cut(s)	794, 1266, 1828, 1912, 1970
BshNI	GGYRCC	1 cut(s)	799
BsiHKAI	GWGCWC	2 cut(s)	368, 561
BsiHKCI	CYCGRG	2 cut(s)	1839, 1885
BsiSI	CCGG	3 cut(s)	412, 1016, 1840
BslFI	GGGAC	3 cut(s)	1177, 1861, 1902
BslI	CCNNNNNNNGG	5 cut(s)	639, 1348, 1546, 1863, 2000
BsmAI	GTCTC	2 cut(s)	911, 1976
BsmBI	CGTCTC	1 cut(s)	1976
BsmFI	GGGAC	3 cut(s)	1177, 1861, 1902
BsmI	GAATGC	1 cut(s)	1057
BsnI	GGCC	5 cut(s)	794, 1266, 1828, 1912, 1970
Bso31I	GGTCTC	1 cut(s)	911
BsoBI	CYCGRG	2 cut(s)	1839, 1885
Bsp119I	TTCGAA	2 cut(s)	469, 2047
Bsp1286I	GDGCHC	3 cut(s)	368, 561, 1847
Bsp143I	GATC	6 cut(s)	13, 244, 766, 886, 1258, 1767
BspACI	CCGC	4 cut(s)	1204, 1240, 1721, 2066
BspANI	GGCC	5 cut(s)	794, 1266, 1828, 1912, 1970
BspFNI	CGCG	1 cut(s)	1204
BspHI	TCATGA	1 cut(s)	991
BspLI	GGNNCC	6 cut(s)	606, 801, 1353, 1750, 1769, 1877
BspMAI	CTGCAG	2 cut(s)	556, 1489
BspMI	ACCTGC	1 cut(s)	1489
BspPI	GGATC	4 cut(s)	21, 252, 1762, 1775
BspT104I	TTCGAA	2 cut(s)	469, 2047
BspT107I	GGYRCC	1 cut(s)	799
BspTI	CTTAAG	1 cut(s)	95
BspTNI	GGTCTC	1 cut(s)	911
BsrFI	RCCGGY	1 cut(s)	411
BsrI	ACTGG	7 cut(s)	608, 921, 1078, 1522, 1678, 1994, 2005
BssAI	RCCGGY	1 cut(s)	411
BssECI	CCNNGG	4 cut(s)	795, 1829, 1839, 1840
BssMI	GATC	6 cut(s)	13, 244, 766, 886, 1258, 1767
BssNI	GRCGYC	1 cut(s)	1537
BssT1I	CCWWGG	1 cut(s)	1829
Bst2UI	CCWGG	5 cut(s)	796, 1249, 1815, 1864, 1932
Bst4CI	ACNGT	5 cut(s)	218, 748, 820, 982, 1041
Bst6I	CTCTTC	1 cut(s)	1516
BstACI	GRCGYC	1 cut(s)	1537
BstAFI	CTTAAG	1 cut(s)	95
BstAPI	GCANNNNNTGC	3 cut(s)	842, 1481, 1730
BstBAI	YACGTR	1 cut(s)	1329
BstBI	TTCGAA	2 cut(s)	469, 2047
BstC8I	GCNNGC	4 cut(s)	413, 1946, 2029, 2064
BstEII	GGTNACC	1 cut(s)	1834
BstF5I	GGATG	6 cut(s)	217, 307, 451, 856, 967, 1555
BstFNI	CGCG	1 cut(s)	1204
BstKTI	GATC	6 cut(s)	16, 247, 769, 889, 1261, 1770
BstMAI	GTCTC	2 cut(s)	911, 1976
BstMBI	GATC	6 cut(s)	13, 244, 766, 886, 1258, 1767
BstMWI	GCNNNNNNNGC	4 cut(s)	842, 1481, 1730, 1954
BstNI	CCWGG	5 cut(s)	796, 1249, 1815, 1864, 1932
BstNSI	RCATGY	2 cut(s)	1430, 1897
BstPI	GGTNACC	1 cut(s)	1834
BstSCI	CCNGG	7 cut(s)	794, 1247, 1813, 1838, 1839, 1862, 1930
BstSFI	CTRYAG	3 cut(s)	552, 1388, 1485
BstSLI	GKGCMC	1 cut(s)	561
BstUI	CGCG	1 cut(s)	1204
BstV2I	GAAGAC	2 cut(s)	713, 981
BstX2I	RGATCY	1 cut(s)	1767
BstYI	RGATCY	1 cut(s)	1767
BsuI	GTATCC	1 cut(s)	1023
BsuRI	GGCC	5 cut(s)	794, 1266, 1828, 1912, 1970
BtrI	CACGTC	1 cut(s)	545
BtsCI	GGATG	6 cut(s)	217, 307, 451, 856, 967, 1555
BtsI	GCAGTG	4 cut(s)	561, 1857, 1955, 2011
BveI	ACCTGC	1 cut(s)	1489
Cac8I	GCNNGC	4 cut(s)	413, 1946, 2029, 2064
CaiI	CAGNNNCTG	3 cut(s)	842, 1673, 2000
CciI	TCATGA	1 cut(s)	991
Cfr10I	RCCGGY	1 cut(s)	411
Cfr13I	GGNCC	1 cut(s)	1875
Cfr9I	CCCGGG	1 cut(s)	1839
CseI	GACGC	2 cut(s)	707, 1545
CsiI	ACCWGGT	1 cut(s)	1930
Csp6I	GTAC	2 cut(s)	1207, 1398
CviAII	CATG	8 cut(s)	106, 658, 811, 992, 1262, 1427, 1759, 1894
CviQI	GTAC	2 cut(s)	1207, 1398
DpnI	GATC	6 cut(s)	15, 246, 768, 888, 1260, 1769
DpnII	GATC	6 cut(s)	13, 244, 766, 886, 1258, 1767
EaeI	YGGCCR	3 cut(s)	792, 1264, 1826
Eam1104I	CTCTTC	1 cut(s)	1516
EarI	CTCTTC	1 cut(s)	1516
Ecl136II	GAGCTC	1 cut(s)	366
Eco130I	CCWWGG	1 cut(s)	1829
Eco147I	AGGCCT	1 cut(s)	1912
Eco24I	GRGCYC	2 cut(s)	368, 1847
Eco31I	GGTCTC	1 cut(s)	911
Eco47I	GGWCC	1 cut(s)	1875
Eco53kI	GAGCTC	1 cut(s)	366
Eco57I	CTGAAG	2 cut(s)	632, 855
Eco88I	CYCGRG	2 cut(s)	1839, 1885
Eco91I	GGTNACC	1 cut(s)	1834
EcoICRI	GAGCTC	1 cut(s)	366
EcoO109I	RGGNCCY	1 cut(s)	1875
EcoO65I	GGTNACC	1 cut(s)	1834
EcoRI	GAATTC	1 cut(s)	1285
EcoRII	CCWGG	5 cut(s)	794, 1247, 1813, 1862, 1930
EcoT14I	CCWWGG	1 cut(s)	1829
EcoT38I	GRGCYC	2 cut(s)	368, 1847
ErhI	CCWWGG	1 cut(s)	1829
Esp3I	CGTCTC	1 cut(s)	1976
FaeI	CATG	8 cut(s)	109, 661, 814, 995, 1265, 1430, 1762, 1897
FalI	AAGNNNNNCTT	2 cut(s)	1593, 1625
FaqI	GGGAC	3 cut(s)	1177, 1861, 1902
FatI	CATG	8 cut(s)	105, 657, 810, 991, 1261, 1426, 1758, 1893
FauI	CCCGC	1 cut(s)	2059
FokI	GGATG	6 cut(s)	224, 314, 458, 863, 974, 1562
FriOI	GRGCYC	2 cut(s)	368, 1847
FspBI	CTAG	4 cut(s)	405, 437, 1020, 2074
GsuI	CTGGAG	1 cut(s)	1977
HaeIII	GGCC	5 cut(s)	794, 1266, 1828, 1912, 1970
HapII	CCGG	3 cut(s)	412, 1016, 1840
HgaI	GACGC	2 cut(s)	707, 1545
Hin1I	GRCGYC	1 cut(s)	1537
Hin1II	CATG	8 cut(s)	109, 661, 814, 995, 1265, 1430, 1762, 1897
HincII	GTYRAC	3 cut(s)	751, 816, 1576
HindII	GTYRAC	3 cut(s)	751, 816, 1576
HindIII	AAGCTT	1 cut(s)	92
HpaI	GTTAAC	1 cut(s)	1576
HpaII	CCGG	3 cut(s)	412, 1016, 1840
HphI	GGTGA	2 cut(s)	341, 1991
Hpy166II	GTNNAC	8 cut(s)	559, 751, 816, 1037, 1306, 1535, 1576, 1707
Hpy188III	TCNNGA	8 cut(s)	873, 992, 1349, 1560, 1614, 1742, 1802, 1885
Hpy8I	GTNNAC	8 cut(s)	559, 751, 816, 1037, 1306, 1535, 1576, 1707
Hpy99I	CGWCG	3 cut(s)	125, 642, 780
HpyAV	CCTTC	6 cut(s)	549, 879, 1100, 1429, 1708, 2025
HpyCH4III	ACNGT	5 cut(s)	218, 748, 820, 982, 1041
HpyCH4IV	ACGT	3 cut(s)	198, 544, 1328
HpyF10VI	GCNNNNNNNGC	4 cut(s)	842, 1481, 1730, 1954
HpySE526I	ACGT	3 cut(s)	198, 544, 1328
Hsp92I	GRCGYC	1 cut(s)	1537
Hsp92II	CATG	8 cut(s)	109, 661, 814, 995, 1265, 1430, 1762, 1897
KroI	GCCGGC	1 cut(s)	411
KroNI	GCCGGC	1 cut(s)	413
KspAI	GTTAAC	1 cut(s)	1576
Kzo9I	GATC	6 cut(s)	13, 244, 766, 886, 1258, 1767
LmnI	GCTCC	7 cut(s)	6, 1351, 1457, 1790, 1816, 1941, 2017
LweI	GCATC	7 cut(s)	280, 619, 655, 937, 944, 1491, 1540
MabI	ACCWGGT	1 cut(s)	1930
MaeI	CTAG	4 cut(s)	405, 437, 1020, 2074
MaeII	ACGT	3 cut(s)	198, 544, 1328
MaeIII	GTNAC	8 cut(s)	329, 400, 853, 1141, 1657, 1761, 1834, 1996
MalI	GATC	6 cut(s)	15, 246, 768, 888, 1260, 1769
MboI	GATC	6 cut(s)	13, 244, 766, 886, 1258, 1767
MboII	GAAGA	8 cut(s)	188, 512, 713, 986, 1231, 1281, 1503, 1510
MfeI	CAATTG	1 cut(s)	1004
MflI	RGATCY	1 cut(s)	1767
MhlI	GDGCHC	3 cut(s)	368, 561, 1847
MlsI	TGGCCA	3 cut(s)	794, 1266, 1828
MluNI	TGGCCA	3 cut(s)	794, 1266, 1828
MlyI	GAGTC	3 cut(s)	316, 746, 870
MmeI	TCCRAC	2 cut(s)	1009, 1435
Mox20I	TGGCCA	3 cut(s)	794, 1266, 1828
MroNI	GCCGGC	1 cut(s)	411
MscI	TGGCCA	3 cut(s)	794, 1266, 1828
MseI	TTAA	7 cut(s)	42, 96, 155, 335, 1122, 1575, 2036
MslI	CAYNNNNRTG	1 cut(s)	131
Msp20I	TGGCCA	3 cut(s)	794, 1266, 1828
MspA1I	CMGCKG	2 cut(s)	1280, 2066
MspCI	CTTAAG	1 cut(s)	95
MspI	CCGG	3 cut(s)	412, 1016, 1840
MspR9I	CCNGG	7 cut(s)	796, 1249, 1815, 1840, 1841, 1864, 1932
MunI	CAATTG	1 cut(s)	1004
Mva1269I	GAATGC	1 cut(s)	1057
MvaI	CCWGG	5 cut(s)	796, 1249, 1815, 1864, 1932
MvnI	CGCG	1 cut(s)	1204
MwoI	GCNNNNNNNGC	4 cut(s)	842, 1481, 1730, 1954
NaeI	GCCGGC	1 cut(s)	413
NciI	CCSGG	2 cut(s)	1840, 1841
NdeII	GATC	6 cut(s)	13, 244, 766, 886, 1258, 1767
NgoMIV	GCCGGC	1 cut(s)	411
NlaIII	CATG	8 cut(s)	109, 661, 814, 995, 1265, 1430, 1762, 1897
NlaIV	GGNNCC	6 cut(s)	606, 801, 1353, 1750, 1769, 1877
NmuCI	GTSAC	3 cut(s)	329, 1761, 1996
NspI	RCATGY	2 cut(s)	1430, 1897
NspV	TTCGAA	2 cut(s)	469, 2047
OliI	CACNNNNGTG	1 cut(s)	131
PagI	TCATGA	1 cut(s)	991
PaqCI	CACCTGC	1 cut(s)	1489
PceI	AGGCCT	1 cut(s)	1912
PcsI	WCGNNNNNNNCGW	1 cut(s)	895
PctI	GAATGC	1 cut(s)	1057
PdiI	GCCGGC	1 cut(s)	413
PfeI	GAWTC	9 cut(s)	56, 221, 287, 350, 571, 781, 1490, 1556, 1664
PflFI	GACNNNGTC	2 cut(s)	894, 980
PflMI	CCANNNNNTGG	1 cut(s)	2000
PfoI	TCCNGGA	1 cut(s)	1247
PleI	GAGTC	3 cut(s)	315, 746, 869
PpsI	GAGTC	3 cut(s)	315, 746, 869
Ppu21I	YACGTR	1 cut(s)	1329
PpuMI	RGGWCCY	1 cut(s)	1875
Psp124BI	GAGCTC	1 cut(s)	368
Psp5II	RGGWCCY	1 cut(s)	1875
Psp6I	CCWGG	5 cut(s)	794, 1247, 1813, 1862, 1930
PspEI	GGTNACC	1 cut(s)	1834
PspGI	CCWGG	5 cut(s)	794, 1247, 1813, 1862, 1930
PspN4I	GGNNCC	6 cut(s)	606, 801, 1353, 1750, 1769, 1877
PspPI	GGNCC	1 cut(s)	1875
PspPPI	RGGWCCY	1 cut(s)	1875
PstI	CTGCAG	2 cut(s)	556, 1489
PstNI	CAGNNNCTG	3 cut(s)	842, 1673, 2000
PsuI	RGATCY	1 cut(s)	1767
PsyI	GACNNNGTC	2 cut(s)	894, 980
PvuII	CAGCTG	1 cut(s)	1280
RsaI	GTAC	2 cut(s)	1208, 1399
RsaNI	GTAC	2 cut(s)	1207, 1398
RseI	CAYNNNNRTG	1 cut(s)	131
SacI	GAGCTC	1 cut(s)	368
SaqAI	TTAA	7 cut(s)	42, 96, 155, 335, 1122, 1575, 2036
Sau3AI	GATC	6 cut(s)	13, 244, 766, 886, 1258, 1767
Sau96I	GGNCC	1 cut(s)	1875
SchI	GAGTC	3 cut(s)	316, 746, 870
ScrFI	CCNGG	7 cut(s)	796, 1249, 1815, 1840, 1841, 1864, 1932
SduI	GDGCHC	3 cut(s)	368, 561, 1847
SexAI	ACCWGGT	1 cut(s)	1930
SfaNI	GCATC	7 cut(s)	280, 619, 655, 937, 944, 1491, 1540
SfcI	CTRYAG	3 cut(s)	552, 1388, 1485
SfuI	TTCGAA	2 cut(s)	469, 2047
SinI	GGWCC	1 cut(s)	1875
SmaI	CCCGGG	1 cut(s)	1841
SmiMI	CAYNNNNRTG	1 cut(s)	131
SmlI	CTYRAG	4 cut(s)	95, 615, 679, 1772
SmoI	CTYRAG	4 cut(s)	95, 615, 679, 1772
SseBI	AGGCCT	1 cut(s)	1912
SsiI	CCGC	4 cut(s)	1204, 1240, 1721, 2066
SspMI	CTAG	4 cut(s)	405, 437, 1020, 2074
SstI	GAGCTC	1 cut(s)	368
StuI	AGGCCT	1 cut(s)	1912
StyD4I	CCNGG	7 cut(s)	794, 1247, 1813, 1838, 1839, 1862, 1930
StyI	CCWWGG	1 cut(s)	1829
TaaI	ACNGT	5 cut(s)	218, 748, 820, 982, 1041
TaiI	ACGT	3 cut(s)	201, 547, 1331
TaqI	TCGA	8 cut(s)	21, 469, 637, 775, 889, 1561, 1615, 2047
TaqII	GACCGA	1 cut(s)	564
TauI	GCSGC	2 cut(s)	1243, 1724
TfiI	GAWTC	9 cut(s)	56, 221, 287, 350, 571, 781, 1490, 1556, 1664
Tru1I	TTAA	7 cut(s)	42, 96, 155, 335, 1122, 1575, 2036
Tru9I	TTAA	7 cut(s)	42, 96, 155, 335, 1122, 1575, 2036
TseFI	GTSAC	3 cut(s)	329, 1761, 1996
Tsp45I	GTSAC	3 cut(s)	329, 1761, 1996
TspDTI	ATGAA	6 cut(s)	94, 462, 839, 980, 1448, 1747
TspGWI	ACGGA	4 cut(s)	793, 1726, 1761, 1780
TspMI	CCCGGG	1 cut(s)	1839
Tth111I	GACNNNGTC	2 cut(s)	894, 980
Van91I	CCANNNNNTGG	1 cut(s)	2000
Vha464I	CTTAAG	1 cut(s)	95
VneI	GTGCAC	1 cut(s)	557
VpaK11BI	GGWCC	1 cut(s)	1875
XapI	RAATTY	5 cut(s)	259, 532, 968, 1189, 1285
XceI	RCATGY	2 cut(s)	1430, 1897
XmaI	CCCGGG	1 cut(s)	1839
XspI	CTAG	4 cut(s)	405, 437, 1020, 2074

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.