Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0007311

Physical Location & Seq

Genomic Coordinates Reverse (-)

13554940 .. 13557897

Gene Structure 2958 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G014090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGGCTAGAGAGCTGTGCAGTGAAGATCATAAGTCCTCATCAGTTGGTTTTTGCTACTCGGATGTTTCATCAGCGAATCCAACCATCCACCATCAGAACCAGTTCACAAATCAGATCCAAGGCTTTGATCAGGCAAACCCAGCAGAGATCTTCAACTTGACCACTGGCATGGAGATGATAGGCTTCTCTAAAGGAGCCTTCTTCTCCAAACATGGAGGAGGAGGAGGAGGACCTTCATCTTCGAAAGGCGCCGATCATTTCTACCATCCTCATCAGCAAGAGTACAACACAACCGGCATGTCGGAAACGAGCAGCGAAAACCAGAATCTAATGGAGTCTGGTGGAGCTTGGCACCAGGAGAACAGCAACAATAGGTTCCTTGTTGATGATTCTTCATTGAGGTGTGTTTTCCCATGTGAAGGTAATGAGAGGCCAAGCCAAGGCCTCTCACTCTCTCTTAGCTCATCCAATCCCTCTAGTATTGGCTTACAGTCCTTTGAACTCAGGCAGACAAATCATCATCAAGATATTGGGAGCATCAATCAGAGTCATATGATATTGCAAGATGGGTATTTGGGTAAAAGCTCAGGTCTTGGTCACCAATCTCTTCTTCATGAGAATCAAGCTGCAGCTTCTGGGCTTTTCCAGCTCAGAAACTCAAAGTACTTAGGCCCAGCTCAGGAGCTCTTAAATGAGTTCTGTAGCCTCGGAACAAAGCAGACTGATGCTCTTGGAGTTTCAAAGCACAAGTCAAACAAAACCAAACAGTGGGAAGATCAGGATAACAATAATGGCAGTACTTCTTCGTCTTCGAAAAAGCAGTCTTCCCTGTACTCCCTCGAATTCGTTGAATTGCAGAAGAGAAAAACCAGACTGCTTCAAATGCTGGAAGAGGTGGAGAGGAGATACAAGCACTACTGTGATCAGATGAAGGCTGTGGTCTCATCCTTCGAAACCGTGGCAGGGACTGGAGCCGCCACGGTGTACTCGAAGCTGGCTTCGAAAGCCATGTCAAGACATTTCCGGAGCTTGAAAGACGGGATTAAAGACCCGGTGGCTCCCGGAGCAAGCCGAGGCGAGACACCTCGGCTTCGGATTCTCGACCAAACTCTCCGGCAGCAGAGAGCTTTTCAACAGATGAACATGATGGAGAGTCATCCATGGCGGCCCCAACGTGGCCTTCCTGAGAGATCCGTCTCGGTTCTTCGGGCTTGGCTCTTCGAACACTTTCTTCACCCGTACCCAAGCGATGTTGATAAACATATCTTAGCCCGCCAAACGGGTCTCTCAAGAAGCCAGGTATCAAATTGGTTCATTAATGCAAGGGTGAGGCTTTGGAAACCCATGGTTGAAGAAATGTACATGGAAGAAACAAAGGAGCATGAAAACAACAACATGTCCTCCTCAGATGGTGTCACTACTGATCATCATGGCGATCCGAGCACGCAGATGACACGACCCGAAGATCAGAAACCGACCCAGGACCAACTCCAACTCGTCCGAATAGACTCGGAGTGCCTCTCGTCCATCATCACAAACAACCCAGGTGAGAAAAGTACTGGCCATGACTCCAGAAGCGGCAAAAGCACCCTCCAAATGCACCCACAGCACAATTTCGGGCGGGTAACAGATGCATTCGGATCATCGATGGAGCTGGATTTTTCAACTTACAATCATCATCACCAGTCTGGAAGCGCAGTTACTTATGGTAATGAAAACCCGAACCAGAGCTTCAATGGGGGAGGGCATGGTGTGTCATTGACATTAGGGTTGAACCAGCATGGTGGTACTAATGGGGTGAGCTTAGCATTCTCTCCTTCCTCACAGAACTCTCTCTTCTACCCTAGAGATCACATCGAAGAGTGTCAGCCGGTTCAGTACTCGTCTCTATTAGACGGCGAAGGCCAGAACAATTTGCCTTACAGAAACTTGATGGGTGCTCAGTTGCTCCATGACTTGGCTGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006355 GO:0008150 GO:0009506 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030054 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055044 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

655

Amino Acids

72.78

Weight (kDa)

6.31

Isoelectric Point (pI)

53.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	217 - 348	1.1e-45	Associated with HOX
Homeobox_KN	PF05920	405 - 444	8.2e-19	Homeobox KN domain
Homeodomain	PF00046	412 - 444	4.3e-06	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41410
fragaria_vesca	FvH4_5g02960 FvH4_5g02960 FvH4_5g02960 FvH4_5g02960
malus_domestica	MD06G1088700.v1.1 MD14G1109800.v1.1
prunus_persica	Prupe.5G104600_v2.0.a1 Prupe.5G104600_v2.0.a1
pyrus_communis	pycom06g08460 pycom14g10390
rosa_chinensis	RchiOBHm_Chr7g0196921
rosa_laevigata	RLG00000003980
rosa_multiflora	Rmu_sc0001083.1_g000011
rosa_roxburghii	Rroxscaffold_3G00258870
rosa_rugosa	Rorug07G0036500 Rorug07G0036600 Rorug07G0036700 Rorug07G0036700 Rorug07G0036800
rosa_samantha	Rh7AG161000 Rh7BG163200 Rh7CG169300 Rh7DG162600
rosa_wichuraiana	Rw7G014090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	248, 351
AccB7I	CCANNNNNTGG	2 cut(s)	768, 1957
AccIII	TCCGGA	1 cut(s)	1023
AciI	CCGC	5 cut(s)	975, 1165, 1273, 1578, 1621
AclWI	GGATC	4 cut(s)	109, 1185, 1430, 1648
AcoI	YGGCCR	1 cut(s)	1561
AcsI	RAATTY	1 cut(s)	842
AcyI	GRCGYC	1 cut(s)	249
AfiI	CCNNNNNNNGG	8 cut(s)	419, 440, 679, 768, 963, 1175, 1279, 1957
AflIII	ACRYGT	1 cut(s)	1395
AjnI	CCWGG	4 cut(s)	354, 1296, 1479, 1543
AjuI	GAANNNNNNNTTGG	4 cut(s)	594, 626, 1164, 1196
AleI	CACNNNNGTG	1 cut(s)	918
Alw21I	GWGCWC	3 cut(s)	687, 1445, 1942
Alw26I	GTCTC	5 cut(s)	946, 1073, 1201, 1289, 1890
AlwI	GGATC	4 cut(s)	109, 1185, 1430, 1648
AlwNI	CAGNNNCTG	2 cut(s)	635, 968
Aor13HI	TCCGGA	1 cut(s)	1023
AoxI	GGCC	7 cut(s)	431, 442, 670, 1166, 1177, 1561, 1903
ApeKI	GCWGC	4 cut(s)	312, 626, 629, 1117
ApoI	RAATTY	1 cut(s)	842
ArsI	GACNNNNNNTTYG	6 cut(s)	734, 766, 806, 838, 995, 1027
AseI	ATTAAT	1 cut(s)	1317
Asp700I	GAANNNNTTC	2 cut(s)	101, 1227
AspLEI	GCGC	2 cut(s)	251, 1697
AspS9I	GGNCC	4 cut(s)	230, 671, 1167, 1483
AsuC2I	CCSGG	2 cut(s)	1052, 1062
AsuHPI	GGTGA	6 cut(s)	590, 1226, 1339, 1559, 1673, 1810
AsuII	TTCGAA	5 cut(s)	242, 812, 951, 1001, 1221
AvaII	GGWCC	2 cut(s)	230, 1483
BalI	TGGCCA	1 cut(s)	1563
BanI	GGYRCC	2 cut(s)	248, 351
BanII	GRGCYC	1 cut(s)	687
BarI	GAAGNNNNNNTAC	2 cut(s)	1684, 1716
BbsI	GAAGAC	2 cut(s)	801, 816
Bbv12I	GWGCWC	3 cut(s)	687, 1445, 1942
BbvI	GCAGC	4 cut(s)	324, 613, 641, 1129
BccI	CCATC	9 cut(s)	92, 99, 273, 560, 1141, 1403, 1535, 1642, 1927
BceAI	ACGGC	1 cut(s)	1912
BciT130I	CCWGG	4 cut(s)	356, 1298, 1481, 1545
BclI	TGATCA	3 cut(s)	127, 922, 1423
BcnI	CCSGG	2 cut(s)	1052, 1062
BcoDI	GTCTC	5 cut(s)	946, 1073, 1201, 1289, 1890
BfaI	CTAG	3 cut(s)	6, 477, 1845
BfmI	CTRYAG	2 cut(s)	627, 700
BfoI	RGCGCY	1 cut(s)	252
BglII	AGATCT	1 cut(s)	147
BisI	GCNGC	7 cut(s)	313, 627, 630, 975, 1118, 1166, 1579
BlpI	GCTNAGC	1 cut(s)	1804
BlsI	GCNGC	7 cut(s)	314, 628, 631, 976, 1119, 1167, 1580
BmcAI	AGTACT	4 cut(s)	665, 799, 1558, 1880
Bme1390I	CCNGG	6 cut(s)	356, 1052, 1062, 1298, 1481, 1545
Bme18I	GGWCC	2 cut(s)	230, 1483
BmgT120I	GGNCC	4 cut(s)	230, 671, 1167, 1483
BmiI	GGNNCC	7 cut(s)	196, 250, 353, 377, 973, 1059, 1169
BmrFI	CCNGG	6 cut(s)	356, 1052, 1062, 1298, 1481, 1545
BmsI	GCATC	3 cut(s)	546, 715, 1621
BpiI	GAAGAC	2 cut(s)	801, 816
BplI	GAGNNNNNCTC	2 cut(s)	1505, 1537
BpmI	CTGGAG	2 cut(s)	990, 1555
Bpu10I	CCTNAGC	2 cut(s)	586, 678
Bpu1102I	GCTNAGC	1 cut(s)	1804
Bpu14I	TTCGAA	5 cut(s)	242, 812, 951, 1001, 1221
BpuEI	CTTGAG	1 cut(s)	1273
BpuMI	CCSGG	2 cut(s)	1052, 1062
Bsa29I	ATCGAT	1 cut(s)	1646
BsaHI	GRCGYC	1 cut(s)	249
BsaI	GGTCTC	2 cut(s)	946, 1289
BsaWI	WCCGGW	1 cut(s)	1023
BsaXI	ACNNNNNCTCC	2 cut(s)	1385, 1415
Bsc4I	CCNNNNNNNGG	8 cut(s)	419, 440, 679, 768, 963, 1175, 1279, 1957
Bse118I	RCCGGY	2 cut(s)	293, 1870
Bse1I	ACTGG	5 cut(s)	100, 169, 973, 1564, 1684
BseAI	TCCGGA	1 cut(s)	1023
BseBI	CCWGG	4 cut(s)	356, 1298, 1481, 1545
BseCI	ATCGAT	1 cut(s)	1646
BseGI	GGATG	6 cut(s)	67, 84, 265, 464, 944, 1156
BseLI	CCNNNNNNNGG	8 cut(s)	419, 440, 679, 768, 963, 1175, 1279, 1957
BseMII	CTCAG	7 cut(s)	517, 600, 664, 692, 1176, 1419, 1955
BseNI	ACTGG	5 cut(s)	100, 169, 973, 1564, 1684
BseRI	GAGGAG	6 cut(s)	231, 234, 237, 240, 916, 1393
BseXI	GCAGC	4 cut(s)	324, 613, 641, 1129
BseYI	CCCAGC	2 cut(s)	139, 673
BsgI	GTGCAG	1 cut(s)	37
BshFI	GGCC	7 cut(s)	433, 444, 672, 1168, 1179, 1563, 1905
BshNI	GGYRCC	2 cut(s)	248, 351
BshVI	ATCGAT	1 cut(s)	1646
BsiHKAI	GWGCWC	3 cut(s)	687, 1445, 1942
BsiSI	CCGG	6 cut(s)	294, 1024, 1052, 1062, 1114, 1871
BslFI	GGGAC	1 cut(s)	979
BslI	CCNNNNNNNGG	8 cut(s)	419, 440, 679, 768, 963, 1175, 1279, 1957
BsmAI	GTCTC	5 cut(s)	946, 1073, 1201, 1289, 1890
BsmBI	CGTCTC	2 cut(s)	1201, 1890
BsmFI	GGGAC	1 cut(s)	979
BsmI	GAATGC	2 cut(s)	1634, 1808
BsnI	GGCC	7 cut(s)	433, 444, 672, 1168, 1179, 1563, 1905
Bso31I	GGTCTC	2 cut(s)	946, 1289
Bsp119I	TTCGAA	5 cut(s)	242, 812, 951, 1001, 1221
Bsp1286I	GDGCHC	3 cut(s)	687, 1445, 1942
Bsp13I	TCCGGA	1 cut(s)	1023
Bsp1407I	TGTACA	1 cut(s)	1359
Bsp1720I	GCTNAGC	1 cut(s)	1804
Bsp19I	CCATGG	2 cut(s)	1160, 1344
BspACI	CCGC	5 cut(s)	975, 1165, 1273, 1578, 1621
BspANI	GGCC	7 cut(s)	433, 444, 672, 1168, 1179, 1563, 1905
BspCNI	CTCAG	7 cut(s)	516, 599, 663, 691, 1177, 1418, 1954
BspDI	ATCGAT	1 cut(s)	1646
BspEI	TCCGGA	1 cut(s)	1023
BspHI	TCATGA	1 cut(s)	613
BspLI	GGNNCC	7 cut(s)	196, 250, 353, 377, 973, 1059, 1169
BspMAI	CTGCAG	1 cut(s)	631
BspPI	GGATC	4 cut(s)	109, 1185, 1430, 1648
BspQI	GCTCTTC	1 cut(s)	1223
BspT104I	TTCGAA	5 cut(s)	242, 812, 951, 1001, 1221
BspT107I	GGYRCC	2 cut(s)	248, 351
BspTNI	GGTCTC	2 cut(s)	946, 1289
BsrFI	RCCGGY	2 cut(s)	293, 1870
BsrGI	TGTACA	1 cut(s)	1359
BsrI	ACTGG	5 cut(s)	100, 169, 973, 1564, 1684
BssAI	RCCGGY	2 cut(s)	293, 1870
BssNI	GRCGYC	1 cut(s)	249
BssT1I	CCWWGG	4 cut(s)	118, 439, 1160, 1344
Bst2UI	CCWGG	4 cut(s)	356, 1298, 1481, 1545
Bst4CI	ACNGT	5 cut(s)	492, 768, 920, 958, 982
Bst6I	CTCTTC	6 cut(s)	612, 854, 885, 1223, 1841, 1854
BstACI	GRCGYC	1 cut(s)	249
BstAUI	TGTACA	1 cut(s)	1359
BstBI	TTCGAA	5 cut(s)	242, 812, 951, 1001, 1221
BstC8I	GCNNGC	4 cut(s)	996, 1069, 1273, 1445
BstDSI	CCRYGG	4 cut(s)	957, 978, 1160, 1344
BstEII	GGTNACC	1 cut(s)	596
BstF5I	GGATG	6 cut(s)	67, 84, 265, 464, 944, 1156
BstH2I	RGCGCY	1 cut(s)	252
BstHHI	GCGC	2 cut(s)	251, 1697
BstMAI	GTCTC	5 cut(s)	946, 1073, 1201, 1289, 1890
BstMWI	GCNNNNNNNGC	8 cut(s)	140, 646, 883, 1004, 1064, 1440, 1584, 1606
BstNI	CCWGG	4 cut(s)	356, 1298, 1481, 1545
BstNSI	RCATGY	2 cut(s)	301, 1399
BstPI	GGTNACC	1 cut(s)	596
BstSCI	CCNGG	6 cut(s)	354, 1050, 1060, 1296, 1479, 1543
BstSFI	CTRYAG	2 cut(s)	627, 700
BstV1I	GCAGC	4 cut(s)	324, 613, 641, 1129
BstV2I	GAAGAC	2 cut(s)	801, 816
BstX2I	RGATCY	3 cut(s)	114, 147, 1190
BstXI	CCANNNNNNTGG	2 cut(s)	169, 1784
BstYI	RGATCY	3 cut(s)	114, 147, 1190
Bsu15I	ATCGAT	1 cut(s)	1646
BsuRI	GGCC	7 cut(s)	433, 444, 672, 1168, 1179, 1563, 1905
BsuTUI	ATCGAT	1 cut(s)	1646
BtgI	CCRYGG	4 cut(s)	957, 978, 1160, 1344
BtgZI	GCGATG	1 cut(s)	1263
BtsCI	GGATG	6 cut(s)	67, 84, 265, 464, 944, 1156
BtsI	GCAGTG	1 cut(s)	25
BtsIMutI	CAGTG	3 cut(s)	25, 162, 773
Cac8I	GCNNGC	4 cut(s)	996, 1069, 1273, 1445
CaiI	CAGNNNCTG	2 cut(s)	635, 968
CciI	TCATGA	1 cut(s)	613
CfoI	GCGC	2 cut(s)	251, 1697
Cfr10I	RCCGGY	2 cut(s)	293, 1870
Cfr13I	GGNCC	4 cut(s)	230, 671, 1167, 1483
ClaI	ATCGAT	1 cut(s)	1646
DinI	GGCGCC	1 cut(s)	250
EaeI	YGGCCR	1 cut(s)	1561
Eam1104I	CTCTTC	6 cut(s)	612, 854, 885, 1223, 1841, 1854
EarI	CTCTTC	6 cut(s)	612, 854, 885, 1223, 1841, 1854
Ecl136II	GAGCTC	1 cut(s)	685
Eco130I	CCWWGG	4 cut(s)	118, 439, 1160, 1344
Eco147I	AGGCCT	1 cut(s)	444
Eco24I	GRGCYC	1 cut(s)	687
Eco31I	GGTCTC	2 cut(s)	946, 1289
Eco47I	GGWCC	2 cut(s)	230, 1483
Eco53kI	GAGCTC	1 cut(s)	685
Eco91I	GGTNACC	1 cut(s)	596
EcoICRI	GAGCTC	1 cut(s)	685
EcoO109I	RGGNCCY	1 cut(s)	230
EcoO65I	GGTNACC	1 cut(s)	596
EcoRI	GAATTC	1 cut(s)	842
EcoRII	CCWGG	4 cut(s)	354, 1296, 1479, 1543
EcoT14I	CCWWGG	4 cut(s)	118, 439, 1160, 1344
EcoT22I	ATGCAT	1 cut(s)	1636
EcoT38I	GRGCYC	1 cut(s)	687
EgeI	GGCGCC	1 cut(s)	250
EheI	GGCGCC	1 cut(s)	250
ErhI	CCWWGG	4 cut(s)	118, 439, 1160, 1344
Esp3I	CGTCTC	2 cut(s)	1201, 1890
FaqI	GGGAC	1 cut(s)	979
FauI	CCCGC	2 cut(s)	1280, 1614
FauNDI	CATATG	1 cut(s)	552
FbaI	TGATCA	3 cut(s)	127, 922, 1423
Fnu4HI	GCNGC	7 cut(s)	313, 627, 630, 975, 1118, 1166, 1579
FokI	GGATG	6 cut(s)	71, 74, 252, 451, 931, 1143
FriOI	GRGCYC	1 cut(s)	687
Fsp4HI	GCNGC	7 cut(s)	313, 627, 630, 975, 1118, 1166, 1579
FspBI	CTAG	3 cut(s)	6, 477, 1845
GlaI	GCGC	2 cut(s)	250, 1696
GluI	GCNGC	7 cut(s)	313, 627, 630, 975, 1118, 1166, 1579
GsaI	CCCAGC	2 cut(s)	143, 677
GsuI	CTGGAG	2 cut(s)	990, 1555
HaeII	RGCGCY	1 cut(s)	252
HaeIII	GGCC	7 cut(s)	433, 444, 672, 1168, 1179, 1563, 1905
HapII	CCGG	6 cut(s)	294, 1024, 1052, 1062, 1114, 1871
HhaI	GCGC	2 cut(s)	251, 1697
Hin1I	GRCGYC	1 cut(s)	249
Hin6I	GCGC	2 cut(s)	249, 1695
HinP1I	GCGC	2 cut(s)	249, 1695
HpaII	CCGG	6 cut(s)	294, 1024, 1052, 1062, 1114, 1871
HphI	GGTGA	6 cut(s)	590, 1226, 1339, 1559, 1673, 1810
Hpy166II	GTNNAC	2 cut(s)	105, 985
Hpy8I	GTNNAC	2 cut(s)	105, 985
HpyAV	CCTTC	8 cut(s)	208, 243, 413, 925, 958, 1190, 1827, 1895
HpyCH4III	ACNGT	5 cut(s)	492, 768, 920, 958, 982
HpyCH4IV	ACGT	1 cut(s)	1174
HpyCH4V	TGCA	7 cut(s)	18, 562, 629, 856, 1322, 1600, 1634
HpyF10VI	GCNNNNNNNGC	8 cut(s)	140, 646, 883, 1004, 1064, 1440, 1584, 1606
HpySE526I	ACGT	1 cut(s)	1174
Hsp92I	GRCGYC	1 cut(s)	249
HspAI	GCGC	2 cut(s)	249, 1695
KasI	GGCGCC	1 cut(s)	248
Kpn2I	TCCGGA	1 cut(s)	1023
Ksp22I	TGATCA	3 cut(s)	127, 922, 1423
LguI	GCTCTTC	1 cut(s)	1223
Lsp1109I	GCAGC	4 cut(s)	324, 613, 641, 1129
LweI	GCATC	3 cut(s)	546, 715, 1621
MaeI	CTAG	3 cut(s)	6, 477, 1845
MaeII	ACGT	1 cut(s)	1174
MaeIII	GTNAC	4 cut(s)	596, 1414, 1624, 1699
MflI	RGATCY	3 cut(s)	114, 147, 1190
MhlI	GDGCHC	3 cut(s)	687, 1445, 1942
MlsI	TGGCCA	1 cut(s)	1563
MluCI	AATT	5 cut(s)	842, 851, 1306, 1612, 1912
MluNI	TGGCCA	1 cut(s)	1563
Mly113I	GGCGCC	1 cut(s)	249
MlyI	GAGTC	5 cut(s)	344, 556, 1162, 1502, 1562
MmeI	TCCRAC	3 cut(s)	104, 282, 1516
Mox20I	TGGCCA	1 cut(s)	1563
Mph1103I	ATGCAT	1 cut(s)	1636
MroI	TCCGGA	1 cut(s)	1023
MroXI	GAANNNNTTC	2 cut(s)	101, 1227
MscI	TGGCCA	1 cut(s)	1563
MseI	TTAA	3 cut(s)	689, 1044, 1317
MslI	CAYNNNNRTG	5 cut(s)	167, 173, 400, 918, 1448
Msp20I	TGGCCA	1 cut(s)	1563
MspI	CCGG	6 cut(s)	294, 1024, 1052, 1062, 1114, 1871
MspR9I	CCNGG	6 cut(s)	356, 1052, 1062, 1298, 1481, 1545
Mva1269I	GAATGC	2 cut(s)	1634, 1808
MvaI	CCWGG	4 cut(s)	356, 1298, 1481, 1545
MwoI	GCNNNNNNNGC	8 cut(s)	140, 646, 883, 1004, 1064, 1440, 1584, 1606
NarI	GGCGCC	1 cut(s)	249
NciI	CCSGG	2 cut(s)	1052, 1062
NcoI	CCATGG	2 cut(s)	1160, 1344
NdeI	CATATG	1 cut(s)	552
NlaIV	GGNNCC	7 cut(s)	196, 250, 353, 377, 973, 1059, 1169
NmeAIII	GCCGAG	2 cut(s)	1066, 1097
NmuCI	GTSAC	2 cut(s)	596, 1414
NsiI	ATGCAT	1 cut(s)	1636
NspI	RCATGY	2 cut(s)	301, 1399
NspV	TTCGAA	5 cut(s)	242, 812, 951, 1001, 1221
OliI	CACNNNNGTG	1 cut(s)	918
PagI	TCATGA	1 cut(s)	613
PceI	AGGCCT	1 cut(s)	444
PciI	ACATGT	1 cut(s)	1395
PciSI	GCTCTTC	1 cut(s)	1223
PcsI	WCGNNNNNNNCGW	1 cut(s)	986
PctI	GAATGC	2 cut(s)	1634, 1808
PdmI	GAANNNNTTC	2 cut(s)	101, 1227
PfeI	GAWTC	5 cut(s)	76, 325, 389, 619, 1096
PflMI	CCANNNNNTGG	2 cut(s)	768, 1957
PfoI	TCCNGGA	1 cut(s)	1060
PkrI	GCNGC	7 cut(s)	314, 628, 631, 976, 1119, 1167, 1580
PleI	GAGTC	5 cut(s)	343, 555, 1161, 1502, 1562
PluTI	GGCGCC	1 cut(s)	252
PpsI	GAGTC	5 cut(s)	343, 555, 1161, 1502, 1562
PpuMI	RGGWCCY	1 cut(s)	230
PscI	ACATGT	1 cut(s)	1395
PshBI	ATTAAT	1 cut(s)	1317
Psp124BI	GAGCTC	1 cut(s)	687
Psp5II	RGGWCCY	1 cut(s)	230
Psp6I	CCWGG	4 cut(s)	354, 1296, 1479, 1543
PspEI	GGTNACC	1 cut(s)	596
PspFI	CCCAGC	2 cut(s)	139, 673
PspGI	CCWGG	4 cut(s)	354, 1296, 1479, 1543
PspN4I	GGNNCC	7 cut(s)	196, 250, 353, 377, 973, 1059, 1169
PspPI	GGNCC	4 cut(s)	230, 671, 1167, 1483
PspPPI	RGGWCCY	1 cut(s)	230
PstI	CTGCAG	1 cut(s)	631
PstNI	CAGNNNCTG	2 cut(s)	635, 968
PsuI	RGATCY	3 cut(s)	114, 147, 1190
RseI	CAYNNNNRTG	5 cut(s)	167, 173, 400, 918, 1448
SacI	GAGCTC	1 cut(s)	687
SapI	GCTCTTC	1 cut(s)	1223
SaqAI	TTAA	3 cut(s)	689, 1044, 1317
SatI	GCNGC	7 cut(s)	313, 627, 630, 975, 1118, 1166, 1579
Sau96I	GGNCC	4 cut(s)	230, 671, 1167, 1483
ScaI	AGTACT	4 cut(s)	665, 799, 1558, 1880
SchI	GAGTC	5 cut(s)	344, 556, 1162, 1502, 1562
ScrFI	CCNGG	6 cut(s)	356, 1052, 1062, 1298, 1481, 1545
SduI	GDGCHC	3 cut(s)	687, 1445, 1942
SfaNI	GCATC	3 cut(s)	546, 715, 1621
SfcI	CTRYAG	2 cut(s)	627, 700
SfoI	GGCGCC	1 cut(s)	250
SfuI	TTCGAA	5 cut(s)	242, 812, 951, 1001, 1221
SinI	GGWCC	2 cut(s)	230, 1483
SmiMI	CAYNNNNRTG	5 cut(s)	167, 173, 400, 918, 1448
SmlI	CTYRAG	1 cut(s)	1288
SmoI	CTYRAG	1 cut(s)	1288
Sse9I	AATT	5 cut(s)	842, 851, 1306, 1612, 1912
SseBI	AGGCCT	1 cut(s)	444
SsiI	CCGC	5 cut(s)	975, 1165, 1273, 1578, 1621
SspDI	GGCGCC	1 cut(s)	248
SspMI	CTAG	3 cut(s)	6, 477, 1845
SstI	GAGCTC	1 cut(s)	687
StuI	AGGCCT	1 cut(s)	444
StyD4I	CCNGG	6 cut(s)	354, 1050, 1060, 1296, 1479, 1543
StyI	CCWWGG	4 cut(s)	118, 439, 1160, 1344
TaaI	ACNGT	5 cut(s)	492, 768, 920, 958, 982
TaiI	ACGT	1 cut(s)	1177
TasI	AATT	5 cut(s)	842, 851, 1306, 1612, 1912
TatI	WGTACW	8 cut(s)	282, 663, 797, 831, 984, 1359, 1556, 1878
TauI	GCSGC	3 cut(s)	977, 1168, 1581
TfiI	GAWTC	5 cut(s)	76, 325, 389, 619, 1096
Tru1I	TTAA	3 cut(s)	689, 1044, 1317
Tru9I	TTAA	3 cut(s)	689, 1044, 1317
TscAI	CASTG	3 cut(s)	25, 169, 773
TseFI	GTSAC	2 cut(s)	596, 1414
TseI	GCWGC	4 cut(s)	312, 626, 629, 1117
Tsp45I	GTSAC	2 cut(s)	596, 1414
TspDTI	ATGAA	9 cut(s)	57, 225, 384, 602, 944, 1154, 1303, 1398, 1728
TspGWI	ACGGA	1 cut(s)	1183
TspRI	CASTG	3 cut(s)	25, 169, 773
Van91I	CCANNNNNTGG	2 cut(s)	768, 1957
VpaK11BI	GGWCC	2 cut(s)	230, 1483
VspI	ATTAAT	1 cut(s)	1317
XapI	RAATTY	1 cut(s)	842
XceI	RCATGY	2 cut(s)	301, 1399
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1733, 1958
XmnI	GAANNNNTTC	2 cut(s)	101, 1227
XspI	CTAG	3 cut(s)	6, 477, 1845
ZrmI	AGTACT	4 cut(s)	665, 799, 1558, 1880
Zsp2I	ATGCAT	1 cut(s)	1636

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.