Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0006139

Physical Location & Seq

Genomic Coordinates Reverse (-)

66863183 .. 66868503

Gene Structure 5321 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000030749

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGGGGAGCGTCGATCGAGTCGACGATCGGACCTTTAGGGTTAATTTGACCGGCGATTCAGTTATTAAGCTGAGGGACAGCGTCGGCGAGAAGCTTAAGGAGTTTATGGGGGATTACACCGATGACACTCTTGTGGAGTATGTAATTGTCCTTTTAAAGAATGGCAGGCGTAAAGAAGAAGCGAAGAGCGAGTTGAATGTCTTTTTAGGGGATGACAGTGATTCTTTTGTTTCTTGGTTGTGGGATCATCTGGCTTCAAATACCGATTTGCATGTACAACCTCAGGATTCTTATATGGAAGATGCAAGTAAAAGGAAATCCTTATCAGAGGACGAAAAAGGAAAAAATGATTCTCATCATTTGGGTTCTGCGCCAGACAAAGTTAAGTCTAACAAATCATCTAGAAGCCGGCACAACAGAGAATGGAGAGGACTAGTGAGGGATGCAGCTGAACCCCCTCCTTTTCTAAGCTCTGAGCTTGGAAGTGTTCATGTAGAGGAAAAAAGTCACAGTAAGGTCAGTCGTGCCAAATCTCCTTCCCTGCAACCTGCAGCTCAGAGGAAAAGGATTCGGCCTGATGAGCGGCAGCATTTAAAGAGGGAAGTAGTTTCTCAAGGGAATATTGATGCCCCACGTCGGCTACTCCAATTTGCTGTCCGTGATGCGCTGACAACTTCAAGGCATTCCAATTCAGCAACAGAGCCCACCTTGAAGCGTCTCCGTTCTGTGGTTTCTACGTCCACCGGTGACTCATCATTGGTTGATCCTCCTCGGCGACTTCAGTCTGTTGCGAGAGTGCCAAATTCCATGGCAACAGTAATGAAAGCTGTTGCAGAGGCTGCTGAAGATGTAACAAGAGTTAAATCTTCAGGGAGTGTGTTTGATCGACTTGGTCGTGGTATGGATGTCTCAGAGACCAGTGGGCCACTTGCATCGTTTAGAGAAGCTGCTACTGAGGATGTTGACTATGAAGAAATTCATGAAAACACCCGATCGACATATCTGCAAAGAAGTCAATACGGTGGGCAGTATGTTGGGAACACTATGTTAGATAGTGAAACTGGCTTGCCTTCTGATTCTGTTTCAGACAATGAAGGGTTTGATGATGTCAATGTTAAGGGGCGTAGAGTCACTGATGTTTCTCAAACTGGGACATCTGGTGGTAACAACGGTGACAATTCACTGATGGTGCAGTACAGTGTAGCTAAGAATGGTGATGATCTAAGGCGGATGTCAACAAACAAAGATCAGGGTCAACCTCCTGCACCTGCAAATAATTCTCATAAGATTGTGAACATATCCGTGAATGTCAATACTTGGAAACCACCCCATTTTCAGGAGCCAAGGGAGGGAGCTGAGCTGGACGATTGGAAATCTGTACAGGATATTGAAGCAAGCGCTCCAAATTCTGATTTGCTTTTAATGAAGAACAGCAACCCTGTGCCAGTTAGTAATGGAAATGCAAATCCTGCCGCAGATTCTCAAAAGGTGCTTTCATCGTCTACTGATCGTGCAGGTCTATATGCTGCCGGTCGTCCTTTGGAGGATGCAGATTCACGAACTATCTTTGTTAGCAATGTCCATTTTGCTGCTACGAAAGATAGTCTTTGTAGACATTTTAACAAGTTTGGTGAAGTGCTAAAGGTGGTGATACTTACTGATGCAGCAACTGGACAACCTAGAGGGTCGGCTTATGTAGAGTTCATGCGAAAGGAGGCAGCAGACAATGCATTATCTCTGGATGGCACCTCGTTTATGTCACGGATCCTTAAGGTCGTTAAGAGGAGTGCAGCCCACCAAGAAGCCGCAGCTCCTGCCATGACATGGCCACGTGTAACCCGTGGTTCTTCATTTTCCACTGCCAGGTTTTCTAGGGCACCATTCCCAAGAGGCATGACAGGTGGATATAGGCCTCGCGCCTTAATCAAACCAGGTGCCAGGAGCATGCAGTGGAAGCGGGATTCTCAAACCACTCCTGGTGAAAGTGGCACTCCAGTGTCTGGCATGGCTGCTCCCTCACCAACAGGTCGTAGTCTCACCTATGTTCGAACAGAAGCTAAGCCAGCGGGCAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0002237 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010033 GO:0016234 GO:0016310 GO:0019538 GO:0019899 GO:0023014 GO:0023052 GO:0032496 GO:0032991 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0042405 GO:0043085 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051338 GO:0051347 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0065009 GO:0070063 GO:0070887 GO:0071216 GO:0071219 GO:0071222 GO:0071310 GO:0071396 GO:0071704 GO:1901564 GO:1901700 GO:1901701 GO:1904245 GO:1904247 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PWI RRM_1

Protein Analysis

692

Amino Acids

75.66

Weight (kDa)

8.88

Isoelectric Point (pI)

48.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PWI	PF01480	28 - 87	3.2e-07	PWI domain
RRM_1	PF00076	522 - 590	1.1e-15	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006139)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12640 AT3G12640 AT3G12640 AT3G12640
fragaria_vesca	FvH4_7g00830 FvH4_7g00830 FvH4_7g00830
malus_domestica	MD02G1314400.v1.1 MD07G1007800.v1.1
prunus_persica	Prupe.2G010500_v2.0.a1
pyrus_communis	pycom02g26360 pycom07g00640
rosa_chinensis	RchiOBHm_Chr1g0314991
rosa_laevigata	RLG00000030749
rosa_multiflora	Rmu_co8101366.1_g000001 Rmu_co8205378.1_g000001 Rmu_sc0004180.1_g000037 Rmu_sc0017414.1_g000001 Rmu_sc0023178.1_g000001 Rmu_sc0036535.1_g000001
rosa_roxburghii	Rroxscaffold_4G00331600
rosa_rugosa	Rorug01G0004200
rosa_samantha	Rh1AG014700 Rh1BG007100 Rh1CG013000 Rh1DG008500
rosa_wichuraiana	Rw1G000730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1276
Acc36I	ACCTGC	3 cut(s)	556, 1276, 1505
AccB1I	GGYRCC	3 cut(s)	1745, 1876, 1934
AccB7I	CCANNNNNTGG	2 cut(s)	1824, 2000
AccBSI	CCGCTC	1 cut(s)	583
AccI	GTMKAC	3 cut(s)	21, 1502, 1612
AccII	CGCG	1 cut(s)	1917
AciI	CCGC	6 cut(s)	583, 1228, 1473, 1806, 1957, 2066
AclWI	GGATC	4 cut(s)	252, 758, 1759, 1772
AcoI	YGGCCR	1 cut(s)	1826
AcsI	RAATTY	3 cut(s)	802, 975, 1405
AcuI	CTGAAG	3 cut(s)	764, 852, 864
AcvI	CACGTG	1 cut(s)	1832
AfaI	GTAC	3 cut(s)	276, 1196, 1380
AfeI	AGCGCT	1 cut(s)	1399
AfiI	CCNNNNNNNGG	7 cut(s)	636, 727, 1336, 1349, 1824, 1863, 2000
AflII	CTTAAG	2 cut(s)	95, 1769
AflIII	ACRYGT	1 cut(s)	1831
AgeI	ACCGGT	1 cut(s)	743
AgsI	TTSAA	5 cut(s)	196, 258, 678, 712, 1391
AhlI	ACTAGT	1 cut(s)	433
AjiI	CACGTC	1 cut(s)	635
AjnI	CCWGG	4 cut(s)	1862, 1930, 1937, 1975
AleI	CACNNNNGTG	2 cut(s)	131, 1994
Alw26I	GTCTC	4 cut(s)	722, 908, 913, 2039
AlwI	GGATC	4 cut(s)	252, 758, 1759, 1772
AlwNI	CAGNNNCTG	4 cut(s)	839, 1670, 1814, 2000
Aor51HI	AGCGCT	1 cut(s)	1399
AoxI	GGCC	4 cut(s)	572, 923, 1826, 1910
ApoI	RAATTY	3 cut(s)	802, 975, 1405
AsiGI	ACCGGT	1 cut(s)	743
Asp700I	GAANNNNTTC	1 cut(s)	975
AspLEI	GCGC	4 cut(s)	373, 667, 1400, 1919
AspS9I	GGNCC	2 cut(s)	30, 923
AsuHPI	GGTGA	8 cut(s)	758, 1184, 1226, 1643, 1660, 1991, 2010, 2029
AsuII	TTCGAA	1 cut(s)	2047
AvaII	GGWCC	1 cut(s)	30
AxyI	CCTNAGG	1 cut(s)	282
BaeGI	GKGCMC	1 cut(s)	1879
BalI	TGGCCA	1 cut(s)	1828
BamHI	GGATCC	1 cut(s)	1764
BanI	GGYRCC	3 cut(s)	1745, 1876, 1934
BanII	GRGCYC	1 cut(s)	705
BbrPI	CACGTG	1 cut(s)	1832
BbvCI	CCTCAGC	1 cut(s)	71
BccI	CCATC	2 cut(s)	1180, 1736
BcgI	CGANNNNNNTGC	2 cut(s)	985, 1019
BciT130I	CCWGG	4 cut(s)	1864, 1932, 1939, 1977
BcoDI	GTCTC	4 cut(s)	722, 908, 913, 2039
BcuI	ACTAGT	1 cut(s)	433
BfaI	CTAG	4 cut(s)	402, 434, 1680, 1872
BfmI	CTRYAG	1 cut(s)	549
BfoI	RGCGCY	1 cut(s)	1401
BfrI	CTTAAG	2 cut(s)	95, 1769
BfuAI	ACCTGC	3 cut(s)	556, 1276, 1505
BlpI	GCTNAGC	2 cut(s)	1356, 2058
Bme1390I	CCNGG	4 cut(s)	1864, 1932, 1939, 1977
Bme18I	GGWCC	1 cut(s)	30
BmgBI	CACGTC	1 cut(s)	635
BmgT120I	GGNCC	2 cut(s)	30, 923
BmiI	GGNNCC	5 cut(s)	1341, 1747, 1766, 1878, 1936
BmrFI	CCNGG	4 cut(s)	1864, 1932, 1939, 1977
BmrI	ACTGGG	1 cut(s)	1158
BmsI	GCATC	7 cut(s)	292, 433, 616, 652, 941, 1537, 1651
BmuI	ACTGGG	1 cut(s)	1158
BoxI	GACNNNNGTC	1 cut(s)	781
BpmI	CTGGAG	1 cut(s)	1977
Bpu10I	CCTNAGC	1 cut(s)	71
Bpu1102I	GCTNAGC	2 cut(s)	1356, 2058
Bpu14I	TTCGAA	1 cut(s)	2047
BpuEI	CTTGAG	1 cut(s)	597
BsaAI	YACGTR	1 cut(s)	1832
BsaBI	GATNNNNATC	1 cut(s)	354
BsaI	GGTCTC	1 cut(s)	908
BsaJI	CCNNGG	4 cut(s)	770, 807, 1343, 1840
BsaWI	WCCGGW	1 cut(s)	743
Bsc4I	CCNNNNNNNGG	7 cut(s)	636, 727, 1336, 1349, 1824, 1863, 2000
Bse118I	RCCGGY	4 cut(s)	50, 408, 743, 1529
Bse1I	ACTGG	6 cut(s)	918, 1066, 1153, 1445, 1675, 1994
Bse21I	CCTNAGG	1 cut(s)	282
Bse3DI	GCAATG	1 cut(s)	1582
Bse8I	GATNNNNATC	1 cut(s)	354
BseBI	CCWGG	4 cut(s)	1864, 1932, 1939, 1977
BseDI	CCNNGG	4 cut(s)	770, 807, 1343, 1840
BseGI	GGATG	7 cut(s)	217, 448, 910, 964, 1236, 1552, 1747
BseJI	GATNNNNATC	1 cut(s)	354
BseLI	CCNNNNNNNGG	7 cut(s)	636, 727, 1336, 1349, 1824, 1863, 2000
BseMI	GCAATG	1 cut(s)	1582
BseMII	CTCAG	7 cut(s)	62, 296, 465, 569, 924, 945, 1347
BseNI	ACTGG	6 cut(s)	918, 1066, 1153, 1445, 1675, 1994
BseRI	GAGGAG	2 cut(s)	759, 1798
BseSI	GKGCMC	1 cut(s)	1879
BsgI	GTGCAG	4 cut(s)	1211, 1248, 1533, 1809
Bsh1236I	CGCG	1 cut(s)	1917
Bsh1285I	CGRYCG	4 cut(s)	16, 28, 995, 1534
BshFI	GGCC	4 cut(s)	574, 925, 1828, 1912
BshNI	GGYRCC	3 cut(s)	1745, 1876, 1934
BshTI	ACCGGT	1 cut(s)	743
BsiEI	CGRYCG	4 cut(s)	16, 28, 995, 1534
BsiSI	CCGG	4 cut(s)	51, 409, 744, 1530
BslFI	GGGAC	2 cut(s)	89, 1165
BslI	CCNNNNNNNGG	7 cut(s)	636, 727, 1336, 1349, 1824, 1863, 2000
BsmAI	GTCTC	4 cut(s)	722, 908, 913, 2039
BsmBI	CGTCTC	1 cut(s)	722
BsmFI	GGGAC	2 cut(s)	89, 1165
BsmI	GAATGC	1 cut(s)	682
BsnI	GGCC	4 cut(s)	574, 925, 1828, 1912
Bso31I	GGTCTC	1 cut(s)	908
Bsp119I	TTCGAA	1 cut(s)	2047
Bsp1286I	GDGCHC	2 cut(s)	705, 1879
Bsp1407I	TGTACA	2 cut(s)	274, 1378
Bsp1720I	GCTNAGC	2 cut(s)	1356, 2058
Bsp19I	CCATGG	1 cut(s)	807
BspACI	CCGC	6 cut(s)	583, 1228, 1473, 1806, 1957, 2066
BspANI	GGCC	4 cut(s)	574, 925, 1828, 1912
BspCNI	CTCAG	7 cut(s)	63, 295, 466, 568, 923, 946, 1348
BspFNI	CGCG	1 cut(s)	1917
BspHI	TCATGA	1 cut(s)	979
BspLI	GGNNCC	5 cut(s)	1341, 1747, 1766, 1878, 1936
BspMAI	CTGCAG	1 cut(s)	553
BspMI	ACCTGC	3 cut(s)	556, 1276, 1505
BspPI	GGATC	4 cut(s)	252, 758, 1759, 1772
BspQI	GCTCTTC	1 cut(s)	179
BspT104I	TTCGAA	1 cut(s)	2047
BspT107I	GGYRCC	3 cut(s)	1745, 1876, 1934
BspTI	CTTAAG	2 cut(s)	95, 1769
BspTNI	GGTCTC	1 cut(s)	908
BsrBI	CCGCTC	1 cut(s)	583
BsrDI	GCAATG	1 cut(s)	1582
BsrFI	RCCGGY	4 cut(s)	50, 408, 743, 1529
BsrGI	TGTACA	2 cut(s)	274, 1378
BsrI	ACTGG	6 cut(s)	918, 1066, 1153, 1445, 1675, 1994
BssAI	RCCGGY	4 cut(s)	50, 408, 743, 1529
BssECI	CCNNGG	4 cut(s)	770, 807, 1343, 1840
BssT1I	CCWWGG	2 cut(s)	807, 1343
Bst2UI	CCWGG	4 cut(s)	1864, 1932, 1939, 1977
Bst4CI	ACNGT	6 cut(s)	218, 512, 817, 1022, 1172, 1199
Bst6I	CTCTTC	1 cut(s)	179
BstAFI	CTTAAG	2 cut(s)	95, 1769
BstAPI	GCANNNNNTGC	4 cut(s)	839, 1469, 1727, 1814
BstAUI	TGTACA	2 cut(s)	274, 1378
BstBAI	YACGTR	1 cut(s)	1832
BstBI	TTCGAA	1 cut(s)	2047
BstC8I	GCNNGC	7 cut(s)	167, 410, 1067, 1396, 1946, 2064, 2068
BstDSI	CCRYGG	2 cut(s)	807, 1840
BstF5I	GGATG	7 cut(s)	217, 448, 910, 964, 1236, 1552, 1747
BstFNI	CGCG	1 cut(s)	1917
BstH2I	RGCGCY	1 cut(s)	1401
BstHHI	GCGC	4 cut(s)	373, 667, 1400, 1919
BstMAI	GTCTC	4 cut(s)	722, 908, 913, 2039
BstMCI	CGRYCG	4 cut(s)	16, 28, 995, 1534
BstMWI	GCNNNNNNNGC	7 cut(s)	580, 839, 1469, 1727, 1814, 1954, 2063
BstNI	CCWGG	4 cut(s)	1864, 1932, 1939, 1977
BstNSI	RCATGY	2 cut(s)	275, 1948
BstPAI	GACNNNNGTC	1 cut(s)	781
BstSCI	CCNGG	4 cut(s)	1862, 1930, 1937, 1975
BstSFI	CTRYAG	1 cut(s)	549
BstSLI	GKGCMC	1 cut(s)	1879
BstUI	CGCG	1 cut(s)	1917
BstX2I	RGATCY	1 cut(s)	1764
BstYI	RGATCY	1 cut(s)	1764
Bsu36I	CCTNAGG	1 cut(s)	282
BsuRI	GGCC	4 cut(s)	574, 925, 1828, 1912
BtgI	CCRYGG	2 cut(s)	807, 1840
BtrI	CACGTC	1 cut(s)	635
BtsCI	GGATG	7 cut(s)	217, 448, 910, 964, 1236, 1552, 1747
BtsI	GCAGTG	2 cut(s)	1857, 1955
BtsIMutI	CAGTG	8 cut(s)	223, 925, 1131, 1181, 1204, 1857, 1955, 2001
BveI	ACCTGC	3 cut(s)	556, 1276, 1505
Cac8I	GCNNGC	7 cut(s)	167, 410, 1067, 1396, 1946, 2064, 2068
CaiI	CAGNNNCTG	4 cut(s)	839, 1670, 1814, 2000
CciI	TCATGA	1 cut(s)	979
CfoI	GCGC	4 cut(s)	373, 667, 1400, 1919
Cfr10I	RCCGGY	4 cut(s)	50, 408, 743, 1529
Cfr13I	GGNCC	2 cut(s)	30, 923
CseI	GACGC	2 cut(s)	70, 704
CsiI	ACCWGGT	1 cut(s)	1930
Csp6I	GTAC	3 cut(s)	275, 1195, 1379
CspAI	ACCGGT	1 cut(s)	743
CviQI	GTAC	3 cut(s)	275, 1195, 1379
DraI	TTTAAA	2 cut(s)	156, 594
EaeI	YGGCCR	1 cut(s)	1826
Eam1104I	CTCTTC	1 cut(s)	179
EarI	CTCTTC	1 cut(s)	179
EciI	GGCGGA	1 cut(s)	1243
Eco130I	CCWWGG	2 cut(s)	807, 1343
Eco147I	AGGCCT	1 cut(s)	1912
Eco24I	GRGCYC	1 cut(s)	705
Eco31I	GGTCTC	1 cut(s)	908
Eco47I	GGWCC	1 cut(s)	30
Eco47III	AGCGCT	1 cut(s)	1399
Eco57I	CTGAAG	3 cut(s)	764, 852, 864
Eco72I	CACGTG	1 cut(s)	1832
Eco81I	CCTNAGG	1 cut(s)	282
EcoRII	CCWGG	4 cut(s)	1862, 1930, 1937, 1975
EcoT14I	CCWWGG	2 cut(s)	807, 1343
EcoT22I	ATGCAT	1 cut(s)	1732
EcoT38I	GRGCYC	1 cut(s)	705
ErhI	CCWWGG	2 cut(s)	807, 1343
Esp3I	CGTCTC	1 cut(s)	722
FalI	AAGNNNNNCTT	2 cut(s)	1590, 1622
FaqI	GGGAC	2 cut(s)	89, 1165
FauI	CCCGC	2 cut(s)	1950, 2059
FblI	GTMKAC	3 cut(s)	21, 1502, 1612
FokI	GGATG	7 cut(s)	224, 455, 917, 971, 1243, 1559, 1754
FriOI	GRGCYC	1 cut(s)	705
FspBI	CTAG	4 cut(s)	402, 434, 1680, 1872
GlaI	GCGC	4 cut(s)	372, 666, 1399, 1918
GsuI	CTGGAG	1 cut(s)	1977
HaeII	RGCGCY	1 cut(s)	1401
HaeIII	GGCC	4 cut(s)	574, 925, 1828, 1912
HapII	CCGG	4 cut(s)	51, 409, 744, 1530
HgaI	GACGC	2 cut(s)	70, 704
HhaI	GCGC	4 cut(s)	373, 667, 1400, 1919
Hin6I	GCGC	4 cut(s)	371, 665, 1398, 1917
HinP1I	GCGC	4 cut(s)	371, 665, 1398, 1917
HincII	GTYRAC	4 cut(s)	22, 964, 1236, 1256
HindII	GTYRAC	4 cut(s)	22, 964, 1236, 1256
HindIII	AAGCTT	1 cut(s)	92
HpaII	CCGG	4 cut(s)	51, 409, 744, 1530
HphI	GGTGA	8 cut(s)	758, 1184, 1226, 1643, 1660, 1991, 2010, 2029
Hpy166II	GTNNAC	8 cut(s)	22, 741, 964, 1236, 1256, 1294, 1503, 1613
Hpy188I	TCNGA	8 cut(s)	30, 328, 475, 558, 913, 1075, 1087, 1411
Hpy188III	TCNNGA	6 cut(s)	284, 402, 980, 1337, 1557, 1739
Hpy8I	GTNNAC	8 cut(s)	22, 741, 964, 1236, 1256, 1294, 1503, 1613
Hpy99I	CGWCG	4 cut(s)	14, 26, 86, 639
HpyAV	CCTTC	3 cut(s)	546, 1080, 1088
HpyCH4III	ACNGT	6 cut(s)	218, 512, 817, 1022, 1172, 1199
HpyCH4IV	ACGT	3 cut(s)	634, 737, 1831
HpyF10VI	GCNNNNNNNGC	7 cut(s)	580, 839, 1469, 1727, 1814, 1954, 2063
HpySE526I	ACGT	3 cut(s)	634, 737, 1831
HspAI	GCGC	4 cut(s)	371, 665, 1398, 1917
KroI	GCCGGC	1 cut(s)	408
KroNI	GCCGGC	1 cut(s)	410
LguI	GCTCTTC	1 cut(s)	179
LmnI	GCTCC	7 cut(s)	6, 1339, 1352, 1405, 1816, 1941, 2017
LweI	GCATC	7 cut(s)	292, 433, 616, 652, 941, 1537, 1651
MabI	ACCWGGT	1 cut(s)	1930
MaeI	CTAG	4 cut(s)	402, 434, 1680, 1872
MaeII	ACGT	3 cut(s)	634, 737, 1831
MaeIII	GTNAC	8 cut(s)	506, 746, 850, 1129, 1163, 1172, 1758, 1834
MbiI	CCGCTC	1 cut(s)	583
MboII	GAAGA	8 cut(s)	188, 196, 311, 857, 858, 983, 1438, 1839
MflI	RGATCY	1 cut(s)	1764
MhlI	GDGCHC	2 cut(s)	705, 1879
MlsI	TGGCCA	1 cut(s)	1828
MluNI	TGGCCA	1 cut(s)	1828
MlyI	GAGTC	3 cut(s)	27, 743, 1137
Mox20I	TGGCCA	1 cut(s)	1828
Mph1103I	ATGCAT	1 cut(s)	1732
MroNI	GCCGGC	1 cut(s)	408
MroXI	GAANNNNTTC	1 cut(s)	975
MscI	TGGCCA	1 cut(s)	1828
MslI	CAYNNNNRTG	3 cut(s)	131, 1301, 1994
Msp20I	TGGCCA	1 cut(s)	1828
MspA1I	CMGCKG	2 cut(s)	449, 2066
MspCI	CTTAAG	2 cut(s)	95, 1769
MspI	CCGG	4 cut(s)	51, 409, 744, 1530
MspR9I	CCNGG	4 cut(s)	1864, 1932, 1939, 1977
Mva1269I	GAATGC	1 cut(s)	682
MvaI	CCWGG	4 cut(s)	1864, 1932, 1939, 1977
MvnI	CGCG	1 cut(s)	1917
MwoI	GCNNNNNNNGC	7 cut(s)	580, 839, 1469, 1727, 1814, 1954, 2063
NaeI	GCCGGC	1 cut(s)	410
NcoI	CCATGG	1 cut(s)	807
NgoMIV	GCCGGC	1 cut(s)	408
NlaIV	GGNNCC	5 cut(s)	1341, 1747, 1766, 1878, 1936
NmeAIII	GCCGAG	1 cut(s)	751
NmuCI	GTSAC	5 cut(s)	506, 746, 1129, 1172, 1758
NsiI	ATGCAT	1 cut(s)	1732
NspI	RCATGY	2 cut(s)	275, 1948
NspV	TTCGAA	1 cut(s)	2047
OliI	CACNNNNGTG	2 cut(s)	131, 1994
PaeI	GCATGC	1 cut(s)	1948
PagI	TCATGA	1 cut(s)	979
PaqCI	CACCTGC	1 cut(s)	1276
PceI	AGGCCT	1 cut(s)	1912
PciSI	GCTCTTC	1 cut(s)	179
PcsI	WCGNNNNNNNCGW	3 cut(s)	18, 892, 1837
PctI	GAATGC	1 cut(s)	682
PdiI	GCCGGC	1 cut(s)	410
PdmI	GAANNNNTTC	1 cut(s)	975
PfeI	GAWTC	9 cut(s)	56, 221, 287, 350, 568, 1076, 1478, 1553, 1961
PflFI	GACNNNGTC	2 cut(s)	80, 891
PflMI	CCANNNNNTGG	2 cut(s)	1824, 2000
PinAI	ACCGGT	1 cut(s)	743
Ple19I	CGATCG	3 cut(s)	16, 28, 995
PleI	GAGTC	3 cut(s)	26, 743, 1136
PmaCI	CACGTG	1 cut(s)	1832
PmlI	CACGTG	1 cut(s)	1832
PpsI	GAGTC	3 cut(s)	26, 743, 1136
Ppu21I	YACGTR	1 cut(s)	1832
PshAI	GACNNNNGTC	1 cut(s)	781
Psp6I	CCWGG	4 cut(s)	1862, 1930, 1937, 1975
PspCI	CACGTG	1 cut(s)	1832
PspGI	CCWGG	4 cut(s)	1862, 1930, 1937, 1975
PspN4I	GGNNCC	5 cut(s)	1341, 1747, 1766, 1878, 1936
PspPI	GGNCC	2 cut(s)	30, 923
PstI	CTGCAG	1 cut(s)	553
PstNI	CAGNNNCTG	4 cut(s)	839, 1670, 1814, 2000
PsuI	RGATCY	1 cut(s)	1764
PsyI	GACNNNGTC	2 cut(s)	80, 891
PvuI	CGATCG	3 cut(s)	16, 28, 995
PvuII	CAGCTG	1 cut(s)	449
RsaI	GTAC	3 cut(s)	276, 1196, 1380
RsaNI	GTAC	3 cut(s)	275, 1195, 1379
RseI	CAYNNNNRTG	3 cut(s)	131, 1301, 1994
SalI	GTCGAC	1 cut(s)	20
SapI	GCTCTTC	1 cut(s)	179
Sau96I	GGNCC	2 cut(s)	30, 923
SchI	GAGTC	3 cut(s)	27, 743, 1137
ScrFI	CCNGG	4 cut(s)	1864, 1932, 1939, 1977
SduI	GDGCHC	2 cut(s)	705, 1879
SexAI	ACCWGGT	1 cut(s)	1930
SfaNI	GCATC	7 cut(s)	292, 433, 616, 652, 941, 1537, 1651
SfcI	CTRYAG	1 cut(s)	549
SfuI	TTCGAA	1 cut(s)	2047
SgrAI	CRCCGGYG	1 cut(s)	743
SinI	GGWCC	1 cut(s)	30
SmiMI	CAYNNNNRTG	3 cut(s)	131, 1301, 1994
SmlI	CTYRAG	3 cut(s)	95, 612, 1769
SmoI	CTYRAG	3 cut(s)	95, 612, 1769
SpeI	ACTAGT	1 cut(s)	433
SphI	GCATGC	1 cut(s)	1948
SseBI	AGGCCT	1 cut(s)	1912
SsiI	CCGC	6 cut(s)	583, 1228, 1473, 1806, 1957, 2066
SspI	AATATT	1 cut(s)	622
SspMI	CTAG	4 cut(s)	402, 434, 1680, 1872
StuI	AGGCCT	1 cut(s)	1912
StyD4I	CCNGG	4 cut(s)	1862, 1930, 1937, 1975
StyI	CCWWGG	2 cut(s)	807, 1343
TaaI	ACNGT	6 cut(s)	218, 512, 817, 1022, 1172, 1199
TaiI	ACGT	3 cut(s)	637, 740, 1834
TaqI	TCGA	6 cut(s)	12, 16, 21, 886, 995, 2047
TatI	WGTACW	3 cut(s)	274, 1194, 1378
TauI	GCSGC	3 cut(s)	586, 1475, 1808
TfiI	GAWTC	9 cut(s)	56, 221, 287, 350, 568, 1076, 1478, 1553, 1961
TscAI	CASTG	8 cut(s)	223, 925, 1138, 1188, 1204, 1864, 1955, 2001
TseFI	GTSAC	5 cut(s)	506, 746, 1129, 1172, 1758
Tsp45I	GTSAC	5 cut(s)	506, 746, 1129, 1172, 1758
TspGWI	ACGGA	4 cut(s)	647, 710, 1291, 1777
TspRI	CASTG	8 cut(s)	223, 925, 1138, 1188, 1204, 1864, 1955, 2001
Tth111I	GACNNNGTC	2 cut(s)	80, 891
Van91I	CCANNNNNTGG	2 cut(s)	1824, 2000
Vha464I	CTTAAG	2 cut(s)	95, 1769
VpaK11BI	GGWCC	1 cut(s)	30
XapI	RAATTY	3 cut(s)	802, 975, 1405
XbaI	TCTAGA	1 cut(s)	401
XceI	RCATGY	2 cut(s)	275, 1948
XmiI	GTMKAC	3 cut(s)	21, 1502, 1612
XmnI	GAANNNNTTC	1 cut(s)	975
XspI	CTAG	4 cut(s)	402, 434, 1680, 1872
Zsp2I	ATGCAT	1 cut(s)	1732

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.