Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0005481

Physical Location & Seq

Genomic Coordinates Forward (+)

35651281 .. 35655265

Gene Structure 3985 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1273200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1584 bp

ATGAAGCGAGTTTGGAAGCTATCCGACGCCGCCCAATCTGAGCTCCTCTCCCGTCACAGATCCTCCGCTGCCGCCACCGCCTCCAAAACCCTACAACACCCCCCCTACGCTTTCACCCTCACCAACTCCCCAAGTTACAGATTAACCCGCGACGTCAATGCTCAGACCCACTCCTCCTCCGCCGCCGCCCCGTCTTCTTCTTCTCCGCTCATCTCCATGTCGAGCATCATTGACTTGTTCAGAGACAAGCCCTCGCCGCAAGACCTGAGGGCCAGGGAGGATCTGGCCCGGACGGCGTCGGAGTTGAGGGACGAATTGGTTCGGAATATTGGGGATTCTGAGAAGATTGTTAGGGTTTTGGAAGAGAAGGGATGCTCCTCCCTGTGGGAATGGAAGGACGGATTGGGTGTCGTTGAGCTTCTGAATCAGCTGTGTTCGTGGCCTCAATTGGCTCTGGAGGTTTTTGAGTGGAGAAGACAGCAGGTTGCTAGTAGCACTTCTATGAGTGCAGAGGAATATGCCAAGGCTATTATAATAGCTGGTAAAGCTAAGAATGTAGAACTTGCCCTTGAGTTATTTACTGAGGCTATAAACAAGCGGATCAAGACAACTTCTATTTATAATGCACTGATGAGTGCCTATATGTTCAATGGTCATACTGCTAAATGTCAGTCTTTGTTTCGGGACCTCAAGAAGGAACCAGATTGCTGTCCTACTATTGTAACGTACAACATTCTTATTTCTGTATTTGGTCGTTTGATGCTGGTTGACCATATGGAGGCAACAGTCCGGGGTTTAAAGGATTTAGGTTTGTCGCCTAATTTAAGCACATACAATCATTTGATTGCTGGATATGTAACAGCTTGGATGTGGAATAGTATGGAAAAAACTTTCCAAAAGATGAAGGAGGGCCCTGTTAGTCCCGATATTAGCACCCACTTGCTAATGCTTCGAGGGTATGCTCATTCAGGTAATTTGGCAAAGATGGAGGAAACATATGAGTTGGTAAAACATCACGTAGACGATAAGGAAATGCCATTGATAAGAGCTATGATATGTGCATATTGCAAGAGTTCTGTGACAGACAAAGTGGAAAAGATTCACAAACTAATGAAACTTATACCAGAAAATGAATATAGACCTTGGTTGAATGTGAATCTGATTAAAGTTTATGCTCAAGAGAATTGCTTGGAGGCGATGGAGAAGTCAATAAATGAGGCATTTGAGCGCAAAACTGCTGTACATACTGCAGGTGTGATGCGATGTATAATTTCAAGTTATTTCCGATGCAATGAAGTGGACAGACTTGAAAGTTTTGTGAAGCGTGCAGAATTTGCTAGGTGGAGAACTTGCAGGTCCCTATATCATTGTCAGTTGGTCATGTATGCAGCACAAAACCGCTTAAAGGAAATGGAGAATGTGCTTATTCAGATGGAGAATTTAAACATGCCCTGTACCAAAAAGACATTCGTGATACTGTACAGAGCCTACTTAATGTGTGGTCAAAGATATAAGGTGGCACAAATACGAGGATTAATGTGGAAGCATGGATATGAAATGCCTTTTGATTCATTGTTATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

528

Amino Acids

60.31

Weight (kDa)

8.88

Isoelectric Point (pI)

44.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	203 - 250	3.5e-09	PPR repeat family
PPR_3	PF13812	206 - 251	1.3e-06	Pentatricopeptide repeat domain
PPR_3	PF13812	264 - 313	1e-05	Pentatricopeptide repeat domain
PPR_2	PF13041	273 - 322	1.3e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30780 AT2G30780
fragaria_vesca	FvH4_2g24360 FvH4_2g24360 FvH4_2g24360 FvH4_2g24360 FvH4_2g24360 FvH4_2g24360 FvH4_2g24360
malus_domestica	MD03G1273200.v1.1 MD11G1295800.v1.1 MD11G1295900.v1.1
prunus_persica	Prupe.8G249700_v2.0.a1 Prupe.8G249700_v2.0.a1
pyrus_communis	pycom03g21770 pycom11g26040
rosa_chinensis	RchiOBHm_Chr6g0292231
rosa_laevigata	RLG00000012051
rosa_multiflora	Rmu_sc0002993.1_g000008 Rmu_sc0015871.1_g000001
rosa_roxburghii	Rroxscaffold_7G00175320
rosa_rugosa	Rorug06G0224500 Rorug06G0224600 Rorug06G0224700
rosa_samantha	Rh6AG337700 Rh6BG345000 Rh6CG352100 Rh6DG338000
rosa_wichuraiana	Rw6G029410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	533, 621
AarI	CACCTGC	1 cut(s)	1241
AatII	GACGTC	1 cut(s)	156
Acc36I	ACCTGC	3 cut(s)	472, 1241, 1344
AccBSI	CCGCTC	1 cut(s)	208
AccI	GTMKAC	1 cut(s)	1020
AccII	CGCG	1 cut(s)	150
AclWI	GGATC	3 cut(s)	54, 288, 608
AcsI	RAATTY	2 cut(s)	1331, 1438
AcyI	GRCGYC	3 cut(s)	27, 153, 296
AfaI	GTAC	4 cut(s)	728, 1242, 1456, 1481
AfiI	CCNNNNNNNGG	4 cut(s)	384, 694, 778, 1405
AgsI	TTSAA	4 cut(s)	649, 1150, 1275, 1310
AjnI	CCWGG	1 cut(s)	272
AjuI	GAANNNNNNNTTGG	4 cut(s)	386, 418, 1451, 1483
AluBI	AGCT	8 cut(s)	19, 43, 418, 430, 539, 548, 863, 1049
AluI	AGCT	8 cut(s)	19, 43, 418, 430, 539, 548, 863, 1049
Alw21I	GWGCWC	1 cut(s)	45
Alw26I	GTCTC	1 cut(s)	237
AlwI	GGATC	3 cut(s)	54, 288, 608
AoxI	GGCC	4 cut(s)	270, 285, 440, 910
ApaI	GGGCCC	1 cut(s)	914
ApeKI	GCWGC	2 cut(s)	68, 1388
ApoI	RAATTY	2 cut(s)	1331, 1438
AseI	ATTAAT	1 cut(s)	1535
Asp700I	GAANNNNTTC	2 cut(s)	318, 1098
AspLEI	GCGC	1 cut(s)	1230
AspS9I	GGNCC	6 cut(s)	270, 286, 685, 910, 911, 1356
AsuC2I	CCSGG	2 cut(s)	289, 791
AsuHPI	GGTGA	2 cut(s)	106, 112
AvaII	GGWCC	2 cut(s)	685, 1356
AxyI	CCTNAGG	1 cut(s)	266
BaeGI	GKGCMC	1 cut(s)	914
BanII	GRGCYC	2 cut(s)	45, 914
BbsI	GAAGAC	2 cut(s)	186, 481
Bbv12I	GWGCWC	1 cut(s)	45
BbvI	GCAGC	2 cut(s)	55, 1400
BccI	CCATC	3 cut(s)	979, 1192, 1426
BceAI	ACGGC	1 cut(s)	309
BcgI	CGANNNNNNTGC	2 cut(s)	140, 174
BciT130I	CCWGG	1 cut(s)	274
BcnI	CCSGG	2 cut(s)	289, 791
BcoDI	GTCTC	1 cut(s)	237
BfaI	CTAG	2 cut(s)	489, 1338
BfmI	CTRYAG	1 cut(s)	1248
BfuAI	ACCTGC	3 cut(s)	472, 1241, 1344
BglI	GCCNNNNNGGC	1 cut(s)	293
BisI	GCNGC	7 cut(s)	30, 69, 72, 183, 186, 257, 1389
BlsI	GCNGC	7 cut(s)	31, 70, 73, 184, 187, 258, 1390
Bme1390I	CCNGG	3 cut(s)	274, 289, 791
Bme18I	GGWCC	2 cut(s)	685, 1356
BmgT120I	GGNCC	6 cut(s)	270, 286, 685, 910, 911, 1356
BmiI	GGNNCC	4 cut(s)	686, 699, 912, 1358
BmrFI	CCNGG	3 cut(s)	274, 289, 791
BmsI	GCATC	5 cut(s)	234, 362, 750, 1248, 1277
BpiI	GAAGAC	2 cut(s)	186, 481
BplI	GAGNNNNNCTC	2 cut(s)	32, 64
BpmI	CTGGAG	1 cut(s)	476
BpuEI	CTTGAG	3 cut(s)	590, 674, 1161
BpuMI	CCSGG	2 cut(s)	289, 791
BsaAI	YACGTR	1 cut(s)	1018
BsaHI	GRCGYC	3 cut(s)	27, 153, 296
BsaJI	CCNNGG	4 cut(s)	273, 522, 790, 1142
BsaXI	ACNNNNNCTCC	4 cut(s)	47, 77, 161, 191
Bsc4I	CCNNNNNNNGG	4 cut(s)	384, 694, 778, 1405
Bse21I	CCTNAGG	1 cut(s)	266
Bse3DI	GCAATG	1 cut(s)	1297
BseBI	CCWGG	1 cut(s)	274
BseDI	CCNNGG	4 cut(s)	273, 522, 790, 1142
BseGI	GGATG	2 cut(s)	377, 873
BseLI	CCNNNNNNNGG	4 cut(s)	384, 694, 778, 1405
BseMI	GCAATG	1 cut(s)	1297
BseMII	CTCAG	5 cut(s)	30, 176, 257, 330, 573
BseRI	GAGGAG	4 cut(s)	35, 163, 166, 367
BseSI	GKGCMC	1 cut(s)	914
BseXI	GCAGC	2 cut(s)	55, 1400
BsgI	GTGCAG	2 cut(s)	528, 1347
Bsh1236I	CGCG	1 cut(s)	150
BshFI	GGCC	4 cut(s)	272, 287, 442, 912
BsiHKAI	GWGCWC	1 cut(s)	45
BsiSI	CCGG	2 cut(s)	289, 790
BslFI	GGGAC	4 cut(s)	323, 698, 906, 1342
BslI	CCNNNNNNNGG	4 cut(s)	384, 694, 778, 1405
BsmAI	GTCTC	1 cut(s)	237
BsmFI	GGGAC	4 cut(s)	323, 698, 906, 1342
BsnI	GGCC	4 cut(s)	272, 287, 442, 912
Bsp120I	GGGCCC	1 cut(s)	910
Bsp1286I	GDGCHC	2 cut(s)	45, 914
Bsp1407I	TGTACA	2 cut(s)	1240, 1479
Bsp143I	GATC	3 cut(s)	59, 280, 600
BspANI	GGCC	4 cut(s)	272, 287, 442, 912
BspCNI	CTCAG	5 cut(s)	31, 175, 258, 331, 574
BspFNI	CGCG	1 cut(s)	150
BspHI	TCATGA	1 cut(s)	1580
BspLI	GGNNCC	4 cut(s)	686, 699, 912, 1358
BspMAI	CTGCAG	1 cut(s)	1252
BspMI	ACCTGC	3 cut(s)	472, 1241, 1344
BspPI	GGATC	3 cut(s)	54, 288, 608
BsrBI	CCGCTC	1 cut(s)	208
BsrDI	GCAATG	1 cut(s)	1297
BsrGI	TGTACA	2 cut(s)	1240, 1479
BssECI	CCNNGG	4 cut(s)	273, 522, 790, 1142
BssMI	GATC	3 cut(s)	59, 280, 600
BssNI	GRCGYC	3 cut(s)	27, 153, 296
BssT1I	CCWWGG	2 cut(s)	522, 1142
Bst2UI	CCWGG	1 cut(s)	274
Bst4CI	ACNGT	2 cut(s)	787, 1479
Bst6I	CTCTTC	1 cut(s)	357
BstACI	GRCGYC	3 cut(s)	27, 153, 296
BstAPI	GCANNNNNTGC	1 cut(s)	1334
BstAUI	TGTACA	2 cut(s)	1240, 1479
BstBAI	YACGTR	1 cut(s)	1018
BstC8I	GCNNGC	1 cut(s)	1326
BstDEI	CTNAG	6 cut(s)	39, 162, 266, 339, 549, 582
BstENI	CCTNNNNNAGG	1 cut(s)	692
BstF5I	GGATG	2 cut(s)	377, 873
BstFNI	CGCG	1 cut(s)	150
BstHHI	GCGC	1 cut(s)	1230
BstKTI	GATC	3 cut(s)	62, 283, 603
BstMAI	GTCTC	1 cut(s)	237
BstMBI	GATC	3 cut(s)	59, 280, 600
BstMWI	GCNNNNNNNGC	5 cut(s)	77, 256, 293, 545, 1334
BstNI	CCWGG	1 cut(s)	274
BstNSI	RCATGY	1 cut(s)	1450
BstSCI	CCNGG	3 cut(s)	272, 287, 789
BstSFI	CTRYAG	1 cut(s)	1248
BstSLI	GKGCMC	1 cut(s)	914
BstUI	CGCG	1 cut(s)	150
BstV1I	GCAGC	2 cut(s)	55, 1400
BstV2I	GAAGAC	2 cut(s)	186, 481
BstX2I	RGATCY	2 cut(s)	59, 280
BstYI	RGATCY	2 cut(s)	59, 280
Bsu36I	CCTNAGG	1 cut(s)	266
BsuRI	GGCC	4 cut(s)	272, 287, 442, 912
BtgZI	GCGATG	2 cut(s)	1211, 1276
BtsCI	GGATG	2 cut(s)	377, 873
BtsIMutI	CAGTG	1 cut(s)	626
BveI	ACCTGC	3 cut(s)	472, 1241, 1344
Cac8I	GCNNGC	1 cut(s)	1326
CciI	TCATGA	1 cut(s)	1580
CfoI	GCGC	1 cut(s)	1230
Cfr13I	GGNCC	6 cut(s)	270, 286, 685, 910, 911, 1356
CseI	GACGC	2 cut(s)	35, 285
Csp6I	GTAC	4 cut(s)	727, 1241, 1455, 1480
CviAII	CATG	5 cut(s)	217, 1381, 1447, 1547, 1581
CviQI	GTAC	4 cut(s)	727, 1241, 1455, 1480
DdeI	CTNAG	6 cut(s)	39, 162, 266, 339, 549, 582
DpnI	GATC	3 cut(s)	61, 282, 602
DpnII	GATC	3 cut(s)	59, 280, 600
DraI	TTTAAA	2 cut(s)	798, 1443
Eam1104I	CTCTTC	1 cut(s)	357
EarI	CTCTTC	1 cut(s)	357
EciI	GGCGGA	1 cut(s)	169
Ecl136II	GAGCTC	1 cut(s)	43
Eco130I	CCWWGG	2 cut(s)	522, 1142
Eco24I	GRGCYC	2 cut(s)	45, 914
Eco47I	GGWCC	2 cut(s)	685, 1356
Eco53kI	GAGCTC	1 cut(s)	43
Eco81I	CCTNAGG	1 cut(s)	266
EcoICRI	GAGCTC	1 cut(s)	43
EcoNI	CCTNNNNNAGG	1 cut(s)	692
EcoO109I	RGGNCCY	4 cut(s)	685, 910, 911, 1356
EcoRII	CCWGG	1 cut(s)	272
EcoT14I	CCWWGG	2 cut(s)	522, 1142
EcoT38I	GRGCYC	2 cut(s)	45, 914
ErhI	CCWWGG	2 cut(s)	522, 1142
FaeI	CATG	5 cut(s)	220, 1384, 1450, 1550, 1584
FaqI	GGGAC	4 cut(s)	323, 698, 906, 1342
FatI	CATG	5 cut(s)	216, 1380, 1446, 1546, 1580
FauI	CCCGC	1 cut(s)	155
FauNDI	CATATG	2 cut(s)	774, 997
FblI	GTMKAC	1 cut(s)	1020
Fnu4HI	GCNGC	7 cut(s)	30, 69, 72, 183, 186, 257, 1389
FokI	GGATG	2 cut(s)	384, 880
FriOI	GRGCYC	2 cut(s)	45, 914
Fsp4HI	GCNGC	7 cut(s)	30, 69, 72, 183, 186, 257, 1389
FspBI	CTAG	2 cut(s)	489, 1338
GlaI	GCGC	1 cut(s)	1229
GluI	GCNGC	7 cut(s)	30, 69, 72, 183, 186, 257, 1389
GsuI	CTGGAG	1 cut(s)	476
HaeIII	GGCC	4 cut(s)	272, 287, 442, 912
HapII	CCGG	2 cut(s)	289, 790
HgaI	GACGC	2 cut(s)	35, 285
HhaI	GCGC	1 cut(s)	1230
Hin1I	GRCGYC	3 cut(s)	27, 153, 296
Hin1II	CATG	5 cut(s)	220, 1384, 1450, 1550, 1584
Hin6I	GCGC	1 cut(s)	1228
HinP1I	GCGC	1 cut(s)	1228
HincII	GTYRAC	1 cut(s)	769
HindII	GTYRAC	1 cut(s)	769
HinfI	GANTC	5 cut(s)	335, 424, 1099, 1156, 1568
HpaII	CCGG	2 cut(s)	289, 790
HphI	GGTGA	2 cut(s)	106, 112
Hpy166II	GTNNAC	3 cut(s)	769, 1021, 1300
Hpy188III	TCNNGA	8 cut(s)	455, 604, 683, 691, 923, 1178, 1471, 1581
Hpy8I	GTNNAC	3 cut(s)	769, 1021, 1300
Hpy99I	CGWCG	3 cut(s)	29, 155, 301
HpyAV	CCTTC	4 cut(s)	361, 388, 688, 898
HpyCH4III	ACNGT	2 cut(s)	787, 1479
HpyCH4IV	ACGT	3 cut(s)	153, 725, 1017
HpyCH4V	TGCA	9 cut(s)	509, 626, 1061, 1068, 1250, 1290, 1328, 1353, 1388
HpyF10VI	GCNNNNNNNGC	5 cut(s)	77, 256, 293, 545, 1334
HpyF3I	CTNAG	6 cut(s)	39, 162, 266, 339, 549, 582
HpySE526I	ACGT	3 cut(s)	153, 725, 1017
Hsp92I	GRCGYC	3 cut(s)	27, 153, 296
Hsp92II	CATG	5 cut(s)	220, 1384, 1450, 1550, 1584
HspAI	GCGC	1 cut(s)	1228
Kzo9I	GATC	3 cut(s)	59, 280, 600
LmnI	GCTCC	2 cut(s)	48, 380
Lsp1109I	GCAGC	2 cut(s)	55, 1400
LweI	GCATC	5 cut(s)	234, 362, 750, 1248, 1277
MaeI	CTAG	2 cut(s)	489, 1338
MaeII	ACGT	3 cut(s)	153, 725, 1017
MaeIII	GTNAC	5 cut(s)	53, 134, 721, 856, 1078
MalI	GATC	3 cut(s)	61, 282, 602
MbiI	CCGCTC	1 cut(s)	208
MboI	GATC	3 cut(s)	59, 280, 600
MboII	GAAGA	6 cut(s)	186, 189, 192, 355, 374, 486
MfeI	CAATTG	1 cut(s)	446
MflI	RGATCY	2 cut(s)	59, 280
MhlI	GDGCHC	2 cut(s)	45, 914
MluCI	AATT	8 cut(s)	314, 446, 820, 973, 1183, 1269, 1331, 1438
MmeI	TCCRAC	2 cut(s)	48, 279
MroXI	GAANNNNTTC	2 cut(s)	318, 1098
MseI	TTAA	8 cut(s)	143, 797, 824, 1164, 1403, 1442, 1493, 1535
MslI	CAYNNNNRTG	3 cut(s)	215, 500, 1551
MspA1I	CMGCKG	2 cut(s)	68, 430
MspI	CCGG	2 cut(s)	289, 790
MspR9I	CCNGG	3 cut(s)	274, 289, 791
MunI	CAATTG	1 cut(s)	446
MvaI	CCWGG	1 cut(s)	274
MvnI	CGCG	1 cut(s)	150
MwoI	GCNNNNNNNGC	5 cut(s)	77, 256, 293, 545, 1334
NciI	CCSGG	2 cut(s)	289, 791
NdeI	CATATG	2 cut(s)	774, 997
NdeII	GATC	3 cut(s)	59, 280, 600
NlaIII	CATG	5 cut(s)	220, 1384, 1450, 1550, 1584
NlaIV	GGNNCC	4 cut(s)	686, 699, 912, 1358
NmuCI	GTSAC	2 cut(s)	53, 1078
NspI	RCATGY	1 cut(s)	1450
PagI	TCATGA	1 cut(s)	1580
PaqCI	CACCTGC	1 cut(s)	1241
PdmI	GAANNNNTTC	2 cut(s)	318, 1098
PfeI	GAWTC	5 cut(s)	335, 424, 1099, 1156, 1568
PflFI	GACNNNGTC	1 cut(s)	295
PkrI	GCNGC	7 cut(s)	31, 70, 73, 184, 187, 258, 1390
Ppu21I	YACGTR	1 cut(s)	1018
PpuMI	RGGWCCY	2 cut(s)	685, 1356
PshBI	ATTAAT	1 cut(s)	1535
PsiI	TTATAA	2 cut(s)	533, 621
Psp124BI	GAGCTC	1 cut(s)	45
Psp5II	RGGWCCY	2 cut(s)	685, 1356
Psp6I	CCWGG	1 cut(s)	272
PspGI	CCWGG	1 cut(s)	272
PspN4I	GGNNCC	4 cut(s)	686, 699, 912, 1358
PspOMI	GGGCCC	1 cut(s)	910
PspPI	GGNCC	6 cut(s)	270, 286, 685, 910, 911, 1356
PspPPI	RGGWCCY	2 cut(s)	685, 1356
PstI	CTGCAG	1 cut(s)	1252
PsuI	RGATCY	2 cut(s)	59, 280
PsyI	GACNNNGTC	1 cut(s)	295
PvuII	CAGCTG	1 cut(s)	430
RsaI	GTAC	4 cut(s)	728, 1242, 1456, 1481
RsaNI	GTAC	4 cut(s)	727, 1241, 1455, 1480
RseI	CAYNNNNRTG	3 cut(s)	215, 500, 1551
SacI	GAGCTC	1 cut(s)	45
SaqAI	TTAA	8 cut(s)	143, 797, 824, 1164, 1403, 1442, 1493, 1535
SatI	GCNGC	7 cut(s)	30, 69, 72, 183, 186, 257, 1389
Sau3AI	GATC	3 cut(s)	59, 280, 600
Sau96I	GGNCC	6 cut(s)	270, 286, 685, 910, 911, 1356
ScrFI	CCNGG	3 cut(s)	274, 289, 791
SduI	GDGCHC	2 cut(s)	45, 914
SfaNI	GCATC	5 cut(s)	234, 362, 750, 1248, 1277
SfcI	CTRYAG	1 cut(s)	1248
SinI	GGWCC	2 cut(s)	685, 1356
SmiMI	CAYNNNNRTG	3 cut(s)	215, 500, 1551
SmlI	CTYRAG	3 cut(s)	569, 689, 1176
SmoI	CTYRAG	3 cut(s)	569, 689, 1176
Sse9I	AATT	8 cut(s)	314, 446, 820, 973, 1183, 1269, 1331, 1438
SspI	AATATT	1 cut(s)	328
SspMI	CTAG	2 cut(s)	489, 1338
SstI	GAGCTC	1 cut(s)	45
StyD4I	CCNGG	3 cut(s)	272, 287, 789
StyI	CCWWGG	2 cut(s)	522, 1142
TaaI	ACNGT	2 cut(s)	787, 1479
TaiI	ACGT	3 cut(s)	156, 728, 1020
TaqI	TCGA	2 cut(s)	221, 952
TasI	AATT	8 cut(s)	314, 446, 820, 973, 1183, 1269, 1331, 1438
TatI	WGTACW	2 cut(s)	1240, 1479
TauI	GCSGC	5 cut(s)	32, 74, 185, 188, 259
TfiI	GAWTC	5 cut(s)	335, 424, 1099, 1156, 1568
Tru1I	TTAA	8 cut(s)	143, 797, 824, 1164, 1403, 1442, 1493, 1535
Tru9I	TTAA	8 cut(s)	143, 797, 824, 1164, 1403, 1442, 1493, 1535
TscAI	CASTG	1 cut(s)	633
TseFI	GTSAC	2 cut(s)	53, 1078
TseI	GCWGC	2 cut(s)	68, 1388
Tsp45I	GTSAC	2 cut(s)	53, 1078
TspDTI	ATGAA	7 cut(s)	17, 917, 1127, 1146, 1308, 1560, 1569
TspGWI	ACGGA	1 cut(s)	414
TspRI	CASTG	1 cut(s)	633
Tth111I	GACNNNGTC	1 cut(s)	295
VpaK11BI	GGWCC	2 cut(s)	685, 1356
VspI	ATTAAT	1 cut(s)	1535
XagI	CCTNNNNNAGG	1 cut(s)	692
XapI	RAATTY	2 cut(s)	1331, 1438
XceI	RCATGY	1 cut(s)	1450
XcmI	CCANNNNNNNNNTGG	1 cut(s)	280
XmiI	GTMKAC	1 cut(s)	1020
XmnI	GAANNNNTTC	2 cut(s)	318, 1098
XspI	CTAG	2 cut(s)	489, 1338
ZraI	GACGTC	1 cut(s)	154

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.