Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001083.1

Orthogroup ID

OG0007311

Physical Location & Seq

Genomic Coordinates Forward (+)

87284 .. 90280

Gene Structure 2997 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001083.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

atggctagagagctgtgcagtgaagatcataagtcctcatcagttggtttttgctactcggatgtttcatcagcgaatccaaccatccaccatcagaaccagttcacaaatcagatccaaggctttgatcagtcaaacccagcagagatcttcaacttgaccactggcatggagatgataggcttctctaaaggagccttcttctccaaacatggaggaggaggaggaggaccttcatcttcgaaaggcgccgatcatttctaccatcctcatcagcaagagtacaacacaaccggcatgtcggaagcgagcagcgaaaaccagaatctaatggagtctggtggagcttggcaccaggagaacagcaacaataggttccttgttgatgattcttcattgaggcagacaaatcatcatcaagatattgggagcatcaatcagagtcatatgatattgcaagatgggtatttgggtaaaagctcaggtcttggtcaccaatctcttcttcatgagaatcaagctgcagcttctgggcttttccagctcagaaactcaaagtacttaggcccagctcaggagctcttaaatgagttctgtagcctcggaacaaagcagactgatgctcttggagtttcaaagcacaagtcaaacaaaaccaaacagtgggaagatcaggataataataatggcagtacttcttcgtcttcgaaaaagcagtcttccctgtactccctcgaattcgttgaattgcagaagagaaaaaccagactgcttcaaatgctggaagaggtggagaggagatacaagcactactgtgatcagatgaaggctgtggtctcatccttcgaaaccgtggcagggactggagccgccacggtgtactctaagctggcttcgaaagccatgtcaagacatttccggagcttgaaagacgggattgtagctcagattcaggccacaaggaaagcaatgggggagaaagacccggtggctcccggagcaagccgaggcgagacgcctcggcttcggattctcgaccaaactctccggcagcagagagcttttcaacagatgaacatgatggagagtcatccatggcggccccaacgtggccttcctgagagatccgtctcggttcttcgggcttggctcttcgaacactttcttcacccgtacccaagcgatgttgataaacatatcttagcccgccaaacgggtctctcaagaagccaggtatcaaattggttcattaatgcaagggtgaggctttggaaacccatggttgaagaaatgtacatggaagaaacaaaggaacatgaaaacaacaacaacatgtcctcctcagatggtgtcactactgatcatcatggcgatccgagcacgcagatgacacgacccgaagatcagaaaccgacccaggaccaactccaactcgtccgaatagactcggagtgcctctcgtccatcatcacaaacaacccaggtgagaaaagtactggccatgactccagaagcggaaaaagcgccctccaaatgcacccacagcacaatttcgggcgggtaacagatgcattcggatcatcgatggagctggatttttcaacttacaatcatcatcaccagtctggaggcgcagttacttatggtaatgaaaacccgaaccagagcttcaatgggggagggcatggtgtgtcattgacattagggttgaaccagcatggtggtactaatggggtgagcttagcattctctccttcctcacagagctctctcttctaccctagagatcacatcgaagagtgtcagccggttcagtactcgtctctattagacggcgaaggccagaacaatttgccttacagaaacttgatgggtgctcagttgctccatgacttggctggttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006355 GO:0008150 GO:0009506 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030054 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055044 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

634

Amino Acids

70.47

Weight (kDa)

6.42

Isoelectric Point (pI)

52.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41410
fragaria_vesca	FvH4_5g02960 FvH4_5g02960 FvH4_5g02960 FvH4_5g02960
malus_domestica	MD06G1088700.v1.1 MD14G1109800.v1.1
prunus_persica	Prupe.5G104600_v2.0.a1 Prupe.5G104600_v2.0.a1
pyrus_communis	pycom06g08460 pycom14g10390
rosa_chinensis	RchiOBHm_Chr7g0196921
rosa_laevigata	RLG00000003980
rosa_multiflora	Rmu_sc0001083.1_g000011
rosa_roxburghii	Rroxscaffold_3G00258870
rosa_rugosa	Rorug07G0036500 Rorug07G0036600 Rorug07G0036700 Rorug07G0036700 Rorug07G0036800
rosa_samantha	Rh7AG161000 Rh7BG163200 Rh7CG169300 Rh7DG162600
rosa_wichuraiana	Rw7G014090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	248, 351
AccB7I	CCANNNNNTGG	2 cut(s)	663, 1894
AccIII	TCCGGA	1 cut(s)	918
AciI	CCGC	5 cut(s)	870, 1099, 1207, 1515, 1558
AclWI	GGATC	4 cut(s)	109, 1119, 1367, 1585
AcoI	YGGCCR	1 cut(s)	1498
AcsI	RAATTY	1 cut(s)	737
AcyI	GRCGYC	2 cut(s)	249, 1016
AfiI	CCNNNNNNNGG	6 cut(s)	574, 663, 858, 1109, 1213, 1894
AflIII	ACRYGT	1 cut(s)	1332
AjnI	CCWGG	4 cut(s)	354, 1230, 1416, 1480
AjuI	GAANNNNNNNTTGG	4 cut(s)	489, 521, 1098, 1130
AleI	CACNNNNGTG	1 cut(s)	813
Alw21I	GWGCWC	4 cut(s)	582, 1382, 1769, 1879
Alw26I	GTCTC	5 cut(s)	841, 1007, 1135, 1223, 1827
AlwI	GGATC	4 cut(s)	109, 1119, 1367, 1585
AlwNI	CAGNNNCTG	2 cut(s)	530, 863
Aor13HI	TCCGGA	1 cut(s)	918
AoxI	GGCC	6 cut(s)	565, 954, 1100, 1111, 1498, 1840
ApeKI	GCWGC	4 cut(s)	312, 521, 524, 1051
ApoI	RAATTY	1 cut(s)	737
ArsI	GACNNNNNNTTYG	6 cut(s)	629, 661, 701, 733, 890, 922
AseI	ATTAAT	1 cut(s)	1251
Asp700I	GAANNNNTTC	2 cut(s)	101, 1161
AspLEI	GCGC	3 cut(s)	251, 1526, 1634
AspS9I	GGNCC	4 cut(s)	230, 566, 1101, 1420
AsuC2I	CCSGG	2 cut(s)	986, 996
AsuHPI	GGTGA	6 cut(s)	485, 1160, 1273, 1496, 1610, 1747
AsuII	TTCGAA	5 cut(s)	242, 707, 846, 896, 1155
AvaII	GGWCC	2 cut(s)	230, 1420
BalI	TGGCCA	1 cut(s)	1500
BanI	GGYRCC	2 cut(s)	248, 351
BanII	GRGCYC	2 cut(s)	582, 1769
BbsI	GAAGAC	2 cut(s)	696, 711
Bbv12I	GWGCWC	4 cut(s)	582, 1382, 1769, 1879
BbvI	GCAGC	4 cut(s)	324, 508, 536, 1063
BccI	CCATC	9 cut(s)	92, 99, 273, 455, 1075, 1340, 1472, 1579, 1864
BceAI	ACGGC	1 cut(s)	1849
BciT130I	CCWGG	4 cut(s)	356, 1232, 1418, 1482
BclI	TGATCA	3 cut(s)	127, 817, 1360
BcnI	CCSGG	2 cut(s)	986, 996
BcoDI	GTCTC	5 cut(s)	841, 1007, 1135, 1223, 1827
BfaI	CTAG	2 cut(s)	6, 1782
BfmI	CTRYAG	2 cut(s)	522, 595
BfoI	RGCGCY	2 cut(s)	252, 1527
BglII	AGATCT	1 cut(s)	147
BisI	GCNGC	6 cut(s)	313, 522, 525, 870, 1052, 1100
BlpI	GCTNAGC	1 cut(s)	1741
BlsI	GCNGC	6 cut(s)	314, 523, 526, 871, 1053, 1101
BmcAI	AGTACT	4 cut(s)	560, 694, 1495, 1817
Bme1390I	CCNGG	6 cut(s)	356, 986, 996, 1232, 1418, 1482
Bme18I	GGWCC	2 cut(s)	230, 1420
BmgT120I	GGNCC	4 cut(s)	230, 566, 1101, 1420
BmiI	GGNNCC	7 cut(s)	196, 250, 353, 377, 868, 993, 1103
BmrFI	CCNGG	6 cut(s)	356, 986, 996, 1232, 1418, 1482
BmsI	GCATC	3 cut(s)	441, 610, 1558
BpiI	GAAGAC	2 cut(s)	696, 711
BplI	GAGNNNNNCTC	2 cut(s)	1442, 1474
BpmI	CTGGAG	3 cut(s)	885, 1492, 1647
Bpu10I	CCTNAGC	2 cut(s)	481, 573
Bpu1102I	GCTNAGC	1 cut(s)	1741
Bpu14I	TTCGAA	5 cut(s)	242, 707, 846, 896, 1155
BpuEI	CTTGAG	1 cut(s)	1207
BpuMI	CCSGG	2 cut(s)	986, 996
Bsa29I	ATCGAT	1 cut(s)	1583
BsaHI	GRCGYC	2 cut(s)	249, 1016
BsaI	GGTCTC	2 cut(s)	841, 1223
BsaWI	WCCGGW	1 cut(s)	918
BsaXI	ACNNNNNCTCC	4 cut(s)	1322, 1352, 1620, 1650
Bsc4I	CCNNNNNNNGG	6 cut(s)	574, 663, 858, 1109, 1213, 1894
Bse118I	RCCGGY	2 cut(s)	293, 1807
Bse1I	ACTGG	5 cut(s)	100, 169, 868, 1501, 1621
Bse3DI	GCAATG	1 cut(s)	975
BseAI	TCCGGA	1 cut(s)	918
BseBI	CCWGG	4 cut(s)	356, 1232, 1418, 1482
BseCI	ATCGAT	1 cut(s)	1583
BseGI	GGATG	5 cut(s)	67, 84, 265, 839, 1090
BseLI	CCNNNNNNNGG	6 cut(s)	574, 663, 858, 1109, 1213, 1894
BseMI	GCAATG	1 cut(s)	975
BseMII	CTCAG	7 cut(s)	495, 559, 587, 959, 1110, 1356, 1892
BseNI	ACTGG	5 cut(s)	100, 169, 868, 1501, 1621
BseRI	GAGGAG	6 cut(s)	231, 234, 237, 240, 811, 1330
BseXI	GCAGC	4 cut(s)	324, 508, 536, 1063
BseYI	CCCAGC	2 cut(s)	139, 568
BsgI	GTGCAG	1 cut(s)	37
BshFI	GGCC	6 cut(s)	567, 956, 1102, 1113, 1500, 1842
BshNI	GGYRCC	2 cut(s)	248, 351
BshVI	ATCGAT	1 cut(s)	1583
BsiHKAI	GWGCWC	4 cut(s)	582, 1382, 1769, 1879
BsiSI	CCGG	6 cut(s)	294, 919, 986, 996, 1048, 1808
BslFI	GGGAC	1 cut(s)	874
BslI	CCNNNNNNNGG	6 cut(s)	574, 663, 858, 1109, 1213, 1894
BsmAI	GTCTC	5 cut(s)	841, 1007, 1135, 1223, 1827
BsmBI	CGTCTC	3 cut(s)	1007, 1135, 1827
BsmFI	GGGAC	1 cut(s)	874
BsmI	GAATGC	2 cut(s)	1571, 1745
BsnI	GGCC	6 cut(s)	567, 956, 1102, 1113, 1500, 1842
Bso31I	GGTCTC	2 cut(s)	841, 1223
Bsp119I	TTCGAA	5 cut(s)	242, 707, 846, 896, 1155
Bsp1286I	GDGCHC	4 cut(s)	582, 1382, 1769, 1879
Bsp13I	TCCGGA	1 cut(s)	918
Bsp1407I	TGTACA	1 cut(s)	1293
Bsp1720I	GCTNAGC	1 cut(s)	1741
Bsp19I	CCATGG	2 cut(s)	1094, 1278
BspACI	CCGC	5 cut(s)	870, 1099, 1207, 1515, 1558
BspANI	GGCC	6 cut(s)	567, 956, 1102, 1113, 1500, 1842
BspCNI	CTCAG	7 cut(s)	494, 558, 586, 958, 1111, 1355, 1891
BspDI	ATCGAT	1 cut(s)	1583
BspEI	TCCGGA	1 cut(s)	918
BspHI	TCATGA	1 cut(s)	508
BspLI	GGNNCC	7 cut(s)	196, 250, 353, 377, 868, 993, 1103
BspMAI	CTGCAG	1 cut(s)	526
BspPI	GGATC	4 cut(s)	109, 1119, 1367, 1585
BspQI	GCTCTTC	1 cut(s)	1157
BspT104I	TTCGAA	5 cut(s)	242, 707, 846, 896, 1155
BspT107I	GGYRCC	2 cut(s)	248, 351
BspTNI	GGTCTC	2 cut(s)	841, 1223
BsrDI	GCAATG	1 cut(s)	975
BsrFI	RCCGGY	2 cut(s)	293, 1807
BsrGI	TGTACA	1 cut(s)	1293
BsrI	ACTGG	5 cut(s)	100, 169, 868, 1501, 1621
BssAI	RCCGGY	2 cut(s)	293, 1807
BssNI	GRCGYC	2 cut(s)	249, 1016
BssT1I	CCWWGG	3 cut(s)	118, 1094, 1278
Bst2UI	CCWGG	4 cut(s)	356, 1232, 1418, 1482
Bst4CI	ACNGT	4 cut(s)	663, 815, 853, 877
Bst6I	CTCTTC	6 cut(s)	507, 749, 780, 1157, 1778, 1791
BstACI	GRCGYC	2 cut(s)	249, 1016
BstAUI	TGTACA	1 cut(s)	1293
BstBI	TTCGAA	5 cut(s)	242, 707, 846, 896, 1155
BstC8I	GCNNGC	5 cut(s)	310, 891, 1003, 1207, 1382
BstDSI	CCRYGG	4 cut(s)	852, 873, 1094, 1278
BstEII	GGTNACC	1 cut(s)	491
BstF5I	GGATG	5 cut(s)	67, 84, 265, 839, 1090
BstH2I	RGCGCY	2 cut(s)	252, 1527
BstHHI	GCGC	3 cut(s)	251, 1526, 1634
BstMAI	GTCTC	5 cut(s)	841, 1007, 1135, 1223, 1827
BstMWI	GCNNNNNNNGC	7 cut(s)	541, 778, 899, 998, 1377, 1521, 1543
BstNI	CCWGG	4 cut(s)	356, 1232, 1418, 1482
BstNSI	RCATGY	2 cut(s)	301, 1336
BstPI	GGTNACC	1 cut(s)	491
BstSCI	CCNGG	6 cut(s)	354, 984, 994, 1230, 1416, 1480
BstSFI	CTRYAG	2 cut(s)	522, 595
BstV1I	GCAGC	4 cut(s)	324, 508, 536, 1063
BstV2I	GAAGAC	2 cut(s)	696, 711
BstX2I	RGATCY	3 cut(s)	114, 147, 1124
BstXI	CCANNNNNNTGG	2 cut(s)	169, 1721
BstYI	RGATCY	3 cut(s)	114, 147, 1124
Bsu15I	ATCGAT	1 cut(s)	1583
BsuRI	GGCC	6 cut(s)	567, 956, 1102, 1113, 1500, 1842
BsuTUI	ATCGAT	1 cut(s)	1583
BtgI	CCRYGG	4 cut(s)	852, 873, 1094, 1278
BtgZI	GCGATG	1 cut(s)	1197
BtsCI	GGATG	5 cut(s)	67, 84, 265, 839, 1090
BtsI	GCAGTG	1 cut(s)	25
BtsIMutI	CAGTG	3 cut(s)	25, 162, 668
Cac8I	GCNNGC	5 cut(s)	310, 891, 1003, 1207, 1382
CaiI	CAGNNNCTG	2 cut(s)	530, 863
CciI	TCATGA	1 cut(s)	508
CfoI	GCGC	3 cut(s)	251, 1526, 1634
Cfr10I	RCCGGY	2 cut(s)	293, 1807
Cfr13I	GGNCC	4 cut(s)	230, 566, 1101, 1420
ClaI	ATCGAT	1 cut(s)	1583
CseI	GACGC	1 cut(s)	1024
DinI	GGCGCC	1 cut(s)	250
EaeI	YGGCCR	1 cut(s)	1498
Eam1104I	CTCTTC	6 cut(s)	507, 749, 780, 1157, 1778, 1791
EarI	CTCTTC	6 cut(s)	507, 749, 780, 1157, 1778, 1791
Ecl136II	GAGCTC	2 cut(s)	580, 1767
Eco130I	CCWWGG	3 cut(s)	118, 1094, 1278
Eco24I	GRGCYC	2 cut(s)	582, 1769
Eco31I	GGTCTC	2 cut(s)	841, 1223
Eco47I	GGWCC	2 cut(s)	230, 1420
Eco53kI	GAGCTC	2 cut(s)	580, 1767
Eco91I	GGTNACC	1 cut(s)	491
EcoICRI	GAGCTC	2 cut(s)	580, 1767
EcoO109I	RGGNCCY	1 cut(s)	230
EcoO65I	GGTNACC	1 cut(s)	491
EcoRI	GAATTC	1 cut(s)	737
EcoRII	CCWGG	4 cut(s)	354, 1230, 1416, 1480
EcoT14I	CCWWGG	3 cut(s)	118, 1094, 1278
EcoT22I	ATGCAT	1 cut(s)	1573
EcoT38I	GRGCYC	2 cut(s)	582, 1769
EgeI	GGCGCC	1 cut(s)	250
EheI	GGCGCC	1 cut(s)	250
ErhI	CCWWGG	3 cut(s)	118, 1094, 1278
Esp3I	CGTCTC	3 cut(s)	1007, 1135, 1827
FaqI	GGGAC	1 cut(s)	874
FauI	CCCGC	2 cut(s)	1214, 1551
FauNDI	CATATG	1 cut(s)	447
FbaI	TGATCA	3 cut(s)	127, 817, 1360
Fnu4HI	GCNGC	6 cut(s)	313, 522, 525, 870, 1052, 1100
FokI	GGATG	5 cut(s)	71, 74, 252, 826, 1077
FriOI	GRGCYC	2 cut(s)	582, 1769
Fsp4HI	GCNGC	6 cut(s)	313, 522, 525, 870, 1052, 1100
FspBI	CTAG	2 cut(s)	6, 1782
GlaI	GCGC	3 cut(s)	250, 1525, 1633
GluI	GCNGC	6 cut(s)	313, 522, 525, 870, 1052, 1100
GsaI	CCCAGC	2 cut(s)	143, 572
GsuI	CTGGAG	3 cut(s)	885, 1492, 1647
HaeII	RGCGCY	2 cut(s)	252, 1527
HaeIII	GGCC	6 cut(s)	567, 956, 1102, 1113, 1500, 1842
HapII	CCGG	6 cut(s)	294, 919, 986, 996, 1048, 1808
HgaI	GACGC	1 cut(s)	1024
HhaI	GCGC	3 cut(s)	251, 1526, 1634
Hin1I	GRCGYC	2 cut(s)	249, 1016
Hin6I	GCGC	3 cut(s)	249, 1524, 1632
HinP1I	GCGC	3 cut(s)	249, 1524, 1632
HpaII	CCGG	6 cut(s)	294, 919, 986, 996, 1048, 1808
HphI	GGTGA	6 cut(s)	485, 1160, 1273, 1496, 1610, 1747
Hpy166II	GTNNAC	2 cut(s)	105, 880
Hpy8I	GTNNAC	2 cut(s)	105, 880
HpyAV	CCTTC	7 cut(s)	208, 243, 820, 853, 1124, 1764, 1832
HpyCH4III	ACNGT	4 cut(s)	663, 815, 853, 877
HpyCH4IV	ACGT	1 cut(s)	1108
HpyCH4V	TGCA	7 cut(s)	18, 457, 524, 751, 1256, 1537, 1571
HpyF10VI	GCNNNNNNNGC	7 cut(s)	541, 778, 899, 998, 1377, 1521, 1543
HpySE526I	ACGT	1 cut(s)	1108
Hsp92I	GRCGYC	2 cut(s)	249, 1016
HspAI	GCGC	3 cut(s)	249, 1524, 1632
KasI	GGCGCC	1 cut(s)	248
Kpn2I	TCCGGA	1 cut(s)	918
Ksp22I	TGATCA	3 cut(s)	127, 817, 1360
LguI	GCTCTTC	1 cut(s)	1157
Lsp1109I	GCAGC	4 cut(s)	324, 508, 536, 1063
LweI	GCATC	3 cut(s)	441, 610, 1558
MaeI	CTAG	2 cut(s)	6, 1782
MaeII	ACGT	1 cut(s)	1108
MaeIII	GTNAC	4 cut(s)	491, 1351, 1561, 1636
MflI	RGATCY	3 cut(s)	114, 147, 1124
MhlI	GDGCHC	4 cut(s)	582, 1382, 1769, 1879
MlsI	TGGCCA	1 cut(s)	1500
MluCI	AATT	5 cut(s)	737, 746, 1240, 1549, 1849
MluNI	TGGCCA	1 cut(s)	1500
Mly113I	GGCGCC	1 cut(s)	249
MlyI	GAGTC	5 cut(s)	344, 451, 1096, 1439, 1499
MmeI	TCCRAC	3 cut(s)	104, 282, 1453
Mox20I	TGGCCA	1 cut(s)	1500
Mph1103I	ATGCAT	1 cut(s)	1573
MroI	TCCGGA	1 cut(s)	918
MroXI	GAANNNNTTC	2 cut(s)	101, 1161
MscI	TGGCCA	1 cut(s)	1500
MseI	TTAA	2 cut(s)	584, 1251
MslI	CAYNNNNRTG	4 cut(s)	167, 173, 813, 1385
Msp20I	TGGCCA	1 cut(s)	1500
MspI	CCGG	6 cut(s)	294, 919, 986, 996, 1048, 1808
MspR9I	CCNGG	6 cut(s)	356, 986, 996, 1232, 1418, 1482
Mva1269I	GAATGC	2 cut(s)	1571, 1745
MvaI	CCWGG	4 cut(s)	356, 1232, 1418, 1482
MwoI	GCNNNNNNNGC	7 cut(s)	541, 778, 899, 998, 1377, 1521, 1543
NarI	GGCGCC	1 cut(s)	249
NciI	CCSGG	2 cut(s)	986, 996
NcoI	CCATGG	2 cut(s)	1094, 1278
NdeI	CATATG	1 cut(s)	447
NlaIV	GGNNCC	7 cut(s)	196, 250, 353, 377, 868, 993, 1103
NmeAIII	GCCGAG	2 cut(s)	1000, 1031
NmuCI	GTSAC	2 cut(s)	491, 1351
NsiI	ATGCAT	1 cut(s)	1573
NspI	RCATGY	2 cut(s)	301, 1336
NspV	TTCGAA	5 cut(s)	242, 707, 846, 896, 1155
OliI	CACNNNNGTG	1 cut(s)	813
PagI	TCATGA	1 cut(s)	508
PciI	ACATGT	1 cut(s)	1332
PciSI	GCTCTTC	1 cut(s)	1157
PctI	GAATGC	2 cut(s)	1571, 1745
PdmI	GAANNNNTTC	2 cut(s)	101, 1161
PfeI	GAWTC	6 cut(s)	76, 325, 389, 514, 949, 1030
PflMI	CCANNNNNTGG	2 cut(s)	663, 1894
PfoI	TCCNGGA	1 cut(s)	994
PkrI	GCNGC	6 cut(s)	314, 523, 526, 871, 1053, 1101
PleI	GAGTC	5 cut(s)	343, 450, 1095, 1439, 1499
PluTI	GGCGCC	1 cut(s)	252
PpsI	GAGTC	5 cut(s)	343, 450, 1095, 1439, 1499
PpuMI	RGGWCCY	1 cut(s)	230
PscI	ACATGT	1 cut(s)	1332
PshBI	ATTAAT	1 cut(s)	1251
Psp124BI	GAGCTC	2 cut(s)	582, 1769
Psp5II	RGGWCCY	1 cut(s)	230
Psp6I	CCWGG	4 cut(s)	354, 1230, 1416, 1480
PspEI	GGTNACC	1 cut(s)	491
PspFI	CCCAGC	2 cut(s)	139, 568
PspGI	CCWGG	4 cut(s)	354, 1230, 1416, 1480
PspN4I	GGNNCC	7 cut(s)	196, 250, 353, 377, 868, 993, 1103
PspPI	GGNCC	4 cut(s)	230, 566, 1101, 1420
PspPPI	RGGWCCY	1 cut(s)	230
PstI	CTGCAG	1 cut(s)	526
PstNI	CAGNNNCTG	2 cut(s)	530, 863
PsuI	RGATCY	3 cut(s)	114, 147, 1124
RseI	CAYNNNNRTG	4 cut(s)	167, 173, 813, 1385
SacI	GAGCTC	2 cut(s)	582, 1769
SapI	GCTCTTC	1 cut(s)	1157
SaqAI	TTAA	2 cut(s)	584, 1251
SatI	GCNGC	6 cut(s)	313, 522, 525, 870, 1052, 1100
Sau96I	GGNCC	4 cut(s)	230, 566, 1101, 1420
ScaI	AGTACT	4 cut(s)	560, 694, 1495, 1817
SchI	GAGTC	5 cut(s)	344, 451, 1096, 1439, 1499
ScrFI	CCNGG	6 cut(s)	356, 986, 996, 1232, 1418, 1482
SduI	GDGCHC	4 cut(s)	582, 1382, 1769, 1879
SfaNI	GCATC	3 cut(s)	441, 610, 1558
SfcI	CTRYAG	2 cut(s)	522, 595
SfoI	GGCGCC	1 cut(s)	250
SfuI	TTCGAA	5 cut(s)	242, 707, 846, 896, 1155
SinI	GGWCC	2 cut(s)	230, 1420
SmiMI	CAYNNNNRTG	4 cut(s)	167, 173, 813, 1385
SmlI	CTYRAG	1 cut(s)	1222
SmoI	CTYRAG	1 cut(s)	1222
Sse9I	AATT	5 cut(s)	737, 746, 1240, 1549, 1849
SsiI	CCGC	5 cut(s)	870, 1099, 1207, 1515, 1558
SspDI	GGCGCC	1 cut(s)	248
SspMI	CTAG	2 cut(s)	6, 1782
SstI	GAGCTC	2 cut(s)	582, 1769
StyD4I	CCNGG	6 cut(s)	354, 984, 994, 1230, 1416, 1480
StyI	CCWWGG	3 cut(s)	118, 1094, 1278
TaaI	ACNGT	4 cut(s)	663, 815, 853, 877
TaiI	ACGT	1 cut(s)	1111
TaqI	TCGA	9 cut(s)	242, 707, 735, 846, 896, 1035, 1155, 1583, 1794
TasI	AATT	5 cut(s)	737, 746, 1240, 1549, 1849
TatI	WGTACW	8 cut(s)	282, 558, 692, 726, 879, 1293, 1493, 1815
TauI	GCSGC	2 cut(s)	872, 1102
TfiI	GAWTC	6 cut(s)	76, 325, 389, 514, 949, 1030
Tru1I	TTAA	2 cut(s)	584, 1251
Tru9I	TTAA	2 cut(s)	584, 1251
TscAI	CASTG	3 cut(s)	25, 169, 668
TseFI	GTSAC	2 cut(s)	491, 1351
TseI	GCWGC	4 cut(s)	312, 521, 524, 1051
Tsp45I	GTSAC	2 cut(s)	491, 1351
TspDTI	ATGAA	9 cut(s)	57, 225, 384, 497, 839, 1088, 1237, 1332, 1665
TspGWI	ACGGA	1 cut(s)	1117
TspRI	CASTG	3 cut(s)	25, 169, 668
Van91I	CCANNNNNTGG	2 cut(s)	663, 1894
VpaK11BI	GGWCC	2 cut(s)	230, 1420
VspI	ATTAAT	1 cut(s)	1251
XapI	RAATTY	1 cut(s)	737
XceI	RCATGY	2 cut(s)	301, 1336
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1670, 1895
XmnI	GAANNNNTTC	2 cut(s)	101, 1161
XspI	CTAG	2 cut(s)	6, 1782
ZrmI	AGTACT	4 cut(s)	560, 694, 1495, 1817
Zsp2I	ATGCAT	1 cut(s)	1573

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.