Prupe.1G257900_v2.0.a1

disease resistance protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
26780224 .. 26780541
318 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G257900.1

Sequence Viewer

Length: 318 bp
ATGGAGTTTGATATATATGAAGGAAGAAAGGGTAGCAAGATTTCGTTGGGAGACAAAACAAATTGTGATGTATTGGGCGTGGGAATAATGAAGATCAAGATGCAAGATGGTGTAGTTAGGAGCCTTAGTGAGGTAAGGCATGTACTGGCACTAAGATTGAATCTTATTTCCCTTGGTGATAGAGAAGGGTATTCTTACAAGGCCAAAGGAGGAAAGCTCTTAATCACACAAGGTTCGGTGGTGATGATGAGGGGGAGATTCAATCTAACAAAGTTTATTAGCTTTTTTTTGGTGGGAGGGAGTACAATGGCAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

106

Amino Acids

11.51

Weight (kDa)

9.86

Isoelectric Point (pI)

14.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 302
AfaI GTAC 2 cut(s) 144, 304
AfiI CCNNNNNNNGG 1 cut(s) 130
AgsI TTSAA 2 cut(s) 160, 262
AluBI AGCT 2 cut(s) 217, 282
AluI AGCT 2 cut(s) 217, 282
Alw26I GTCTC 1 cut(s) 45
AoxI GGCC 1 cut(s) 201
AsuHPI GGTGA 2 cut(s) 188, 253
BccI CCATC 1 cut(s) 101
BcoDI GTCTC 1 cut(s) 45
BfuAI ACCTGC 1 cut(s) 302
BmiI GGNNCC 1 cut(s) 122
BmsI GCATC 1 cut(s) 90
BplI GAGNNNNNCTC 2 cut(s) 201, 233
BsaJI CCNNGG 1 cut(s) 172
BsaXI ACNNNNNCTCC 2 cut(s) 112, 142
Bsc4I CCNNNNNNNGG 1 cut(s) 130
Bse1I ACTGG 1 cut(s) 150
BseDI CCNNGG 1 cut(s) 172
BseLI CCNNNNNNNGG 1 cut(s) 130
BseNI ACTGG 1 cut(s) 150
BshFI GGCC 1 cut(s) 203
BslI CCNNNNNNNGG 1 cut(s) 130
BsmAI GTCTC 1 cut(s) 45
BsnI GGCC 1 cut(s) 203
Bsp143I GATC 1 cut(s) 93
BspANI GGCC 1 cut(s) 203
BspLI GGNNCC 1 cut(s) 122
BspMI ACCTGC 1 cut(s) 302
BsrI ACTGG 1 cut(s) 150
BssECI CCNNGG 1 cut(s) 172
BssMI GATC 1 cut(s) 93
BssT1I CCWWGG 1 cut(s) 172
BstDEI CTNAG 2 cut(s) 125, 152
BstENI CCTNNNNNAGG 1 cut(s) 128
BstKTI GATC 1 cut(s) 96
BstMAI GTCTC 1 cut(s) 45
BstMBI GATC 1 cut(s) 93
BstNSI RCATGY 1 cut(s) 143
BsuRI GGCC 1 cut(s) 203
BveI ACCTGC 1 cut(s) 302
Csp6I GTAC 2 cut(s) 143, 303
CviAII CATG 1 cut(s) 140
CviJI RGCY 4 cut(s) 123, 203, 217, 282
CviKI_1 RGCY 4 cut(s) 123, 203, 217, 282
CviQI GTAC 2 cut(s) 143, 303
DdeI CTNAG 2 cut(s) 125, 152
DpnI GATC 1 cut(s) 95
DpnII GATC 1 cut(s) 93
Eco130I CCWWGG 1 cut(s) 172
EcoNI CCTNNNNNAGG 1 cut(s) 128
EcoT14I CCWWGG 1 cut(s) 172
ErhI CCWWGG 1 cut(s) 172
FaeI CATG 1 cut(s) 143
FaiI YATR 4 cut(s) 14, 16, 18, 141
FatI CATG 1 cut(s) 139
HaeIII GGCC 1 cut(s) 203
Hin1II CATG 1 cut(s) 143
HinfI GANTC 2 cut(s) 160, 258
HphI GGTGA 2 cut(s) 188, 253
Hpy188III TCNNGA 1 cut(s) 97
HpyAV CCTTC 2 cut(s) 14, 179
HpyCH4V TGCA 1 cut(s) 103
HpyF3I CTNAG 2 cut(s) 125, 152
Hsp92II CATG 1 cut(s) 143
Kzo9I GATC 1 cut(s) 93
LmnI GCTCC 1 cut(s) 120
LpnPI CCDG 2 cut(s) 131, 297
LweI GCATC 1 cut(s) 90
MalI GATC 1 cut(s) 95
MboI GATC 1 cut(s) 93
MboII GAAGA 2 cut(s) 36, 103
MluCI AATT 1 cut(s) 61
MnlI CCTC 4 cut(s) 124, 203, 243, 290
MseI TTAA 1 cut(s) 221
NdeII GATC 1 cut(s) 93
NlaIII CATG 1 cut(s) 143
NlaIV GGNNCC 1 cut(s) 122
NspI RCATGY 1 cut(s) 143
PfeI GAWTC 2 cut(s) 160, 258
PspN4I GGNNCC 1 cut(s) 122
RsaI GTAC 2 cut(s) 144, 304
RsaNI GTAC 2 cut(s) 143, 303
SaqAI TTAA 1 cut(s) 221
Sau3AI GATC 1 cut(s) 93
SetI ASST 5 cut(s) 135, 219, 235, 284, 316
SfaNI GCATC 1 cut(s) 90
SgeI CNNG 9 cut(s) 49, 91, 109, 116, 152, 158, 185, 211, 242
Sse9I AATT 1 cut(s) 61
StyI CCWWGG 1 cut(s) 172
TasI AATT 1 cut(s) 61
TatI WGTACW 2 cut(s) 142, 302
TfiI GAWTC 2 cut(s) 160, 258
Tru1I TTAA 1 cut(s) 221
Tru9I TTAA 1 cut(s) 221
TspDTI ATGAA 2 cut(s) 33, 104
XagI CCTNNNNNAGG 1 cut(s) 128
XceI RCATGY 1 cut(s) 143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.