Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0016297

Physical Location & Seq

Genomic Coordinates Forward (+)

3811910 .. 3814425

Gene Structure 2516 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1047400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGGATTTCGGCACCGTGAGAGATAAACTTCATGCAGAAATGTATGCAACCCTGCAACAATTCAAGCGTGATGTGCTGCTGATACCCAAAAATGCAATTCACTTTAACGCAGAAGCCACCATATATTACCAAGAGGCTCAAGGTATAAAAGATCTAGCCGACGAACTTTTCAGAACTCTGAGATGTGATCGACTACGTTTTCTGTTAAAATATTACTTCCATGAAATACTCTGCCCTCATGGAAATGGTGGAGATATACACTCAAAGTTTCTTGAACCAACTGGGAAGCCAAAGTTTCTTGAACCAACTGGCAAACCATGGCGCTTGTGTGGCTCATCCCTCAGAAGAGAAAAACAAGCAGATCCAAATCCTGGATTGAGAGATGGTAGGGACTCAAATTTAGCCGAAGCGCAGAGGCGTTACACTTATTGTACGCCTTCCAAAGAGAATGAATCTTTAATCTCAGCTGTCTACAATGCACCCAACAAATCACTTGTTCATATTGATGCTGGTTTAGGATACAAAGAAAGTCTCGTGCGCTTTGTTAAAAATTTGGGGCCAACAGCTCAAATGGTTGCTAAGAAGAAATTAGAAAGTCTAGTTGCAGCTCAGAATTGTCAGCCTCAGGCAACCCCTCCATTTCAGAACCAAAATTATCCTGCTTTCGCCCTATCTGCATCACCGGCACTTGGTCATCCTATTGGTGTTAATAGTTCTCAAATGACTCAAATGCAACATAATTCCCAGTATAACTTGCCAAAGGAAGTGAATGTTCCTTATTTTCTTGGTGATGCTTCTGCACAAGGATATGCCCCGGTTAGAGCCAGCCTATGCATCAATGAGGGTGCTTACAATAGAAACATGAATGCACCCGACACATCCAGAATAGACATGAAGGGTAATCTCATTGACCCGAAAGGGAAGGCACATGAGGAAGGATATACGTATAAAAAAGCTTTCCCGGAACGGATAGGTATTGATATAAACAAAATCATGGACTCCCCTAGTCTTACCAATGGTATAAGACTTCACAAGAGCAAAATGGAAGGCAGGCCTCATCAAAATCAGAACAGCAACGTTCAGTTGGAGTCGCACATTCGCGTTGTTAGAGATTTGGGTGGTCCTGAGACAAACAGCACAAAGTTTAGGACTGTGGATATGCTAGCAGAACGTAACAATGTAGGAAACCTGCAGCTGCTTCCGCAAGCTCGGATGTCTAGGACTGCATTGAATCAGTCGAGGCTGCAAGAGATCATGTCAAATACCAACACCTATCTCAGGACATCATCTTACTTGCCTTCACCCACTCCAGAGATGTCGAGTTTGATCCAGACAACAACTTCCTTCAATGGTTTCGACGCTCAACTGAGTAGCAACTATGCAGCTAACTCTTTTCATGCAGGTCAGCTTCCTCAAAAGAATAACTATATAGCTAACCCTACACAGGCAGGTCAGCTCATGCCTCAATTTAACAGTCCCAATGCGGCGCAAGGTGTGCAAGAAATGAGTAGCTTTCCGAGCATGAAACTGAAGCTTGGTGAGGATCATAGTGCATTGGCAAAGAGTGACATGTTTATGAGGAGAGAACAAGGGGTGGAGTCACTGGCGGTTCAGGGAATAGTGAAGCCTCCTCCCTTGTACAATGCATTTGGTAGCCATGAAAGAGCTTCAACTCAATGGTACCAAAAGGAGCCTACTCCTGAACATCTTCTGCCCTGGCTGGTGGACTCTCAGCAGCCTAACTTGTCTCTTCAGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

587

Amino Acids

65.57

Weight (kDa)

9.07

Isoelectric Point (pI)

44.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	1 - 47	9.6e-08	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016297)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g41110
malus_domestica	MD03G1047400.v1.1 MD11G1049900.v1.1
pyrus_communis	pycom11g04050
rosa_chinensis	RchiOBHm_Chr5g0073891
rosa_laevigata	RLG00000036422
rosa_multiflora	Rmu_co8433661.1_g000001 Rmu_sc0000470.1_g000015
rosa_roxburghii	Rroxscaffold_1G00007480
rosa_rugosa	Rorug05G0427100
rosa_samantha	Rh5AG484100 Rh5BG504800 Rh5CG528600 Rh5DG517100
rosa_wichuraiana	Rw5G045000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	1197, 1391, 1439
Acc65I	GGTACC	1 cut(s)	1680
AccB1I	GGYRCC	2 cut(s)	11, 1680
AccB7I	CCANNNNNTGG	1 cut(s)	371
AccI	GTMKAC	1 cut(s)	471
AccII	CGCG	1 cut(s)	1101
AciI	CCGC	3 cut(s)	1202, 1484, 1607
AclI	AACGTT	1 cut(s)	1077
AclWI	GGATC	3 cut(s)	356, 1321, 1551
AcsI	RAATTY	2 cut(s)	397, 550
AcuI	CTGAAG	2 cut(s)	1550, 1736
AfaI	GTAC	3 cut(s)	433, 1640, 1682
AfiI	CCNNNNNNNGG	4 cut(s)	371, 689, 1278, 1444
AflIII	ACRYGT	1 cut(s)	1569
AgsI	TTSAA	6 cut(s)	64, 275, 302, 1231, 1348, 1671
AjnI	CCWGG	2 cut(s)	370, 1715
Alw26I	GTCTC	3 cut(s)	536, 1121, 1752
AlwI	GGATC	3 cut(s)	356, 1321, 1551
AoxI	GGCC	2 cut(s)	557, 1052
ApeKI	GCWGC	7 cut(s)	76, 605, 1192, 1195, 1243, 1382, 1735
ApoI	RAATTY	2 cut(s)	397, 550
Asp700I	GAANNNNTTC	1 cut(s)	1707
Asp718I	GGTACC	1 cut(s)	1680
AspLEI	GCGC	4 cut(s)	324, 412, 540, 1489
AspS9I	GGNCC	2 cut(s)	557, 1121
AsuC2I	CCSGG	2 cut(s)	815, 962
AsuHPI	GGTGA	4 cut(s)	672, 800, 1293, 1550
AsuNHI	GCTAGC	1 cut(s)	1162
AvaII	GGWCC	1 cut(s)	1121
AxyI	CCTNAGG	1 cut(s)	624
BanI	GGYRCC	2 cut(s)	11, 1680
BauI	CACGAG	1 cut(s)	533
BbvI	GCAGC	7 cut(s)	63, 617, 1182, 1204, 1230, 1394, 1747
BccI	CCATC	1 cut(s)	377
BciT130I	CCWGG	2 cut(s)	372, 1717
BciVI	GTATCC	1 cut(s)	512
BcnI	CCSGG	2 cut(s)	815, 962
BcoDI	GTCTC	3 cut(s)	536, 1121, 1752
BfaI	CTAG	5 cut(s)	155, 599, 1005, 1163, 1218
BfmI	CTRYAG	1 cut(s)	1190
BfoI	RGCGCY	1 cut(s)	325
BfuAI	ACCTGC	3 cut(s)	1197, 1391, 1439
BfuI	GTATCC	1 cut(s)	512
BglII	AGATCT	1 cut(s)	151
BisI	GCNGC	8 cut(s)	77, 606, 1193, 1196, 1244, 1383, 1485, 1736
BlsI	GCNGC	8 cut(s)	78, 607, 1194, 1197, 1245, 1384, 1486, 1737
Bme1390I	CCNGG	4 cut(s)	372, 815, 962, 1717
Bme18I	GGWCC	1 cut(s)	1121
BmgT120I	GGNCC	2 cut(s)	557, 1121
BmiI	GGNNCC	4 cut(s)	13, 558, 1682, 1692
BmrFI	CCNGG	4 cut(s)	372, 815, 962, 1717
BmrI	ACTGGG	2 cut(s)	291, 739
BmsI	GCATC	4 cut(s)	496, 686, 781, 843
BmtI	GCTAGC	1 cut(s)	1166
BmuI	ACTGGG	2 cut(s)	291, 739
BpmI	CTGGAG	1 cut(s)	1293
BpuEI	CTTGAG	1 cut(s)	123
BpuMI	CCSGG	2 cut(s)	815, 962
BsaAI	YACGTR	1 cut(s)	945
BsaBI	GATNNNNATC	1 cut(s)	366
BsaJI	CCNNGG	3 cut(s)	317, 813, 1715
Bsc4I	CCNNNNNNNGG	4 cut(s)	371, 689, 1278, 1444
Bse118I	RCCGGY	1 cut(s)	682
Bse1I	ACTGG	4 cut(s)	286, 313, 745, 1608
Bse21I	CCTNAGG	1 cut(s)	624
Bse8I	GATNNNNATC	1 cut(s)	366
BseBI	CCWGG	2 cut(s)	372, 1717
BseDI	CCNNGG	3 cut(s)	317, 813, 1715
BseGI	GGATG	4 cut(s)	335, 694, 878, 1218
BseJI	GATNNNNATC	1 cut(s)	366
BseLI	CCNNNNNNNGG	4 cut(s)	371, 689, 1278, 1444
BseMII	CTCAG	9 cut(s)	170, 355, 477, 623, 638, 1116, 1291, 1358, 1745
BseNI	ACTGG	4 cut(s)	286, 313, 745, 1608
BseRI	GAGGAG	2 cut(s)	1594, 1620
BseXI	GCAGC	7 cut(s)	63, 617, 1182, 1204, 1230, 1394, 1747
BsgI	GTGCAG	1 cut(s)	783
Bsh1236I	CGCG	1 cut(s)	1101
BshFI	GGCC	2 cut(s)	559, 1054
BshNI	GGYRCC	2 cut(s)	11, 1680
BsiSI	CCGG	3 cut(s)	683, 815, 962
BslFI	GGGAC	2 cut(s)	404, 1461
BslI	CCNNNNNNNGG	4 cut(s)	371, 689, 1278, 1444
BsmAI	GTCTC	3 cut(s)	536, 1121, 1752
BsmFI	GGGAC	2 cut(s)	404, 1461
BsmI	GAATGC	1 cut(s)	871
BsnI	GGCC	2 cut(s)	559, 1054
Bsp1407I	TGTACA	1 cut(s)	1638
Bsp143I	GATC	6 cut(s)	151, 187, 361, 1251, 1326, 1543
Bsp19I	CCATGG	1 cut(s)	317
BspACI	CCGC	3 cut(s)	1202, 1484, 1607
BspANI	GGCC	2 cut(s)	559, 1054
BspCNI	CTCAG	9 cut(s)	171, 354, 476, 622, 637, 1117, 1290, 1359, 1744
BspFNI	CGCG	1 cut(s)	1101
BspLI	GGNNCC	4 cut(s)	13, 558, 1682, 1692
BspMAI	CTGCAG	1 cut(s)	1194
BspMI	ACCTGC	3 cut(s)	1197, 1391, 1439
BspOI	GCTAGC	1 cut(s)	1166
BspPI	GGATC	3 cut(s)	356, 1321, 1551
BspT107I	GGYRCC	2 cut(s)	11, 1680
BsrFI	RCCGGY	1 cut(s)	682
BsrGI	TGTACA	1 cut(s)	1638
BsrI	ACTGG	4 cut(s)	286, 313, 745, 1608
BssAI	RCCGGY	1 cut(s)	682
BssECI	CCNNGG	3 cut(s)	317, 813, 1715
BssMI	GATC	6 cut(s)	151, 187, 361, 1251, 1326, 1543
BssSI	CACGAG	1 cut(s)	533
BssT1I	CCWWGG	1 cut(s)	317
Bst2BI	CACGAG	1 cut(s)	533
Bst2UI	CCWGG	2 cut(s)	372, 1717
Bst4CI	ACNGT	3 cut(s)	16, 1153, 1475
Bst6I	CTCTTC	2 cut(s)	340, 1755
BstAPI	GCANNNNNTGC	1 cut(s)	1495
BstAUI	TGTACA	1 cut(s)	1638
BstBAI	YACGTR	1 cut(s)	945
BstC8I	GCNNGC	4 cut(s)	826, 1052, 1164, 1206
BstDSI	CCRYGG	1 cut(s)	317
BstENI	CCTNNNNNAGG	1 cut(s)	1276
BstF5I	GGATG	4 cut(s)	335, 694, 878, 1218
BstFNI	CGCG	1 cut(s)	1101
BstH2I	RGCGCY	1 cut(s)	325
BstHHI	GCGC	4 cut(s)	324, 412, 540, 1489
BstKTI	GATC	6 cut(s)	154, 190, 364, 1254, 1329, 1546
BstMAI	GTCTC	3 cut(s)	536, 1121, 1752
BstMBI	GATC	6 cut(s)	151, 187, 361, 1251, 1326, 1543
BstMWI	GCNNNNNNNGC	7 cut(s)	73, 330, 674, 683, 1201, 1495, 1518
BstNI	CCWGG	2 cut(s)	372, 1717
BstNSI	RCATGY	1 cut(s)	1573
BstSCI	CCNGG	4 cut(s)	370, 813, 960, 1715
BstSFI	CTRYAG	1 cut(s)	1190
BstSNI	TACGTA	1 cut(s)	945
BstUI	CGCG	1 cut(s)	1101
BstV1I	GCAGC	7 cut(s)	63, 617, 1182, 1204, 1230, 1394, 1747
BstX2I	RGATCY	2 cut(s)	151, 361
BstYI	RGATCY	2 cut(s)	151, 361
Bsu36I	CCTNAGG	1 cut(s)	624
BsuI	GTATCC	1 cut(s)	512
BsuRI	GGCC	2 cut(s)	559, 1054
BtgI	CCRYGG	1 cut(s)	317
BtsCI	GGATG	4 cut(s)	335, 694, 878, 1218
BtsIMutI	CAGTG	1 cut(s)	1601
BveI	ACCTGC	3 cut(s)	1197, 1391, 1439
Cac8I	GCNNGC	4 cut(s)	826, 1052, 1164, 1206
CfoI	GCGC	4 cut(s)	324, 412, 540, 1489
Cfr10I	RCCGGY	1 cut(s)	682
Cfr13I	GGNCC	2 cut(s)	557, 1121
CseI	GACGC	1 cut(s)	1367
Csp6I	GTAC	3 cut(s)	432, 1639, 1681
CviQI	GTAC	3 cut(s)	432, 1639, 1681
DpnI	GATC	6 cut(s)	153, 189, 363, 1253, 1328, 1545
DpnII	GATC	6 cut(s)	151, 187, 361, 1251, 1326, 1543
Eam1104I	CTCTTC	2 cut(s)	340, 1755
EarI	CTCTTC	2 cut(s)	340, 1755
Eco105I	TACGTA	1 cut(s)	945
Eco130I	CCWWGG	1 cut(s)	317
Eco147I	AGGCCT	1 cut(s)	1054
Eco47I	GGWCC	1 cut(s)	1121
Eco57I	CTGAAG	2 cut(s)	1550, 1736
Eco81I	CCTNAGG	1 cut(s)	624
EcoNI	CCTNNNNNAGG	1 cut(s)	1276
EcoRII	CCWGG	2 cut(s)	370, 1715
EcoT14I	CCWWGG	1 cut(s)	317
EcoT22I	ATGCAT	2 cut(s)	836, 1648
ErhI	CCWWGG	1 cut(s)	317
FaqI	GGGAC	2 cut(s)	404, 1461
FblI	GTMKAC	1 cut(s)	471
Fnu4HI	GCNGC	8 cut(s)	77, 606, 1193, 1196, 1244, 1383, 1485, 1736
FokI	GGATG	4 cut(s)	322, 681, 865, 1225
Fsp4HI	GCNGC	8 cut(s)	77, 606, 1193, 1196, 1244, 1383, 1485, 1736
FspBI	CTAG	5 cut(s)	155, 599, 1005, 1163, 1218
GlaI	GCGC	4 cut(s)	323, 411, 539, 1488
GluI	GCNGC	8 cut(s)	77, 606, 1193, 1196, 1244, 1383, 1485, 1736
GsuI	CTGGAG	1 cut(s)	1293
HaeII	RGCGCY	1 cut(s)	325
HaeIII	GGCC	2 cut(s)	559, 1054
HapII	CCGG	3 cut(s)	683, 815, 962
HgaI	GACGC	1 cut(s)	1367
HhaI	GCGC	4 cut(s)	324, 412, 540, 1489
Hin6I	GCGC	4 cut(s)	322, 410, 538, 1487
HinP1I	GCGC	4 cut(s)	322, 410, 538, 1487
HindIII	AAGCTT	2 cut(s)	954, 1532
HinfI	GANTC	8 cut(s)	392, 452, 724, 998, 1088, 1231, 1598, 1727
HpaII	CCGG	3 cut(s)	683, 815, 962
HphI	GGTGA	4 cut(s)	672, 800, 1293, 1550
Hpy166II	GTNNAC	2 cut(s)	472, 1726
Hpy188I	TCNGA	8 cut(s)	173, 180, 344, 612, 645, 1068, 1212, 1518
Hpy188III	TCNNGA	8 cut(s)	272, 299, 882, 1124, 1279, 1310, 1330, 1700
Hpy8I	GTNNAC	2 cut(s)	472, 1726
Hpy99I	CGWCG	2 cut(s)	164, 1361
HpyAV	CCTTC	7 cut(s)	447, 889, 916, 929, 1040, 1308, 1354
HpyCH4III	ACNGT	3 cut(s)	16, 1153, 1475
HpyCH4IV	ACGT	4 cut(s)	196, 944, 1077, 1171
HpyF10VI	GCNNNNNNNGC	7 cut(s)	73, 330, 674, 683, 1201, 1495, 1518
HpySE526I	ACGT	4 cut(s)	196, 944, 1077, 1171
HspAI	GCGC	4 cut(s)	322, 410, 538, 1487
KpnI	GGTACC	1 cut(s)	1684
Kzo9I	GATC	6 cut(s)	151, 187, 361, 1251, 1326, 1543
LmnI	GCTCC	1 cut(s)	1690
Lsp1109I	GCAGC	7 cut(s)	63, 617, 1182, 1204, 1230, 1394, 1747
LweI	GCATC	4 cut(s)	496, 686, 781, 843
MaeI	CTAG	5 cut(s)	155, 599, 1005, 1163, 1218
MaeII	ACGT	4 cut(s)	196, 944, 1077, 1171
MaeIII	GTNAC	4 cut(s)	419, 1172, 1565, 1599
MalI	GATC	6 cut(s)	153, 189, 363, 1253, 1328, 1545
MboI	GATC	6 cut(s)	151, 187, 361, 1251, 1326, 1543
MboII	GAAGA	4 cut(s)	357, 595, 1700, 1742
MflI	RGATCY	2 cut(s)	151, 361
MluCI	AATT	9 cut(s)	59, 96, 397, 550, 587, 613, 652, 739, 1466
MlyI	GAGTC	6 cut(s)	386, 718, 992, 1097, 1607, 1721
MmeI	TCCRAC	1 cut(s)	1065
Mph1103I	ATGCAT	2 cut(s)	836, 1648
MroXI	GAANNNNTTC	1 cut(s)	1707
MseI	TTAA	6 cut(s)	105, 206, 458, 546, 708, 1470
MslI	CAYNNNNRTG	3 cut(s)	243, 504, 1574
MspA1I	CMGCKG	3 cut(s)	467, 1195, 1756
MspI	CCGG	3 cut(s)	683, 815, 962
MspR9I	CCNGG	4 cut(s)	372, 815, 962, 1717
Mva1269I	GAATGC	1 cut(s)	871
MvaI	CCWGG	2 cut(s)	372, 1717
MvnI	CGCG	1 cut(s)	1101
MwoI	GCNNNNNNNGC	7 cut(s)	73, 330, 674, 683, 1201, 1495, 1518
NciI	CCSGG	2 cut(s)	815, 962
NcoI	CCATGG	1 cut(s)	317
NdeII	GATC	6 cut(s)	151, 187, 361, 1251, 1326, 1543
NheI	GCTAGC	1 cut(s)	1162
NlaIV	GGNNCC	4 cut(s)	13, 558, 1682, 1692
NmuCI	GTSAC	2 cut(s)	1565, 1599
NsiI	ATGCAT	2 cut(s)	836, 1648
NspI	RCATGY	1 cut(s)	1573
PceI	AGGCCT	1 cut(s)	1054
PciI	ACATGT	1 cut(s)	1569
PctI	GAATGC	1 cut(s)	871
PdmI	GAANNNNTTC	1 cut(s)	1707
PfeI	GAWTC	2 cut(s)	452, 1231
PflMI	CCANNNNNTGG	1 cut(s)	371
PfoI	TCCNGGA	2 cut(s)	370, 960
PkrI	GCNGC	8 cut(s)	78, 607, 1194, 1197, 1245, 1384, 1486, 1737
PleI	GAGTC	6 cut(s)	386, 718, 992, 1096, 1606, 1721
PpsI	GAGTC	6 cut(s)	386, 718, 992, 1096, 1606, 1721
Ppu21I	YACGTR	1 cut(s)	945
PscI	ACATGT	1 cut(s)	1569
Psp1406I	AACGTT	1 cut(s)	1077
Psp6I	CCWGG	2 cut(s)	370, 1715
PspGI	CCWGG	2 cut(s)	370, 1715
PspN4I	GGNNCC	4 cut(s)	13, 558, 1682, 1692
PspPI	GGNCC	2 cut(s)	557, 1121
PstI	CTGCAG	1 cut(s)	1194
PsuI	RGATCY	2 cut(s)	151, 361
PvuII	CAGCTG	3 cut(s)	467, 1195, 1756
RsaI	GTAC	3 cut(s)	433, 1640, 1682
RsaNI	GTAC	3 cut(s)	432, 1639, 1681
RseI	CAYNNNNRTG	3 cut(s)	243, 504, 1574
SaqAI	TTAA	6 cut(s)	105, 206, 458, 546, 708, 1470
SatI	GCNGC	8 cut(s)	77, 606, 1193, 1196, 1244, 1383, 1485, 1736
Sau3AI	GATC	6 cut(s)	151, 187, 361, 1251, 1326, 1543
Sau96I	GGNCC	2 cut(s)	557, 1121
SchI	GAGTC	6 cut(s)	386, 718, 992, 1097, 1607, 1721
ScrFI	CCNGG	4 cut(s)	372, 815, 962, 1717
SfaNI	GCATC	4 cut(s)	496, 686, 781, 843
SfcI	CTRYAG	1 cut(s)	1190
SinI	GGWCC	1 cut(s)	1121
SmiMI	CAYNNNNRTG	3 cut(s)	243, 504, 1574
SmlI	CTYRAG	1 cut(s)	138
SmoI	CTYRAG	1 cut(s)	138
SnaBI	TACGTA	1 cut(s)	945
Sse9I	AATT	9 cut(s)	59, 96, 397, 550, 587, 613, 652, 739, 1466
SseBI	AGGCCT	1 cut(s)	1054
SsiI	CCGC	3 cut(s)	1202, 1484, 1607
SspI	AATATT	1 cut(s)	212
SspMI	CTAG	5 cut(s)	155, 599, 1005, 1163, 1218
StuI	AGGCCT	1 cut(s)	1054
StyD4I	CCNGG	4 cut(s)	370, 813, 960, 1715
StyI	CCWWGG	1 cut(s)	317
TaaI	ACNGT	3 cut(s)	16, 1153, 1475
TaiI	ACGT	4 cut(s)	199, 947, 1080, 1174
TaqI	TCGA	4 cut(s)	190, 1238, 1319, 1356
TasI	AATT	9 cut(s)	59, 96, 397, 550, 587, 613, 652, 739, 1466
TatI	WGTACW	1 cut(s)	1638
TauI	GCSGC	1 cut(s)	1487
TfiI	GAWTC	2 cut(s)	452, 1231
Tru1I	TTAA	6 cut(s)	105, 206, 458, 546, 708, 1470
Tru9I	TTAA	6 cut(s)	105, 206, 458, 546, 708, 1470
TscAI	CASTG	1 cut(s)	1608
TseFI	GTSAC	2 cut(s)	1565, 1599
TseI	GCWGC	7 cut(s)	76, 605, 1192, 1195, 1243, 1382, 1735
Tsp45I	GTSAC	2 cut(s)	1565, 1599
TspDTI	ATGAA	9 cut(s)	20, 237, 465, 488, 878, 908, 1385, 1538, 1674
TspGWI	ACGGA	1 cut(s)	982
TspRI	CASTG	1 cut(s)	1608
Van91I	CCANNNNNTGG	1 cut(s)	371
VpaK11BI	GGWCC	1 cut(s)	1121
XagI	CCTNNNNNAGG	1 cut(s)	1276
XapI	RAATTY	2 cut(s)	397, 550
XceI	RCATGY	1 cut(s)	1573
XmiI	GTMKAC	1 cut(s)	471
XmnI	GAANNNNTTC	1 cut(s)	1707
XspI	CTAG	5 cut(s)	155, 599, 1005, 1163, 1218
Zsp2I	ATGCAT	2 cut(s)	836, 1648

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.