Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000470.1

Orthogroup ID

OG0016297

Physical Location & Seq

Genomic Coordinates Reverse (-)

64227 .. 68653

Gene Structure 4427 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000470.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2946 bp

atggaaagtggaggtgaggtaaaacgaagaaagagtgcccgaatttcagcattagaggaggaaaagaggaaaaaagcatgcaccgtagaaagtgacaatgttagcgaggatcagactcatgttagaagaggaacttctacaggcagaaggggccgcaagcgaaaaagacttgaagatgttggcctatcatctccacaggatagtgaagacccaaaagatgaagattattcgatctacgaggatgaagcagcatatctgtcatatatacaggaggagcctgaaactcggatacttgagtttatccttgatatactgcaaaggagggacacatgcaacttattcacaaagcctgttgaccctcaagaggctcgagctatacaagagctagcgcagcagcttttccaatctctaagagctgatccagaacagtttcagttacaattcttactgacaaaaagaggccccggtaggaagccgaaaaatcaaggcagaggttcacatagaagcgttcctagaccagttggccgaccgagttcctcgcgtggtccatatgttagaaggaaaagtcaagcaggctcatctaatgcaaactcttccggaatgagaaatggtagaaactcgaacttaatggaatcagagaggcgtgaaacttataggctttcggatgaggataaatcactattatcagttgtccatgattctgcaaagatacttcttcatgttgataatggtgattctggatataaagaaagtttgatgcagtttgctaaaaatttggggccaacagctcaaatgctagccgaaagtaagttggtacaagctttcagccaacctccgaattgccagcctcaagccactcatccaatacaaacccagaactacatggctcctgctccagtcctagctttgccagcaccagaggtacctggtcgccttctcgatgctaaaaatggtcacatacatcgtagttcaagtgaaagtaagttggcacaagctttcagccaacctccgaattgccagcctcaagccaactatccattacagagccaaaactacatggctcctgcaccagtcctagctttgccagcaccagaggtacctggtcaccttctcgatggtaacaatggtcaattacatcgtggttccccatattacttgcccaacagtgattcaagtgcttcatattttcacggtgatgcttctgcacaaggatatgcaagagccagcaacggtggtatacatatcaatgacagtgctaacaggagaaacatgaaccctcctagcacatcccagttaggcatggttcagaactatcgtgacaagggaaaaatggttgttgatctaaatcaaaacatggagctcgtagggactggtgatacagaagccagggcccattctcaaaatgtaaacagcaatgttcggttggagtcacatatccgtgttgttagagatttcagtagtcctgggacttcaagcagtggcatgaagttcagggctgtggacatgttgggcaagcctaaccccctagaaaaccagcagcagtttcagcaagctcatcagttgcctagtagtactgggacttcaaacagtggcatactctcttgggctgtgaataggttggccaatactagtcaccaggaaaaccagcagcttcagccagcacagttgtctagtactggatcatccaaccagtcaagtttactagagatcatggccggaagaagtacctatttgaagccatcatcatcttcgttgcgctcttcatctgcaatgttatcaagtttgagtgaggcatcaacctcctggaatgattttggctcacacctgaacaacaacaatgcagctaaatctgcacagacaggtcagcagcttcaatggagccaacgcagtgcagaacaagatctgcaagaaaattgtagctttctagacatgcttggtgacggctgtaacccatgggacaagagtagtacacttctgaaaaacgaacaacatcttgatgacgttaattattctttggggagtaatgcatttatgagaaatgaacaacagcttggagaggttaattgtcaatcggggaacagtacatcaatgagaaatgaacaactgcttggtgagggtggtgctcaatgggggagcaatacatttctgaggaaagaacaacatcttgccgacagtaactttcctctggaaaacaatacatttttgaggaaagaacaacagctcaatgggggtaactttctgttggggaatggtacatttatgaggaaagagcaacagctggatgtggagaactttcacttggggaatagtacatgtttgagtaaagagaaacagcctgagaatggcaacttccaagtgggaaatagcacatttatgaggaaagaccaacttgatgaagctaatttccaatttgggaatagtactttcttgaggacagcacaacagtttgatcagggtacttttctactggggaagaattcatttatgagcaaagaaccacagcttgatcgtggtaatgttcaaatggggaatagtacatttatgagcaaagaacaactacttaatgagggtactttcagacaggggaacagtacctttatgagcagagaacaacgacttggtgaaggttcttttcaattggggaacagtacatgtatgtggacagagcaacagattgatgagatcaatcaccaatggtggaatagtacatcttcgaggaccagtacattttcgaggaaagaccaccaatatctggggaggagtgaacaacagcagcctgtggatgagggagtaatgcctgactggtacagtgcaatatgttctgccaatgaaagagcttctagtagtagtagtactcaatggtaccaaaaggagcctattgatcaatctttgctgcccttgctcttggtggacaatcagcagcctaacttggctcttcagctgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

981

Amino Acids

109.21

Weight (kDa)

6.35

Isoelectric Point (pI)

55.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016297)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g41110
malus_domestica	MD03G1047400.v1.1 MD11G1049900.v1.1
pyrus_communis	pycom11g04050
rosa_chinensis	RchiOBHm_Chr5g0073891
rosa_laevigata	RLG00000036422
rosa_multiflora	Rmu_co8433661.1_g000001 Rmu_sc0000470.1_g000015
rosa_roxburghii	Rroxscaffold_1G00007480
rosa_rugosa	Rorug05G0427100
rosa_samantha	Rh5AG484100 Rh5BG504800 Rh5CG528600 Rh5DG517100
rosa_wichuraiana	Rw5G045000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	3 cut(s)	922, 1096, 2862
AccB1I	GGYRCC	3 cut(s)	922, 1096, 2862
AccB7I	CCANNNNNTGG	1 cut(s)	2752
AccI	GTMKAC	1 cut(s)	1237
AccII	CGCG	1 cut(s)	541
AccIII	TCCGGA	1 cut(s)	596
AciI	CCGC	1 cut(s)	154
AclWI	GGATC	3 cut(s)	117, 413, 1687
AcoI	YGGCCR	3 cut(s)	523, 1620, 1713
AcsI	RAATTY	3 cut(s)	42, 772, 2476
AcuI	CTGAAG	2 cut(s)	1637, 2921
AfiI	CCNNNNNNNGG	3 cut(s)	364, 2342, 2752
AflIII	ACRYGT	3 cut(s)	1503, 2312, 2651
AgsI	TTSAA	9 cut(s)	173, 972, 1173, 1473, 1584, 1735, 1874, 2522, 2636
AhlI	ACTAGT	1 cut(s)	1628
AjnI	CCWGG	6 cut(s)	925, 1099, 1385, 1462, 1635, 1802
AjuI	GAANNNNNNNTTGG	8 cut(s)	2034, 2066, 2091, 2123, 2282, 2314, 2601, 2633
Alw21I	GWGCWC	2 cut(s)	1362, 2125
AlwI	GGATC	3 cut(s)	117, 413, 1687
Ama87I	CYCGRG	1 cut(s)	369
Aor13HI	TCCGGA	1 cut(s)	596
AoxI	GGCC	8 cut(s)	151, 181, 460, 523, 779, 1389, 1620, 1713
ApaI	GGGCCC	1 cut(s)	1393
ApoI	RAATTY	3 cut(s)	42, 772, 2476
Asp700I	GAANNNNTTC	1 cut(s)	429
Asp718I	GGTACC	3 cut(s)	922, 1096, 2862
AspLEI	GCGC	2 cut(s)	391, 1758
AspS9I	GGNCC	7 cut(s)	151, 461, 545, 779, 1389, 1390, 2718
AsuC2I	CCSGG	1 cut(s)	465
AsuNHI	GCTAGC	2 cut(s)	385, 796
AvaI	CYCGRG	1 cut(s)	369
AvaII	GGWCC	2 cut(s)	545, 2718
BaeGI	GKGCMC	2 cut(s)	40, 1393
BaeI	ACNNNNGTAYC	2 cut(s)	281, 314
BalI	TGGCCA	1 cut(s)	1622
BanI	GGYRCC	3 cut(s)	922, 1096, 2862
BanII	GRGCYC	2 cut(s)	1362, 1393
BarI	GAAGNNNNNNTAC	2 cut(s)	1564, 1596
BbsI	GAAGAC	1 cut(s)	213
Bbv12I	GWGCWC	2 cut(s)	1362, 2125
BccI	CCATC	2 cut(s)	1109, 1747
BceAI	ACGGC	1 cut(s)	1957
BciT130I	CCWGG	6 cut(s)	927, 1101, 1387, 1464, 1637, 1804
BciVI	GTATCC	1 cut(s)	282
BclI	TGATCA	2 cut(s)	2449, 2881
BcnI	CCSGG	1 cut(s)	465
BcuI	ACTAGT	1 cut(s)	1628
BfmI	CTRYAG	1 cut(s)	138
BfuI	GTATCC	1 cut(s)	282
BglII	AGATCT	1 cut(s)	1900
BmcAI	AGTACT	4 cut(s)	1573, 1675, 2422, 2854
Bme1390I	CCNGG	7 cut(s)	465, 927, 1101, 1387, 1464, 1637, 1804
Bme18I	GGWCC	2 cut(s)	545, 2718
BmeT110I	CYCGRG	1 cut(s)	369
BmgT120I	GGNCC	7 cut(s)	151, 461, 545, 779, 1389, 1390, 2718
BmrFI	CCNGG	7 cut(s)	465, 927, 1101, 1387, 1464, 1637, 1804
BmrI	ACTGGG	3 cut(s)	1285, 1584, 2477
BmsI	GCATC	4 cut(s)	747, 931, 1186, 1802
BmtI	GCTAGC	2 cut(s)	389, 800
BmuI	ACTGGG	3 cut(s)	1285, 1584, 2477
BpiI	GAAGAC	1 cut(s)	213
BpmI	CTGGAG	1 cut(s)	879
BpuEI	CTTGAG	5 cut(s)	314, 345, 834, 1008, 2449
BpuMI	CCSGG	1 cut(s)	465
BsaBI	GATNNNNATC	1 cut(s)	1344
BsaJI	CCNNGG	4 cut(s)	463, 1386, 1463, 1952
BsaWI	WCCGGW	1 cut(s)	596
BsaXI	ACNNNNNCTCC	1 cut(s)	33
Bsc4I	CCNNNNNNNGG	3 cut(s)	364, 2342, 2752
Bse3DI	GCAATG	2 cut(s)	1420, 1776
Bse8I	GATNNNNATC	1 cut(s)	1344
BseAI	TCCGGA	1 cut(s)	596
BseBI	CCWGG	6 cut(s)	927, 1101, 1387, 1464, 1637, 1804
BseDI	CCNNGG	4 cut(s)	463, 1386, 1463, 1952
BseGI	GGATG	7 cut(s)	247, 670, 859, 1286, 1682, 2287, 2788
BseJI	GATNNNNATC	1 cut(s)	1344
BseLI	CCNNNNNNNGG	3 cut(s)	364, 2342, 2752
BseMI	GCAATG	2 cut(s)	1420, 1776
BseMII	CTCAG	2 cut(s)	2138, 2328
BseRI	GAGGAG	3 cut(s)	71, 287, 2773
BseSI	GKGCMC	2 cut(s)	40, 1393
BsgI	GTGCAG	4 cut(s)	1050, 1188, 1836, 1911
Bsh1236I	CGCG	1 cut(s)	541
Bsh1285I	CGRYCG	1 cut(s)	530
BshFI	GGCC	8 cut(s)	153, 183, 462, 525, 781, 1391, 1622, 1715
BshNI	GGYRCC	3 cut(s)	922, 1096, 2862
BsiEI	CGRYCG	1 cut(s)	530
BsiHKAI	GWGCWC	2 cut(s)	1362, 2125
BsiHKCI	CYCGRG	1 cut(s)	369
BsiSI	CCGG	3 cut(s)	465, 597, 1716
BslFI	GGGAC	5 cut(s)	338, 1381, 1480, 1591, 1970
BslI	CCNNNNNNNGG	3 cut(s)	364, 2342, 2752
BsmFI	GGGAC	5 cut(s)	338, 1381, 1480, 1591, 1970
BsnI	GGCC	8 cut(s)	153, 183, 462, 525, 781, 1391, 1622, 1715
BsoBI	CYCGRG	1 cut(s)	369
Bsp120I	GGGCCC	1 cut(s)	1389
Bsp1286I	GDGCHC	4 cut(s)	40, 1362, 1393, 2125
Bsp13I	TCCGGA	1 cut(s)	596
Bsp19I	CCATGG	1 cut(s)	1952
BspACI	CCGC	1 cut(s)	154
BspANI	GGCC	8 cut(s)	153, 183, 462, 525, 781, 1391, 1622, 1715
BspCNI	CTCAG	2 cut(s)	2139, 2329
BspEI	TCCGGA	1 cut(s)	596
BspFNI	CGCG	1 cut(s)	541
BspOI	GCTAGC	2 cut(s)	389, 800
BspPI	GGATC	3 cut(s)	117, 413, 1687
BspQI	GCTCTTC	2 cut(s)	1765, 2940
BspT107I	GGYRCC	3 cut(s)	922, 1096, 2862
BsrDI	GCAATG	2 cut(s)	1420, 1776
BssECI	CCNNGG	4 cut(s)	463, 1386, 1463, 1952
BssNAI	GTATAC	1 cut(s)	1238
BssT1I	CCWWGG	1 cut(s)	1952
Bst1107I	GTATAC	1 cut(s)	1238
Bst2UI	CCWGG	6 cut(s)	927, 1101, 1387, 1464, 1637, 1804
Bst6I	CTCTTC	4 cut(s)	121, 598, 1765, 2940
BstDEI	CTNAG	3 cut(s)	410, 2147, 2337
BstDSI	CCRYGG	1 cut(s)	1952
BstEII	GGTNACC	1 cut(s)	1103
BstF5I	GGATG	7 cut(s)	247, 670, 859, 1286, 1682, 2287, 2788
BstFNI	CGCG	1 cut(s)	541
BstHHI	GCGC	2 cut(s)	391, 1758
BstMCI	CGRYCG	1 cut(s)	530
BstMWI	GCNNNNNNNGC	8 cut(s)	150, 391, 911, 1085, 1546, 1654, 1850, 2899
BstNI	CCWGG	6 cut(s)	927, 1101, 1387, 1464, 1637, 1804
BstNSI	RCATGY	6 cut(s)	81, 333, 1507, 1933, 2316, 2655
BstPI	GGTNACC	1 cut(s)	1103
BstSCI	CCNGG	7 cut(s)	463, 925, 1099, 1385, 1462, 1635, 1802
BstSFI	CTRYAG	1 cut(s)	138
BstSLI	GKGCMC	2 cut(s)	40, 1393
BstUI	CGCG	1 cut(s)	541
BstV2I	GAAGAC	1 cut(s)	213
BstX2I	RGATCY	1 cut(s)	1900
BstYI	RGATCY	1 cut(s)	1900
BstZ17I	GTATAC	1 cut(s)	1238
BsuI	GTATCC	1 cut(s)	282
BsuRI	GGCC	8 cut(s)	153, 183, 462, 525, 781, 1391, 1622, 1715
BtgI	CCRYGG	1 cut(s)	1952
BtsCI	GGATG	7 cut(s)	247, 670, 859, 1286, 1682, 2287, 2788
BtsI	GCAGTG	2 cut(s)	1483, 1894
BtsIMutI	CAGTG	6 cut(s)	1171, 1258, 1483, 1594, 1894, 2815
CfoI	GCGC	2 cut(s)	391, 1758
Cfr13I	GGNCC	7 cut(s)	151, 461, 545, 779, 1389, 1390, 2718
CsiI	ACCWGGT	2 cut(s)	925, 1099
DdeI	CTNAG	3 cut(s)	410, 2147, 2337
EaeI	YGGCCR	3 cut(s)	523, 1620, 1713
Eam1104I	CTCTTC	4 cut(s)	121, 598, 1765, 2940
EarI	CTCTTC	4 cut(s)	121, 598, 1765, 2940
Ecl136II	GAGCTC	1 cut(s)	1360
Eco130I	CCWWGG	1 cut(s)	1952
Eco24I	GRGCYC	2 cut(s)	1362, 1393
Eco47I	GGWCC	2 cut(s)	545, 2718
Eco53kI	GAGCTC	1 cut(s)	1360
Eco57I	CTGAAG	2 cut(s)	1637, 2921
Eco88I	CYCGRG	1 cut(s)	369
Eco91I	GGTNACC	1 cut(s)	1103
EcoICRI	GAGCTC	1 cut(s)	1360
EcoO109I	RGGNCCY	2 cut(s)	461, 1389
EcoO65I	GGTNACC	1 cut(s)	1103
EcoRI	GAATTC	1 cut(s)	2476
EcoRII	CCWGG	6 cut(s)	925, 1099, 1385, 1462, 1635, 1802
EcoT14I	CCWWGG	1 cut(s)	1952
EcoT22I	ATGCAT	1 cut(s)	2029
EcoT38I	GRGCYC	2 cut(s)	1362, 1393
ErhI	CCWWGG	1 cut(s)	1952
FalI	AAGNNNNNCTT	4 cut(s)	118, 150, 2373, 2405
FaqI	GGGAC	5 cut(s)	338, 1381, 1480, 1591, 1970
FauNDI	CATATG	1 cut(s)	550
FbaI	TGATCA	2 cut(s)	2449, 2881
FblI	GTMKAC	1 cut(s)	1237
FokI	GGATG	7 cut(s)	254, 677, 846, 1273, 1669, 2294, 2795
FriOI	GRGCYC	2 cut(s)	1362, 1393
GlaI	GCGC	2 cut(s)	390, 1757
GsuI	CTGGAG	1 cut(s)	879
HaeIII	GGCC	8 cut(s)	153, 183, 462, 525, 781, 1391, 1622, 1715
HapII	CCGG	3 cut(s)	465, 597, 1716
HhaI	GCGC	2 cut(s)	391, 1758
Hin6I	GCGC	2 cut(s)	389, 1756
HinP1I	GCGC	2 cut(s)	389, 1756
HincII	GTYRAC	1 cut(s)	355
HindII	GTYRAC	1 cut(s)	355
HindIII	AAGCTT	2 cut(s)	819, 993
HinfI	GANTC	6 cut(s)	115, 632, 698, 734, 1169, 1427
HpaII	CCGG	3 cut(s)	465, 597, 1716
HpyAV	CCTTC	5 cut(s)	141, 552, 944, 1118, 2618
HpyCH4IV	ACGT	1 cut(s)	2001
HpyF10VI	GCNNNNNNNGC	8 cut(s)	150, 391, 911, 1085, 1546, 1654, 1850, 2899
HpyF3I	CTNAG	3 cut(s)	410, 2147, 2337
HpySE526I	ACGT	1 cut(s)	2001
HspAI	GCGC	2 cut(s)	389, 1756
Kpn2I	TCCGGA	1 cut(s)	596
KpnI	GGTACC	3 cut(s)	926, 1100, 2866
Ksp22I	TGATCA	2 cut(s)	2449, 2881
LguI	GCTCTTC	2 cut(s)	1765, 2940
LmnI	GCTCC	8 cut(s)	274, 892, 898, 1066, 1357, 1878, 2133, 2872
LweI	GCATC	4 cut(s)	747, 931, 1186, 1802
MabI	ACCWGGT	2 cut(s)	925, 1099
MaeII	ACGT	1 cut(s)	2001
MfeI	CAATTG	1 cut(s)	2636
MflI	RGATCY	1 cut(s)	1900
MhlI	GDGCHC	4 cut(s)	40, 1362, 1393, 2125
MlsI	TGGCCA	1 cut(s)	1622
MluNI	TGGCCA	1 cut(s)	1622
MlyI	GAGTC	2 cut(s)	109, 1436
MmeI	TCCRAC	2 cut(s)	1404, 1710
Mox20I	TGGCCA	1 cut(s)	1622
Mph1103I	ATGCAT	1 cut(s)	2029
MroI	TCCGGA	1 cut(s)	596
MroXI	GAANNNNTTC	1 cut(s)	429
MscI	TGGCCA	1 cut(s)	1622
MseI	TTAA	4 cut(s)	626, 2004, 2061, 2562
MslI	CAYNNNNRTG	6 cut(s)	1194, 1245, 1437, 1995, 2372, 2656
Msp20I	TGGCCA	1 cut(s)	1622
MspA1I	CMGCKG	2 cut(s)	2278, 2941
MspI	CCGG	3 cut(s)	465, 597, 1716
MspR9I	CCNGG	7 cut(s)	465, 927, 1101, 1387, 1464, 1637, 1804
MunI	CAATTG	1 cut(s)	2636
MvaI	CCWGG	6 cut(s)	927, 1101, 1387, 1464, 1637, 1804
MvnI	CGCG	1 cut(s)	541
MwoI	GCNNNNNNNGC	8 cut(s)	150, 391, 911, 1085, 1546, 1654, 1850, 2899
NciI	CCSGG	1 cut(s)	465
NcoI	CCATGG	1 cut(s)	1952
NdeI	CATATG	1 cut(s)	550
NheI	GCTAGC	2 cut(s)	385, 796
NmuCI	GTSAC	7 cut(s)	92, 953, 1103, 1316, 1428, 1631, 1937
NsiI	ATGCAT	1 cut(s)	2029
NspI	RCATGY	6 cut(s)	81, 333, 1507, 1933, 2316, 2655
PaeI	GCATGC	1 cut(s)	81
PaeR7I	CTCGAG	1 cut(s)	369
PciI	ACATGT	3 cut(s)	1503, 2312, 2651
PciSI	GCTCTTC	2 cut(s)	1765, 2940
PdmI	GAANNNNTTC	1 cut(s)	429
PfeI	GAWTC	4 cut(s)	632, 698, 734, 1169
PflMI	CCANNNNNTGG	1 cut(s)	2752
PfoI	TCCNGGA	1 cut(s)	1802
PleI	GAGTC	2 cut(s)	109, 1435
PpsI	GAGTC	2 cut(s)	109, 1435
PscI	ACATGT	3 cut(s)	1503, 2312, 2651
Psp124BI	GAGCTC	1 cut(s)	1362
Psp6I	CCWGG	6 cut(s)	925, 1099, 1385, 1462, 1635, 1802
PspEI	GGTNACC	1 cut(s)	1103
PspGI	CCWGG	6 cut(s)	925, 1099, 1385, 1462, 1635, 1802
PspOMI	GGGCCC	1 cut(s)	1389
PspPI	GGNCC	7 cut(s)	151, 461, 545, 779, 1389, 1390, 2718
PspXI	VCTCGAGB	1 cut(s)	369
PsuI	RGATCY	1 cut(s)	1900
PvuII	CAGCTG	2 cut(s)	2278, 2941
RseI	CAYNNNNRTG	6 cut(s)	1194, 1245, 1437, 1995, 2372, 2656
SacI	GAGCTC	1 cut(s)	1362
SapI	GCTCTTC	2 cut(s)	1765, 2940
SaqAI	TTAA	4 cut(s)	626, 2004, 2061, 2562
Sau96I	GGNCC	7 cut(s)	151, 461, 545, 779, 1389, 1390, 2718
ScaI	AGTACT	4 cut(s)	1573, 1675, 2422, 2854
SchI	GAGTC	2 cut(s)	109, 1436
ScrFI	CCNGG	7 cut(s)	465, 927, 1101, 1387, 1464, 1637, 1804
SduI	GDGCHC	4 cut(s)	40, 1362, 1393, 2125
SexAI	ACCWGGT	2 cut(s)	925, 1099
SfaNI	GCATC	4 cut(s)	747, 931, 1186, 1802
SfcI	CTRYAG	1 cut(s)	138
Sfr274I	CTCGAG	1 cut(s)	369
SinI	GGWCC	2 cut(s)	545, 2718
SlaI	CTCGAG	1 cut(s)	369
SmiMI	CAYNNNNRTG	6 cut(s)	1194, 1245, 1437, 1995, 2372, 2656
SmlI	CTYRAG	6 cut(s)	293, 360, 369, 849, 1023, 2428
SmoI	CTYRAG	6 cut(s)	293, 360, 369, 849, 1023, 2428
SpeI	ACTAGT	1 cut(s)	1628
SphI	GCATGC	1 cut(s)	81
SsiI	CCGC	1 cut(s)	154
SstI	GAGCTC	1 cut(s)	1362
StyD4I	CCNGG	7 cut(s)	463, 925, 1099, 1385, 1462, 1635, 1802
StyI	CCWWGG	1 cut(s)	1952
TaiI	ACGT	1 cut(s)	2004
TaqI	TCGA	7 cut(s)	230, 370, 620, 939, 1113, 2714, 2732
TaqII	GACCGA	1 cut(s)	544
TauI	GCSGC	1 cut(s)	156
TfiI	GAWTC	4 cut(s)	632, 698, 734, 1169
Tru1I	TTAA	4 cut(s)	626, 2004, 2061, 2562
Tru9I	TTAA	4 cut(s)	626, 2004, 2061, 2562
TscAI	CASTG	6 cut(s)	1171, 1258, 1483, 1594, 1894, 2815
TseFI	GTSAC	7 cut(s)	92, 953, 1103, 1316, 1428, 1631, 1937
Tsp45I	GTSAC	7 cut(s)	92, 953, 1103, 1316, 1428, 1631, 1937
TspGWI	ACGGA	1 cut(s)	1427
TspRI	CASTG	6 cut(s)	1171, 1258, 1483, 1594, 1894, 2815
Van91I	CCANNNNNTGG	1 cut(s)	2752
VpaK11BI	GGWCC	2 cut(s)	545, 2718
XapI	RAATTY	3 cut(s)	42, 772, 2476
XbaI	TCTAGA	1 cut(s)	1924
XceI	RCATGY	6 cut(s)	81, 333, 1507, 1933, 2316, 2655
XhoI	CTCGAG	1 cut(s)	369
XmiI	GTMKAC	1 cut(s)	1237
XmnI	GAANNNNTTC	1 cut(s)	429
ZrmI	AGTACT	4 cut(s)	1573, 1675, 2422, 2854
Zsp2I	ATGCAT	1 cut(s)	2029

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.