Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0007311

Physical Location & Seq

Genomic Coordinates Reverse (-)

12619300 .. 12624176

Gene Structure 4877 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG163200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1431 bp

ATGGCTAGAGAGCTGTGCAGTGAAGATCATAAGTCCTCATCAGTTGGTTTTTGCTACTCGGATGTTTCATCAGCCAATCCAACCATCCACCATCAGAACCAGTTCACAAATCAGATCCAAGGCTTTGATCAGTCAAACCCAGCAGAGATCTTCAACTTGACCACTGGCATGGAGATGATAGGCTTCTCCAAAGGAGCCTTCTTCTCCAAACATGGAGGAGGAGGAGGAGGAGGACCTTCATCTTCGAAAGGCGCCGATCATTTCTACCATCCTCATCAGCAAGAGTACAACACAACCGGCATGTCGGAAACGAGCAGCGAAAACCAGAATCTAATGGAGTCTGGTGGAGCTTGGCACCAGGAGAACAGCAACAATAGGTTCCTTGTTGATGATTCTTCATTGAGGTGTGTTTTCCCATGTGAAGGTAATGAGAGGCCAAGCCAAGGCCTCTCACTCTCTCTTAGCTCATCCAATCCCTCTAGTATTGGCTTACAGTCCTTTGAACTCAGGCAGACAAATCATCATCAAGATATTGGGGGCATCAATCAGAGTCATATGATTTTGCAAGATGGGTATTTGGGTAAAAGCTCAGGTCTTGGTCACCAATCTCTTCTTCATGAGAATCAAGCTGCAGCTTCTGGACTTTTCCAGCTCAGAAACTCAAAGTACTTAGGCCCTGCTCAGGAGCTCTTAAATGAGTTCTGCAGCCTCGGAACAAAGCAGACTGATGCTCTTGGAGTTTCAAAGCACAAGTCAAACAAAACCAGACAGTGGGAAGATCAGGATAACAATAATGGCAGTACTTCTTCGTCTTCGAAAAAGCAGTCTTCCCTGTACTCCCTCGAATTCGTTGAATTGCAGAAGAGAAAAACCAGACTGCTTCAAATGCTGGAAGAGGTGGAGAGGAGATACAAGCACTACTGTGATCAGATGAAGGCGGTGGTCTCATCCTTCGAAACCGTGGCAGGGACTGGAGCCGCCACGGTGTACTCGAAGCTGGCTTCGAAAGCCATGTCAAGACATTTCCGGAGCTTGAAAGACGGGATTGTAGCTCAGATTCAGGCCACAAGGAAAGCAATGGGGGAGAAAGACCCGGTGGCTCCCGGAGCAAGCCGAGGAGAGACGCCTCGGCTTCGGATTCTCGATCAAACTCTCCGGCAGCAGAGGGCTTTTCAACAGATGAACATGATGGAGAGTCATCCATGGCGGCCCCAACGTGGCCTTCCAGAGAGATCCGTCTCGGTTCTTCGGGCTTGGCTCTTCGAACACTTTCTTCACCCGTACCCAAGCGATGTTGATAAACATATCTTAGCCCGCCAAACGGGTCTCTCAAGAAGCCAGGCACGTCCACATCTCTCTCTCTCTAGAATATTAGTATCTACAAAATTACAAATTAAAATTTTGATCCCACCATTTAGTTTATATTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006355 GO:0008150 GO:0009506 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030054 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055044 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

476

Amino Acids

53.03

Weight (kDa)

8.97

Isoelectric Point (pI)

54.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	218 - 349	5.9e-46	Associated with HOX
Homeobox_KN	PF05920	419 - 447	8.5e-09	Homeobox KN domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41410
fragaria_vesca	FvH4_5g02960 FvH4_5g02960 FvH4_5g02960 FvH4_5g02960
malus_domestica	MD06G1088700.v1.1 MD14G1109800.v1.1
prunus_persica	Prupe.5G104600_v2.0.a1 Prupe.5G104600_v2.0.a1
pyrus_communis	pycom06g08460 pycom14g10390
rosa_chinensis	RchiOBHm_Chr7g0196921
rosa_laevigata	RLG00000003980
rosa_multiflora	Rmu_sc0001083.1_g000011
rosa_roxburghii	Rroxscaffold_3G00258870
rosa_rugosa	Rorug07G0036500 Rorug07G0036600 Rorug07G0036700 Rorug07G0036700 Rorug07G0036800
rosa_samantha	Rh7AG161000 Rh7BG163200 Rh7CG169300 Rh7DG162600
rosa_wichuraiana	Rw7G014090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	251, 354
AccB7I	CCANNNNNTGG	1 cut(s)	771
AccIII	TCCGGA	1 cut(s)	1026
AciI	CCGC	4 cut(s)	938, 978, 1207, 1315
AclWI	GGATC	3 cut(s)	109, 1227, 1399
AcsI	RAATTY	2 cut(s)	845, 1398
AcyI	GRCGYC	2 cut(s)	252, 1124
AfaI	GTAC	6 cut(s)	287, 668, 802, 836, 989, 1283
AfiI	CCNNNNNNNGG	7 cut(s)	422, 443, 682, 771, 966, 1217, 1321
AgsI	TTSAA	7 cut(s)	154, 503, 744, 854, 884, 1036, 1175
AjiI	CACGTC	1 cut(s)	1346
AjnI	CCWGG	2 cut(s)	357, 1338
AjuI	GAANNNNNNNTTGG	6 cut(s)	182, 214, 597, 629, 1206, 1238
AleI	CACNNNNGTG	1 cut(s)	921
Alw21I	GWGCWC	1 cut(s)	690
Alw26I	GTCTC	4 cut(s)	949, 1115, 1243, 1331
AlwI	GGATC	3 cut(s)	109, 1227, 1399
AlwNI	CAGNNNCTG	2 cut(s)	638, 971
Aor13HI	TCCGGA	1 cut(s)	1026
AoxI	GGCC	6 cut(s)	434, 445, 673, 1062, 1208, 1219
ApeKI	GCWGC	5 cut(s)	315, 629, 632, 705, 1159
ApoI	RAATTY	2 cut(s)	845, 1398
ArsI	GACNNNNNNTTYG	6 cut(s)	737, 769, 809, 841, 998, 1030
Asp700I	GAANNNNTTC	2 cut(s)	101, 1269
AspLEI	GCGC	1 cut(s)	254
AspS9I	GGNCC	3 cut(s)	233, 674, 1209
AsuC2I	CCSGG	2 cut(s)	1094, 1104
AsuHPI	GGTGA	2 cut(s)	593, 1268
AsuII	TTCGAA	5 cut(s)	245, 815, 954, 1004, 1263
AvaII	GGWCC	1 cut(s)	233
BanI	GGYRCC	2 cut(s)	251, 354
BanII	GRGCYC	1 cut(s)	690
BbsI	GAAGAC	2 cut(s)	804, 819
Bbv12I	GWGCWC	1 cut(s)	690
BbvI	GCAGC	5 cut(s)	327, 616, 644, 717, 1171
BccI	CCATC	5 cut(s)	92, 99, 276, 563, 1183
BciT130I	CCWGG	2 cut(s)	359, 1340
BclI	TGATCA	2 cut(s)	127, 925
BcnI	CCSGG	2 cut(s)	1094, 1104
BcoDI	GTCTC	4 cut(s)	949, 1115, 1243, 1331
BfaI	CTAG	3 cut(s)	6, 480, 1365
BfmI	CTRYAG	2 cut(s)	630, 703
BfoI	RGCGCY	1 cut(s)	255
BglII	AGATCT	1 cut(s)	147
BisI	GCNGC	7 cut(s)	316, 630, 633, 706, 978, 1160, 1208
BlsI	GCNGC	7 cut(s)	317, 631, 634, 707, 979, 1161, 1209
BmcAI	AGTACT	2 cut(s)	668, 802
Bme1390I	CCNGG	4 cut(s)	359, 1094, 1104, 1340
Bme18I	GGWCC	1 cut(s)	233
BmgBI	CACGTC	1 cut(s)	1346
BmgT120I	GGNCC	3 cut(s)	233, 674, 1209
BmiI	GGNNCC	7 cut(s)	196, 253, 356, 380, 976, 1101, 1211
BmrFI	CCNGG	4 cut(s)	359, 1094, 1104, 1340
BmsI	GCATC	2 cut(s)	549, 718
BpiI	GAAGAC	2 cut(s)	804, 819
BpmI	CTGGAG	1 cut(s)	993
Bpu10I	CCTNAGC	2 cut(s)	589, 681
Bpu14I	TTCGAA	5 cut(s)	245, 815, 954, 1004, 1263
BpuEI	CTTGAG	1 cut(s)	1315
BpuMI	CCSGG	2 cut(s)	1094, 1104
BsaHI	GRCGYC	2 cut(s)	252, 1124
BsaI	GGTCTC	2 cut(s)	949, 1331
BsaJI	CCNNGG	8 cut(s)	118, 442, 709, 960, 981, 1114, 1127, 1202
BsaWI	WCCGGW	1 cut(s)	1026
Bsc4I	CCNNNNNNNGG	7 cut(s)	422, 443, 682, 771, 966, 1217, 1321
Bse118I	RCCGGY	1 cut(s)	296
Bse1I	ACTGG	3 cut(s)	100, 169, 976
Bse3DI	GCAATG	1 cut(s)	1083
BseAI	TCCGGA	1 cut(s)	1026
BseBI	CCWGG	2 cut(s)	359, 1340
BseDI	CCNNGG	8 cut(s)	118, 442, 709, 960, 981, 1114, 1127, 1202
BseGI	GGATG	6 cut(s)	67, 84, 268, 467, 947, 1198
BseLI	CCNNNNNNNGG	7 cut(s)	422, 443, 682, 771, 966, 1217, 1321
BseMI	GCAATG	1 cut(s)	1083
BseMII	CTCAG	5 cut(s)	520, 603, 667, 695, 1067
BseNI	ACTGG	3 cut(s)	100, 169, 976
BseRI	GAGGAG	7 cut(s)	231, 234, 237, 240, 243, 919, 1131
BseXI	GCAGC	5 cut(s)	327, 616, 644, 717, 1171
BseYI	CCCAGC	1 cut(s)	139
BsgI	GTGCAG	1 cut(s)	37
BshFI	GGCC	6 cut(s)	436, 447, 675, 1064, 1210, 1221
BshNI	GGYRCC	2 cut(s)	251, 354
BsiHKAI	GWGCWC	1 cut(s)	690
BsiSI	CCGG	5 cut(s)	297, 1027, 1094, 1104, 1156
BslFI	GGGAC	1 cut(s)	982
BslI	CCNNNNNNNGG	7 cut(s)	422, 443, 682, 771, 966, 1217, 1321
BsmAI	GTCTC	4 cut(s)	949, 1115, 1243, 1331
BsmBI	CGTCTC	2 cut(s)	1115, 1243
BsmFI	GGGAC	1 cut(s)	982
BsnI	GGCC	6 cut(s)	436, 447, 675, 1064, 1210, 1221
Bso31I	GGTCTC	2 cut(s)	949, 1331
Bsp119I	TTCGAA	5 cut(s)	245, 815, 954, 1004, 1263
Bsp1286I	GDGCHC	1 cut(s)	690
Bsp13I	TCCGGA	1 cut(s)	1026
Bsp19I	CCATGG	1 cut(s)	1202
BspACI	CCGC	4 cut(s)	938, 978, 1207, 1315
BspANI	GGCC	6 cut(s)	436, 447, 675, 1064, 1210, 1221
BspCNI	CTCAG	5 cut(s)	519, 602, 666, 694, 1066
BspEI	TCCGGA	1 cut(s)	1026
BspHI	TCATGA	1 cut(s)	616
BspLI	GGNNCC	7 cut(s)	196, 253, 356, 380, 976, 1101, 1211
BspMAI	CTGCAG	2 cut(s)	634, 707
BspPI	GGATC	3 cut(s)	109, 1227, 1399
BspQI	GCTCTTC	1 cut(s)	1265
BspT104I	TTCGAA	5 cut(s)	245, 815, 954, 1004, 1263
BspT107I	GGYRCC	2 cut(s)	251, 354
BspTNI	GGTCTC	2 cut(s)	949, 1331
BsrDI	GCAATG	1 cut(s)	1083
BsrFI	RCCGGY	1 cut(s)	296
BsrI	ACTGG	3 cut(s)	100, 169, 976
BssAI	RCCGGY	1 cut(s)	296
BssECI	CCNNGG	8 cut(s)	118, 442, 709, 960, 981, 1114, 1127, 1202
BssNI	GRCGYC	2 cut(s)	252, 1124
BssT1I	CCWWGG	3 cut(s)	118, 442, 1202
Bst2UI	CCWGG	2 cut(s)	359, 1340
Bst4CI	ACNGT	5 cut(s)	495, 771, 923, 961, 985
Bst6I	CTCTTC	4 cut(s)	615, 857, 888, 1265
BstACI	GRCGYC	2 cut(s)	252, 1124
BstBI	TTCGAA	5 cut(s)	245, 815, 954, 1004, 1263
BstC8I	GCNNGC	3 cut(s)	999, 1111, 1315
BstDEI	CTNAG	8 cut(s)	461, 506, 589, 653, 670, 681, 1053, 1309
BstDSI	CCRYGG	3 cut(s)	960, 981, 1202
BstEII	GGTNACC	1 cut(s)	599
BstF5I	GGATG	6 cut(s)	67, 84, 268, 467, 947, 1198
BstH2I	RGCGCY	1 cut(s)	255
BstHHI	GCGC	1 cut(s)	254
BstMAI	GTCTC	4 cut(s)	949, 1115, 1243, 1331
BstMWI	GCNNNNNNNGC	3 cut(s)	886, 1007, 1106
BstNI	CCWGG	2 cut(s)	359, 1340
BstNSI	RCATGY	1 cut(s)	304
BstPI	GGTNACC	1 cut(s)	599
BstSCI	CCNGG	4 cut(s)	357, 1092, 1102, 1338
BstSFI	CTRYAG	2 cut(s)	630, 703
BstV1I	GCAGC	5 cut(s)	327, 616, 644, 717, 1171
BstV2I	GAAGAC	2 cut(s)	804, 819
BstX2I	RGATCY	3 cut(s)	114, 147, 1232
BstXI	CCANNNNNNTGG	1 cut(s)	169
BstYI	RGATCY	3 cut(s)	114, 147, 1232
BsuRI	GGCC	6 cut(s)	436, 447, 675, 1064, 1210, 1221
BtgI	CCRYGG	3 cut(s)	960, 981, 1202
BtgZI	GCGATG	1 cut(s)	1305
BtrI	CACGTC	1 cut(s)	1346
BtsCI	GGATG	6 cut(s)	67, 84, 268, 467, 947, 1198
BtsI	GCAGTG	1 cut(s)	25
BtsIMutI	CAGTG	3 cut(s)	25, 162, 776
Cac8I	GCNNGC	3 cut(s)	999, 1111, 1315
CaiI	CAGNNNCTG	2 cut(s)	638, 971
CciI	TCATGA	1 cut(s)	616
CfoI	GCGC	1 cut(s)	254
Cfr10I	RCCGGY	1 cut(s)	296
Cfr13I	GGNCC	3 cut(s)	233, 674, 1209
CseI	GACGC	1 cut(s)	1132
Csp6I	GTAC	6 cut(s)	286, 667, 801, 835, 988, 1282
CviAII	CATG	8 cut(s)	169, 212, 301, 417, 617, 1012, 1186, 1203
CviQI	GTAC	6 cut(s)	286, 667, 801, 835, 988, 1282
DdeI	CTNAG	8 cut(s)	461, 506, 589, 653, 670, 681, 1053, 1309
DinI	GGCGCC	1 cut(s)	253
Eam1104I	CTCTTC	4 cut(s)	615, 857, 888, 1265
EarI	CTCTTC	4 cut(s)	615, 857, 888, 1265
Ecl136II	GAGCTC	1 cut(s)	688
Eco130I	CCWWGG	3 cut(s)	118, 442, 1202
Eco147I	AGGCCT	1 cut(s)	447
Eco24I	GRGCYC	1 cut(s)	690
Eco31I	GGTCTC	2 cut(s)	949, 1331
Eco47I	GGWCC	1 cut(s)	233
Eco53kI	GAGCTC	1 cut(s)	688
Eco91I	GGTNACC	1 cut(s)	599
EcoICRI	GAGCTC	1 cut(s)	688
EcoO109I	RGGNCCY	2 cut(s)	233, 674
EcoO65I	GGTNACC	1 cut(s)	599
EcoRI	GAATTC	1 cut(s)	845
EcoRII	CCWGG	2 cut(s)	357, 1338
EcoT14I	CCWWGG	3 cut(s)	118, 442, 1202
EcoT38I	GRGCYC	1 cut(s)	690
EgeI	GGCGCC	1 cut(s)	253
EheI	GGCGCC	1 cut(s)	253
ErhI	CCWWGG	3 cut(s)	118, 442, 1202
Esp3I	CGTCTC	2 cut(s)	1115, 1243
FaeI	CATG	8 cut(s)	172, 215, 304, 420, 620, 1015, 1189, 1206
FaqI	GGGAC	1 cut(s)	982
FatI	CATG	8 cut(s)	168, 211, 300, 416, 616, 1011, 1185, 1202
FauI	CCCGC	1 cut(s)	1322
FauNDI	CATATG	1 cut(s)	555
FbaI	TGATCA	2 cut(s)	127, 925
Fnu4HI	GCNGC	7 cut(s)	316, 630, 633, 706, 978, 1160, 1208
FokI	GGATG	6 cut(s)	71, 74, 255, 454, 934, 1185
FriOI	GRGCYC	1 cut(s)	690
Fsp4HI	GCNGC	7 cut(s)	316, 630, 633, 706, 978, 1160, 1208
FspBI	CTAG	3 cut(s)	6, 480, 1365
GlaI	GCGC	1 cut(s)	253
GluI	GCNGC	7 cut(s)	316, 630, 633, 706, 978, 1160, 1208
GsaI	CCCAGC	1 cut(s)	143
GsuI	CTGGAG	1 cut(s)	993
HaeII	RGCGCY	1 cut(s)	255
HaeIII	GGCC	6 cut(s)	436, 447, 675, 1064, 1210, 1221
HapII	CCGG	5 cut(s)	297, 1027, 1094, 1104, 1156
HgaI	GACGC	1 cut(s)	1132
HhaI	GCGC	1 cut(s)	254
Hin1I	GRCGYC	2 cut(s)	252, 1124
Hin1II	CATG	8 cut(s)	172, 215, 304, 420, 620, 1015, 1189, 1206
Hin6I	GCGC	1 cut(s)	252
HinP1I	GCGC	1 cut(s)	252
HinfI	GANTC	8 cut(s)	328, 338, 392, 550, 622, 1057, 1138, 1195
HpaII	CCGG	5 cut(s)	297, 1027, 1094, 1104, 1156
HphI	GGTGA	2 cut(s)	593, 1268
Hpy166II	GTNNAC	3 cut(s)	105, 988, 1349
Hpy8I	GTNNAC	3 cut(s)	105, 988, 1349
HpyAV	CCTTC	6 cut(s)	208, 246, 416, 928, 961, 1232
HpyCH4III	ACNGT	5 cut(s)	495, 771, 923, 961, 985
HpyCH4IV	ACGT	2 cut(s)	1216, 1345
HpyCH4V	TGCA	5 cut(s)	18, 565, 632, 705, 859
HpyF10VI	GCNNNNNNNGC	3 cut(s)	886, 1007, 1106
HpyF3I	CTNAG	8 cut(s)	461, 506, 589, 653, 670, 681, 1053, 1309
HpySE526I	ACGT	2 cut(s)	1216, 1345
Hsp92I	GRCGYC	2 cut(s)	252, 1124
Hsp92II	CATG	8 cut(s)	172, 215, 304, 420, 620, 1015, 1189, 1206
HspAI	GCGC	1 cut(s)	252
KasI	GGCGCC	1 cut(s)	251
Kpn2I	TCCGGA	1 cut(s)	1026
Ksp22I	TGATCA	2 cut(s)	127, 925
LguI	GCTCTTC	1 cut(s)	1265
LmnI	GCTCC	7 cut(s)	194, 347, 685, 974, 1029, 1105, 1106
Lsp1109I	GCAGC	5 cut(s)	327, 616, 644, 717, 1171
LweI	GCATC	2 cut(s)	549, 718
MaeI	CTAG	3 cut(s)	6, 480, 1365
MaeII	ACGT	2 cut(s)	1216, 1345
MaeIII	GTNAC	1 cut(s)	599
MflI	RGATCY	3 cut(s)	114, 147, 1232
MhlI	GDGCHC	1 cut(s)	690
MluCI	AATT	5 cut(s)	845, 854, 1385, 1392, 1398
Mly113I	GGCGCC	1 cut(s)	252
MlyI	GAGTC	3 cut(s)	347, 559, 1204
MmeI	TCCRAC	2 cut(s)	104, 285
MroI	TCCGGA	1 cut(s)	1026
MroXI	GAANNNNTTC	2 cut(s)	101, 1269
MseI	TTAA	3 cut(s)	692, 1395, 1429
MslI	CAYNNNNRTG	4 cut(s)	167, 173, 403, 921
MspI	CCGG	5 cut(s)	297, 1027, 1094, 1104, 1156
MspR9I	CCNGG	4 cut(s)	359, 1094, 1104, 1340
MvaI	CCWGG	2 cut(s)	359, 1340
MwoI	GCNNNNNNNGC	3 cut(s)	886, 1007, 1106
NarI	GGCGCC	1 cut(s)	252
NciI	CCSGG	2 cut(s)	1094, 1104
NcoI	CCATGG	1 cut(s)	1202
NdeI	CATATG	1 cut(s)	555
NlaIII	CATG	8 cut(s)	172, 215, 304, 420, 620, 1015, 1189, 1206
NlaIV	GGNNCC	7 cut(s)	196, 253, 356, 380, 976, 1101, 1211
NmeAIII	GCCGAG	2 cut(s)	1108, 1139
NmuCI	GTSAC	1 cut(s)	599
NspI	RCATGY	1 cut(s)	304
NspV	TTCGAA	5 cut(s)	245, 815, 954, 1004, 1263
OliI	CACNNNNGTG	1 cut(s)	921
PagI	TCATGA	1 cut(s)	616
PceI	AGGCCT	1 cut(s)	447
PciSI	GCTCTTC	1 cut(s)	1265
PcsI	WCGNNNNNNNCGW	1 cut(s)	989
PdmI	GAANNNNTTC	2 cut(s)	101, 1269
PfeI	GAWTC	5 cut(s)	328, 392, 622, 1057, 1138
PflMI	CCANNNNNTGG	1 cut(s)	771
PfoI	TCCNGGA	1 cut(s)	1102
PkrI	GCNGC	7 cut(s)	317, 631, 634, 707, 979, 1161, 1209
PleI	GAGTC	3 cut(s)	346, 558, 1203
PluTI	GGCGCC	1 cut(s)	255
PpsI	GAGTC	3 cut(s)	346, 558, 1203
PpuMI	RGGWCCY	1 cut(s)	233
Psp124BI	GAGCTC	1 cut(s)	690
Psp5II	RGGWCCY	1 cut(s)	233
Psp6I	CCWGG	2 cut(s)	357, 1338
PspEI	GGTNACC	1 cut(s)	599
PspFI	CCCAGC	1 cut(s)	139
PspGI	CCWGG	2 cut(s)	357, 1338
PspN4I	GGNNCC	7 cut(s)	196, 253, 356, 380, 976, 1101, 1211
PspPI	GGNCC	3 cut(s)	233, 674, 1209
PspPPI	RGGWCCY	1 cut(s)	233
PstI	CTGCAG	2 cut(s)	634, 707
PstNI	CAGNNNCTG	2 cut(s)	638, 971
PsuI	RGATCY	3 cut(s)	114, 147, 1232
RsaI	GTAC	6 cut(s)	287, 668, 802, 836, 989, 1283
RsaNI	GTAC	6 cut(s)	286, 667, 801, 835, 988, 1282
RseI	CAYNNNNRTG	4 cut(s)	167, 173, 403, 921
SacI	GAGCTC	1 cut(s)	690
SapI	GCTCTTC	1 cut(s)	1265
SaqAI	TTAA	3 cut(s)	692, 1395, 1429
SatI	GCNGC	7 cut(s)	316, 630, 633, 706, 978, 1160, 1208
Sau96I	GGNCC	3 cut(s)	233, 674, 1209
ScaI	AGTACT	2 cut(s)	668, 802
SchI	GAGTC	3 cut(s)	347, 559, 1204
ScrFI	CCNGG	4 cut(s)	359, 1094, 1104, 1340
SduI	GDGCHC	1 cut(s)	690
SfaNI	GCATC	2 cut(s)	549, 718
SfcI	CTRYAG	2 cut(s)	630, 703
SfoI	GGCGCC	1 cut(s)	253
SfuI	TTCGAA	5 cut(s)	245, 815, 954, 1004, 1263
SinI	GGWCC	1 cut(s)	233
SmiMI	CAYNNNNRTG	4 cut(s)	167, 173, 403, 921
SmlI	CTYRAG	1 cut(s)	1330
SmoI	CTYRAG	1 cut(s)	1330
Sse9I	AATT	5 cut(s)	845, 854, 1385, 1392, 1398
SseBI	AGGCCT	1 cut(s)	447
SsiI	CCGC	4 cut(s)	938, 978, 1207, 1315
SspDI	GGCGCC	1 cut(s)	251
SspI	AATATT	1 cut(s)	1371
SspMI	CTAG	3 cut(s)	6, 480, 1365
SstI	GAGCTC	1 cut(s)	690
StuI	AGGCCT	1 cut(s)	447
StyD4I	CCNGG	4 cut(s)	357, 1092, 1102, 1338
StyI	CCWWGG	3 cut(s)	118, 442, 1202
TaaI	ACNGT	5 cut(s)	495, 771, 923, 961, 985
TaiI	ACGT	2 cut(s)	1219, 1348
TaqI	TCGA	8 cut(s)	245, 815, 843, 954, 992, 1004, 1143, 1263
TasI	AATT	5 cut(s)	845, 854, 1385, 1392, 1398
TatI	WGTACW	5 cut(s)	285, 666, 800, 834, 987
TauI	GCSGC	2 cut(s)	980, 1210
TfiI	GAWTC	5 cut(s)	328, 392, 622, 1057, 1138
Tru1I	TTAA	3 cut(s)	692, 1395, 1429
Tru9I	TTAA	3 cut(s)	692, 1395, 1429
TscAI	CASTG	3 cut(s)	25, 169, 776
TseFI	GTSAC	1 cut(s)	599
TseI	GCWGC	5 cut(s)	315, 629, 632, 705, 1159
Tsp45I	GTSAC	1 cut(s)	599
TspDTI	ATGAA	6 cut(s)	57, 228, 387, 605, 947, 1196
TspGWI	ACGGA	1 cut(s)	1225
TspRI	CASTG	3 cut(s)	25, 169, 776
Van91I	CCANNNNNTGG	1 cut(s)	771
VpaK11BI	GGWCC	1 cut(s)	233
XapI	RAATTY	2 cut(s)	845, 1398
XbaI	TCTAGA	1 cut(s)	1364
XceI	RCATGY	1 cut(s)	304
XmnI	GAANNNNTTC	2 cut(s)	101, 1269
XspI	CTAG	3 cut(s)	6, 480, 1365
ZrmI	AGTACT	2 cut(s)	668, 802

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.