Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0016297

Physical Location & Seq

Genomic Coordinates Reverse (-)

80420337 .. 80425446

Gene Structure 5110 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000036422

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3141 bp

ATGGAAAGTGGAGGTGAGGTAAAACGAAGAAAGAGTGCCCGAATTTCAGCATTAGAGGAGGAAAAGAGGAAAAAAGCATGCACCGTAGAAAGTGATAATGTTAGCGAGGATCAGACTCATGTTAGAAGAGGAACTTCTACAGGCAGGAGGGGCCGCAAGCGAAAAAGACTTGAAGATGTTGGCCTATCATCTCCACAGGATAGTGAAGACCCAAAAGATGAAGATTATTCGATCTACGAGGATGAAGCAGCATATCTGTCATATATACAGGAGGAGCCTGAAACTCGGATACTTGAGTTTATCCTTGATATACTGCAAAGGAGGGACACATGCAACTTATTCTCAAAGCCTGTTGACCCTCAAGAGGTTTGGACCTATTACAGGATTATTAAAGAGCCAATGGATTTTGGAACCATAAGGACAAAACTTCAGGAAGGAAAATATACAAACTTACAACAGTTTGAGCATGATGTGCTTCAAATATCCGCCAATGCAATGCACTTCAATTCATCGACCACCGTTTTTTACCAAGAGGCTCGAGCTATACAAGAGCTAGCGCAGCAGCTTTTCCAATCTCTAAGAGCTGATCCAGAACAGTTTCAGTTACAATTCTTACTGACAAAAAGAGGCCCTGGTAGGAAGCCGCAAAATCAAGGCAGAGGTTCACATAGAAGCGTTCCTAGACCAGTTGGCCGACCGAGTTCCTCGTGTGGTCCATATGCTAGAAGGAAAAGTCAAGCAGGCTCATCTAATGCAAACTCTTCCGGAATGAGAAATGGTAGAAACTCGAACTTAATGGAATCAGAGAGGCGTGAAACTTATAGGCTTTCAGATGAGGATAAATCACTATTATCAGTTGTCCATGATTCTGCAAAGATACTTCTTCACGTTGATAATGGTGATTCTGGATATAAAGAAAGTTTGATGCAGTTTGCTAAAAATTTGGGGCCAACAGCTCAAATGTTAGCCGAAAGTAAGTTGGTACAAGCTTTCAGCCAACCTCCGAATTGCCAGCCTCAAGCCACTCATCCAATACAAACCCAGAACTACATGGCTCCTGCTCCAGTCCTAGCTTTGCCAGCACCAGAGGTACCTGGTCACCTTCTCGATGCTAACAATGGTCACATACATCGTAGTTCCCCATATTACGTGCCCAACAGTGATTCAAGTGAAAGTAAGTTGGCACAAACTTTCAGCCAACCTCCGAATTGCCAGCCTCAAGCCAACTATCCAATACAGAGCCAAAACTACATGGCTCCTGCACCAGTCCTAGCTTTGCCAGCACCGGAGGTACCTGGTCACCTTCTCGATGGTAACAATGGTCAAATACATCGTGGTTCCCCATATTACTTGCCCAACAGTGATTCAAGTGCTTCATATTTTCACGGTGATGCTTCTGCACAAGGATACGCAAGAGCCAGCAATGGTGGTATACATATCAATGACAGTGCTAACAGGAGAAACATGAACCCTCCTAGCACATCCCAGTTAGGTATGGTTCCGAACTATCGTGACAAGGGAAAAATGGTTGTTGATCTAAATCAAAGCATGGAGCTCGTAGGGACTGATGTTACAGAAGCCAGGGCCCATTCTCAAAATGTAAACAGCAATGTTCGGTTGGAGTCACATATCCGTGTTGTTAGAGATTTCAGTAGTCCTGGGACTTCAAGCAGTGGCATGAAGTTCAGGGCTGTGGACATGTTGGGCAAGCCTAACCCCCTAGAAAACCAGCAGCAGTTTCAGCAAGCTCATCAGTTGCCTAGTAGTACTGGGACTTCAAACAGTGGCATACTCTCTTGGGCCGTGAATAGGTTGGCCAACACTAGTCGCCAGGAAAACCAGCAGCTTCAGCCAGCTCAGTTGTCTAGTACTGGATCATCCAACCAGTCAAGTTTACTAGAGATCATGGCCGGAAGAAGTACCTATTTGAAGCCATCATCATCTTCGTTGCGCTCTTCATCTGCAATGTTATCAAGTTTGAGTGAGGCATCAACCTCCTGGAATAATTTTGGCTCACACCTGAACAACAACAATGCAGCTAAATCTGCGGAGACAGGTCAGCAGCTTCAATGGAGCCAACGCAGTGCAGAACAAGATCTGCAAGAAAATTGTAGCTTTCTAGAAATGCTTGGTGACGGCTGTAACCCATGGGACAAGAGTAGTACACTTCTGAGAAACGAACAACATCTTGATGACGTTAATTATTCTTTGGGAAGTAATGCATTTATGAGAAATGAACAACAGCTTGGAGAGGTTAATTGTCAATCGGGGAACAGTACATCAATGAGAACTGAACAACTGTTTGGTGAGGGTGGTGCTCAATGGGGGAGCAATACATTTCTGAGGAAAGAACAACATGTTGCCGACAGTAACTTTCCTCCGGAAAACAATACATTTTTGAGGAAAGAACAACAGCTCAATGGGGGTAACTTTCTGTTGGGGAATGGTACATTTATGAGGAAAGAGCAACAGCTGGATGTGGAGAACTTTCACTTGGGGAATAGTACATGTTTGAGTAAAGAGAAACAGCCTGAGAATGGCAACTTCCAAGTGGGAAATAGCACATTTATGAGGAAAGACCAACTTGACGAAGCTAATTTCCAATTTGGGAATAGTACTTTCTTGAGGACAGCACAACAGTTTGATCAGGGTACTCTTCTACTGGGGAAGACTCCATTTATGAGCAAAGAACCACAGCTTGATCGTGGTAATGTTCAAATGGGGAATAGTACATTTATGAGCAAAGAACAACTGCTTAATGAGGGTACTTTCAGACAGGGGAACAGTACCTTTTTGAGCAGAGGACAACAACTTGGTGAAGGTTCTTTTCAATTGGGGAACAGTACATGTATGTGGACAGAGCAACAGATTGATGAGGTCAATCACCAATGGTGGAATAGTACATTTTCGAGGACTAGTACATTTTCGAGGATAGACCACCAATATCTGGGGAGGAGTGAACAACAGCAGCCTGTGGATGAGGGAGTAATACCTGACTGGTACAGTGCAATATGTTCTGCCAATGAAAGAGCTACTAGTAGTAGTAGTACTCAATGGTACCAAAAGGAGCCTATTGATCAATCTTTGCTGCCCTTGCTCTTGGTGGACAATCAGCAGCCTAACTTGGCTCTTCAGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

1047

Amino Acids

116.74

Weight (kDa)

6.02

Isoelectric Point (pI)

55.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	99 - 180	1.3e-20	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016297)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g41110
malus_domestica	MD03G1047400.v1.1 MD11G1049900.v1.1
pyrus_communis	pycom11g04050
rosa_chinensis	RchiOBHm_Chr5g0073891
rosa_laevigata	RLG00000036422
rosa_multiflora	Rmu_co8433661.1_g000001 Rmu_sc0000470.1_g000015
rosa_roxburghii	Rroxscaffold_1G00007480
rosa_rugosa	Rorug05G0427100
rosa_samantha	Rh5AG484100 Rh5BG504800 Rh5CG528600 Rh5DG517100
rosa_wichuraiana	Rw5G045000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	3 cut(s)	1090, 1291, 3057
AccB1I	GGYRCC	3 cut(s)	1090, 1291, 3057
AccB7I	CCANNNNNTGG	1 cut(s)	2947
AccI	GTMKAC	1 cut(s)	1432
AccIII	TCCGGA	2 cut(s)	764, 2380
AciI	CCGC	4 cut(s)	154, 486, 644, 2048
AclWI	GGATC	3 cut(s)	117, 581, 1882
AcoI	YGGCCR	3 cut(s)	691, 1815, 1908
AcsI	RAATTY	2 cut(s)	42, 940
AcuI	CTGAAG	3 cut(s)	413, 1832, 3116
AfiI	CCNNNNNNNGG	5 cut(s)	364, 381, 1809, 2537, 2947
AflIII	ACRYGT	4 cut(s)	1698, 2356, 2507, 2846
AhlI	ACTAGT	3 cut(s)	1823, 2915, 3035
AjnI	CCWGG	7 cut(s)	631, 1093, 1294, 1580, 1657, 1830, 1997
AjuI	GAANNNNNNNTTGG	6 cut(s)	2229, 2261, 2286, 2318, 2477, 2509
Alw21I	GWGCWC	2 cut(s)	1557, 2320
Alw26I	GTCTC	1 cut(s)	2045
AlwI	GGATC	3 cut(s)	117, 581, 1882
Ama87I	CYCGRG	1 cut(s)	537
Aor13HI	TCCGGA	2 cut(s)	764, 2380
AoxI	GGCC	9 cut(s)	151, 181, 628, 691, 947, 1584, 1800, 1815, 1908
ApaI	GGGCCC	1 cut(s)	1588
ApoI	RAATTY	2 cut(s)	42, 940
Asp700I	GAANNNNTTC	1 cut(s)	597
Asp718I	GGTACC	3 cut(s)	1090, 1291, 3057
AspLEI	GCGC	2 cut(s)	559, 1953
AspS9I	GGNCC	8 cut(s)	151, 372, 629, 713, 947, 1584, 1585, 1800
AsuHPI	GGTGA	9 cut(s)	26, 911, 1091, 1292, 1400, 2144, 2318, 2828, 2876
AsuNHI	GCTAGC	1 cut(s)	553
AvaI	CYCGRG	1 cut(s)	537
AvaII	GGWCC	2 cut(s)	372, 713
BaeGI	GKGCMC	3 cut(s)	40, 1155, 1588
BaeI	ACNNNNGTAYC	2 cut(s)	281, 314
BalI	TGGCCA	1 cut(s)	1817
BanI	GGYRCC	3 cut(s)	1090, 1291, 3057
BanII	GRGCYC	2 cut(s)	1557, 1588
BarI	GAAGNNNNNNTAC	2 cut(s)	1759, 1791
BauI	CACGAG	1 cut(s)	706
BbsI	GAAGAC	2 cut(s)	213, 2675
Bbv12I	GWGCWC	2 cut(s)	1557, 2320
BccI	CCATC	2 cut(s)	1304, 1942
BceAI	ACGGC	2 cut(s)	1787, 2152
BcgI	CGANNNNNNTGC	2 cut(s)	1537, 1571
BciT130I	CCWGG	7 cut(s)	633, 1095, 1296, 1582, 1659, 1832, 1999
BciVI	GTATCC	2 cut(s)	282, 1400
BclI	TGATCA	2 cut(s)	2644, 3076
BcoDI	GTCTC	1 cut(s)	2045
BcuI	ACTAGT	3 cut(s)	1823, 2915, 3035
BfmI	CTRYAG	1 cut(s)	138
BfuI	GTATCC	2 cut(s)	282, 1400
BglII	AGATCT	1 cut(s)	2095
BmcAI	AGTACT	4 cut(s)	1768, 1870, 2617, 3049
Bme1390I	CCNGG	7 cut(s)	633, 1095, 1296, 1582, 1659, 1832, 1999
Bme18I	GGWCC	2 cut(s)	372, 713
BmeT110I	CYCGRG	1 cut(s)	537
BmgT120I	GGNCC	8 cut(s)	151, 372, 629, 713, 947, 1584, 1585, 1800
BmrFI	CCNGG	7 cut(s)	633, 1095, 1296, 1582, 1659, 1832, 1999
BmrI	ACTGGG	3 cut(s)	1480, 1779, 2672
BmsI	GCATC	4 cut(s)	915, 1099, 1381, 1997
BmtI	GCTAGC	1 cut(s)	557
BmuI	ACTGGG	3 cut(s)	1480, 1779, 2672
BpiI	GAAGAC	2 cut(s)	213, 2675
BpmI	CTGGAG	1 cut(s)	1047
BpuEI	CTTGAG	5 cut(s)	314, 345, 1002, 1203, 2644
BsaAI	YACGTR	1 cut(s)	1150
BsaBI	GATNNNNATC	1 cut(s)	1539
BsaJI	CCNNGG	4 cut(s)	631, 1581, 1658, 2147
BsaWI	WCCGGW	3 cut(s)	764, 1285, 2380
BsaXI	ACNNNNNCTCC	1 cut(s)	33
Bsc4I	CCNNNNNNNGG	5 cut(s)	364, 381, 1809, 2537, 2947
Bse1I	ACTGG	9 cut(s)	686, 1064, 1265, 1486, 1774, 1876, 1885, 2667, 3002
Bse3DI	GCAATG	4 cut(s)	501, 1429, 1615, 1971
Bse8I	GATNNNNATC	1 cut(s)	1539
BseAI	TCCGGA	2 cut(s)	764, 2380
BseBI	CCWGG	7 cut(s)	633, 1095, 1296, 1582, 1659, 1832, 1999
BseDI	CCNNGG	4 cut(s)	631, 1581, 1658, 2147
BseGI	GGATG	6 cut(s)	247, 1027, 1481, 1877, 2482, 2983
BseJI	GATNNNNATC	1 cut(s)	1539
BseLI	CCNNNNNNNGG	5 cut(s)	364, 381, 1809, 2537, 2947
BseMI	GCAATG	4 cut(s)	501, 1429, 1615, 1971
BseMII	CTCAG	4 cut(s)	1871, 2162, 2333, 2523
BseNI	ACTGG	9 cut(s)	686, 1064, 1265, 1486, 1774, 1876, 1885, 2667, 3002
BseRI	GAGGAG	3 cut(s)	71, 287, 2968
BseSI	GKGCMC	3 cut(s)	40, 1155, 1588
BsgI	GTGCAG	3 cut(s)	1245, 1383, 2106
Bsh1285I	CGRYCG	1 cut(s)	698
BshFI	GGCC	9 cut(s)	153, 183, 630, 693, 949, 1586, 1802, 1817, 1910
BshNI	GGYRCC	3 cut(s)	1090, 1291, 3057
BsiEI	CGRYCG	1 cut(s)	698
BsiHKAI	GWGCWC	2 cut(s)	1557, 2320
BsiHKCI	CYCGRG	1 cut(s)	537
BsiSI	CCGG	4 cut(s)	765, 1286, 1911, 2381
BslFI	GGGAC	5 cut(s)	338, 1576, 1675, 1786, 2165
BslI	CCNNNNNNNGG	5 cut(s)	364, 381, 1809, 2537, 2947
BsmAI	GTCTC	1 cut(s)	2045
BsmFI	GGGAC	5 cut(s)	338, 1576, 1675, 1786, 2165
BsnI	GGCC	9 cut(s)	153, 183, 630, 693, 949, 1586, 1802, 1817, 1910
BsoBI	CYCGRG	1 cut(s)	537
Bsp120I	GGGCCC	1 cut(s)	1584
Bsp1286I	GDGCHC	5 cut(s)	40, 1155, 1557, 1588, 2320
Bsp13I	TCCGGA	2 cut(s)	764, 2380
Bsp19I	CCATGG	1 cut(s)	2147
BspACI	CCGC	4 cut(s)	154, 486, 644, 2048
BspANI	GGCC	9 cut(s)	153, 183, 630, 693, 949, 1586, 1802, 1817, 1910
BspCNI	CTCAG	4 cut(s)	1870, 2163, 2334, 2524
BspEI	TCCGGA	2 cut(s)	764, 2380
BspOI	GCTAGC	1 cut(s)	557
BspPI	GGATC	3 cut(s)	117, 581, 1882
BspQI	GCTCTTC	2 cut(s)	1960, 3135
BspT107I	GGYRCC	3 cut(s)	1090, 1291, 3057
BsrDI	GCAATG	4 cut(s)	501, 1429, 1615, 1971
BsrI	ACTGG	9 cut(s)	686, 1064, 1265, 1486, 1774, 1876, 1885, 2667, 3002
BssECI	CCNNGG	4 cut(s)	631, 1581, 1658, 2147
BssNAI	GTATAC	1 cut(s)	1433
BssSI	CACGAG	1 cut(s)	706
BssT1I	CCWWGG	1 cut(s)	2147
Bst1107I	GTATAC	1 cut(s)	1433
Bst2BI	CACGAG	1 cut(s)	706
Bst2UI	CCWGG	7 cut(s)	633, 1095, 1296, 1582, 1659, 1832, 1999
Bst6I	CTCTTC	5 cut(s)	121, 766, 1960, 2661, 3135
BstAPI	GCANNNNNTGC	1 cut(s)	472
BstBAI	YACGTR	1 cut(s)	1150
BstDEI	CTNAG	5 cut(s)	578, 1857, 2171, 2342, 2532
BstDSI	CCRYGG	1 cut(s)	2147
BstEII	GGTNACC	2 cut(s)	1097, 1298
BstENI	CCTNNNNNAGG	1 cut(s)	379
BstF5I	GGATG	6 cut(s)	247, 1027, 1481, 1877, 2482, 2983
BstHHI	GCGC	2 cut(s)	559, 1953
BstMAI	GTCTC	1 cut(s)	2045
BstMCI	CGRYCG	1 cut(s)	698
BstMWI	GCNNNNNNNGC	9 cut(s)	150, 472, 559, 1079, 1280, 1741, 1849, 2045, 3094
BstNI	CCWGG	7 cut(s)	633, 1095, 1296, 1582, 1659, 1832, 1999
BstNSI	RCATGY	6 cut(s)	81, 333, 1702, 2360, 2511, 2850
BstPI	GGTNACC	2 cut(s)	1097, 1298
BstSCI	CCNGG	7 cut(s)	631, 1093, 1294, 1580, 1657, 1830, 1997
BstSFI	CTRYAG	1 cut(s)	138
BstSLI	GKGCMC	3 cut(s)	40, 1155, 1588
BstV2I	GAAGAC	2 cut(s)	213, 2675
BstX2I	RGATCY	1 cut(s)	2095
BstYI	RGATCY	1 cut(s)	2095
BstZ17I	GTATAC	1 cut(s)	1433
BsuI	GTATCC	2 cut(s)	282, 1400
BsuRI	GGCC	9 cut(s)	153, 183, 630, 693, 949, 1586, 1802, 1817, 1910
BtgI	CCRYGG	1 cut(s)	2147
BtsCI	GGATG	6 cut(s)	247, 1027, 1481, 1877, 2482, 2983
BtsI	GCAGTG	2 cut(s)	1678, 2089
BtsIMutI	CAGTG	7 cut(s)	1165, 1366, 1453, 1678, 1789, 2089, 3010
CfoI	GCGC	2 cut(s)	559, 1953
Cfr13I	GGNCC	8 cut(s)	151, 372, 629, 713, 947, 1584, 1585, 1800
CsiI	ACCWGGT	2 cut(s)	1093, 1294
DdeI	CTNAG	5 cut(s)	578, 1857, 2171, 2342, 2532
EaeI	YGGCCR	3 cut(s)	691, 1815, 1908
Eam1104I	CTCTTC	5 cut(s)	121, 766, 1960, 2661, 3135
EarI	CTCTTC	5 cut(s)	121, 766, 1960, 2661, 3135
EciI	GGCGGA	1 cut(s)	475
Ecl136II	GAGCTC	1 cut(s)	1555
Eco130I	CCWWGG	1 cut(s)	2147
Eco24I	GRGCYC	2 cut(s)	1557, 1588
Eco47I	GGWCC	2 cut(s)	372, 713
Eco53kI	GAGCTC	1 cut(s)	1555
Eco57I	CTGAAG	3 cut(s)	413, 1832, 3116
Eco88I	CYCGRG	1 cut(s)	537
Eco91I	GGTNACC	2 cut(s)	1097, 1298
EcoICRI	GAGCTC	1 cut(s)	1555
EcoNI	CCTNNNNNAGG	1 cut(s)	379
EcoO109I	RGGNCCY	2 cut(s)	629, 1584
EcoO65I	GGTNACC	2 cut(s)	1097, 1298
EcoRII	CCWGG	7 cut(s)	631, 1093, 1294, 1580, 1657, 1830, 1997
EcoT14I	CCWWGG	1 cut(s)	2147
EcoT22I	ATGCAT	1 cut(s)	2224
EcoT38I	GRGCYC	2 cut(s)	1557, 1588
ErhI	CCWWGG	1 cut(s)	2147
FalI	AAGNNNNNCTT	4 cut(s)	118, 150, 2568, 2600
FaqI	GGGAC	5 cut(s)	338, 1576, 1675, 1786, 2165
FauNDI	CATATG	1 cut(s)	718
FbaI	TGATCA	2 cut(s)	2644, 3076
FblI	GTMKAC	1 cut(s)	1432
FokI	GGATG	6 cut(s)	254, 1014, 1468, 1864, 2489, 2990
FriOI	GRGCYC	2 cut(s)	1557, 1588
GlaI	GCGC	2 cut(s)	558, 1952
GsuI	CTGGAG	1 cut(s)	1047
HaeIII	GGCC	9 cut(s)	153, 183, 630, 693, 949, 1586, 1802, 1817, 1910
HapII	CCGG	4 cut(s)	765, 1286, 1911, 2381
HhaI	GCGC	2 cut(s)	559, 1953
Hin6I	GCGC	2 cut(s)	557, 1951
HinP1I	GCGC	2 cut(s)	557, 1951
HincII	GTYRAC	1 cut(s)	355
HindII	GTYRAC	1 cut(s)	355
HindIII	AAGCTT	1 cut(s)	987
HinfI	GANTC	8 cut(s)	115, 800, 866, 902, 1163, 1364, 1622, 2671
HpaII	CCGG	4 cut(s)	765, 1286, 1911, 2381
HphI	GGTGA	9 cut(s)	26, 911, 1091, 1292, 1400, 2144, 2318, 2828, 2876
HpyAV	CCTTC	5 cut(s)	428, 720, 1112, 1313, 2813
HpyCH4IV	ACGT	3 cut(s)	888, 1149, 2196
HpyF10VI	GCNNNNNNNGC	9 cut(s)	150, 472, 559, 1079, 1280, 1741, 1849, 2045, 3094
HpyF3I	CTNAG	5 cut(s)	578, 1857, 2171, 2342, 2532
HpySE526I	ACGT	3 cut(s)	888, 1149, 2196
HspAI	GCGC	2 cut(s)	557, 1951
Kpn2I	TCCGGA	2 cut(s)	764, 2380
KpnI	GGTACC	3 cut(s)	1094, 1295, 3061
Ksp22I	TGATCA	2 cut(s)	2644, 3076
LguI	GCTCTTC	2 cut(s)	1960, 3135
LmnI	GCTCC	8 cut(s)	274, 1060, 1066, 1261, 1552, 2073, 2328, 3067
LweI	GCATC	4 cut(s)	915, 1099, 1381, 1997
MabI	ACCWGGT	2 cut(s)	1093, 1294
MaeII	ACGT	3 cut(s)	888, 1149, 2196
MfeI	CAATTG	1 cut(s)	2831
MflI	RGATCY	1 cut(s)	2095
MhlI	GDGCHC	5 cut(s)	40, 1155, 1557, 1588, 2320
MlsI	TGGCCA	1 cut(s)	1817
MluNI	TGGCCA	1 cut(s)	1817
MlyI	GAGTC	3 cut(s)	109, 1631, 2665
MmeI	TCCRAC	2 cut(s)	1599, 1905
Mox20I	TGGCCA	1 cut(s)	1817
Mph1103I	ATGCAT	1 cut(s)	2224
MroI	TCCGGA	2 cut(s)	764, 2380
MroXI	GAANNNNTTC	1 cut(s)	597
MscI	TGGCCA	1 cut(s)	1817
MseI	TTAA	5 cut(s)	390, 794, 2199, 2256, 2757
MslI	CAYNNNNRTG	6 cut(s)	1389, 1440, 1632, 2190, 2567, 2851
Msp20I	TGGCCA	1 cut(s)	1817
MspA1I	CMGCKG	2 cut(s)	2473, 3136
MspI	CCGG	4 cut(s)	765, 1286, 1911, 2381
MspR9I	CCNGG	7 cut(s)	633, 1095, 1296, 1582, 1659, 1832, 1999
MunI	CAATTG	1 cut(s)	2831
MvaI	CCWGG	7 cut(s)	633, 1095, 1296, 1582, 1659, 1832, 1999
MwoI	GCNNNNNNNGC	9 cut(s)	150, 472, 559, 1079, 1280, 1741, 1849, 2045, 3094
NcoI	CCATGG	1 cut(s)	2147
NdeI	CATATG	1 cut(s)	718
NheI	GCTAGC	1 cut(s)	553
NmuCI	GTSAC	6 cut(s)	1097, 1121, 1298, 1511, 1623, 2132
NsiI	ATGCAT	1 cut(s)	2224
NspI	RCATGY	6 cut(s)	81, 333, 1702, 2360, 2511, 2850
PaeI	GCATGC	1 cut(s)	81
PaeR7I	CTCGAG	1 cut(s)	537
PciI	ACATGT	4 cut(s)	1698, 2356, 2507, 2846
PciSI	GCTCTTC	2 cut(s)	1960, 3135
PdmI	GAANNNNTTC	1 cut(s)	597
PfeI	GAWTC	5 cut(s)	800, 866, 902, 1163, 1364
PflMI	CCANNNNNTGG	1 cut(s)	2947
PfoI	TCCNGGA	1 cut(s)	1997
PleI	GAGTC	3 cut(s)	109, 1630, 2665
PpsI	GAGTC	3 cut(s)	109, 1630, 2665
Ppu21I	YACGTR	1 cut(s)	1150
PscI	ACATGT	4 cut(s)	1698, 2356, 2507, 2846
Psp124BI	GAGCTC	1 cut(s)	1557
Psp6I	CCWGG	7 cut(s)	631, 1093, 1294, 1580, 1657, 1830, 1997
PspEI	GGTNACC	2 cut(s)	1097, 1298
PspGI	CCWGG	7 cut(s)	631, 1093, 1294, 1580, 1657, 1830, 1997
PspOMI	GGGCCC	1 cut(s)	1584
PspPI	GGNCC	8 cut(s)	151, 372, 629, 713, 947, 1584, 1585, 1800
PspXI	VCTCGAGB	1 cut(s)	537
PsuI	RGATCY	1 cut(s)	2095
PvuII	CAGCTG	2 cut(s)	2473, 3136
RseI	CAYNNNNRTG	6 cut(s)	1389, 1440, 1632, 2190, 2567, 2851
SacI	GAGCTC	1 cut(s)	1557
SapI	GCTCTTC	2 cut(s)	1960, 3135
SaqAI	TTAA	5 cut(s)	390, 794, 2199, 2256, 2757
Sau96I	GGNCC	8 cut(s)	151, 372, 629, 713, 947, 1584, 1585, 1800
ScaI	AGTACT	4 cut(s)	1768, 1870, 2617, 3049
SchI	GAGTC	3 cut(s)	109, 1631, 2665
ScrFI	CCNGG	7 cut(s)	633, 1095, 1296, 1582, 1659, 1832, 1999
SduI	GDGCHC	5 cut(s)	40, 1155, 1557, 1588, 2320
SexAI	ACCWGGT	2 cut(s)	1093, 1294
SfaNI	GCATC	4 cut(s)	915, 1099, 1381, 1997
SfcI	CTRYAG	1 cut(s)	138
Sfr274I	CTCGAG	1 cut(s)	537
SinI	GGWCC	2 cut(s)	372, 713
SlaI	CTCGAG	1 cut(s)	537
SmiMI	CAYNNNNRTG	6 cut(s)	1389, 1440, 1632, 2190, 2567, 2851
SmlI	CTYRAG	6 cut(s)	293, 360, 537, 1017, 1218, 2623
SmoI	CTYRAG	6 cut(s)	293, 360, 537, 1017, 1218, 2623
SpeI	ACTAGT	3 cut(s)	1823, 2915, 3035
SphI	GCATGC	1 cut(s)	81
SsiI	CCGC	4 cut(s)	154, 486, 644, 2048
SstI	GAGCTC	1 cut(s)	1557
StyD4I	CCNGG	7 cut(s)	631, 1093, 1294, 1580, 1657, 1830, 1997
StyI	CCWWGG	1 cut(s)	2147
TaiI	ACGT	3 cut(s)	891, 1152, 2199
TaqI	TCGA	8 cut(s)	230, 512, 538, 788, 1107, 1308, 2909, 2927
TaqII	GACCGA	1 cut(s)	712
TauI	GCSGC	2 cut(s)	156, 646
TfiI	GAWTC	5 cut(s)	800, 866, 902, 1163, 1364
Tru1I	TTAA	5 cut(s)	390, 794, 2199, 2256, 2757
Tru9I	TTAA	5 cut(s)	390, 794, 2199, 2256, 2757
TscAI	CASTG	7 cut(s)	1165, 1366, 1453, 1678, 1789, 2089, 3010
TseFI	GTSAC	6 cut(s)	1097, 1121, 1298, 1511, 1623, 2132
Tsp45I	GTSAC	6 cut(s)	1097, 1121, 1298, 1511, 1623, 2132
TspDTI	ATGAA	9 cut(s)	234, 258, 498, 1365, 1481, 1694, 1947, 2250, 3039
TspGWI	ACGGA	1 cut(s)	1622
TspRI	CASTG	7 cut(s)	1165, 1366, 1453, 1678, 1789, 2089, 3010
Van91I	CCANNNNNTGG	1 cut(s)	2947
VpaK11BI	GGWCC	2 cut(s)	372, 713
XagI	CCTNNNNNAGG	1 cut(s)	379
XapI	RAATTY	2 cut(s)	42, 940
XbaI	TCTAGA	1 cut(s)	2119
XceI	RCATGY	6 cut(s)	81, 333, 1702, 2360, 2511, 2850
XhoI	CTCGAG	1 cut(s)	537
XmiI	GTMKAC	1 cut(s)	1432
XmnI	GAANNNNTTC	1 cut(s)	597
ZrmI	AGTACT	4 cut(s)	1768, 1870, 2617, 3049
Zsp2I	ATGCAT	1 cut(s)	2224

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.