Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0007311

Physical Location & Seq

Genomic Coordinates Forward (+)

53282855 .. 53286671

Gene Structure 3817 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00258870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGGCTAGAGAGCTGTGCAGTGAAGATCATAAGTCCTCATCAGTTGGTTTTTGCTACTCGGATGTTTCATCAGCCAATCCAACCATCCACCATCAGAACCAGTTCACAAATCAGATCCAAGGCTTTGATCAGTCAAACCCAGCAGAGATCTTCAACTTGACCACTGGCATGGAGATGATAGGCTTCTCCAAAGGAGCCTTCTTCTCCAAACATGGAGGAGGACCTTCATCTTCGAAAGGCGCCGATCATTTCTACCATCCTCATCAGCAAGAGTACAACACAACCGGCATGTCGGAAACGAGCAGCGAAAACCAGAATCTAATGGAGTCTGGTGGGGCTTGGCACCAGGAGAACAGCAACAATAGGTTCCTTGTTGATGATTCTTCATTGAGGTGTGTTTTCCCATGTGAAGGTAATGAGAGGCCAAGCCAAGGCCTCTCACTCTCTCTTAGCTCATCCAATCCCTCTAGTATTGGCTTACAGTCCTTTGAACTCAGGCAGACAAATCATCATCAAGATATTGGGGGCATCAATCAGAGTCATATGATATTGCAAGATGGGTATTTGGGTAAAAGCTCAGGTCTTGGTCACCAATCTCTTCTTCATGAGAATCAAGCTGCAGCTTCTGGACTTTTCCAGCTCAGAAACTCAAAGTACTTAGGCCCTGCTCAGGAGCTCTTAAATGAGTTCTGCAGCCTCGGAACAAAGCAGACTGATGCTCTTGGAGTTTCAAAGCAGAAGTCAAACAAAACCAGACAGTGGGAAGATCAGGATAACAATAATGGCAGTACTTCTTCGTCTTCGAAAAAGCAGTCTTCCCTGTACTCCCTCGATTTCGTTGAATTGCAGAAGAGAAAAACCAGACTGCTTCAAATGCTGGAAGAGGTGGAGAGGAGATACAAGCACTACTGTGATCAGATGAAGGCGGTGGTCTCATCCTTCGAAACCGTGGCAGGGACTGGAGCCGCCACGGTGTACTCGAAGCTGGCTTCGAAAGCCATGTCAAGACATTTCCGGAGCTTGAAAGACGGGATTGTAGCTCAGATTCAGGCCACAAGGAAAGCAATGGGGGAGAAAGACCCGGTGGCTCCCGGAGCAAGCCGAGGCGAGACGCCTCGGCTTCGGATTCTCGACCAAACTCTCCGGCAGCAGAGGGCTTTTCAACAGATGAACATGATGGAGAGTCATCCATGGCGGCCCCAACGTGGCCTTCCTGAGAGATCCGTCTCGGTTCTTCGGGCTTGGCTCTTCGAACACTTTCTTCACCCGTACCCAAGCGATGTTGATAAACATATCTTAGCCCGCCAAACGGGCCTCTCAAGAAGCCAGGTATCAAATTGGTTCATTAATGCAAGGGTGAGGCTTTGGAAACCCATGGTTGAAGAAATGTACATGGAAGAAACAAAGGAGCATGAAAACAACCACAACATGTCCTCCTCAGATGGTGTCACTACTGATCATCATGGCGATCCGAGCACGCAGATGACACGACCCGAAGATCAGAAACCGACCCACGACCAACTCCAACTCGTCCGAATAGACTCGGAGTGCCTCTCGTCCATCATCACAAACAACCCGGGGAGAAAAGTACTGGCCACGACTCCAGAAGCGGCAAAAGCACCCTCCAAATGCACCCACAGCACAATTTCGGGAGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006355 GO:0008150 GO:0009506 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030054 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055044 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

552

Amino Acids

61.62

Weight (kDa)

7.13

Isoelectric Point (pI)

53.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	214 - 345	7.9e-46	Associated with HOX
Homeobox_KN	PF05920	415 - 454	6.6e-19	Homeobox KN domain
Homeodomain	PF00046	422 - 454	3.5e-06	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41410
fragaria_vesca	FvH4_5g02960 FvH4_5g02960 FvH4_5g02960 FvH4_5g02960
malus_domestica	MD06G1088700.v1.1 MD14G1109800.v1.1
prunus_persica	Prupe.5G104600_v2.0.a1 Prupe.5G104600_v2.0.a1
pyrus_communis	pycom06g08460 pycom14g10390
rosa_chinensis	RchiOBHm_Chr7g0196921
rosa_laevigata	RLG00000003980
rosa_multiflora	Rmu_sc0001083.1_g000011
rosa_roxburghii	Rroxscaffold_3G00258870
rosa_rugosa	Rorug07G0036500 Rorug07G0036600 Rorug07G0036700 Rorug07G0036700 Rorug07G0036800
rosa_samantha	Rh7AG161000 Rh7BG163200 Rh7CG169300 Rh7DG162600
rosa_wichuraiana	Rw7G014090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	239, 342
AccB7I	CCANNNNNTGG	1 cut(s)	759
AccIII	TCCGGA	1 cut(s)	1014
AciI	CCGC	5 cut(s)	926, 966, 1195, 1303, 1610
AclWI	GGATC	3 cut(s)	109, 1215, 1463
AcoI	YGGCCR	1 cut(s)	1593
AcyI	GRCGYC	2 cut(s)	240, 1112
AfaI	GTAC	8 cut(s)	275, 656, 790, 824, 977, 1271, 1391, 1590
AfiI	CCNNNNNNNGG	7 cut(s)	410, 431, 670, 759, 954, 1205, 1309
AflIII	ACRYGT	1 cut(s)	1428
AgsI	TTSAA	8 cut(s)	154, 491, 732, 842, 872, 1024, 1163, 1382
AjnI	CCWGG	2 cut(s)	345, 1326
AjuI	GAANNNNNNNTTGG	6 cut(s)	182, 214, 585, 617, 1194, 1226
AleI	CACNNNNGTG	1 cut(s)	909
Alw21I	GWGCWC	2 cut(s)	678, 1478
Alw26I	GTCTC	3 cut(s)	937, 1103, 1231
AlwI	GGATC	3 cut(s)	109, 1215, 1463
AlwNI	CAGNNNCTG	2 cut(s)	626, 959
Ama87I	CYCGRG	1 cut(s)	1576
Aor13HI	TCCGGA	1 cut(s)	1014
AoxI	GGCC	8 cut(s)	422, 433, 661, 1050, 1196, 1207, 1312, 1593
ApeKI	GCWGC	5 cut(s)	303, 617, 620, 693, 1147
ArsI	GACNNNNNNTTYG	6 cut(s)	725, 757, 797, 829, 986, 1018
AseI	ATTAAT	1 cut(s)	1347
Asp700I	GAANNNNTTC	2 cut(s)	101, 1257
AspLEI	GCGC	1 cut(s)	242
AspS9I	GGNCC	4 cut(s)	221, 662, 1197, 1312
AsuC2I	CCSGG	4 cut(s)	1082, 1092, 1577, 1578
AsuHPI	GGTGA	3 cut(s)	581, 1256, 1369
AsuII	TTCGAA	5 cut(s)	233, 803, 942, 992, 1251
AvaI	CYCGRG	1 cut(s)	1576
AvaII	GGWCC	1 cut(s)	221
BalI	TGGCCA	1 cut(s)	1595
BanI	GGYRCC	2 cut(s)	239, 342
BanII	GRGCYC	1 cut(s)	678
BbsI	GAAGAC	2 cut(s)	792, 807
Bbv12I	GWGCWC	2 cut(s)	678, 1478
BbvI	GCAGC	5 cut(s)	315, 604, 632, 705, 1159
BccI	CCATC	7 cut(s)	92, 99, 264, 551, 1171, 1436, 1568
BciT130I	CCWGG	2 cut(s)	347, 1328
BclI	TGATCA	3 cut(s)	127, 913, 1456
BcnI	CCSGG	4 cut(s)	1082, 1092, 1577, 1578
BcoDI	GTCTC	3 cut(s)	937, 1103, 1231
BfaI	CTAG	2 cut(s)	6, 468
BfmI	CTRYAG	2 cut(s)	618, 691
BfoI	RGCGCY	1 cut(s)	243
BglI	GCCNNNNNGGC	1 cut(s)	1311
BglII	AGATCT	1 cut(s)	147
BisI	GCNGC	8 cut(s)	304, 618, 621, 694, 966, 1148, 1196, 1611
BlsI	GCNGC	8 cut(s)	305, 619, 622, 695, 967, 1149, 1197, 1612
BmcAI	AGTACT	3 cut(s)	656, 790, 1590
Bme1390I	CCNGG	6 cut(s)	347, 1082, 1092, 1328, 1577, 1578
Bme18I	GGWCC	1 cut(s)	221
BmeT110I	CYCGRG	1 cut(s)	1576
BmgT120I	GGNCC	4 cut(s)	221, 662, 1197, 1312
BmiI	GGNNCC	7 cut(s)	196, 241, 344, 368, 964, 1089, 1199
BmrFI	CCNGG	6 cut(s)	347, 1082, 1092, 1328, 1577, 1578
BmsI	GCATC	2 cut(s)	537, 706
BpiI	GAAGAC	2 cut(s)	792, 807
BplI	GAGNNNNNCTC	2 cut(s)	1538, 1570
BpmI	CTGGAG	2 cut(s)	981, 1587
Bpu10I	CCTNAGC	2 cut(s)	577, 669
Bpu14I	TTCGAA	5 cut(s)	233, 803, 942, 992, 1251
BpuEI	CTTGAG	1 cut(s)	1303
BpuMI	CCSGG	4 cut(s)	1082, 1092, 1577, 1578
BsaHI	GRCGYC	2 cut(s)	240, 1112
BsaI	GGTCTC	1 cut(s)	937
BsaWI	WCCGGW	1 cut(s)	1014
BsaXI	ACNNNNNCTCC	2 cut(s)	1418, 1448
Bsc4I	CCNNNNNNNGG	7 cut(s)	410, 431, 670, 759, 954, 1205, 1309
Bse118I	RCCGGY	1 cut(s)	284
Bse1I	ACTGG	4 cut(s)	100, 169, 964, 1596
Bse3DI	GCAATG	1 cut(s)	1071
BseAI	TCCGGA	1 cut(s)	1014
BseBI	CCWGG	2 cut(s)	347, 1328
BseGI	GGATG	6 cut(s)	67, 84, 256, 455, 935, 1186
BseLI	CCNNNNNNNGG	7 cut(s)	410, 431, 670, 759, 954, 1205, 1309
BseMI	GCAATG	1 cut(s)	1071
BseMII	CTCAG	7 cut(s)	508, 591, 655, 683, 1055, 1206, 1452
BseNI	ACTGG	4 cut(s)	100, 169, 964, 1596
BseRI	GAGGAG	3 cut(s)	231, 907, 1426
BseXI	GCAGC	5 cut(s)	315, 604, 632, 705, 1159
BseYI	CCCAGC	1 cut(s)	139
BsgI	GTGCAG	1 cut(s)	37
BshFI	GGCC	8 cut(s)	424, 435, 663, 1052, 1198, 1209, 1314, 1595
BshNI	GGYRCC	2 cut(s)	239, 342
BsiHKAI	GWGCWC	2 cut(s)	678, 1478
BsiHKCI	CYCGRG	1 cut(s)	1576
BsiSI	CCGG	6 cut(s)	285, 1015, 1082, 1092, 1144, 1577
BslFI	GGGAC	1 cut(s)	970
BslI	CCNNNNNNNGG	7 cut(s)	410, 431, 670, 759, 954, 1205, 1309
BsmAI	GTCTC	3 cut(s)	937, 1103, 1231
BsmBI	CGTCTC	2 cut(s)	1103, 1231
BsmFI	GGGAC	1 cut(s)	970
BsnI	GGCC	8 cut(s)	424, 435, 663, 1052, 1198, 1209, 1314, 1595
Bso31I	GGTCTC	1 cut(s)	937
BsoBI	CYCGRG	1 cut(s)	1576
Bsp119I	TTCGAA	5 cut(s)	233, 803, 942, 992, 1251
Bsp1286I	GDGCHC	2 cut(s)	678, 1478
Bsp13I	TCCGGA	1 cut(s)	1014
Bsp1407I	TGTACA	1 cut(s)	1389
Bsp19I	CCATGG	2 cut(s)	1190, 1374
BspACI	CCGC	5 cut(s)	926, 966, 1195, 1303, 1610
BspANI	GGCC	8 cut(s)	424, 435, 663, 1052, 1198, 1209, 1314, 1595
BspCNI	CTCAG	7 cut(s)	507, 590, 654, 682, 1054, 1207, 1451
BspEI	TCCGGA	1 cut(s)	1014
BspHI	TCATGA	1 cut(s)	604
BspLI	GGNNCC	7 cut(s)	196, 241, 344, 368, 964, 1089, 1199
BspMAI	CTGCAG	2 cut(s)	622, 695
BspPI	GGATC	3 cut(s)	109, 1215, 1463
BspQI	GCTCTTC	1 cut(s)	1253
BspT104I	TTCGAA	5 cut(s)	233, 803, 942, 992, 1251
BspT107I	GGYRCC	2 cut(s)	239, 342
BspTNI	GGTCTC	1 cut(s)	937
BsrDI	GCAATG	1 cut(s)	1071
BsrFI	RCCGGY	1 cut(s)	284
BsrGI	TGTACA	1 cut(s)	1389
BsrI	ACTGG	4 cut(s)	100, 169, 964, 1596
BssAI	RCCGGY	1 cut(s)	284
BssNI	GRCGYC	2 cut(s)	240, 1112
BssT1I	CCWWGG	4 cut(s)	118, 430, 1190, 1374
Bst2UI	CCWGG	2 cut(s)	347, 1328
Bst4CI	ACNGT	5 cut(s)	483, 759, 911, 949, 973
Bst6I	CTCTTC	4 cut(s)	603, 845, 876, 1253
BstACI	GRCGYC	2 cut(s)	240, 1112
BstAUI	TGTACA	1 cut(s)	1389
BstBI	TTCGAA	5 cut(s)	233, 803, 942, 992, 1251
BstC8I	GCNNGC	4 cut(s)	987, 1099, 1303, 1478
BstDSI	CCRYGG	4 cut(s)	948, 969, 1190, 1374
BstEII	GGTNACC	1 cut(s)	587
BstF5I	GGATG	6 cut(s)	67, 84, 256, 455, 935, 1186
BstH2I	RGCGCY	1 cut(s)	243
BstHHI	GCGC	1 cut(s)	242
BstMAI	GTCTC	3 cut(s)	937, 1103, 1231
BstMWI	GCNNNNNNNGC	7 cut(s)	874, 995, 1094, 1311, 1473, 1616, 1638
BstNI	CCWGG	2 cut(s)	347, 1328
BstNSI	RCATGY	2 cut(s)	292, 1432
BstPI	GGTNACC	1 cut(s)	587
BstSCI	CCNGG	6 cut(s)	345, 1080, 1090, 1326, 1575, 1576
BstSFI	CTRYAG	2 cut(s)	618, 691
BstV1I	GCAGC	5 cut(s)	315, 604, 632, 705, 1159
BstV2I	GAAGAC	2 cut(s)	792, 807
BstX2I	RGATCY	3 cut(s)	114, 147, 1220
BstXI	CCANNNNNNTGG	1 cut(s)	169
BstYI	RGATCY	3 cut(s)	114, 147, 1220
BsuRI	GGCC	8 cut(s)	424, 435, 663, 1052, 1198, 1209, 1314, 1595
BtgI	CCRYGG	4 cut(s)	948, 969, 1190, 1374
BtgZI	GCGATG	1 cut(s)	1293
BtsCI	GGATG	6 cut(s)	67, 84, 256, 455, 935, 1186
BtsI	GCAGTG	1 cut(s)	25
BtsIMutI	CAGTG	3 cut(s)	25, 162, 764
Cac8I	GCNNGC	4 cut(s)	987, 1099, 1303, 1478
CaiI	CAGNNNCTG	2 cut(s)	626, 959
CciI	TCATGA	1 cut(s)	604
CfoI	GCGC	1 cut(s)	242
Cfr10I	RCCGGY	1 cut(s)	284
Cfr13I	GGNCC	4 cut(s)	221, 662, 1197, 1312
Cfr9I	CCCGGG	1 cut(s)	1576
CseI	GACGC	1 cut(s)	1120
Csp6I	GTAC	8 cut(s)	274, 655, 789, 823, 976, 1270, 1390, 1589
CviQI	GTAC	8 cut(s)	274, 655, 789, 823, 976, 1270, 1390, 1589
DinI	GGCGCC	1 cut(s)	241
EaeI	YGGCCR	1 cut(s)	1593
Eam1104I	CTCTTC	4 cut(s)	603, 845, 876, 1253
EarI	CTCTTC	4 cut(s)	603, 845, 876, 1253
Ecl136II	GAGCTC	1 cut(s)	676
Eco130I	CCWWGG	4 cut(s)	118, 430, 1190, 1374
Eco147I	AGGCCT	1 cut(s)	435
Eco24I	GRGCYC	1 cut(s)	678
Eco31I	GGTCTC	1 cut(s)	937
Eco47I	GGWCC	1 cut(s)	221
Eco53kI	GAGCTC	1 cut(s)	676
Eco88I	CYCGRG	1 cut(s)	1576
Eco91I	GGTNACC	1 cut(s)	587
EcoICRI	GAGCTC	1 cut(s)	676
EcoO109I	RGGNCCY	2 cut(s)	221, 662
EcoO65I	GGTNACC	1 cut(s)	587
EcoRII	CCWGG	2 cut(s)	345, 1326
EcoT14I	CCWWGG	4 cut(s)	118, 430, 1190, 1374
EcoT38I	GRGCYC	1 cut(s)	678
EgeI	GGCGCC	1 cut(s)	241
EheI	GGCGCC	1 cut(s)	241
ErhI	CCWWGG	4 cut(s)	118, 430, 1190, 1374
Esp3I	CGTCTC	2 cut(s)	1103, 1231
FaqI	GGGAC	1 cut(s)	970
FauI	CCCGC	1 cut(s)	1310
FauNDI	CATATG	1 cut(s)	543
FbaI	TGATCA	3 cut(s)	127, 913, 1456
Fnu4HI	GCNGC	8 cut(s)	304, 618, 621, 694, 966, 1148, 1196, 1611
FokI	GGATG	6 cut(s)	71, 74, 243, 442, 922, 1173
FriOI	GRGCYC	1 cut(s)	678
Fsp4HI	GCNGC	8 cut(s)	304, 618, 621, 694, 966, 1148, 1196, 1611
FspBI	CTAG	2 cut(s)	6, 468
GlaI	GCGC	1 cut(s)	241
GluI	GCNGC	8 cut(s)	304, 618, 621, 694, 966, 1148, 1196, 1611
GsaI	CCCAGC	1 cut(s)	143
GsuI	CTGGAG	2 cut(s)	981, 1587
HaeII	RGCGCY	1 cut(s)	243
HaeIII	GGCC	8 cut(s)	424, 435, 663, 1052, 1198, 1209, 1314, 1595
HapII	CCGG	6 cut(s)	285, 1015, 1082, 1092, 1144, 1577
HgaI	GACGC	1 cut(s)	1120
HhaI	GCGC	1 cut(s)	242
Hin1I	GRCGYC	2 cut(s)	240, 1112
Hin6I	GCGC	1 cut(s)	240
HinP1I	GCGC	1 cut(s)	240
HpaII	CCGG	6 cut(s)	285, 1015, 1082, 1092, 1144, 1577
HphI	GGTGA	3 cut(s)	581, 1256, 1369
Hpy166II	GTNNAC	2 cut(s)	105, 976
Hpy8I	GTNNAC	2 cut(s)	105, 976
HpyAV	CCTTC	6 cut(s)	208, 234, 404, 916, 949, 1220
HpyCH4III	ACNGT	5 cut(s)	483, 759, 911, 949, 973
HpyCH4IV	ACGT	1 cut(s)	1204
HpyCH4V	TGCA	7 cut(s)	18, 553, 620, 693, 847, 1352, 1632
HpyF10VI	GCNNNNNNNGC	7 cut(s)	874, 995, 1094, 1311, 1473, 1616, 1638
HpySE526I	ACGT	1 cut(s)	1204
Hsp92I	GRCGYC	2 cut(s)	240, 1112
HspAI	GCGC	1 cut(s)	240
KasI	GGCGCC	1 cut(s)	239
Kpn2I	TCCGGA	1 cut(s)	1014
Ksp22I	TGATCA	3 cut(s)	127, 913, 1456
LguI	GCTCTTC	1 cut(s)	1253
LmnI	GCTCC	7 cut(s)	194, 673, 962, 1017, 1093, 1094, 1408
Lsp1109I	GCAGC	5 cut(s)	315, 604, 632, 705, 1159
LweI	GCATC	2 cut(s)	537, 706
MaeI	CTAG	2 cut(s)	6, 468
MaeII	ACGT	1 cut(s)	1204
MaeIII	GTNAC	2 cut(s)	587, 1447
MflI	RGATCY	3 cut(s)	114, 147, 1220
MhlI	GDGCHC	2 cut(s)	678, 1478
MlsI	TGGCCA	1 cut(s)	1595
MluCI	AATT	3 cut(s)	842, 1336, 1644
MluNI	TGGCCA	1 cut(s)	1595
Mly113I	GGCGCC	1 cut(s)	240
MlyI	GAGTC	5 cut(s)	335, 547, 1192, 1535, 1594
MmeI	TCCRAC	3 cut(s)	104, 273, 1549
Mox20I	TGGCCA	1 cut(s)	1595
MroI	TCCGGA	1 cut(s)	1014
MroXI	GAANNNNTTC	2 cut(s)	101, 1257
MscI	TGGCCA	1 cut(s)	1595
MseI	TTAA	2 cut(s)	680, 1347
MslI	CAYNNNNRTG	5 cut(s)	167, 173, 391, 909, 1481
Msp20I	TGGCCA	1 cut(s)	1595
MspI	CCGG	6 cut(s)	285, 1015, 1082, 1092, 1144, 1577
MspR9I	CCNGG	6 cut(s)	347, 1082, 1092, 1328, 1577, 1578
MvaI	CCWGG	2 cut(s)	347, 1328
MwoI	GCNNNNNNNGC	7 cut(s)	874, 995, 1094, 1311, 1473, 1616, 1638
NarI	GGCGCC	1 cut(s)	240
NciI	CCSGG	4 cut(s)	1082, 1092, 1577, 1578
NcoI	CCATGG	2 cut(s)	1190, 1374
NdeI	CATATG	1 cut(s)	543
NlaIV	GGNNCC	7 cut(s)	196, 241, 344, 368, 964, 1089, 1199
NmeAIII	GCCGAG	2 cut(s)	1096, 1127
NmuCI	GTSAC	2 cut(s)	587, 1447
NspI	RCATGY	2 cut(s)	292, 1432
NspV	TTCGAA	5 cut(s)	233, 803, 942, 992, 1251
OliI	CACNNNNGTG	1 cut(s)	909
PagI	TCATGA	1 cut(s)	604
PceI	AGGCCT	1 cut(s)	435
PciI	ACATGT	1 cut(s)	1428
PciSI	GCTCTTC	1 cut(s)	1253
PcsI	WCGNNNNNNNCGW	1 cut(s)	977
PdmI	GAANNNNTTC	2 cut(s)	101, 1257
PfeI	GAWTC	5 cut(s)	316, 380, 610, 1045, 1126
PflMI	CCANNNNNTGG	1 cut(s)	759
PfoI	TCCNGGA	1 cut(s)	1090
PkrI	GCNGC	8 cut(s)	305, 619, 622, 695, 967, 1149, 1197, 1612
PleI	GAGTC	5 cut(s)	334, 546, 1191, 1535, 1594
PluTI	GGCGCC	1 cut(s)	243
PpsI	GAGTC	5 cut(s)	334, 546, 1191, 1535, 1594
PpuMI	RGGWCCY	1 cut(s)	221
PscI	ACATGT	1 cut(s)	1428
PshBI	ATTAAT	1 cut(s)	1347
Psp124BI	GAGCTC	1 cut(s)	678
Psp5II	RGGWCCY	1 cut(s)	221
Psp6I	CCWGG	2 cut(s)	345, 1326
PspEI	GGTNACC	1 cut(s)	587
PspFI	CCCAGC	1 cut(s)	139
PspGI	CCWGG	2 cut(s)	345, 1326
PspN4I	GGNNCC	7 cut(s)	196, 241, 344, 368, 964, 1089, 1199
PspPI	GGNCC	4 cut(s)	221, 662, 1197, 1312
PspPPI	RGGWCCY	1 cut(s)	221
PstI	CTGCAG	2 cut(s)	622, 695
PstNI	CAGNNNCTG	2 cut(s)	626, 959
PsuI	RGATCY	3 cut(s)	114, 147, 1220
RsaI	GTAC	8 cut(s)	275, 656, 790, 824, 977, 1271, 1391, 1590
RsaNI	GTAC	8 cut(s)	274, 655, 789, 823, 976, 1270, 1390, 1589
RseI	CAYNNNNRTG	5 cut(s)	167, 173, 391, 909, 1481
SacI	GAGCTC	1 cut(s)	678
SapI	GCTCTTC	1 cut(s)	1253
SaqAI	TTAA	2 cut(s)	680, 1347
SatI	GCNGC	8 cut(s)	304, 618, 621, 694, 966, 1148, 1196, 1611
Sau96I	GGNCC	4 cut(s)	221, 662, 1197, 1312
ScaI	AGTACT	3 cut(s)	656, 790, 1590
SchI	GAGTC	5 cut(s)	335, 547, 1192, 1535, 1594
ScrFI	CCNGG	6 cut(s)	347, 1082, 1092, 1328, 1577, 1578
SduI	GDGCHC	2 cut(s)	678, 1478
SfaNI	GCATC	2 cut(s)	537, 706
SfcI	CTRYAG	2 cut(s)	618, 691
SfoI	GGCGCC	1 cut(s)	241
SfuI	TTCGAA	5 cut(s)	233, 803, 942, 992, 1251
SinI	GGWCC	1 cut(s)	221
SmaI	CCCGGG	1 cut(s)	1578
SmiMI	CAYNNNNRTG	5 cut(s)	167, 173, 391, 909, 1481
SmlI	CTYRAG	1 cut(s)	1318
SmoI	CTYRAG	1 cut(s)	1318
Sse9I	AATT	3 cut(s)	842, 1336, 1644
SseBI	AGGCCT	1 cut(s)	435
SsiI	CCGC	5 cut(s)	926, 966, 1195, 1303, 1610
SspDI	GGCGCC	1 cut(s)	239
SspMI	CTAG	2 cut(s)	6, 468
SstI	GAGCTC	1 cut(s)	678
StuI	AGGCCT	1 cut(s)	435
StyD4I	CCNGG	6 cut(s)	345, 1080, 1090, 1326, 1575, 1576
StyI	CCWWGG	4 cut(s)	118, 430, 1190, 1374
TaaI	ACNGT	5 cut(s)	483, 759, 911, 949, 973
TaiI	ACGT	1 cut(s)	1207
TaqI	TCGA	8 cut(s)	233, 803, 831, 942, 980, 992, 1131, 1251
TasI	AATT	3 cut(s)	842, 1336, 1644
TatI	WGTACW	7 cut(s)	273, 654, 788, 822, 975, 1389, 1588
TauI	GCSGC	3 cut(s)	968, 1198, 1613
TfiI	GAWTC	5 cut(s)	316, 380, 610, 1045, 1126
Tru1I	TTAA	2 cut(s)	680, 1347
Tru9I	TTAA	2 cut(s)	680, 1347
TscAI	CASTG	3 cut(s)	25, 169, 764
TseFI	GTSAC	2 cut(s)	587, 1447
TseI	GCWGC	5 cut(s)	303, 617, 620, 693, 1147
Tsp45I	GTSAC	2 cut(s)	587, 1447
TspDTI	ATGAA	8 cut(s)	57, 216, 375, 593, 935, 1184, 1333, 1428
TspGWI	ACGGA	1 cut(s)	1213
TspMI	CCCGGG	1 cut(s)	1576
TspRI	CASTG	3 cut(s)	25, 169, 764
Van91I	CCANNNNNTGG	1 cut(s)	759
VpaK11BI	GGWCC	1 cut(s)	221
VspI	ATTAAT	1 cut(s)	1347
XceI	RCATGY	2 cut(s)	292, 1432
XmaI	CCCGGG	1 cut(s)	1576
XmnI	GAANNNNTTC	2 cut(s)	101, 1257
XspI	CTAG	2 cut(s)	6, 468
ZrmI	AGTACT	3 cut(s)	656, 790, 1590

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.