Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0005481

Physical Location & Seq

Genomic Coordinates Reverse (-)

14810622 .. 14815326

Gene Structure 4705 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012051

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGAAACGAATATGGAGGCTCTCCGACGCGGCCCAATCCGAGCTCTTCAGCCGCCACCGATACTCCCCTAAACCCAAAACCCTAACCCCCTACACTTACACCCTCACCAACTCCGCCAATTTCAGATTCACTCGCGACGTCGTCAACAATGCCCAGAACCCTCCTTCTTCTCCTCCACCCAACTCCTTCTCAAGCGTCATCGCCCTCTTCACCGACCAGCCCAGCCCACAAGAGATCAGGGCCCGGGAGGATCTGGCCCGCAAGGTCAATCAGCTGAGGGAGGAGCTGGTTCAGAGCGCCGGCGATTCCGAGAAGATTGTTAGGGTTTTGGAGGGGAAGGGCTGTGAGTTTTTGTGGAGCTTTAATTTTAAGGATGTAATTCCTATTGTGGAGCTTATGCATCAGTTGCGTCATTGGCCTCATTTGGCCCTGGAGGTTTTTAATTGGAGAAGAAATCAGGCGGATGGTAGCACTCCTATGACTTCTGAGGAGTATACCAAGGCTATTACATTTGCAGGTAAAATTAAGAATGTTCAACTTGCCCTTGAGTTATTCGATGAAGCTGTAAACAAGCGGATCAAGACAACTTCTATGTATAATGCACTGATGAGTGCTTATGTGCTCAATGGCCATACTGCTAAATGTCAGTCTTTGTTTCGGGACCTCAAGAGGGAACAGTATATCAGACCTACCATTGTGACATACAACATTCTCATTTCCGTCTTTGGTCGATTGATGCTAGTTGATCATATGGAGGCAACTCTTCGGAGGTTAAAGGAATCAGATCTCTCCCCTAATTTAGGCACATACAATAATTTAATTGCTGGATACATTACTGCTTGGATGTGGGATAGAATGGAAAAAACTTTCGAAATGATGAAGGCAGGCCCTGTTAGTCCTGATATTAGCACCTACTTGCTAATACTTCGAGGATATGCTCATTCAGGTAATCTGGTAAAGATGGAGGAGACGTATGAGTTGGTGAAACATAATGTAAACGACAAGGAAATCCCATTGATAAGGGCTATGATATGTGCATATTGCAGGAGTTCTATCACAGACAGAGTGCAAAAAATACACACACTGATGAACCTTATTCCAGAAAATCAATACAGGCCTTGGTTGAATGTGATGCTGATTAGGGTTTATGCTCAAGAGGATTGTTTTGAGGCGATGGAGAGGTCAATAAATGAAGCATTTGAGCGCAAAACCTCCGTACATACTGCCGGTTTGATGCGATCTATAGTTGCTAGTTATTTCAGATGCAAAGAGGTGGACAGACTAGCACATTTTGTGAAGCGTGCAGAATGTGCTAGGTGGAGAATTTGCCGGTCCCTATATCACTGTAAGATGGTCATGTATGCATCAGAACAGCGCTTAGAAGAAATGGAGAATGTCCTTGGTGAGATGGCGTGTTTTAAGTTGGACCGCACGAAGAAAACATTTTGGATATTGTATCATGCCTACTCTAGTTGTGGTCAAAGAAATAAGGTTGCACAAGTATTAGGATCAATGTGGAAGCATGGTTATGAAGTTCCATTGGAGTGGTTCAACGTCTTTCTCAGAATCAGTACATTATTTGATGGACCATGGCAGTCAAAATGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

536

Amino Acids

62.42

Weight (kDa)

9.17

Isoelectric Point (pI)

44.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	184 - 243	1.9e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	196 - 242	7.6e-08	PPR repeat family
PPR_2	PF13041	265 - 314	8.2e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30780 AT2G30780
fragaria_vesca	FvH4_2g24360 FvH4_2g24360 FvH4_2g24360 FvH4_2g24360 FvH4_2g24360 FvH4_2g24360 FvH4_2g24360
malus_domestica	MD03G1273200.v1.1 MD11G1295800.v1.1 MD11G1295900.v1.1
prunus_persica	Prupe.8G249700_v2.0.a1 Prupe.8G249700_v2.0.a1
pyrus_communis	pycom03g21770 pycom11g26040
rosa_chinensis	RchiOBHm_Chr6g0292231
rosa_laevigata	RLG00000012051
rosa_multiflora	Rmu_sc0002993.1_g000008 Rmu_sc0015871.1_g000001
rosa_roxburghii	Rroxscaffold_7G00175320
rosa_rugosa	Rorug06G0224500 Rorug06G0224600 Rorug06G0224700
rosa_samantha	Rh6AG337700 Rh6BG345000 Rh6CG352100 Rh6DG338000
rosa_wichuraiana	Rw6G029410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	141
Acc36I	ACCTGC	1 cut(s)	506
AccI	GTMKAC	1 cut(s)	494
AccII	CGCG	2 cut(s)	29, 135
AciI	CCGC	7 cut(s)	29, 52, 114, 259, 461, 574, 1429
AclWI	GGATC	3 cut(s)	258, 584, 1516
AcoI	YGGCCR	1 cut(s)	628
AcsI	RAATTY	1 cut(s)	1323
AcuI	CTGAAG	1 cut(s)	31
AcyI	GRCGYC	1 cut(s)	138
AfaI	GTAC	2 cut(s)	1218, 1573
AfeI	AGCGCT	1 cut(s)	1376
AfiI	CCNNNNNNNGG	2 cut(s)	670, 800
AgsI	TTSAA	3 cut(s)	536, 1126, 1552
AjnI	CCWGG	1 cut(s)	429
AjuI	GAANNNNNNNTTGG	2 cut(s)	110, 142
AluBI	AGCT	6 cut(s)	43, 274, 286, 360, 394, 563
AluI	AGCT	6 cut(s)	43, 274, 286, 360, 394, 563
Alw21I	GWGCWC	2 cut(s)	45, 624
Alw26I	GTCTC	1 cut(s)	962
AlwI	GGATC	3 cut(s)	258, 584, 1516
AlwNI	CAGNNNCTG	1 cut(s)	890
Ama87I	CYCGRG	1 cut(s)	243
Aor51HI	AGCGCT	1 cut(s)	1376
AoxI	GGCC	8 cut(s)	30, 240, 255, 416, 426, 628, 886, 1115
ApaI	GGGCCC	1 cut(s)	244
ApoI	RAATTY	1 cut(s)	1323
AspLEI	GCGC	3 cut(s)	299, 1206, 1377
AsuC2I	CCSGG	2 cut(s)	244, 245
AsuHPI	GGTGA	4 cut(s)	97, 202, 994, 1415
AsuII	TTCGAA	1 cut(s)	870
AvaI	CYCGRG	1 cut(s)	243
AvaII	GGWCC	4 cut(s)	661, 1332, 1426, 1586
BaeGI	GKGCMC	1 cut(s)	244
BalI	TGGCCA	1 cut(s)	630
BanII	GRGCYC	2 cut(s)	45, 244
Bbv12I	GWGCWC	2 cut(s)	45, 624
BbvCI	CCTCAGC	1 cut(s)	275
BccI	CCATC	6 cut(s)	458, 955, 1168, 1345, 1402, 1577
BciT130I	CCWGG	1 cut(s)	431
BciVI	GTATCC	1 cut(s)	821
BclI	TGATCA	1 cut(s)	745
BcnI	CCSGG	2 cut(s)	244, 245
BcoDI	GTCTC	1 cut(s)	962
BfaI	CTAG	5 cut(s)	740, 1251, 1283, 1314, 1470
BfmI	CTRYAG	1 cut(s)	1242
BfoI	RGCGCY	2 cut(s)	300, 1378
BfuAI	ACCTGC	1 cut(s)	506
BfuI	GTATCC	1 cut(s)	821
BglII	AGATCT	1 cut(s)	784
BisI	GCNGC	2 cut(s)	30, 52
BlsI	GCNGC	2 cut(s)	31, 53
Bme1390I	CCNGG	3 cut(s)	244, 245, 431
Bme18I	GGWCC	4 cut(s)	661, 1332, 1426, 1586
BmeT110I	CYCGRG	1 cut(s)	243
BmiI	GGNNCC	3 cut(s)	242, 662, 1334
BmrFI	CCNGG	3 cut(s)	244, 245, 431
BmsI	GCATC	6 cut(s)	409, 726, 1122, 1224, 1253, 1373
BpmI	CTGGAG	1 cut(s)	452
Bpu10I	CCTNAGC	1 cut(s)	275
Bpu14I	TTCGAA	1 cut(s)	870
BpuEI	CTTGAG	4 cut(s)	175, 566, 650, 1137
BpuMI	CCSGG	2 cut(s)	244, 245
BsaHI	GRCGYC	1 cut(s)	138
BsaJI	CCNNGG	6 cut(s)	243, 429, 498, 1118, 1399, 1589
BsaXI	ACNNNNNCTCC	4 cut(s)	47, 77, 956, 986
Bsc4I	CCNNNNNNNGG	2 cut(s)	670, 800
Bse118I	RCCGGY	3 cut(s)	299, 1226, 1329
BseBI	CCWGG	1 cut(s)	431
BseDI	CCNNGG	6 cut(s)	243, 429, 498, 1118, 1399, 1589
BseGI	GGATG	3 cut(s)	379, 469, 849
BseLI	CCNNNNNNNGG	2 cut(s)	670, 800
BseMII	CTCAG	3 cut(s)	266, 477, 1576
BseRI	GAGGAG	4 cut(s)	162, 296, 503, 980
BseSI	GKGCMC	1 cut(s)	244
BseYI	CCCAGC	1 cut(s)	221
BsgI	GTGCAG	1 cut(s)	1323
Bsh1236I	CGCG	2 cut(s)	29, 135
BshFI	GGCC	8 cut(s)	32, 242, 257, 418, 428, 630, 888, 1117
BsiHKAI	GWGCWC	2 cut(s)	45, 624
BsiHKCI	CYCGRG	1 cut(s)	243
BsiSI	CCGG	4 cut(s)	244, 300, 1227, 1330
BslFI	GGGAC	2 cut(s)	674, 1318
BslI	CCNNNNNNNGG	2 cut(s)	670, 800
BsmAI	GTCTC	1 cut(s)	962
BsmBI	CGTCTC	1 cut(s)	962
BsmFI	GGGAC	2 cut(s)	674, 1318
BsnI	GGCC	8 cut(s)	32, 242, 257, 418, 428, 630, 888, 1117
BsoBI	CYCGRG	1 cut(s)	243
Bsp119I	TTCGAA	1 cut(s)	870
Bsp120I	GGGCCC	1 cut(s)	240
Bsp1286I	GDGCHC	3 cut(s)	45, 244, 624
Bsp143I	GATC	7 cut(s)	234, 250, 576, 745, 784, 1238, 1508
Bsp19I	CCATGG	1 cut(s)	1589
Bsp68I	TCGCGA	1 cut(s)	135
BspACI	CCGC	7 cut(s)	29, 52, 114, 259, 461, 574, 1429
BspANI	GGCC	8 cut(s)	32, 242, 257, 418, 428, 630, 888, 1117
BspCNI	CTCAG	3 cut(s)	267, 478, 1575
BspFNI	CGCG	2 cut(s)	29, 135
BspLI	GGNNCC	3 cut(s)	242, 662, 1334
BspMI	ACCTGC	1 cut(s)	506
BspPI	GGATC	3 cut(s)	258, 584, 1516
BspQI	GCTCTTC	1 cut(s)	50
BspT104I	TTCGAA	1 cut(s)	870
BsrFI	RCCGGY	3 cut(s)	299, 1226, 1329
BssAI	RCCGGY	3 cut(s)	299, 1226, 1329
BssECI	CCNNGG	6 cut(s)	243, 429, 498, 1118, 1399, 1589
BssMI	GATC	7 cut(s)	234, 250, 576, 745, 784, 1238, 1508
BssNAI	GTATAC	1 cut(s)	495
BssNI	GRCGYC	1 cut(s)	138
BssT1I	CCWWGG	4 cut(s)	498, 1118, 1399, 1589
Bst1107I	GTATAC	1 cut(s)	495
Bst2UI	CCWGG	1 cut(s)	431
Bst4CI	ACNGT	2 cut(s)	678, 1346
Bst6I	CTCTTC	3 cut(s)	50, 212, 768
BstACI	GRCGYC	1 cut(s)	138
BstAPI	GCANNNNNTGC	2 cut(s)	406, 1310
BstBI	TTCGAA	1 cut(s)	870
BstC8I	GCNNGC	4 cut(s)	259, 301, 886, 1302
BstDEI	CTNAG	4 cut(s)	275, 486, 1378, 1562
BstDSI	CCRYGG	1 cut(s)	1589
BstENI	CCTNNNNNAGG	1 cut(s)	798
BstF5I	GGATG	3 cut(s)	379, 469, 849
BstFNI	CGCG	2 cut(s)	29, 135
BstH2I	RGCGCY	2 cut(s)	300, 1378
BstHHI	GCGC	3 cut(s)	299, 1206, 1377
BstKTI	GATC	7 cut(s)	237, 253, 579, 748, 787, 1241, 1511
BstMAI	GTCTC	1 cut(s)	962
BstMBI	GATC	7 cut(s)	234, 250, 576, 745, 784, 1238, 1508
BstMWI	GCNNNNNNNGC	3 cut(s)	406, 415, 1310
BstNI	CCWGG	1 cut(s)	431
BstSCI	CCNGG	3 cut(s)	242, 243, 429
BstSFI	CTRYAG	1 cut(s)	1242
BstSLI	GKGCMC	1 cut(s)	244
BstUI	CGCG	2 cut(s)	29, 135
BstX2I	RGATCY	2 cut(s)	250, 784
BstXI	CCANNNNNNTGG	1 cut(s)	1545
BstYI	RGATCY	2 cut(s)	250, 784
BstZ17I	GTATAC	1 cut(s)	495
BsuI	GTATCC	1 cut(s)	821
BsuRI	GGCC	8 cut(s)	32, 242, 257, 418, 428, 630, 888, 1117
BtgI	CCRYGG	1 cut(s)	1589
BtgZI	GCGATG	2 cut(s)	184, 1187
BtsCI	GGATG	3 cut(s)	379, 469, 849
BtsIMutI	CAGTG	3 cut(s)	602, 1082, 1342
BtuMI	TCGCGA	1 cut(s)	135
BveI	ACCTGC	1 cut(s)	506
Cac8I	GCNNGC	4 cut(s)	259, 301, 886, 1302
CaiI	CAGNNNCTG	1 cut(s)	890
CfoI	GCGC	3 cut(s)	299, 1206, 1377
Cfr10I	RCCGGY	3 cut(s)	299, 1226, 1329
Cfr9I	CCCGGG	1 cut(s)	243
CseI	GACGC	3 cut(s)	35, 184, 398
Csp6I	GTAC	2 cut(s)	1217, 1572
CviAII	CATG	4 cut(s)	1357, 1460, 1523, 1590
CviQI	GTAC	2 cut(s)	1217, 1572
DdeI	CTNAG	4 cut(s)	275, 486, 1378, 1562
DpnI	GATC	7 cut(s)	236, 252, 578, 747, 786, 1240, 1510
DpnII	GATC	7 cut(s)	234, 250, 576, 745, 784, 1238, 1508
EaeI	YGGCCR	1 cut(s)	628
Eam1104I	CTCTTC	3 cut(s)	50, 212, 768
EarI	CTCTTC	3 cut(s)	50, 212, 768
EciI	GGCGGA	2 cut(s)	103, 476
Ecl136II	GAGCTC	1 cut(s)	43
Eco130I	CCWWGG	4 cut(s)	498, 1118, 1399, 1589
Eco147I	AGGCCT	1 cut(s)	1117
Eco24I	GRGCYC	2 cut(s)	45, 244
Eco47I	GGWCC	4 cut(s)	661, 1332, 1426, 1586
Eco47III	AGCGCT	1 cut(s)	1376
Eco53kI	GAGCTC	1 cut(s)	43
Eco57I	CTGAAG	1 cut(s)	31
Eco88I	CYCGRG	1 cut(s)	243
EcoICRI	GAGCTC	1 cut(s)	43
EcoNI	CCTNNNNNAGG	1 cut(s)	798
EcoO109I	RGGNCCY	3 cut(s)	240, 661, 887
EcoRII	CCWGG	1 cut(s)	429
EcoT14I	CCWWGG	4 cut(s)	498, 1118, 1399, 1589
EcoT22I	ATGCAT	2 cut(s)	402, 1366
EcoT38I	GRGCYC	2 cut(s)	45, 244
ErhI	CCWWGG	4 cut(s)	498, 1118, 1399, 1589
Esp3I	CGTCTC	1 cut(s)	962
FaeI	CATG	4 cut(s)	1360, 1463, 1526, 1593
FaqI	GGGAC	2 cut(s)	674, 1318
FatI	CATG	4 cut(s)	1356, 1459, 1522, 1589
FauI	CCCGC	1 cut(s)	266
FauNDI	CATATG	1 cut(s)	750
FbaI	TGATCA	1 cut(s)	745
FblI	GTMKAC	1 cut(s)	494
Fnu4HI	GCNGC	2 cut(s)	30, 52
FokI	GGATG	3 cut(s)	386, 476, 856
FriOI	GRGCYC	2 cut(s)	45, 244
Fsp4HI	GCNGC	2 cut(s)	30, 52
FspBI	CTAG	5 cut(s)	740, 1251, 1283, 1314, 1470
GlaI	GCGC	3 cut(s)	298, 1205, 1376
GluI	GCNGC	2 cut(s)	30, 52
GsaI	CCCAGC	1 cut(s)	225
GsuI	CTGGAG	1 cut(s)	452
HaeII	RGCGCY	2 cut(s)	300, 1378
HaeIII	GGCC	8 cut(s)	32, 242, 257, 418, 428, 630, 888, 1117
HapII	CCGG	4 cut(s)	244, 300, 1227, 1330
HgaI	GACGC	3 cut(s)	35, 184, 398
HhaI	GCGC	3 cut(s)	299, 1206, 1377
Hin1I	GRCGYC	1 cut(s)	138
Hin1II	CATG	4 cut(s)	1360, 1463, 1526, 1593
Hin6I	GCGC	3 cut(s)	297, 1204, 1375
HinP1I	GCGC	3 cut(s)	297, 1204, 1375
HincII	GTYRAC	1 cut(s)	145
HindII	GTYRAC	1 cut(s)	145
HinfI	GANTC	4 cut(s)	126, 305, 779, 1566
HpaII	CCGG	4 cut(s)	244, 300, 1227, 1330
HphI	GGTGA	4 cut(s)	97, 202, 994, 1415
Hpy166II	GTNNAC	5 cut(s)	145, 495, 568, 997, 1276
Hpy188III	TCNNGA	7 cut(s)	134, 580, 659, 667, 899, 1100, 1154
Hpy8I	GTNNAC	5 cut(s)	145, 495, 568, 997, 1276
Hpy99I	CGWCG	3 cut(s)	29, 140, 143
HpyAV	CCTTC	4 cut(s)	174, 196, 331, 874
HpyCH4III	ACNGT	2 cut(s)	678, 1346
HpyCH4IV	ACGT	3 cut(s)	138, 971, 1554
HpyF10VI	GCNNNNNNNGC	3 cut(s)	406, 415, 1310
HpyF3I	CTNAG	4 cut(s)	275, 486, 1378, 1562
HpySE526I	ACGT	3 cut(s)	138, 971, 1554
Hsp92I	GRCGYC	1 cut(s)	138
Hsp92II	CATG	4 cut(s)	1360, 1463, 1526, 1593
HspAI	GCGC	3 cut(s)	297, 1204, 1375
KroI	GCCGGC	1 cut(s)	299
KroNI	GCCGGC	1 cut(s)	301
Ksp22I	TGATCA	1 cut(s)	745
Kzo9I	GATC	7 cut(s)	234, 250, 576, 745, 784, 1238, 1508
LguI	GCTCTTC	1 cut(s)	50
LmnI	GCTCC	3 cut(s)	283, 357, 391
LweI	GCATC	6 cut(s)	409, 726, 1122, 1224, 1253, 1373
MaeI	CTAG	5 cut(s)	740, 1251, 1283, 1314, 1470
MaeII	ACGT	3 cut(s)	138, 971, 1554
MaeIII	GTNAC	1 cut(s)	697
MalI	GATC	7 cut(s)	236, 252, 578, 747, 786, 1240, 1510
MboI	GATC	7 cut(s)	234, 250, 576, 745, 784, 1238, 1508
MboII	GAAGA	8 cut(s)	37, 159, 199, 325, 462, 755, 1394, 1447
MflI	RGATCY	2 cut(s)	250, 784
MhlI	GDGCHC	3 cut(s)	45, 244, 624
MlsI	TGGCCA	1 cut(s)	630
MluCI	AATT	9 cut(s)	118, 364, 378, 442, 522, 796, 814, 819, 1323
MluNI	TGGCCA	1 cut(s)	630
MmeI	TCCRAC	2 cut(s)	48, 1404
Mox20I	TGGCCA	1 cut(s)	630
Mph1103I	ATGCAT	2 cut(s)	402, 1366
MreI	CGCCGGCG	1 cut(s)	299
MroNI	GCCGGC	1 cut(s)	299
MscI	TGGCCA	1 cut(s)	630
MseI	TTAA	7 cut(s)	363, 369, 441, 525, 773, 818, 1419
MslI	CAYNNNNRTG	4 cut(s)	476, 1085, 1527, 1543
Msp20I	TGGCCA	1 cut(s)	630
MspA1I	CMGCKG	1 cut(s)	274
MspI	CCGG	4 cut(s)	244, 300, 1227, 1330
MspR9I	CCNGG	3 cut(s)	244, 245, 431
MvaI	CCWGG	1 cut(s)	431
MvnI	CGCG	2 cut(s)	29, 135
MwoI	GCNNNNNNNGC	3 cut(s)	406, 415, 1310
NaeI	GCCGGC	1 cut(s)	301
NciI	CCSGG	2 cut(s)	244, 245
NcoI	CCATGG	1 cut(s)	1589
NdeI	CATATG	1 cut(s)	750
NdeII	GATC	7 cut(s)	234, 250, 576, 745, 784, 1238, 1508
NgoMIV	GCCGGC	1 cut(s)	299
NlaIII	CATG	4 cut(s)	1360, 1463, 1526, 1593
NlaIV	GGNNCC	3 cut(s)	242, 662, 1334
NmuCI	GTSAC	1 cut(s)	697
NruI	TCGCGA	1 cut(s)	135
NsiI	ATGCAT	2 cut(s)	402, 1366
NspV	TTCGAA	1 cut(s)	870
PceI	AGGCCT	1 cut(s)	1117
PciSI	GCTCTTC	1 cut(s)	50
PdiI	GCCGGC	1 cut(s)	301
PfeI	GAWTC	4 cut(s)	126, 305, 779, 1566
PflFI	GACNNNGTC	1 cut(s)	140
PkrI	GCNGC	2 cut(s)	31, 53
PpuMI	RGGWCCY	1 cut(s)	661
Psp124BI	GAGCTC	1 cut(s)	45
Psp5II	RGGWCCY	1 cut(s)	661
Psp6I	CCWGG	1 cut(s)	429
PspFI	CCCAGC	1 cut(s)	221
PspGI	CCWGG	1 cut(s)	429
PspN4I	GGNNCC	3 cut(s)	242, 662, 1334
PspOMI	GGGCCC	1 cut(s)	240
PspPPI	RGGWCCY	1 cut(s)	661
PstNI	CAGNNNCTG	1 cut(s)	890
PsuI	RGATCY	2 cut(s)	250, 784
PsyI	GACNNNGTC	1 cut(s)	140
PvuII	CAGCTG	1 cut(s)	274
RruI	TCGCGA	1 cut(s)	135
RsaI	GTAC	2 cut(s)	1218, 1573
RsaNI	GTAC	2 cut(s)	1217, 1572
RseI	CAYNNNNRTG	4 cut(s)	476, 1085, 1527, 1543
SacI	GAGCTC	1 cut(s)	45
SapI	GCTCTTC	1 cut(s)	50
SaqAI	TTAA	7 cut(s)	363, 369, 441, 525, 773, 818, 1419
SatI	GCNGC	2 cut(s)	30, 52
Sau3AI	GATC	7 cut(s)	234, 250, 576, 745, 784, 1238, 1508
ScrFI	CCNGG	3 cut(s)	244, 245, 431
SduI	GDGCHC	3 cut(s)	45, 244, 624
SfaNI	GCATC	6 cut(s)	409, 726, 1122, 1224, 1253, 1373
SfcI	CTRYAG	1 cut(s)	1242
SfuI	TTCGAA	1 cut(s)	870
SgrAI	CRCCGGYG	1 cut(s)	299
SinI	GGWCC	4 cut(s)	661, 1332, 1426, 1586
SmaI	CCCGGG	1 cut(s)	245
SmiMI	CAYNNNNRTG	4 cut(s)	476, 1085, 1527, 1543
SmlI	CTYRAG	4 cut(s)	190, 545, 665, 1152
SmoI	CTYRAG	4 cut(s)	190, 545, 665, 1152
Sse9I	AATT	9 cut(s)	118, 364, 378, 442, 522, 796, 814, 819, 1323
SseBI	AGGCCT	1 cut(s)	1117
SsiI	CCGC	7 cut(s)	29, 52, 114, 259, 461, 574, 1429
SspMI	CTAG	5 cut(s)	740, 1251, 1283, 1314, 1470
SstI	GAGCTC	1 cut(s)	45
StuI	AGGCCT	1 cut(s)	1117
StyD4I	CCNGG	3 cut(s)	242, 243, 429
StyI	CCWWGG	4 cut(s)	498, 1118, 1399, 1589
TaaI	ACNGT	2 cut(s)	678, 1346
TaiI	ACGT	3 cut(s)	141, 974, 1557
TaqI	TCGA	4 cut(s)	555, 730, 870, 928
TasI	AATT	9 cut(s)	118, 364, 378, 442, 522, 796, 814, 819, 1323
TatI	WGTACW	1 cut(s)	1571
TauI	GCSGC	2 cut(s)	32, 54
TfiI	GAWTC	4 cut(s)	126, 305, 779, 1566
Tru1I	TTAA	7 cut(s)	363, 369, 441, 525, 773, 818, 1419
Tru9I	TTAA	7 cut(s)	363, 369, 441, 525, 773, 818, 1419
TscAI	CASTG	3 cut(s)	609, 1089, 1349
TseFI	GTSAC	1 cut(s)	697
Tsp45I	GTSAC	1 cut(s)	697
TspDTI	ATGAA	6 cut(s)	17, 573, 893, 1103, 1206, 1545
TspGWI	ACGGA	2 cut(s)	709, 1204
TspMI	CCCGGG	1 cut(s)	243
TspRI	CASTG	3 cut(s)	609, 1089, 1349
Tth111I	GACNNNGTC	1 cut(s)	140
VpaK11BI	GGWCC	4 cut(s)	661, 1332, 1426, 1586
XagI	CCTNNNNNAGG	1 cut(s)	798
XapI	RAATTY	1 cut(s)	1323
XmaI	CCCGGG	1 cut(s)	243
XmiI	GTMKAC	1 cut(s)	494
XspI	CTAG	5 cut(s)	740, 1251, 1283, 1314, 1470
ZraI	GACGTC	1 cut(s)	139
Zsp2I	ATGCAT	2 cut(s)	402, 1366

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.