No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATMG00300 |
| fragaria_vesca | FvH4_1g10045 FvH4_1g25743 FvH4_2g16991 FvH4_2g31701 FvH4_4g08662 FvH4_6g44103 FvH4_6g48812 |
| malus_domestica | MD04G1222900.v1.1 MD05G1232300.v1.1 MD05G1288100.v1.1 MD12G1229000.v1.1 |
| prunus_persica | Prupe.1G257900_v2.0.a1 |
| pyrus_communis | pycom13g14690 |
| rosa_chinensis | RchiOBHm_Chr2g0123731 RchiOBHm_Chr2g0123741 RchiOBHm_Chr2g0157311 RchiOBHm_Chr7g0200891 |
| rosa_roxburghii | Rroxscaffold_7G00215990 |
| rosa_wichuraiana | Rw1G024090 Rw2G038200 Rw6G012570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 79 |
| AluBI | AGCT | 3 cut(s) | 6, 58, 135 |
| AluI | AGCT | 3 cut(s) | 6, 58, 135 |
| Alw21I | GWGCWC | 1 cut(s) | 60 |
| ApeKI | GCWGC | 2 cut(s) | 135, 140 |
| AspLEI | GCGC | 1 cut(s) | 140 |
| AspS9I | GGNCC | 1 cut(s) | 175 |
| AsuHPI | GGTGA | 1 cut(s) | 65 |
| AvaII | GGWCC | 1 cut(s) | 175 |
| BanII | GRGCYC | 1 cut(s) | 60 |
| BbsI | GAAGAC | 1 cut(s) | 79 |
| Bbv12I | GWGCWC | 1 cut(s) | 60 |
| BbvI | GCAGC | 2 cut(s) | 122, 127 |
| BfaI | CTAG | 1 cut(s) | 226 |
| BisI | GCNGC | 2 cut(s) | 136, 141 |
| BlsI | GCNGC | 2 cut(s) | 137, 142 |
| Bme18I | GGWCC | 1 cut(s) | 175 |
| BmgT120I | GGNCC | 1 cut(s) | 175 |
| BpiI | GAAGAC | 1 cut(s) | 79 |
| BpmI | CTGGAG | 1 cut(s) | 66 |
| Bse1I | ACTGG | 1 cut(s) | 83 |
| BseNI | ACTGG | 1 cut(s) | 83 |
| BseXI | GCAGC | 2 cut(s) | 122, 127 |
| BsiHKAI | GWGCWC | 1 cut(s) | 60 |
| Bsp1286I | GDGCHC | 1 cut(s) | 60 |
| BsrI | ACTGG | 1 cut(s) | 83 |
| BstC8I | GCNNGC | 1 cut(s) | 8 |
| BstHHI | GCGC | 1 cut(s) | 140 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 64 |
| BstV1I | GCAGC | 2 cut(s) | 122, 127 |
| BstV2I | GAAGAC | 1 cut(s) | 79 |
| Cac8I | GCNNGC | 1 cut(s) | 8 |
| CfoI | GCGC | 1 cut(s) | 140 |
| Cfr13I | GGNCC | 1 cut(s) | 175 |
| CseI | GACGC | 1 cut(s) | 161 |
| Csp6I | GTAC | 1 cut(s) | 78 |
| CviJI | RGCY | 3 cut(s) | 6, 58, 135 |
| CviKI_1 | RGCY | 3 cut(s) | 6, 58, 135 |
| CviQI | GTAC | 1 cut(s) | 78 |
| Ecl136II | GAGCTC | 1 cut(s) | 58 |
| Eco24I | GRGCYC | 1 cut(s) | 60 |
| Eco47I | GGWCC | 1 cut(s) | 175 |
| Eco53kI | GAGCTC | 1 cut(s) | 58 |
| EcoICRI | GAGCTC | 1 cut(s) | 58 |
| EcoT38I | GRGCYC | 1 cut(s) | 60 |
| FaiI | YATR | 1 cut(s) | 203 |
| Fnu4HI | GCNGC | 2 cut(s) | 136, 141 |
| FriOI | GRGCYC | 1 cut(s) | 60 |
| Fsp4HI | GCNGC | 2 cut(s) | 136, 141 |
| FspBI | CTAG | 1 cut(s) | 226 |
| GlaI | GCGC | 1 cut(s) | 139 |
| GluI | GCNGC | 2 cut(s) | 136, 141 |
| GsuI | CTGGAG | 1 cut(s) | 66 |
| HgaI | GACGC | 1 cut(s) | 161 |
| HhaI | GCGC | 1 cut(s) | 140 |
| Hin6I | GCGC | 1 cut(s) | 138 |
| HinP1I | GCGC | 1 cut(s) | 138 |
| HinfI | GANTC | 3 cut(s) | 125, 147, 197 |
| HphI | GGTGA | 1 cut(s) | 65 |
| Hpy166II | GTNNAC | 1 cut(s) | 22 |
| Hpy188I | TCNGA | 3 cut(s) | 71, 124, 130 |
| Hpy8I | GTNNAC | 1 cut(s) | 22 |
| Hpy99I | CGWCG | 1 cut(s) | 155 |
| HpyCH4IV | ACGT | 1 cut(s) | 76 |
| HpyCH4V | TGCA | 1 cut(s) | 98 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 64 |
| HpySE526I | ACGT | 1 cut(s) | 76 |
| HspAI | GCGC | 1 cut(s) | 138 |
| LmnI | GCTCC | 2 cut(s) | 63, 72 |
| LpnPI | CCDG | 2 cut(s) | 96, 129 |
| Lsp1109I | GCAGC | 2 cut(s) | 122, 127 |
| MaeI | CTAG | 1 cut(s) | 226 |
| MaeII | ACGT | 1 cut(s) | 76 |
| MaeIII | GTNAC | 2 cut(s) | 85, 107 |
| MboII | GAAGA | 1 cut(s) | 84 |
| MhlI | GDGCHC | 1 cut(s) | 60 |
| MnlI | CCTC | 1 cut(s) | 166 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 64 |
| NmuCI | GTSAC | 1 cut(s) | 107 |
| PfeI | GAWTC | 3 cut(s) | 125, 147, 197 |
| PkrI | GCNGC | 2 cut(s) | 137, 142 |
| Psp124BI | GAGCTC | 1 cut(s) | 60 |
| PspPI | GGNCC | 1 cut(s) | 175 |
| RsaI | GTAC | 1 cut(s) | 79 |
| RsaNI | GTAC | 1 cut(s) | 78 |
| SacI | GAGCTC | 1 cut(s) | 60 |
| SatI | GCNGC | 2 cut(s) | 136, 141 |
| Sau96I | GGNCC | 1 cut(s) | 175 |
| SduI | GDGCHC | 1 cut(s) | 60 |
| SetI | ASST | 4 cut(s) | 8, 60, 79, 137 |
| SgeI | CNNG | 8 cut(s) | 19, 29, 95, 127, 156, 184, 197, 202 |
| SinI | GGWCC | 1 cut(s) | 175 |
| SspMI | CTAG | 1 cut(s) | 226 |
| SstI | GAGCTC | 1 cut(s) | 60 |
| TaiI | ACGT | 1 cut(s) | 79 |
| TaqI | TCGA | 2 cut(s) | 150, 171 |
| TfiI | GAWTC | 3 cut(s) | 125, 147, 197 |
| TseFI | GTSAC | 1 cut(s) | 107 |
| TseI | GCWGC | 2 cut(s) | 135, 140 |
| Tsp45I | GTSAC | 1 cut(s) | 107 |
| VpaK11BI | GGWCC | 1 cut(s) | 175 |
| XspI | CTAG | 1 cut(s) | 226 |