Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0007311

Physical Location & Seq

Genomic Coordinates Forward (+)

21628666 .. 21632765

Gene Structure 4100 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1088700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2049 bp

ATGGCAGGAGAACTGCTGAGTAGTAAAGCTAACAAGTCAAGGAACAACATGGCTTCTTCCTCGGTTGGTGGGTTCTGCTACTCTGATGATGTCTCATCCAGCAATCCTACAACCACCCACTTCACCACCAATCAGATCCAAGACTTCGGGTCAAACCCTGCTGAGATCTTCAACCTCACCACTGGCATGGAGATGATAGGTTTTCCCAAGCAGCAAAGTGACACTTCTAGCCCTGCAGCTTCATCCATCTGGAATAAAGCTGGCTTCTTTGGCAAACAACAACAGCAACCTGATTTCACAACTGGGATTTCAGAAACCAGCACTAATCATCATCATCAGAACAATCTAATGGTTGGAGGATCTTCACATCATCATCACCACCATCAACAATCCAATGGTTGGCTAGAGAATAATAATAATAACAGGTTTATGGTGGATGATTCTTCTCTGAGGTGTGTGTTTCCATGCGAAGGAAATGAGAGGCCAAGTCAAGGCCTTTCACTCTCTCTCAGCTCAAATAATCCTTCCTCTATTGGGTTGCAGTCCTTTGAGCTCAGACAGACCAACCATCATCAGCCACATCAACAAAACCATCAGGATGATGGTGAGGATGATCACATGAGGTTTATGCAAGATGGGTTCTTGGGAAAAGCTGCTTCTCATGCTTCTGCTTCTGGGGCAAGCAGTCTTCATCATGAAGGGCTTTTCCAGTTGAGGAACTCGAAGTACCTGGGCCCTGCCCAGCAGCTTCTCAATGAGTTCTGCAGCCTTGGAACAAAGCTAACAACTGCTGATACACAAAAGCAAAAGCCCCACAAAAACAAACAGTGGGGAGAACAAGAGGACAATGGCAGTACTAGCTCTTCAAGAAACAAACAACAATCCAACATCTACTCCCTTGAATTTGTGGAGTTGCAGAAGCGAAAAAACAGACTGCTATCAATGCTTGAAGAAGTGGAGAGGAGGTATAAGAACTACTGCGATCAAATGAAGGCGGTGGTGTCATCGTTCGAAGCAGTGGCAGGAGCCGGGGCTGCCACTGTGTACTCCGCCTTGGCGGCAAAGGCCATGTCAAGACATTTCAGGAGCTTGAAAGATGGGATTGTGAGTCAGATTCAGGTCACAAGAAAGGCCATGGGAGAGAAGGACCCGGTGTCTCCCGGAGCAACGAGAGGGGAGACTCCGAGGCTTCGGATTCTCGATCAAACACTTCGACAGCAGAGAGCGTTTCAGCAGATGAACATGATGGAAAGCCATCCCTGGAGACCCCAACGTGGCCTCCCTGAGAGATCAGTATCCGTTCTCCGAGCTTGGCTCTTTGAACACTTTCTTCATCCGTACCCGAGCGATGTCGATAAGCATATCTTAGCCCGCCAAACGGGTCTCTCAAGAAGCCAGGTCTCCAATTGGTTCATTAACGCTAGAGTTAGGCTTTGGAAGCCAATGGTTGAAGAAATGTACATGGAAGAAACAAAGGAGCGTGAAAACAACAACAGCATTACCTCCTCAGATGGTATCGCGACCGACCCCAGCCCGCATCAGTCCCGGCCCGAAGATGAAAAACCGACACATGATCAACTTGTTCGAATAGACTCCGAGTGCCTCTCCTCCATCATCACCAACCCGGAGAAGAATCAATACTCTAGAAGCAGCAAAAGTACCATCTTAAGTCACCACATGCACCCGCAACAAAGTTTTGGGAGGGTAAATGAGTCATTCGGGACCATGGAGTTGGACTTTTCGTCTTATAATCATCACCAGCAACACTCTGGAGGGACGGTTTCTTATGCTAATGATCAGCATCACAACCCAAATCAGGGTTTCAATGGTGGTGGCGGTGTGTCGTTGACATTAGGGTTGCAGCAGCACGATGGAAATGGGGTGAGCTTAGCATTCTCTCCTGCCTCACAGAGCTCTCTATTTTACCCTAGAGATCATGCTGAAGAATGTCAACCGGTTCAGTACTCGCTATTAGATGGGGAAGGTCAGAATAATTTGCCTTACAGAAATTTGATGGGGGCACAGTTGCTACATGACTTGGCAGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006355 GO:0008150 GO:0009506 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030054 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055044 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

683

Amino Acids

76.25

Weight (kDa)

6.55

Isoelectric Point (pI)

54.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	238 - 368	7.2e-45	Associated with HOX
Homeobox_KN	PF05920	438 - 477	8.6e-19	Homeobox KN domain
Homeodomain	PF00046	445 - 477	4.5e-06	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41410
fragaria_vesca	FvH4_5g02960 FvH4_5g02960 FvH4_5g02960 FvH4_5g02960
malus_domestica	MD06G1088700.v1.1 MD14G1109800.v1.1
prunus_persica	Prupe.5G104600_v2.0.a1 Prupe.5G104600_v2.0.a1
pyrus_communis	pycom06g08460 pycom14g10390
rosa_chinensis	RchiOBHm_Chr7g0196921
rosa_laevigata	RLG00000003980
rosa_multiflora	Rmu_sc0001083.1_g000011
rosa_roxburghii	Rroxscaffold_3G00258870
rosa_rugosa	Rorug07G0036500 Rorug07G0036600 Rorug07G0036700 Rorug07G0036700 Rorug07G0036800
rosa_samantha	Rh7AG161000 Rh7BG163200 Rh7CG169300 Rh7DG162600
rosa_wichuraiana	Rw7G014090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1749
AccB7I	CCANNNNNTGG	1 cut(s)	399
AccII	CGCG	1 cut(s)	1520
AciI	CCGC	7 cut(s)	995, 1050, 1058, 1372, 1535, 1685, 1836
AclWI	GGATC	2 cut(s)	130, 367
AcsI	RAATTY	2 cut(s)	902, 2008
AcuI	CTGAAG	1 cut(s)	1962
AfaI	GTAC	7 cut(s)	728, 856, 1046, 1340, 1460, 1660, 1964
AfiI	CCNNNNNNNGG	8 cut(s)	399, 470, 491, 534, 1274, 1378, 1816, 1817
AflII	CTTAAG	1 cut(s)	1666
AgeI	ACCGGT	1 cut(s)	1954
AgsI	TTSAA	8 cut(s)	172, 867, 902, 950, 1093, 1322, 1451, 1825
AhdI	GACNNNNNGTC	3 cut(s)	148, 1153, 1741
AjnI	CCWGG	3 cut(s)	729, 1259, 1395
Alw21I	GWGCWC	2 cut(s)	555, 1916
Alw26I	GTCTC	6 cut(s)	97, 1161, 1172, 1258, 1388, 1405
AlwI	GGATC	2 cut(s)	130, 367
Ama87I	CYCGRG	1 cut(s)	1342
AoxI	GGCC	7 cut(s)	482, 493, 733, 1065, 1131, 1276, 1547
ApaI	GGGCCC	1 cut(s)	737
ApeKI	GCWGC	9 cut(s)	211, 236, 653, 745, 765, 1034, 1650, 1861, 1864
ApoI	RAATTY	2 cut(s)	902, 2008
ArsI	GACNNNNNNTTYG	2 cut(s)	1055, 1087
AsiGI	ACCGGT	1 cut(s)	1954
Asp700I	GAANNNNTTC	1 cut(s)	1326
AspS9I	GGNCC	5 cut(s)	733, 734, 1147, 1548, 1722
AsuC2I	CCSGG	5 cut(s)	1030, 1151, 1161, 1546, 1625
AsuHPI	GGTGA	8 cut(s)	115, 169, 368, 617, 1609, 1664, 1748, 1894
AsuII	TTCGAA	2 cut(s)	1011, 1585
AvaI	CYCGRG	1 cut(s)	1342
AvaII	GGWCC	2 cut(s)	1147, 1722
BaeGI	GKGCMC	2 cut(s)	737, 2023
BanII	GRGCYC	3 cut(s)	555, 737, 1916
BarI	GAAGNNNNNNTAC	4 cut(s)	847, 879, 1622, 1654
BbsI	GAAGAC	1 cut(s)	680
Bbv12I	GWGCWC	2 cut(s)	555, 1916
BbvI	GCAGC	9 cut(s)	223, 248, 640, 757, 777, 1021, 1662, 1873, 1876
BciT130I	CCWGG	3 cut(s)	731, 1261, 1397
BciVI	GTATCC	1 cut(s)	1306
BclI	TGATCA	3 cut(s)	613, 1573, 1795
BcnI	CCSGG	5 cut(s)	1030, 1151, 1161, 1546, 1625
BcoDI	GTCTC	6 cut(s)	97, 1161, 1172, 1258, 1388, 1405
BfaI	CTAG	6 cut(s)	228, 404, 858, 1422, 1644, 1929
BfmI	CTRYAG	2 cut(s)	234, 763
BfrI	CTTAAG	1 cut(s)	1666
BfuI	GTATCC	1 cut(s)	1306
BglI	GCCNNNNNGGC	1 cut(s)	1058
BglII	AGATCT	1 cut(s)	165
BlpI	GCTNAGC	1 cut(s)	1888
BmcAI	AGTACT	2 cut(s)	856, 1964
Bme1390I	CCNGG	8 cut(s)	731, 1030, 1151, 1161, 1261, 1397, 1546, 1625
Bme18I	GGWCC	2 cut(s)	1147, 1722
BmeRI	GACNNNNNGTC	3 cut(s)	148, 1153, 1741
BmeT110I	CYCGRG	1 cut(s)	1342
BmgT120I	GGNCC	5 cut(s)	733, 734, 1147, 1548, 1722
BmiI	GGNNCC	4 cut(s)	735, 1027, 1149, 1723
BmrFI	CCNGG	8 cut(s)	731, 1030, 1151, 1161, 1261, 1397, 1546, 1625
BmrI	ACTGGG	1 cut(s)	312
BmsI	GCATC	2 cut(s)	1546, 1810
BmuI	ACTGGG	1 cut(s)	312
BpiI	GAAGAC	1 cut(s)	680
BplI	GAGNNNNNCTC	4 cut(s)	1299, 1331, 1589, 1621
BpmI	CTGGAG	2 cut(s)	1282, 1791
Bpu1102I	GCTNAGC	1 cut(s)	1888
Bpu14I	TTCGAA	2 cut(s)	1011, 1585
BpuEI	CTTGAG	1 cut(s)	1372
BpuMI	CCSGG	5 cut(s)	1030, 1151, 1161, 1546, 1625
BsaBI	GATNNNNATC	2 cut(s)	1294, 1800
BsaI	GGTCTC	3 cut(s)	1258, 1388, 1405
BsaJI	CCNNGG	9 cut(s)	60, 730, 769, 1029, 1053, 1134, 1184, 1259, 1725
BsaWI	WCCGGW	1 cut(s)	1954
BsaXI	ACNNNNNCTCC	8 cut(s)	878, 908, 950, 980, 1263, 1293, 1764, 1794
Bsc4I	CCNNNNNNNGG	8 cut(s)	399, 470, 491, 534, 1274, 1378, 1816, 1817
Bse118I	RCCGGY	1 cut(s)	1954
Bse1I	ACTGG	3 cut(s)	187, 307, 709
Bse8I	GATNNNNATC	2 cut(s)	1294, 1800
BseBI	CCWGG	3 cut(s)	731, 1261, 1397
BseDI	CCNNGG	9 cut(s)	60, 730, 769, 1029, 1053, 1134, 1184, 1259, 1725
BseGI	GGATG	7 cut(s)	95, 242, 442, 604, 616, 1255, 1333
BseJI	GATNNNNATC	2 cut(s)	1294, 1800
BseLI	CCNNNNNNNGG	8 cut(s)	399, 470, 491, 534, 1274, 1378, 1816, 1817
BseMII	CTCAG	7 cut(s)	8, 153, 440, 523, 568, 1275, 1521
BseNI	ACTGG	3 cut(s)	187, 307, 709
BseRI	GAGGAG	3 cut(s)	976, 1495, 1597
BseSI	GKGCMC	2 cut(s)	737, 2023
BseXI	GCAGC	9 cut(s)	223, 248, 640, 757, 777, 1021, 1662, 1873, 1876
BseYI	CCCAGC	2 cut(s)	741, 1529
Bsh1236I	CGCG	1 cut(s)	1520
Bsh1285I	CGRYCG	1 cut(s)	1524
BshFI	GGCC	7 cut(s)	484, 495, 735, 1067, 1133, 1278, 1549
BshTI	ACCGGT	1 cut(s)	1954
BsiEI	CGRYCG	1 cut(s)	1524
BsiHKAI	GWGCWC	2 cut(s)	555, 1916
BsiHKCI	CYCGRG	1 cut(s)	1342
BsiSI	CCGG	6 cut(s)	1029, 1151, 1161, 1546, 1625, 1955
BslFI	GGGAC	3 cut(s)	1528, 1735, 1789
BslI	CCNNNNNNNGG	8 cut(s)	399, 470, 491, 534, 1274, 1378, 1816, 1817
BsmAI	GTCTC	6 cut(s)	97, 1161, 1172, 1258, 1388, 1405
BsmFI	GGGAC	3 cut(s)	1528, 1735, 1789
BsmI	GAATGC	1 cut(s)	1892
BsnI	GGCC	7 cut(s)	484, 495, 735, 1067, 1133, 1278, 1549
Bso31I	GGTCTC	3 cut(s)	1258, 1388, 1405
BsoBI	CYCGRG	1 cut(s)	1342
Bsp119I	TTCGAA	2 cut(s)	1011, 1585
Bsp120I	GGGCCC	1 cut(s)	733
Bsp1286I	GDGCHC	4 cut(s)	555, 737, 1916, 2023
Bsp1407I	TGTACA	1 cut(s)	1458
Bsp1720I	GCTNAGC	1 cut(s)	1888
Bsp19I	CCATGG	2 cut(s)	1134, 1725
Bsp68I	TCGCGA	1 cut(s)	1520
BspACI	CCGC	7 cut(s)	995, 1050, 1058, 1372, 1535, 1685, 1836
BspANI	GGCC	7 cut(s)	484, 495, 735, 1067, 1133, 1278, 1549
BspCNI	CTCAG	7 cut(s)	9, 154, 441, 522, 567, 1276, 1520
BspFNI	CGCG	1 cut(s)	1520
BspHI	TCATGA	1 cut(s)	694
BspLI	GGNNCC	4 cut(s)	735, 1027, 1149, 1723
BspMAI	CTGCAG	2 cut(s)	238, 767
BspPI	GGATC	2 cut(s)	130, 367
BspQI	GCTCTTC	1 cut(s)	868
BspT104I	TTCGAA	2 cut(s)	1011, 1585
BspTI	CTTAAG	1 cut(s)	1666
BspTNI	GGTCTC	3 cut(s)	1258, 1388, 1405
BsrFI	RCCGGY	1 cut(s)	1954
BsrGI	TGTACA	1 cut(s)	1458
BsrI	ACTGG	3 cut(s)	187, 307, 709
BssAI	RCCGGY	1 cut(s)	1954
BssECI	CCNNGG	9 cut(s)	60, 730, 769, 1029, 1053, 1134, 1184, 1259, 1725
BssT1I	CCWWGG	4 cut(s)	769, 1053, 1134, 1725
Bst2UI	CCWGG	3 cut(s)	731, 1261, 1397
Bst4CI	ACNGT	4 cut(s)	828, 1042, 1780, 2025
Bst6I	CTCTTC	1 cut(s)	868
BstAFI	CTTAAG	1 cut(s)	1666
BstAUI	TGTACA	1 cut(s)	1458
BstBI	TTCGAA	2 cut(s)	1011, 1585
BstC8I	GCNNGC	4 cut(s)	262, 682, 1372, 1535
BstDEI	CTNAG	9 cut(s)	17, 162, 449, 509, 554, 1284, 1366, 1507, 1888
BstDSI	CCRYGG	2 cut(s)	1134, 1725
BstF5I	GGATG	7 cut(s)	95, 242, 442, 604, 616, 1255, 1333
BstFNI	CGCG	1 cut(s)	1520
BstMAI	GTCTC	6 cut(s)	97, 1161, 1172, 1258, 1388, 1405
BstMCI	CGRYCG	1 cut(s)	1524
BstMWI	GCNNNNNNNGC	9 cut(s)	270, 662, 677, 858, 943, 1034, 1058, 1064, 1438
BstNI	CCWGG	3 cut(s)	731, 1261, 1397
BstNSI	RCATGY	1 cut(s)	1681
BstSCI	CCNGG	8 cut(s)	729, 1028, 1149, 1159, 1259, 1395, 1544, 1623
BstSFI	CTRYAG	2 cut(s)	234, 763
BstSLI	GKGCMC	2 cut(s)	737, 2023
BstUI	CGCG	1 cut(s)	1520
BstV1I	GCAGC	9 cut(s)	223, 248, 640, 757, 777, 1021, 1662, 1873, 1876
BstV2I	GAAGAC	1 cut(s)	680
BstX2I	RGATCY	3 cut(s)	135, 165, 359
BstXI	CCANNNNNNTGG	2 cut(s)	187, 1732
BstYI	RGATCY	3 cut(s)	135, 165, 359
BsuI	GTATCC	1 cut(s)	1306
BsuRI	GGCC	7 cut(s)	484, 495, 735, 1067, 1133, 1278, 1549
BtgI	CCRYGG	2 cut(s)	1134, 1725
BtgZI	GCGATG	1 cut(s)	1362
BtsCI	GGATG	7 cut(s)	95, 242, 442, 604, 616, 1255, 1333
BtsI	GCAGTG	1 cut(s)	1023
BtsIMutI	CAGTG	4 cut(s)	180, 833, 1023, 1038
BtuMI	TCGCGA	1 cut(s)	1520
Cac8I	GCNNGC	4 cut(s)	262, 682, 1372, 1535
CciI	TCATGA	1 cut(s)	694
Cfr10I	RCCGGY	1 cut(s)	1954
Cfr13I	GGNCC	5 cut(s)	733, 734, 1147, 1548, 1722
Csp6I	GTAC	7 cut(s)	727, 855, 1045, 1339, 1459, 1659, 1963
CspAI	ACCGGT	1 cut(s)	1954
CspCI	CAANNNNNGTGG	2 cut(s)	1813, 1848
CviQI	GTAC	7 cut(s)	727, 855, 1045, 1339, 1459, 1659, 1963
DdeI	CTNAG	9 cut(s)	17, 162, 449, 509, 554, 1284, 1366, 1507, 1888
DriI	GACNNNNNGTC	3 cut(s)	148, 1153, 1741
Eam1104I	CTCTTC	1 cut(s)	868
Eam1105I	GACNNNNNGTC	3 cut(s)	148, 1153, 1741
EarI	CTCTTC	1 cut(s)	868
EciI	GGCGGA	1 cut(s)	1039
Ecl136II	GAGCTC	2 cut(s)	553, 1914
Eco130I	CCWWGG	4 cut(s)	769, 1053, 1134, 1725
Eco147I	AGGCCT	1 cut(s)	495
Eco24I	GRGCYC	3 cut(s)	555, 737, 1916
Eco31I	GGTCTC	3 cut(s)	1258, 1388, 1405
Eco47I	GGWCC	2 cut(s)	1147, 1722
Eco53kI	GAGCTC	2 cut(s)	553, 1914
Eco57I	CTGAAG	1 cut(s)	1962
Eco88I	CYCGRG	1 cut(s)	1342
EcoICRI	GAGCTC	2 cut(s)	553, 1914
EcoO109I	RGGNCCY	2 cut(s)	734, 1147
EcoRII	CCWGG	3 cut(s)	729, 1259, 1395
EcoT14I	CCWWGG	4 cut(s)	769, 1053, 1134, 1725
EcoT38I	GRGCYC	3 cut(s)	555, 737, 1916
ErhI	CCWWGG	4 cut(s)	769, 1053, 1134, 1725
FalI	AAGNNNNNCTT	4 cut(s)	208, 240, 1349, 1381
FaqI	GGGAC	3 cut(s)	1528, 1735, 1789
FauI	CCCGC	3 cut(s)	1379, 1542, 1692
FbaI	TGATCA	3 cut(s)	613, 1573, 1795
FokI	GGATG	7 cut(s)	82, 229, 449, 611, 623, 1242, 1320
FriOI	GRGCYC	3 cut(s)	555, 737, 1916
FspBI	CTAG	6 cut(s)	228, 404, 858, 1422, 1644, 1929
GsaI	CCCAGC	2 cut(s)	745, 1533
GsuI	CTGGAG	2 cut(s)	1282, 1791
HaeIII	GGCC	7 cut(s)	484, 495, 735, 1067, 1133, 1278, 1549
HapII	CCGG	6 cut(s)	1029, 1151, 1161, 1546, 1625, 1955
HincII	GTYRAC	2 cut(s)	1848, 1952
HindII	GTYRAC	2 cut(s)	1848, 1952
HinfI	GANTC	8 cut(s)	440, 1108, 1114, 1180, 1195, 1592, 1633, 1712
HpaII	CCGG	6 cut(s)	1029, 1151, 1161, 1546, 1625, 1955
HphI	GGTGA	8 cut(s)	115, 169, 368, 617, 1609, 1664, 1748, 1894
Hpy166II	GTNNAC	3 cut(s)	1045, 1848, 1952
Hpy8I	GTNNAC	3 cut(s)	1045, 1848, 1952
HpyAV	CCTTC	6 cut(s)	464, 534, 692, 985, 1138, 1976
HpyCH4III	ACNGT	4 cut(s)	828, 1042, 1780, 2025
HpyCH4IV	ACGT	1 cut(s)	1273
HpyCH4V	TGCA	7 cut(s)	236, 541, 631, 765, 916, 1681, 1861
HpyF10VI	GCNNNNNNNGC	9 cut(s)	270, 662, 677, 858, 943, 1034, 1058, 1064, 1438
HpyF3I	CTNAG	9 cut(s)	17, 162, 449, 509, 554, 1284, 1366, 1507, 1888
HpySE526I	ACGT	1 cut(s)	1273
Ksp22I	TGATCA	3 cut(s)	613, 1573, 1795
LguI	GCTCTTC	1 cut(s)	868
LmnI	GCTCC	4 cut(s)	1025, 1086, 1163, 1477
Lsp1109I	GCAGC	9 cut(s)	223, 248, 640, 757, 777, 1021, 1662, 1873, 1876
LweI	GCATC	2 cut(s)	1546, 1810
MaeI	CTAG	6 cut(s)	228, 404, 858, 1422, 1644, 1929
MaeII	ACGT	1 cut(s)	1273
MaeIII	GTNAC	3 cut(s)	218, 1120, 1670
MfeI	CAATTG	1 cut(s)	1405
MflI	RGATCY	3 cut(s)	135, 165, 359
MhlI	GDGCHC	4 cut(s)	555, 737, 1916, 2023
MluCI	AATT	4 cut(s)	902, 1405, 1993, 2008
MlyI	GAGTC	4 cut(s)	1117, 1174, 1586, 1721
MmeI	TCCRAC	3 cut(s)	334, 909, 1713
MroXI	GAANNNNTTC	1 cut(s)	1326
MseI	TTAA	2 cut(s)	1416, 1667
MslI	CAYNNNNRTG	3 cut(s)	185, 191, 597
MspCI	CTTAAG	1 cut(s)	1666
MspI	CCGG	6 cut(s)	1029, 1151, 1161, 1546, 1625, 1955
MspR9I	CCNGG	8 cut(s)	731, 1030, 1151, 1161, 1261, 1397, 1546, 1625
MunI	CAATTG	1 cut(s)	1405
Mva1269I	GAATGC	1 cut(s)	1892
MvaI	CCWGG	3 cut(s)	731, 1261, 1397
MvnI	CGCG	1 cut(s)	1520
MwoI	GCNNNNNNNGC	9 cut(s)	270, 662, 677, 858, 943, 1034, 1058, 1064, 1438
NciI	CCSGG	5 cut(s)	1030, 1151, 1161, 1546, 1625
NcoI	CCATGG	2 cut(s)	1134, 1725
NlaIV	GGNNCC	4 cut(s)	735, 1027, 1149, 1723
NmuCI	GTSAC	3 cut(s)	218, 1120, 1670
NruI	TCGCGA	1 cut(s)	1520
NspI	RCATGY	1 cut(s)	1681
NspV	TTCGAA	2 cut(s)	1011, 1585
PagI	TCATGA	1 cut(s)	694
PceI	AGGCCT	1 cut(s)	495
PciSI	GCTCTTC	1 cut(s)	868
PctI	GAATGC	1 cut(s)	1892
PdmI	GAANNNNTTC	1 cut(s)	1326
PfeI	GAWTC	4 cut(s)	440, 1114, 1195, 1633
PflMI	CCANNNNNTGG	1 cut(s)	399
PfoI	TCCNGGA	1 cut(s)	1159
PinAI	ACCGGT	1 cut(s)	1954
PleI	GAGTC	4 cut(s)	1116, 1174, 1586, 1720
PpsI	GAGTC	4 cut(s)	1116, 1174, 1586, 1720
PpuMI	RGGWCCY	1 cut(s)	1147
PsiI	TTATAA	1 cut(s)	1749
Psp124BI	GAGCTC	2 cut(s)	555, 1916
Psp5II	RGGWCCY	1 cut(s)	1147
Psp6I	CCWGG	3 cut(s)	729, 1259, 1395
PspFI	CCCAGC	2 cut(s)	741, 1529
PspGI	CCWGG	3 cut(s)	729, 1259, 1395
PspN4I	GGNNCC	4 cut(s)	735, 1027, 1149, 1723
PspOMI	GGGCCC	1 cut(s)	733
PspPI	GGNCC	5 cut(s)	733, 734, 1147, 1548, 1722
PspPPI	RGGWCCY	1 cut(s)	1147
PsrI	GAACNNNNNNTAC	2 cut(s)	710, 742
PstI	CTGCAG	2 cut(s)	238, 767
PsuI	RGATCY	3 cut(s)	135, 165, 359
RruI	TCGCGA	1 cut(s)	1520
RsaI	GTAC	7 cut(s)	728, 856, 1046, 1340, 1460, 1660, 1964
RsaNI	GTAC	7 cut(s)	727, 855, 1045, 1339, 1459, 1659, 1963
RseI	CAYNNNNRTG	3 cut(s)	185, 191, 597
SacI	GAGCTC	2 cut(s)	555, 1916
SapI	GCTCTTC	1 cut(s)	868
SaqAI	TTAA	2 cut(s)	1416, 1667
Sau96I	GGNCC	5 cut(s)	733, 734, 1147, 1548, 1722
ScaI	AGTACT	2 cut(s)	856, 1964
SchI	GAGTC	4 cut(s)	1117, 1174, 1586, 1721
ScrFI	CCNGG	8 cut(s)	731, 1030, 1151, 1161, 1261, 1397, 1546, 1625
SduI	GDGCHC	4 cut(s)	555, 737, 1916, 2023
SfaNI	GCATC	2 cut(s)	1546, 1810
SfcI	CTRYAG	2 cut(s)	234, 763
SfuI	TTCGAA	2 cut(s)	1011, 1585
SinI	GGWCC	2 cut(s)	1147, 1722
SmiMI	CAYNNNNRTG	3 cut(s)	185, 191, 597
SmlI	CTYRAG	2 cut(s)	1387, 1666
SmoI	CTYRAG	2 cut(s)	1387, 1666
Sse9I	AATT	4 cut(s)	902, 1405, 1993, 2008
SseBI	AGGCCT	1 cut(s)	495
SsiI	CCGC	7 cut(s)	995, 1050, 1058, 1372, 1535, 1685, 1836
SspMI	CTAG	6 cut(s)	228, 404, 858, 1422, 1644, 1929
SstI	GAGCTC	2 cut(s)	555, 1916
StuI	AGGCCT	1 cut(s)	495
StyD4I	CCNGG	8 cut(s)	729, 1028, 1149, 1159, 1259, 1395, 1544, 1623
StyI	CCWWGG	4 cut(s)	769, 1053, 1134, 1725
TaaI	ACNGT	4 cut(s)	828, 1042, 1780, 2025
TaiI	ACGT	1 cut(s)	1276
TaqI	TCGA	6 cut(s)	722, 1011, 1200, 1213, 1353, 1585
TaqII	GACCGA	1 cut(s)	1538
TasI	AATT	4 cut(s)	902, 1405, 1993, 2008
TatI	WGTACW	4 cut(s)	854, 1044, 1458, 1962
TauI	GCSGC	1 cut(s)	1061
TfiI	GAWTC	4 cut(s)	440, 1114, 1195, 1633
Tru1I	TTAA	2 cut(s)	1416, 1667
Tru9I	TTAA	2 cut(s)	1416, 1667
TscAI	CASTG	4 cut(s)	187, 833, 1023, 1045
TseFI	GTSAC	3 cut(s)	218, 1120, 1670
TseI	GCWGC	9 cut(s)	211, 236, 653, 745, 765, 1034, 1650, 1861, 1864
Tsp45I	GTSAC	3 cut(s)	218, 1120, 1670
TspDTI	ATGAA	8 cut(s)	231, 680, 711, 1004, 1253, 1322, 1402, 1572
TspGWI	ACGGA	2 cut(s)	1288, 1326
TspRI	CASTG	4 cut(s)	187, 833, 1023, 1045
Van91I	CCANNNNNTGG	1 cut(s)	399
Vha464I	CTTAAG	1 cut(s)	1666
VpaK11BI	GGWCC	2 cut(s)	1147, 1722
XapI	RAATTY	2 cut(s)	902, 2008
XbaI	TCTAGA	1 cut(s)	1643
XceI	RCATGY	1 cut(s)	1681
XcmI	CCANNNNNNNNNTGG	2 cut(s)	599, 1766
XmnI	GAANNNNTTC	1 cut(s)	1326
XspI	CTAG	6 cut(s)	228, 404, 858, 1422, 1644, 1929
ZrmI	AGTACT	2 cut(s)	856, 1964

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.