Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0016297

Physical Location & Seq

Genomic Coordinates Forward (+)

3172368 .. 3175832

Gene Structure 3465 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g04050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2049 bp

ATGGAAATATGGGAGGGAAGTGAACTAGTTGAAGGGAGAAGGAAGAGTGCCCGAATATCGGCATTGAAGGAGGCTAAGAAGAACAAACAAATCCCCAAATCCAAAACTAATGTCGGTAGCGAGAACGGTAAGACACCTGTTGCAGCAAAAGCAGCAGCTTCTGGTTCCAAGAGGGGCCGAAAGCGCAAAAAACTTGAAGATGTAGTTCTATCTTCTCAACAGTTCAAGATTTCCGAATGCAGTAATGTAGTTATTGTTCATGTTGCAGATCAACTGTTATCTACGCCAGTGGCGGTGAAACAAGTATGCGAGTACATCCTTAATACGTTACAAAGGGATACACTTGATGTATTTGCTCAGCCTGTTGACCCTAAAAAGGTAATAACCTATTACACAACCATAAAAAAGCCAATGGATTTTGGCACCCTTAGAGATAAACTTCATGCAGAAATGTATGCAACCCTGCAACAATTCAAGCGTGATGTGCTGCTGATACCCAAAAATGCAATTCACTTCAACGGAAAAGCCACCATATATTACCAAGAGGCTCAAGGTATAAAAGATCTTGCCAACGAACTTTTCAGAACTCTGAGATATGATCGAAGGCGTTTTCTGTTAAAATATTACTTCCATGAAATACTCTGCCCTGATGGGAATGGTGGAGATATACACTCAAAGTTTCTTGAACCAACTGGGAAGCCAAAGTTTTTTGAACCAACTGGCAAACCACAGCGCTTGTGTGGCTCATCTCTCAGAAGAGAAAAACAAGCTGATCCAAATCCTGGTAATTATTGCAATGGCCTAGAGACTATTGATGCTGGTTTCGGATACAAAGAAAGTCTCATACGGTTCATTAAAAATTTGGGGCCAACAGCTCAAATGGTTGCTAAGAAGAAATTAGAAAGTCTACTTGCAGCTCAGCATTGCCAGCCCCAGGCAACCCCTCCAATTCAGAACCAAAATTATCCGGCTTTCGCCCTATCTGCATCACCAGCACTTGGTCATCCTATTGGTGTTAATAGTTCTCAAATGGCTCATATGCAACATAATTCCCTGGATAATTTGCCAAGGGATGTGAATGCTTCTTATTTCCATGGCGATGCTTCTGCACAAGGATATGCCCCGGTTAGAGCCAGTGTATGCATCAATGAGGGTGCTTACAAGGGAAAGATGAATGCAGCCGACACATCCAGATTAGGCATGGAGGGTAATGTCATTGACCCGAAAGGGAAAGCACCCGAGGAACAAGATACTTCTGACAAAACTTTCCCGAAACGGATGGCTATTGACATAAACAAAACCATGGACTTCACCAGTCTTCCCAATGGCATAAGACTTCACGGGAGCAACATTGAAGGCAGGCCTCATCAATATCAGAACGGAAACGTTCAGTTGGGGTCGCACATTTGCGTTGTTAGAGATTTGGGTGGTCCTGGGACAAACAGCATAAAGTTTAGGACTGTGGATATGCTAGCAGAACGTAACAATGTAGGAAACCTGCTGCAGCAGCTTCCGCAAGCTCCGATGTCTAGGACTGCATCAAATCAGTCGAGGCTGCAAGAGATCACGTCGAAAACTAACACCTATCTGAGGCCTTCACCCGCTCCTGAGCTGTCGAGTTTGATCCAGGCAACAACTTGCTTCAATGGTTCCGACACGCAACTCAATAGAAACTATGCAGCTAACTCTTTTCGTGCAGGTCAGCTTCCTCAAATGAATAACTATATAGCTAACCCTGCACAGGCAGGTCAGCTCAAGCCTCATCCCAATGCGGCGCAAGGTGTGCAAGAAATGAGTAGCTTTCCGAGCATGAAACTGAAGCTTGGTGAGGATCATAGTGCAATGGCAAAGGGTGGCATGTATATGAGGAGAGAACAAGGGGAGGTGTCGCTGGCGGCTCGGGGAATGATGAAGCCTCCTCCCTTGTACAATGCATTTGGTAGCCATGAAAGAGCTTCTACTCAATGGTACCAAAGGGAGCCTACTACTGAATCTTTTCTGCCCTGGCAGGTGGATTCTCATCAGCCTAACTTGGCTCTTCAGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

683

Amino Acids

75.6

Weight (kDa)

9.47

Isoelectric Point (pI)

39.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	108 - 184	4.8e-17	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0016297)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g41110
malus_domestica	MD03G1047400.v1.1 MD11G1049900.v1.1
pyrus_communis	pycom11g04050
rosa_chinensis	RchiOBHm_Chr5g0073891
rosa_laevigata	RLG00000036422
rosa_multiflora	Rmu_co8433661.1_g000001 Rmu_sc0000470.1_g000015
rosa_roxburghii	Rroxscaffold_1G00007480
rosa_rugosa	Rorug05G0427100
rosa_samantha	Rh5AG484100 Rh5BG504800 Rh5CG528600 Rh5DG517100
rosa_wichuraiana	Rw5G045000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1999
Acc36I	ACCTGC	4 cut(s)	1506, 1688, 1736, 1999
Acc65I	GGTACC	1 cut(s)	1968
AccB1I	GGYRCC	2 cut(s)	422, 1968
AccB7I	CCANNNNNTGG	2 cut(s)	782, 998
AccBSI	CCGCTC	1 cut(s)	1604
AccI	GTMKAC	1 cut(s)	907
AciI	CCGC	5 cut(s)	293, 1514, 1602, 1772, 1895
AclI	AACGTT	1 cut(s)	1386
AclWI	GGATC	3 cut(s)	767, 1618, 1839
AcsI	RAATTY	1 cut(s)	859
AcuI	CTGAAG	2 cut(s)	1838, 2024
AfaI	GTAC	3 cut(s)	314, 1928, 1970
AfeI	AGCGCT	1 cut(s)	734
AfiI	CCNNNNNNNGG	7 cut(s)	58, 376, 782, 934, 998, 1590, 1741
AhlI	ACTAGT	1 cut(s)	25
AjiI	CACGTC	1 cut(s)	1569
AjnI	CCWGG	6 cut(s)	781, 933, 1053, 1432, 1626, 2003
AjuI	GAANNNNNNNTTGG	2 cut(s)	563, 595
Alw26I	GTCTC	2 cut(s)	800, 845
AlwI	GGATC	3 cut(s)	767, 1618, 1839
AlwNI	CAGNNNCTG	1 cut(s)	161
Ama87I	CYCGRG	2 cut(s)	1238, 1899
Aor51HI	AGCGCT	1 cut(s)	734
AoxI	GGCC	5 cut(s)	175, 799, 866, 1361, 1592
ApoI	RAATTY	1 cut(s)	859
ArsI	GACNNNNNNTTYG	2 cut(s)	96, 128
Asp700I	GAANNNNTTC	1 cut(s)	1995
Asp718I	GGTACC	1 cut(s)	1968
AspLEI	GCGC	3 cut(s)	186, 735, 1777
AspS9I	GGNCC	3 cut(s)	175, 866, 1430
AsuC2I	CCSGG	1 cut(s)	1124
AsuHPI	GGTGA	5 cut(s)	307, 981, 1303, 1590, 1838
AsuNHI	GCTAGC	1 cut(s)	1471
AvaI	CYCGRG	2 cut(s)	1238, 1899
AvaII	GGWCC	1 cut(s)	1430
BaeGI	GKGCMC	1 cut(s)	52
BanI	GGYRCC	2 cut(s)	422, 1968
BbsI	GAAGAC	1 cut(s)	1310
BccI	CCATC	2 cut(s)	644, 1273
BcgI	CGANNNNNNTGC	2 cut(s)	1088, 1122
BciT130I	CCWGG	6 cut(s)	783, 935, 1055, 1434, 1628, 2005
BciVI	GTATCC	2 cut(s)	331, 821
BcnI	CCSGG	1 cut(s)	1124
BcoDI	GTCTC	2 cut(s)	800, 845
BcuI	ACTAGT	1 cut(s)	25
BfaI	CTAG	4 cut(s)	26, 803, 1472, 1530
BfmI	CTRYAG	1 cut(s)	1502
BfoI	RGCGCY	1 cut(s)	736
BfuAI	ACCTGC	4 cut(s)	1506, 1688, 1736, 1999
BfuI	GTATCC	2 cut(s)	331, 821
BglII	AGATCT	1 cut(s)	562
BlpI	GCTNAGC	2 cut(s)	357, 918
Bme1390I	CCNGG	7 cut(s)	783, 935, 1055, 1124, 1434, 1628, 2005
Bme18I	GGWCC	1 cut(s)	1430
BmeT110I	CYCGRG	2 cut(s)	1238, 1899
BmgBI	CACGTC	1 cut(s)	1569
BmgT120I	GGNCC	3 cut(s)	175, 866, 1430
BmiI	GGNNCC	7 cut(s)	166, 176, 424, 867, 1651, 1970, 1980
BmrFI	CCNGG	7 cut(s)	783, 935, 1055, 1124, 1434, 1628, 2005
BmrI	ACTGGG	1 cut(s)	702
BmsI	GCATC	5 cut(s)	805, 995, 1090, 1152, 1547
BmtI	GCTAGC	1 cut(s)	1475
BmuI	ACTGGG	1 cut(s)	702
BpiI	GAAGAC	1 cut(s)	1310
Bpu10I	CCTNAGC	1 cut(s)	1608
Bpu1102I	GCTNAGC	2 cut(s)	357, 918
BpuEI	CTTGAG	2 cut(s)	534, 1739
BpuMI	CCSGG	1 cut(s)	1124
BsaBI	GATNNNNATC	2 cut(s)	777, 2019
BsaJI	CCNNGG	9 cut(s)	933, 1053, 1067, 1093, 1122, 1239, 1302, 1433, 2003
Bsc4I	CCNNNNNNNGG	7 cut(s)	58, 376, 782, 934, 998, 1590, 1741
Bse1I	ACTGG	5 cut(s)	287, 697, 724, 1134, 1314
Bse3DI	GCAATG	3 cut(s)	802, 922, 1848
Bse8I	GATNNNNATC	2 cut(s)	777, 2019
BseBI	CCWGG	6 cut(s)	783, 935, 1055, 1434, 1628, 2005
BseDI	CCNNGG	9 cut(s)	933, 1053, 1067, 1093, 1122, 1239, 1302, 1433, 2003
BseGI	GGATG	6 cut(s)	315, 1003, 1078, 1187, 1284, 1762
BseJI	GATNNNNATC	2 cut(s)	777, 2019
BseLI	CCNNNNNNNGG	7 cut(s)	58, 376, 782, 934, 998, 1590, 1741
BseMI	GCAATG	3 cut(s)	802, 922, 1848
BseMII	CTCAG	6 cut(s)	371, 581, 766, 932, 1580, 1599
BseNI	ACTGG	5 cut(s)	287, 697, 724, 1134, 1314
BseRI	GAGGAG	2 cut(s)	1882, 1908
BseSI	GKGCMC	1 cut(s)	52
BsgI	GTGCAG	3 cut(s)	1092, 1716, 1722
BshFI	GGCC	5 cut(s)	177, 801, 868, 1363, 1594
BshNI	GGYRCC	2 cut(s)	422, 1968
BsiHKCI	CYCGRG	2 cut(s)	1238, 1899
BsiSI	CCGG	2 cut(s)	968, 1124
BslFI	GGGAC	1 cut(s)	1450
BslI	CCNNNNNNNGG	7 cut(s)	58, 376, 782, 934, 998, 1590, 1741
BsmAI	GTCTC	2 cut(s)	800, 845
BsmFI	GGGAC	1 cut(s)	1450
BsmI	GAATGC	3 cut(s)	242, 1084, 1180
BsnI	GGCC	5 cut(s)	177, 801, 868, 1363, 1594
BsoBI	CYCGRG	2 cut(s)	1238, 1899
Bsp1286I	GDGCHC	1 cut(s)	52
Bsp1407I	TGTACA	1 cut(s)	1926
Bsp143I	GATC	7 cut(s)	268, 562, 598, 772, 1563, 1623, 1831
Bsp1720I	GCTNAGC	2 cut(s)	357, 918
Bsp19I	CCATGG	2 cut(s)	1093, 1302
BspACI	CCGC	5 cut(s)	293, 1514, 1602, 1772, 1895
BspANI	GGCC	5 cut(s)	177, 801, 868, 1363, 1594
BspCNI	CTCAG	6 cut(s)	370, 582, 765, 931, 1581, 1600
BspLI	GGNNCC	7 cut(s)	166, 176, 424, 867, 1651, 1970, 1980
BspMAI	CTGCAG	1 cut(s)	1506
BspMI	ACCTGC	4 cut(s)	1506, 1688, 1736, 1999
BspOI	GCTAGC	1 cut(s)	1475
BspPI	GGATC	3 cut(s)	767, 1618, 1839
BspQI	GCTCTTC	1 cut(s)	2043
BspT107I	GGYRCC	2 cut(s)	422, 1968
BsrBI	CCGCTC	1 cut(s)	1604
BsrDI	GCAATG	3 cut(s)	802, 922, 1848
BsrGI	TGTACA	1 cut(s)	1926
BsrI	ACTGG	5 cut(s)	287, 697, 724, 1134, 1314
BssECI	CCNNGG	9 cut(s)	933, 1053, 1067, 1093, 1122, 1239, 1302, 1433, 2003
BssMI	GATC	7 cut(s)	268, 562, 598, 772, 1563, 1623, 1831
BssT1I	CCWWGG	3 cut(s)	1067, 1093, 1302
Bst2UI	CCWGG	6 cut(s)	783, 935, 1055, 1434, 1628, 2005
Bst4CI	ACNGT	5 cut(s)	128, 222, 276, 849, 1462
Bst6I	CTCTTC	3 cut(s)	38, 751, 2043
BstAPI	GCANNNNNTGC	1 cut(s)	1783
BstAUI	TGTACA	1 cut(s)	1926
BstC8I	GCNNGC	5 cut(s)	929, 1361, 1473, 1518, 1893
BstDEI	CTNAG	9 cut(s)	75, 357, 428, 590, 752, 888, 918, 1589, 1608
BstDSI	CCRYGG	2 cut(s)	1093, 1302
BstENI	CCTNNNNNAGG	1 cut(s)	1588
BstF5I	GGATG	6 cut(s)	315, 1003, 1078, 1187, 1284, 1762
BstH2I	RGCGCY	1 cut(s)	736
BstHHI	GCGC	3 cut(s)	186, 735, 1777
BstKTI	GATC	7 cut(s)	271, 565, 601, 775, 1566, 1626, 1834
BstMAI	GTCTC	2 cut(s)	800, 845
BstMBI	GATC	7 cut(s)	268, 562, 598, 772, 1563, 1623, 1831
BstNI	CCWGG	6 cut(s)	783, 935, 1055, 1434, 1628, 2005
BstNSI	RCATGY	1 cut(s)	1861
BstSCI	CCNGG	7 cut(s)	781, 933, 1053, 1122, 1432, 1626, 2003
BstSFI	CTRYAG	1 cut(s)	1502
BstSLI	GKGCMC	1 cut(s)	52
BstV2I	GAAGAC	1 cut(s)	1310
BstX2I	RGATCY	1 cut(s)	562
BstYI	RGATCY	1 cut(s)	562
BsuI	GTATCC	2 cut(s)	331, 821
BsuRI	GGCC	5 cut(s)	177, 801, 868, 1363, 1594
BtgI	CCRYGG	2 cut(s)	1093, 1302
BtgZI	GCGATG	1 cut(s)	1113
BtrI	CACGTC	1 cut(s)	1569
BtsCI	GGATG	6 cut(s)	315, 1003, 1078, 1187, 1284, 1762
BtsIMutI	CAGTG	2 cut(s)	294, 1141
BveI	ACCTGC	4 cut(s)	1506, 1688, 1736, 1999
Cac8I	GCNNGC	5 cut(s)	929, 1361, 1473, 1518, 1893
CaiI	CAGNNNCTG	1 cut(s)	161
CfoI	GCGC	3 cut(s)	186, 735, 1777
Cfr13I	GGNCC	3 cut(s)	175, 866, 1430
Csp6I	GTAC	3 cut(s)	313, 1927, 1969
CspCI	CAANNNNNGTGG	2 cut(s)	717, 752
CviAII	CATG	9 cut(s)	260, 443, 632, 1094, 1201, 1303, 1810, 1858, 1946
CviQI	GTAC	3 cut(s)	313, 1927, 1969
DdeI	CTNAG	9 cut(s)	75, 357, 428, 590, 752, 888, 918, 1589, 1608
DpnI	GATC	7 cut(s)	270, 564, 600, 774, 1565, 1625, 1833
DpnII	GATC	7 cut(s)	268, 562, 598, 772, 1563, 1623, 1831
Eam1104I	CTCTTC	3 cut(s)	38, 751, 2043
EarI	CTCTTC	3 cut(s)	38, 751, 2043
Eco130I	CCWWGG	3 cut(s)	1067, 1093, 1302
Eco147I	AGGCCT	2 cut(s)	1363, 1594
Eco47I	GGWCC	1 cut(s)	1430
Eco47III	AGCGCT	1 cut(s)	734
Eco57I	CTGAAG	2 cut(s)	1838, 2024
Eco88I	CYCGRG	2 cut(s)	1238, 1899
EcoNI	CCTNNNNNAGG	1 cut(s)	1588
EcoRII	CCWGG	6 cut(s)	781, 933, 1053, 1432, 1626, 2003
EcoT14I	CCWWGG	3 cut(s)	1067, 1093, 1302
EcoT22I	ATGCAT	2 cut(s)	1145, 1936
ErhI	CCWWGG	3 cut(s)	1067, 1093, 1302
FaeI	CATG	9 cut(s)	263, 446, 635, 1097, 1204, 1306, 1813, 1861, 1949
FaqI	GGGAC	1 cut(s)	1450
FatI	CATG	9 cut(s)	259, 442, 631, 1093, 1200, 1302, 1809, 1857, 1945
FauI	CCCGC	1 cut(s)	1609
FauNDI	CATATG	1 cut(s)	1038
FblI	GTMKAC	1 cut(s)	907
FokI	GGATG	6 cut(s)	302, 990, 1085, 1174, 1291, 1749
FspBI	CTAG	4 cut(s)	26, 803, 1472, 1530
GlaI	GCGC	3 cut(s)	185, 734, 1776
HaeII	RGCGCY	1 cut(s)	736
HaeIII	GGCC	5 cut(s)	177, 801, 868, 1363, 1594
HapII	CCGG	2 cut(s)	968, 1124
HhaI	GCGC	3 cut(s)	186, 735, 1777
Hin1II	CATG	9 cut(s)	263, 446, 635, 1097, 1204, 1306, 1813, 1861, 1949
Hin6I	GCGC	3 cut(s)	184, 733, 1775
HinP1I	GCGC	3 cut(s)	184, 733, 1775
HincII	GTYRAC	1 cut(s)	367
HindII	GTYRAC	1 cut(s)	367
HindIII	AAGCTT	1 cut(s)	1820
HinfI	GANTC	2 cut(s)	1991, 2015
HpaII	CCGG	2 cut(s)	968, 1124
HphI	GGTGA	5 cut(s)	307, 981, 1303, 1590, 1838
Hpy166II	GTNNAC	3 cut(s)	23, 367, 908
Hpy188III	TCNNGA	5 cut(s)	226, 683, 1191, 1270, 1607
Hpy8I	GTNNAC	3 cut(s)	23, 367, 908
Hpy99I	CGWCG	1 cut(s)	1573
HpyAV	CCTTC	6 cut(s)	26, 33, 61, 597, 1349, 1605
HpyCH4III	ACNGT	5 cut(s)	128, 222, 276, 849, 1462
HpyCH4IV	ACGT	4 cut(s)	326, 1386, 1480, 1568
HpyF3I	CTNAG	9 cut(s)	75, 357, 428, 590, 752, 888, 918, 1589, 1608
HpySE526I	ACGT	4 cut(s)	326, 1386, 1480, 1568
Hsp92II	CATG	9 cut(s)	263, 446, 635, 1097, 1204, 1306, 1813, 1861, 1949
HspAI	GCGC	3 cut(s)	184, 733, 1775
KpnI	GGTACC	1 cut(s)	1972
Kzo9I	GATC	7 cut(s)	268, 562, 598, 772, 1563, 1623, 1831
LguI	GCTCTTC	1 cut(s)	2043
LmnI	GCTCC	4 cut(s)	1344, 1525, 1609, 1978
LweI	GCATC	5 cut(s)	805, 995, 1090, 1152, 1547
MaeI	CTAG	4 cut(s)	26, 803, 1472, 1530
MaeII	ACGT	4 cut(s)	326, 1386, 1480, 1568
MaeIII	GTNAC	2 cut(s)	327, 1481
MalI	GATC	7 cut(s)	270, 564, 600, 774, 1565, 1625, 1833
MbiI	CCGCTC	1 cut(s)	1604
MboI	GATC	7 cut(s)	268, 562, 598, 772, 1563, 1623, 1831
MboII	GAAGA	8 cut(s)	55, 91, 204, 209, 768, 904, 1310, 2030
MflI	RGATCY	1 cut(s)	562
MhlI	GDGCHC	1 cut(s)	52
MluCI	AATT	9 cut(s)	470, 507, 787, 859, 896, 948, 961, 1048, 1060
MmeI	TCCRAC	1 cut(s)	1677
Mph1103I	ATGCAT	2 cut(s)	1145, 1936
MroXI	GAANNNNTTC	1 cut(s)	1995
MseI	TTAA	4 cut(s)	321, 617, 855, 1017
MslI	CAYNNNNRTG	3 cut(s)	1098, 1767, 1862
MspA1I	CMGCKG	1 cut(s)	2044
MspI	CCGG	2 cut(s)	968, 1124
MspR9I	CCNGG	7 cut(s)	783, 935, 1055, 1124, 1434, 1628, 2005
Mva1269I	GAATGC	3 cut(s)	242, 1084, 1180
MvaI	CCWGG	6 cut(s)	783, 935, 1055, 1434, 1628, 2005
NciI	CCSGG	1 cut(s)	1124
NcoI	CCATGG	2 cut(s)	1093, 1302
NdeI	CATATG	1 cut(s)	1038
NdeII	GATC	7 cut(s)	268, 562, 598, 772, 1563, 1623, 1831
NheI	GCTAGC	1 cut(s)	1471
NlaIII	CATG	9 cut(s)	263, 446, 635, 1097, 1204, 1306, 1813, 1861, 1949
NlaIV	GGNNCC	7 cut(s)	166, 176, 424, 867, 1651, 1970, 1980
NsiI	ATGCAT	2 cut(s)	1145, 1936
NspI	RCATGY	1 cut(s)	1861
PaqCI	CACCTGC	1 cut(s)	1999
PceI	AGGCCT	2 cut(s)	1363, 1594
PciSI	GCTCTTC	1 cut(s)	2043
PctI	GAATGC	3 cut(s)	242, 1084, 1180
PdmI	GAANNNNTTC	1 cut(s)	1995
PfeI	GAWTC	2 cut(s)	1991, 2015
PflMI	CCANNNNNTGG	2 cut(s)	782, 998
Psp1406I	AACGTT	1 cut(s)	1386
Psp6I	CCWGG	6 cut(s)	781, 933, 1053, 1432, 1626, 2003
PspGI	CCWGG	6 cut(s)	781, 933, 1053, 1432, 1626, 2003
PspN4I	GGNNCC	7 cut(s)	166, 176, 424, 867, 1651, 1970, 1980
PspPI	GGNCC	3 cut(s)	175, 866, 1430
PsrI	GAACNNNNNNTAC	2 cut(s)	240, 272
PstI	CTGCAG	1 cut(s)	1506
PstNI	CAGNNNCTG	1 cut(s)	161
PsuI	RGATCY	1 cut(s)	562
PvuII	CAGCTG	1 cut(s)	2044
RsaI	GTAC	3 cut(s)	314, 1928, 1970
RsaNI	GTAC	3 cut(s)	313, 1927, 1969
RseI	CAYNNNNRTG	3 cut(s)	1098, 1767, 1862
SapI	GCTCTTC	1 cut(s)	2043
SaqAI	TTAA	4 cut(s)	321, 617, 855, 1017
Sau3AI	GATC	7 cut(s)	268, 562, 598, 772, 1563, 1623, 1831
Sau96I	GGNCC	3 cut(s)	175, 866, 1430
ScrFI	CCNGG	7 cut(s)	783, 935, 1055, 1124, 1434, 1628, 2005
SduI	GDGCHC	1 cut(s)	52
SfaNI	GCATC	5 cut(s)	805, 995, 1090, 1152, 1547
SfcI	CTRYAG	1 cut(s)	1502
SinI	GGWCC	1 cut(s)	1430
SmiMI	CAYNNNNRTG	3 cut(s)	1098, 1767, 1862
SmlI	CTYRAG	2 cut(s)	549, 1754
SmoI	CTYRAG	2 cut(s)	549, 1754
SpeI	ACTAGT	1 cut(s)	25
Sse9I	AATT	9 cut(s)	470, 507, 787, 859, 896, 948, 961, 1048, 1060
SseBI	AGGCCT	2 cut(s)	1363, 1594
SsiI	CCGC	5 cut(s)	293, 1514, 1602, 1772, 1895
SspI	AATATT	1 cut(s)	623
SspMI	CTAG	4 cut(s)	26, 803, 1472, 1530
StuI	AGGCCT	2 cut(s)	1363, 1594
StyD4I	CCNGG	7 cut(s)	781, 933, 1053, 1122, 1432, 1626, 2003
StyI	CCWWGG	3 cut(s)	1067, 1093, 1302
TaaI	ACNGT	5 cut(s)	128, 222, 276, 849, 1462
TaiI	ACGT	4 cut(s)	329, 1389, 1483, 1571
TaqI	TCGA	4 cut(s)	601, 1550, 1571, 1616
TasI	AATT	9 cut(s)	470, 507, 787, 859, 896, 948, 961, 1048, 1060
TatI	WGTACW	2 cut(s)	312, 1926
TauI	GCSGC	2 cut(s)	1775, 1898
TfiI	GAWTC	2 cut(s)	1991, 2015
Tru1I	TTAA	4 cut(s)	321, 617, 855, 1017
Tru9I	TTAA	4 cut(s)	321, 617, 855, 1017
TscAI	CASTG	2 cut(s)	294, 1141
TspDTI	ATGAA	9 cut(s)	248, 431, 648, 841, 1187, 1730, 1826, 1925, 1962
TspGWI	ACGGA	3 cut(s)	534, 1291, 1395
TspRI	CASTG	2 cut(s)	294, 1141
Van91I	CCANNNNNTGG	2 cut(s)	782, 998
VpaK11BI	GGWCC	1 cut(s)	1430
XagI	CCTNNNNNAGG	1 cut(s)	1588
XapI	RAATTY	1 cut(s)	859
XceI	RCATGY	1 cut(s)	1861
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1198
XmiI	GTMKAC	1 cut(s)	907
XmnI	GAANNNNTTC	1 cut(s)	1995
XspI	CTAG	4 cut(s)	26, 803, 1472, 1530
Zsp2I	ATGCAT	2 cut(s)	1145, 1936

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.