Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0016297

Physical Location & Seq

Genomic Coordinates Reverse (-)

78807498 .. 78812044

Gene Structure 4547 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G045000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3126 bp

ATGAGGGTGAAAATGGAAAGTGGAGGTGAGGTAAAACGAAGAAAGAGTGCCCGAATTTCAGCATTAGAGGAGGAAAAGAGGAAAAAAGCATGCACCGTAGAAAGTGACAATGTTAGCGAGGATCAGACTCATGTTAGAAGAGGAACTTCTACAGGCAGAAGGGGCCGCAAGCGAAAAAGACTTGAAGATGTTGGCCTATCATCTCCACAGGATAGTGAAGACCCAAAAGATGAAGATTATTCGATCTACGAGGATGAAGCAGCATATCTGTCATATATACAGGAGGAGCCTGAAACTCGGATACTTGAGTTTATCCTTGATATACTGCAAAGGAGGGACACATGCAACTTATTCACAAAGCCTGTTGACCCTCAAGAGGTTTGGACCTATTACAGGATTATTAAAGAGCCAATGGATTTTGGAACCATAAGGACAAAACTTCAGGAAGGAAAATATAAAAACTTACAACAGTTTGAGCATGATGTGCTTCTAATATCCGCCAATGCAATGCACTTCAATTCATCGACCACCGTTTTTTACCAAGAGGCTCGAGCTATACAAGAGCTAGCGCAGCAGCTTTTCCAATCTCTAAGAGCTGATCCAGAACAGTTTCAGTTACAATTCTTACTGACAAAAAGAGGCCCCGGTAGGAAGCCGCAAAATCAAGGCAGAGGTTTACATAGAAGCGTTCCTAGACCAGTTGGCCGACCGAGTTCCTCGCGTGGTCCATATGTTAGAAGGAAAAGTCAAGCAGGCTCATCTAATGCAAACTCTTCCGGAATGAGAAATGGTAGAAACTCGAACTTAATGGAATCAGAGAGGCGTGAAACTTATAGGCTTTTAGATGAGGATAAATCACTATTATCAGTTCTCCATGATTCTGCAAAGATACTTCTTCATGTTGATAATGGTGATTCTGGATATAAAGAAAGTTTGATGCAGTTTGCTAAAAATTTGGGGCCAACAGCTCAAATGCTAGCCGAAAGTAAGTTGGTACAAGCTTTCAGCCAACCTCCGAATTGCCAGCCTCAAGCCACTCATCCAATACAAAACCAGAACTACATGGCTCCTGCTCCAGTCCTAGCTTTGCCAGCACCAGAGGTACCTGGTCGCCTTCTCGATGCTAACAATGGTCACATACATCGTAGTTCAAGTGAAAGTAAGTTGGCACAAGCTTTCAGCCAACCTCCGAATTGCCAGCCTCAAGCCAACTATCCAATACAGAGCCAAAACTACATGGCTCCTGCACCAGTCCTAGCTTTGCCAGCACCAGAGGTACCTGGTCACCTTCTCGATGGTAACAATGGTCAATTACATCGTGGTTCCCCATATTACTTGCCCAACAGTGATTCAAGTGCTTCATATTTTCACGGTGATGCTTCTGCACAAGGATATGCAAGAGCCAGCAACGGTGGTATACATATCAATGACAGTGCTAACAGGAGAAACATGAACCCTCCTAGCACATCCCAGTTAGGCATGGTTCAGAACTATCGTGACAAGGGAAAAATGGTTGTTGATCTAAATCAAAACATGGAGCTCGTAGGGACTGGTGATACAGAAGCCAGGGCCCATTCTCAAAATGTAAACAGCAATGTTCGGTTGGAGTCACATATCCGTGTTGTTAGAGATTTCAGTAGTCCTGGGACTTCAAGCAGTGGCATGAAGTTCAGGGCTGTGGACATGTTGGGCAAGCCTAACCCCCTAGAAAACCAGCAGCAGTTTCAGCAAGCGCATCAGTTGCCTAGTAGTACTGGGACTTCAAACAGTGGCATACTCTCTTGGGCTGTGAATAGGTTGGCCAATACTAGTCACCAGGAAAACCAGCAGCTTCAGCCAGCTCAGTTGTCTAGTACTGGATCATCCAACCAGTCAAGTTTACTAGAGATCATGGCCGGAAGAAGTACCTATTTGAAGCCATCATCATCTTCGTTGCGCTCTTCATCTGCAATGTTATCAAGTTTGAGTGAGGCATCAACCTCCTGGAATGATTTTGGCTCACACCTGAACAACAACAATGCAGCTAAATCTTCACAGACAGGTCAGCTGCTTCAATGGAGCCAACGCAGTGCAGAACAAGATCTGCAAGAAAATTGTAGCTTTCTAGACATGCTTGGTGACGGCTGTAACCCATGGGACAAGAGTAGTACACTTCTGAAAAACGAACAACATCTTGATGACGTTAATTATTCTTTGGGGAGTAATGCATTTATGAGAAATGAACAACAGCTTGGAGAGGTTAATTGTCAATCGGGGAACAGTACATCAATGAGAAATGAGCAACTGTTTGGTGAGGGTGGTGCTCAATGGGGGAGCAATACATTTCTGAGGAAAGAACAACATCTTGCCGACAGTAACTTTCCTCTGGAAAACAATACATTTTTGAGGAAAGAACAACAGCTCAATGGGGGTAACTTTCTGTTGGGGAATGGTACATTTATGAGGAAAGAGCAACAGCTGGATGTGGAGAACTTTCACTTGGGGAATAGTACATGTTTGAGTAAAGAGAAACAGCCTGACACTGGCAACTTCCAAGTGGGAAATAGCACATTTATGAGGAAAGACCAACTTGATGAAGCTAATTTCCAATTTGGGAATAGTACTTTCTTGAGGACAGCACAACAGTTTGATCAGGGTACTTTTCTACTGGGGAAGAATTCATTTATGAGCAAAGAACCACAGCTTGATCGTGGTAATGTTCAAATGGGGAATAGTACATTTATGAGCAAAGAACAACTGCTTAATGAGGGTACTTTCAGACAGGGGAACAGTACCTTTATGAGCAGGGAACAACGACTTGGTGAAGGTTCTTTTCAATTGGGGAACAGTACATGCATGTGGACAGAGCAACAGATTGATGAGGTCAGTCACCAATGGTGGAATAGTACATCTTCGAGGGCCAGTACATTTTCGAGGAAAGACCACCAATATCTGGGGAGGAGTGAACAACAGCAGCCTGTGGATGAGGGAGTAATGCCTGACTGGTACAGTGCAATATGTTCTGCCAATGAAAGAGCTTCTAGTAGTAGTAGTACTCAATGGTACCAAAAGGAGCCTATTGATCAATCTTTGCTGCCCTTGCTCTTGGTGGACAATCAGCAGCCTAACTTGGCTCTTCAGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

1041

Amino Acids

116.44

Weight (kDa)

6.4

Isoelectric Point (pI)

53.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	103 - 184	1.1e-20	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Image

Tree File

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Orthologous Genes (Group: OG0016297)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g41110
malus_domestica	MD03G1047400.v1.1 MD11G1049900.v1.1
pyrus_communis	pycom11g04050
rosa_chinensis	RchiOBHm_Chr5g0073891
rosa_laevigata	RLG00000036422
rosa_multiflora	Rmu_co8433661.1_g000001 Rmu_sc0000470.1_g000015
rosa_roxburghii	Rroxscaffold_1G00007480
rosa_rugosa	Rorug05G0427100
rosa_samantha	Rh5AG484100 Rh5BG504800 Rh5CG528600 Rh5DG517100
rosa_wichuraiana	Rw5G045000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	3 cut(s)	1102, 1276, 3042
AccB1I	GGYRCC	3 cut(s)	1102, 1276, 3042
AccB7I	CCANNNNNTGG	1 cut(s)	2932
AccI	GTMKAC	1 cut(s)	1417
AccII	CGCG	1 cut(s)	721
AccIII	TCCGGA	1 cut(s)	776
AciI	CCGC	3 cut(s)	166, 498, 656
AclWI	GGATC	3 cut(s)	129, 593, 1867
AcoI	YGGCCR	3 cut(s)	703, 1800, 1893
AcsI	RAATTY	3 cut(s)	54, 952, 2656
AcuI	CTGAAG	3 cut(s)	425, 1817, 3101
AfiI	CCNNNNNNNGG	4 cut(s)	376, 393, 2522, 2932
AflIII	ACRYGT	2 cut(s)	1683, 2492
AhlI	ACTAGT	1 cut(s)	1808
AjnI	CCWGG	6 cut(s)	1105, 1279, 1565, 1642, 1815, 1982
AjuI	GAANNNNNNNTTGG	6 cut(s)	2214, 2246, 2462, 2494, 2781, 2813
Alw21I	GWGCWC	2 cut(s)	1542, 2305
AlwI	GGATC	3 cut(s)	129, 593, 1867
Ama87I	CYCGRG	1 cut(s)	549
Aor13HI	TCCGGA	1 cut(s)	776
AoxI	GGCC	9 cut(s)	163, 193, 640, 703, 959, 1569, 1800, 1893, 2898
ApaI	GGGCCC	1 cut(s)	1573
ApoI	RAATTY	3 cut(s)	54, 952, 2656
Asp700I	GAANNNNTTC	1 cut(s)	609
Asp718I	GGTACC	3 cut(s)	1102, 1276, 3042
AspLEI	GCGC	3 cut(s)	571, 1735, 1938
AspS9I	GGNCC	8 cut(s)	163, 384, 641, 725, 959, 1569, 1570, 2898
AsuC2I	CCSGG	1 cut(s)	645
AsuNHI	GCTAGC	2 cut(s)	565, 976
AvaI	CYCGRG	1 cut(s)	549
AvaII	GGWCC	2 cut(s)	384, 725
BaeGI	GKGCMC	2 cut(s)	52, 1573
BaeI	ACNNNNGTAYC	2 cut(s)	293, 326
BalI	TGGCCA	1 cut(s)	1802
BanI	GGYRCC	3 cut(s)	1102, 1276, 3042
BanII	GRGCYC	2 cut(s)	1542, 1573
BarI	GAAGNNNNNNTAC	2 cut(s)	1744, 1776
BbsI	GAAGAC	1 cut(s)	225
Bbv12I	GWGCWC	2 cut(s)	1542, 2305
BccI	CCATC	2 cut(s)	1289, 1927
BceAI	ACGGC	1 cut(s)	2137
BciT130I	CCWGG	6 cut(s)	1107, 1281, 1567, 1644, 1817, 1984
BciVI	GTATCC	1 cut(s)	294
BclI	TGATCA	2 cut(s)	2629, 3061
BcnI	CCSGG	1 cut(s)	645
BcuI	ACTAGT	1 cut(s)	1808
BfmI	CTRYAG	1 cut(s)	150
BfuI	GTATCC	1 cut(s)	294
BglII	AGATCT	1 cut(s)	2080
BmcAI	AGTACT	4 cut(s)	1753, 1855, 2602, 3034
Bme1390I	CCNGG	7 cut(s)	645, 1107, 1281, 1567, 1644, 1817, 1984
Bme18I	GGWCC	2 cut(s)	384, 725
BmeT110I	CYCGRG	1 cut(s)	549
BmgT120I	GGNCC	8 cut(s)	163, 384, 641, 725, 959, 1569, 1570, 2898
BmrFI	CCNGG	7 cut(s)	645, 1107, 1281, 1567, 1644, 1817, 1984
BmrI	ACTGGG	3 cut(s)	1465, 1764, 2657
BmsI	GCATC	5 cut(s)	927, 1111, 1366, 1744, 1982
BmtI	GCTAGC	2 cut(s)	569, 980
BmuI	ACTGGG	3 cut(s)	1465, 1764, 2657
BpiI	GAAGAC	1 cut(s)	225
BpmI	CTGGAG	1 cut(s)	1059
BpuEI	CTTGAG	5 cut(s)	326, 357, 1014, 1188, 2629
BpuMI	CCSGG	1 cut(s)	645
BsaBI	GATNNNNATC	1 cut(s)	1524
BsaJI	CCNNGG	4 cut(s)	643, 1566, 1643, 2132
BsaWI	WCCGGW	1 cut(s)	776
BsaXI	ACNNNNNCTCC	2 cut(s)	15, 45
Bsc4I	CCNNNNNNNGG	4 cut(s)	376, 393, 2522, 2932
Bse3DI	GCAATG	3 cut(s)	513, 1600, 1956
Bse8I	GATNNNNATC	1 cut(s)	1524
BseAI	TCCGGA	1 cut(s)	776
BseBI	CCWGG	6 cut(s)	1107, 1281, 1567, 1644, 1817, 1984
BseDI	CCNNGG	4 cut(s)	643, 1566, 1643, 2132
BseGI	GGATG	6 cut(s)	259, 1039, 1466, 1862, 2467, 2968
BseJI	GATNNNNATC	1 cut(s)	1524
BseLI	CCNNNNNNNGG	4 cut(s)	376, 393, 2522, 2932
BseMI	GCAATG	3 cut(s)	513, 1600, 1956
BseMII	CTCAG	2 cut(s)	1856, 2318
BseRI	GAGGAG	3 cut(s)	83, 299, 2953
BseSI	GKGCMC	2 cut(s)	52, 1573
BsgI	GTGCAG	3 cut(s)	1230, 1368, 2091
Bsh1236I	CGCG	1 cut(s)	721
Bsh1285I	CGRYCG	1 cut(s)	710
BshFI	GGCC	9 cut(s)	165, 195, 642, 705, 961, 1571, 1802, 1895, 2900
BshNI	GGYRCC	3 cut(s)	1102, 1276, 3042
BsiEI	CGRYCG	1 cut(s)	710
BsiHKAI	GWGCWC	2 cut(s)	1542, 2305
BsiHKCI	CYCGRG	1 cut(s)	549
BsiSI	CCGG	3 cut(s)	645, 777, 1896
BslFI	GGGAC	5 cut(s)	350, 1561, 1660, 1771, 2150
BslI	CCNNNNNNNGG	4 cut(s)	376, 393, 2522, 2932
BsmFI	GGGAC	5 cut(s)	350, 1561, 1660, 1771, 2150
BsnI	GGCC	9 cut(s)	165, 195, 642, 705, 961, 1571, 1802, 1895, 2900
BsoBI	CYCGRG	1 cut(s)	549
Bsp120I	GGGCCC	1 cut(s)	1569
Bsp1286I	GDGCHC	4 cut(s)	52, 1542, 1573, 2305
Bsp13I	TCCGGA	1 cut(s)	776
Bsp19I	CCATGG	1 cut(s)	2132
BspACI	CCGC	3 cut(s)	166, 498, 656
BspANI	GGCC	9 cut(s)	165, 195, 642, 705, 961, 1571, 1802, 1895, 2900
BspCNI	CTCAG	2 cut(s)	1855, 2319
BspEI	TCCGGA	1 cut(s)	776
BspFNI	CGCG	1 cut(s)	721
BspOI	GCTAGC	2 cut(s)	569, 980
BspPI	GGATC	3 cut(s)	129, 593, 1867
BspQI	GCTCTTC	2 cut(s)	1945, 3120
BspT107I	GGYRCC	3 cut(s)	1102, 1276, 3042
BsrDI	GCAATG	3 cut(s)	513, 1600, 1956
BssECI	CCNNGG	4 cut(s)	643, 1566, 1643, 2132
BssNAI	GTATAC	1 cut(s)	1418
BssT1I	CCWWGG	1 cut(s)	2132
Bst1107I	GTATAC	1 cut(s)	1418
Bst2UI	CCWGG	6 cut(s)	1107, 1281, 1567, 1644, 1817, 1984
Bst6I	CTCTTC	4 cut(s)	133, 778, 1945, 3120
BstAPI	GCANNNNNTGC	2 cut(s)	484, 1741
BstDEI	CTNAG	3 cut(s)	590, 1842, 2327
BstDSI	CCRYGG	1 cut(s)	2132
BstEII	GGTNACC	1 cut(s)	1283
BstENI	CCTNNNNNAGG	1 cut(s)	391
BstF5I	GGATG	6 cut(s)	259, 1039, 1466, 1862, 2467, 2968
BstFNI	CGCG	1 cut(s)	721
BstHHI	GCGC	3 cut(s)	571, 1735, 1938
BstMCI	CGRYCG	1 cut(s)	710
BstMWI	GCNNNNNNNGC	9 cut(s)	162, 484, 571, 1091, 1265, 1726, 1741, 1834, 3079
BstNI	CCWGG	6 cut(s)	1107, 1281, 1567, 1644, 1817, 1984
BstNSI	RCATGY	7 cut(s)	93, 345, 1687, 2113, 2496, 2835, 2839
BstPI	GGTNACC	1 cut(s)	1283
BstSCI	CCNGG	7 cut(s)	643, 1105, 1279, 1565, 1642, 1815, 1982
BstSFI	CTRYAG	1 cut(s)	150
BstSLI	GKGCMC	2 cut(s)	52, 1573
BstUI	CGCG	1 cut(s)	721
BstV2I	GAAGAC	1 cut(s)	225
BstX2I	RGATCY	1 cut(s)	2080
BstYI	RGATCY	1 cut(s)	2080
BstZ17I	GTATAC	1 cut(s)	1418
BsuI	GTATCC	1 cut(s)	294
BsuRI	GGCC	9 cut(s)	165, 195, 642, 705, 961, 1571, 1802, 1895, 2900
BtgI	CCRYGG	1 cut(s)	2132
BtsCI	GGATG	6 cut(s)	259, 1039, 1466, 1862, 2467, 2968
BtsI	GCAGTG	2 cut(s)	1663, 2074
BtsIMutI	CAGTG	7 cut(s)	1351, 1438, 1663, 1774, 2074, 2520, 2995
CfoI	GCGC	3 cut(s)	571, 1735, 1938
Cfr13I	GGNCC	8 cut(s)	163, 384, 641, 725, 959, 1569, 1570, 2898
CsiI	ACCWGGT	2 cut(s)	1105, 1279
DdeI	CTNAG	3 cut(s)	590, 1842, 2327
EaeI	YGGCCR	3 cut(s)	703, 1800, 1893
Eam1104I	CTCTTC	4 cut(s)	133, 778, 1945, 3120
EarI	CTCTTC	4 cut(s)	133, 778, 1945, 3120
EciI	GGCGGA	1 cut(s)	487
Ecl136II	GAGCTC	1 cut(s)	1540
Eco130I	CCWWGG	1 cut(s)	2132
Eco24I	GRGCYC	2 cut(s)	1542, 1573
Eco47I	GGWCC	2 cut(s)	384, 725
Eco53kI	GAGCTC	1 cut(s)	1540
Eco57I	CTGAAG	3 cut(s)	425, 1817, 3101
Eco88I	CYCGRG	1 cut(s)	549
Eco91I	GGTNACC	1 cut(s)	1283
EcoICRI	GAGCTC	1 cut(s)	1540
EcoNI	CCTNNNNNAGG	1 cut(s)	391
EcoO109I	RGGNCCY	2 cut(s)	641, 1569
EcoO65I	GGTNACC	1 cut(s)	1283
EcoRI	GAATTC	1 cut(s)	2656
EcoRII	CCWGG	6 cut(s)	1105, 1279, 1565, 1642, 1815, 1982
EcoT14I	CCWWGG	1 cut(s)	2132
EcoT22I	ATGCAT	2 cut(s)	2209, 2837
EcoT38I	GRGCYC	2 cut(s)	1542, 1573
ErhI	CCWWGG	1 cut(s)	2132
FalI	AAGNNNNNCTT	4 cut(s)	130, 162, 2553, 2585
FaqI	GGGAC	5 cut(s)	350, 1561, 1660, 1771, 2150
FauNDI	CATATG	1 cut(s)	730
FbaI	TGATCA	2 cut(s)	2629, 3061
FblI	GTMKAC	1 cut(s)	1417
FokI	GGATG	6 cut(s)	266, 1026, 1453, 1849, 2474, 2975
FriOI	GRGCYC	2 cut(s)	1542, 1573
GlaI	GCGC	3 cut(s)	570, 1734, 1937
GsuI	CTGGAG	1 cut(s)	1059
HaeIII	GGCC	9 cut(s)	165, 195, 642, 705, 961, 1571, 1802, 1895, 2900
HapII	CCGG	3 cut(s)	645, 777, 1896
HhaI	GCGC	3 cut(s)	571, 1735, 1938
Hin6I	GCGC	3 cut(s)	569, 1733, 1936
HinP1I	GCGC	3 cut(s)	569, 1733, 1936
HincII	GTYRAC	1 cut(s)	367
HindII	GTYRAC	1 cut(s)	367
HindIII	AAGCTT	2 cut(s)	999, 1173
HinfI	GANTC	6 cut(s)	127, 812, 878, 914, 1349, 1607
HpaII	CCGG	3 cut(s)	645, 777, 1896
Hpy188I	TCNGA	9 cut(s)	126, 300, 817, 1017, 1191, 1488, 2157, 2328, 2759
HpyAV	CCTTC	6 cut(s)	153, 440, 732, 1124, 1298, 2798
HpyCH4IV	ACGT	1 cut(s)	2181
HpyF10VI	GCNNNNNNNGC	9 cut(s)	162, 484, 571, 1091, 1265, 1726, 1741, 1834, 3079
HpyF3I	CTNAG	3 cut(s)	590, 1842, 2327
HpySE526I	ACGT	1 cut(s)	2181
HspAI	GCGC	3 cut(s)	569, 1733, 1936
Kpn2I	TCCGGA	1 cut(s)	776
KpnI	GGTACC	3 cut(s)	1106, 1280, 3046
Ksp22I	TGATCA	2 cut(s)	2629, 3061
LguI	GCTCTTC	2 cut(s)	1945, 3120
LmnI	GCTCC	8 cut(s)	286, 1072, 1078, 1246, 1537, 2058, 2313, 3052
LweI	GCATC	5 cut(s)	927, 1111, 1366, 1744, 1982
MabI	ACCWGGT	2 cut(s)	1105, 1279
MaeII	ACGT	1 cut(s)	2181
MfeI	CAATTG	1 cut(s)	2816
MflI	RGATCY	1 cut(s)	2080
MhlI	GDGCHC	4 cut(s)	52, 1542, 1573, 2305
MlsI	TGGCCA	1 cut(s)	1802
MluNI	TGGCCA	1 cut(s)	1802
MlyI	GAGTC	2 cut(s)	121, 1616
MmeI	TCCRAC	2 cut(s)	1584, 1890
Mox20I	TGGCCA	1 cut(s)	1802
Mph1103I	ATGCAT	2 cut(s)	2209, 2837
MroI	TCCGGA	1 cut(s)	776
MroXI	GAANNNNTTC	1 cut(s)	609
MscI	TGGCCA	1 cut(s)	1802
MseI	TTAA	5 cut(s)	402, 806, 2184, 2241, 2742
MslI	CAYNNNNRTG	6 cut(s)	1374, 1425, 1617, 2175, 2552, 2836
Msp20I	TGGCCA	1 cut(s)	1802
MspA1I	CMGCKG	3 cut(s)	2047, 2458, 3121
MspI	CCGG	3 cut(s)	645, 777, 1896
MspR9I	CCNGG	7 cut(s)	645, 1107, 1281, 1567, 1644, 1817, 1984
MunI	CAATTG	1 cut(s)	2816
MvaI	CCWGG	6 cut(s)	1107, 1281, 1567, 1644, 1817, 1984
MvnI	CGCG	1 cut(s)	721
MwoI	GCNNNNNNNGC	9 cut(s)	162, 484, 571, 1091, 1265, 1726, 1741, 1834, 3079
NciI	CCSGG	1 cut(s)	645
NcoI	CCATGG	1 cut(s)	2132
NdeI	CATATG	1 cut(s)	730
NheI	GCTAGC	2 cut(s)	565, 976
NmuCI	GTSAC	8 cut(s)	104, 1133, 1283, 1496, 1608, 1811, 2117, 2867
NsiI	ATGCAT	2 cut(s)	2209, 2837
NspI	RCATGY	7 cut(s)	93, 345, 1687, 2113, 2496, 2835, 2839
PaeI	GCATGC	1 cut(s)	93
PaeR7I	CTCGAG	1 cut(s)	549
PciI	ACATGT	2 cut(s)	1683, 2492
PciSI	GCTCTTC	2 cut(s)	1945, 3120
PdmI	GAANNNNTTC	1 cut(s)	609
PfeI	GAWTC	4 cut(s)	812, 878, 914, 1349
PflMI	CCANNNNNTGG	1 cut(s)	2932
PfoI	TCCNGGA	1 cut(s)	1982
PleI	GAGTC	2 cut(s)	121, 1615
PpsI	GAGTC	2 cut(s)	121, 1615
PscI	ACATGT	2 cut(s)	1683, 2492
Psp124BI	GAGCTC	1 cut(s)	1542
Psp6I	CCWGG	6 cut(s)	1105, 1279, 1565, 1642, 1815, 1982
PspEI	GGTNACC	1 cut(s)	1283
PspGI	CCWGG	6 cut(s)	1105, 1279, 1565, 1642, 1815, 1982
PspOMI	GGGCCC	1 cut(s)	1569
PspPI	GGNCC	8 cut(s)	163, 384, 641, 725, 959, 1569, 1570, 2898
PspXI	VCTCGAGB	1 cut(s)	549
PsuI	RGATCY	1 cut(s)	2080
PvuII	CAGCTG	3 cut(s)	2047, 2458, 3121
RseI	CAYNNNNRTG	6 cut(s)	1374, 1425, 1617, 2175, 2552, 2836
SacI	GAGCTC	1 cut(s)	1542
SapI	GCTCTTC	2 cut(s)	1945, 3120
SaqAI	TTAA	5 cut(s)	402, 806, 2184, 2241, 2742
Sau96I	GGNCC	8 cut(s)	163, 384, 641, 725, 959, 1569, 1570, 2898
ScaI	AGTACT	4 cut(s)	1753, 1855, 2602, 3034
SchI	GAGTC	2 cut(s)	121, 1616
ScrFI	CCNGG	7 cut(s)	645, 1107, 1281, 1567, 1644, 1817, 1984
SduI	GDGCHC	4 cut(s)	52, 1542, 1573, 2305
SexAI	ACCWGGT	2 cut(s)	1105, 1279
SfaNI	GCATC	5 cut(s)	927, 1111, 1366, 1744, 1982
SfcI	CTRYAG	1 cut(s)	150
Sfr274I	CTCGAG	1 cut(s)	549
SinI	GGWCC	2 cut(s)	384, 725
SlaI	CTCGAG	1 cut(s)	549
SmiMI	CAYNNNNRTG	6 cut(s)	1374, 1425, 1617, 2175, 2552, 2836
SmlI	CTYRAG	6 cut(s)	305, 372, 549, 1029, 1203, 2608
SmoI	CTYRAG	6 cut(s)	305, 372, 549, 1029, 1203, 2608
SpeI	ACTAGT	1 cut(s)	1808
SphI	GCATGC	1 cut(s)	93
SsiI	CCGC	3 cut(s)	166, 498, 656
SstI	GAGCTC	1 cut(s)	1542
StyD4I	CCNGG	7 cut(s)	643, 1105, 1279, 1565, 1642, 1815, 1982
StyI	CCWWGG	1 cut(s)	2132
TaiI	ACGT	1 cut(s)	2184
TaqI	TCGA	8 cut(s)	242, 524, 550, 800, 1119, 1293, 2894, 2912
TaqII	GACCGA	1 cut(s)	724
TauI	GCSGC	2 cut(s)	168, 658
TfiI	GAWTC	4 cut(s)	812, 878, 914, 1349
Tru1I	TTAA	5 cut(s)	402, 806, 2184, 2241, 2742
Tru9I	TTAA	5 cut(s)	402, 806, 2184, 2241, 2742
TscAI	CASTG	7 cut(s)	1351, 1438, 1663, 1774, 2074, 2527, 2995
TseFI	GTSAC	8 cut(s)	104, 1133, 1283, 1496, 1608, 1811, 2117, 2867
Tsp45I	GTSAC	8 cut(s)	104, 1133, 1283, 1496, 1608, 1811, 2117, 2867
TspGWI	ACGGA	1 cut(s)	1607
TspRI	CASTG	7 cut(s)	1351, 1438, 1663, 1774, 2074, 2527, 2995
Van91I	CCANNNNNTGG	1 cut(s)	2932
VpaK11BI	GGWCC	2 cut(s)	384, 725
XagI	CCTNNNNNAGG	1 cut(s)	391
XapI	RAATTY	3 cut(s)	54, 952, 2656
XbaI	TCTAGA	1 cut(s)	2104
XceI	RCATGY	7 cut(s)	93, 345, 1687, 2113, 2496, 2835, 2839
XhoI	CTCGAG	1 cut(s)	549
XmiI	GTMKAC	1 cut(s)	1417
XmnI	GAANNNNTTC	1 cut(s)	609
ZrmI	AGTACT	4 cut(s)	1753, 1855, 2602, 3034
Zsp2I	ATGCAT	2 cut(s)	2209, 2837

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.