Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0007311

Physical Location & Seq

Genomic Coordinates Reverse (-)

14203915 .. 14208850

Gene Structure 4936 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG169300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1428 bp

ATGGCTAGAGAGCTGTGCAGTGAAGATCATAAGTCCTCATCAGTTGGTTTTTGCTACTCGGATGTTTCATCAGCCAATCCAACCATCCACCATCAGAACCAGTTTACAAATCAGATCCAAGGCTTTGATCAGTCAAACCCAGCAGAGATCTTCAACTTGACCACTGGCATGGAGATGATAGGCTTCTCCAAAGGAGCCTTCTTCTCCAAACATGGAGGAGGAGGAGGAGGACCTTCATCTTCGAAAGGCGCCGATCATTTCTACCATCCTCATCAGCAAGAGTACAACACAACTGGCATGTCGGAAACGAGCAGCGAAAACCAGAATCTAATGGAGTCTGGTGGAGCTTGGCACCAGGAGAACAGCAACAATAGGTTCCTTGTTGATGATTCTTCATTGAGGTGTGTTTTCCCATGTGAAGGTAATGAGAGGCCAAGCCAAGGCCTCTCACTCTCTCTTAGCTCATCCAACCCCTCTAGTATTGGCTTACAGTCCTTTGAACTCAGGCAGACAAATCATCATCAAGATATTGGGGGCATCAATCAGAGTCATATGATATTGCAAGATGGGTATTTGGGTAAAAGCTCAGGTCTTGGTCACCAATCTCTTCTTCATGAGAATCAAGCTGCAGCTTCTGGGCTTTTCCAGCTCAGAAACTCAAAGTACTTAGGCCCTGCTCAGGAGCTCTTAAATGAGTTCTGTAGCCTCGGAACAAAGCAGACTGATGCTCTTGGAGTTTCAAAGCACAAGTCAAACAAAACCAAACAGTGGGAAGATCAGGATAACAATAATGGCAGTACTTCTTCGTCTTCGAAAAAGCAGTCTTCCCTGTACTCCCTCGAATTCGTTGAATTGCAGAAGAGAAAAACCAGACTGCTTCAAATGCTGGAAGAGGTGGAGAGGAGATACAAGCACTACTGTGATCAGATGAAGGCTGTGGTCTCATCCTTCGAAACCGTGGCAGGGACTGGAGCCGCCACGGTGTACTCGAAGCTGGCTTCGAAAGCCATGTCAAGACATTTCCGGAGCTTGAAAGACGGGATTGTAGCTCAGATTCAGGCCACAAGGAAAGCAATGGGGGAGAAAGACCCGGTGGCTCCCGGAGCAAGCCGAGGCGAGACTCCTCGGCTTCGGATTCTAGACCAAACTCTCCGGCAGCAGAGGGCTTTTCAACAGATGAACATGATGGAGAGTCATCCATGGCGGCCCCAACGTGGCCTTCCTGAGAGATCCGTCTCGGTTCTTCGGGCTTGGCTCTTCGAACACTTTCTTCACCCGTACCCAAGCGATGTTGATAAACATATCTTAGCCCGCCAAACGGGTCTCTCAAGAAGCCAGGCACGTCCACATCTCTCTCTCTCTAGAATATTAGTATCTACAAAATTACAAATTAAAATTTTGATCCCACCATTTAGTTTATATTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006355 GO:0008150 GO:0009506 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030054 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055044 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

475

Amino Acids

52.94

Weight (kDa)

8.97

Isoelectric Point (pI)

54.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	217 - 348	4e-46	Associated with HOX
Homeobox_KN	PF05920	418 - 446	8.5e-09	Homeobox KN domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41410
fragaria_vesca	FvH4_5g02960 FvH4_5g02960 FvH4_5g02960 FvH4_5g02960
malus_domestica	MD06G1088700.v1.1 MD14G1109800.v1.1
prunus_persica	Prupe.5G104600_v2.0.a1 Prupe.5G104600_v2.0.a1
pyrus_communis	pycom06g08460 pycom14g10390
rosa_chinensis	RchiOBHm_Chr7g0196921
rosa_laevigata	RLG00000003980
rosa_multiflora	Rmu_sc0001083.1_g000011
rosa_roxburghii	Rroxscaffold_3G00258870
rosa_rugosa	Rorug07G0036500 Rorug07G0036600 Rorug07G0036700 Rorug07G0036700 Rorug07G0036800
rosa_samantha	Rh7AG161000 Rh7BG163200 Rh7CG169300 Rh7DG162600
rosa_wichuraiana	Rw7G014090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	248, 351
AccB7I	CCANNNNNTGG	1 cut(s)	768
AccIII	TCCGGA	1 cut(s)	1023
AciI	CCGC	3 cut(s)	975, 1204, 1312
AclWI	GGATC	3 cut(s)	109, 1224, 1396
AcsI	RAATTY	2 cut(s)	842, 1395
AcyI	GRCGYC	1 cut(s)	249
AfaI	GTAC	6 cut(s)	284, 665, 799, 833, 986, 1280
AfiI	CCNNNNNNNGG	7 cut(s)	419, 440, 679, 768, 963, 1214, 1318
AgsI	TTSAA	7 cut(s)	154, 500, 741, 851, 881, 1033, 1172
AjiI	CACGTC	1 cut(s)	1343
AjnI	CCWGG	2 cut(s)	354, 1335
AjuI	GAANNNNNNNTTGG	6 cut(s)	182, 214, 594, 626, 1203, 1235
AleI	CACNNNNGTG	1 cut(s)	918
Alw21I	GWGCWC	1 cut(s)	687
Alw26I	GTCTC	4 cut(s)	946, 1112, 1240, 1328
AlwI	GGATC	3 cut(s)	109, 1224, 1396
AlwNI	CAGNNNCTG	2 cut(s)	635, 968
Aor13HI	TCCGGA	1 cut(s)	1023
AoxI	GGCC	6 cut(s)	431, 442, 670, 1059, 1205, 1216
ApeKI	GCWGC	4 cut(s)	312, 626, 629, 1156
ApoI	RAATTY	2 cut(s)	842, 1395
ArsI	GACNNNNNNTTYG	6 cut(s)	734, 766, 806, 838, 995, 1027
Asp700I	GAANNNNTTC	1 cut(s)	1266
AspLEI	GCGC	1 cut(s)	251
AspS9I	GGNCC	3 cut(s)	230, 671, 1206
AsuC2I	CCSGG	2 cut(s)	1091, 1101
AsuHPI	GGTGA	2 cut(s)	590, 1265
AsuII	TTCGAA	5 cut(s)	242, 812, 951, 1001, 1260
AvaII	GGWCC	1 cut(s)	230
BanI	GGYRCC	2 cut(s)	248, 351
BanII	GRGCYC	1 cut(s)	687
BbsI	GAAGAC	2 cut(s)	801, 816
Bbv12I	GWGCWC	1 cut(s)	687
BbvI	GCAGC	4 cut(s)	324, 613, 641, 1168
BccI	CCATC	5 cut(s)	92, 99, 273, 560, 1180
BciT130I	CCWGG	2 cut(s)	356, 1337
BclI	TGATCA	2 cut(s)	127, 922
BcnI	CCSGG	2 cut(s)	1091, 1101
BcoDI	GTCTC	4 cut(s)	946, 1112, 1240, 1328
BfaI	CTAG	4 cut(s)	6, 477, 1139, 1362
BfmI	CTRYAG	2 cut(s)	627, 700
BfoI	RGCGCY	1 cut(s)	252
BglII	AGATCT	1 cut(s)	147
BisI	GCNGC	6 cut(s)	313, 627, 630, 975, 1157, 1205
BlsI	GCNGC	6 cut(s)	314, 628, 631, 976, 1158, 1206
BmcAI	AGTACT	2 cut(s)	665, 799
Bme1390I	CCNGG	4 cut(s)	356, 1091, 1101, 1337
Bme18I	GGWCC	1 cut(s)	230
BmgBI	CACGTC	1 cut(s)	1343
BmgT120I	GGNCC	3 cut(s)	230, 671, 1206
BmiI	GGNNCC	7 cut(s)	196, 250, 353, 377, 973, 1098, 1208
BmrFI	CCNGG	4 cut(s)	356, 1091, 1101, 1337
BmsI	GCATC	2 cut(s)	546, 715
BpiI	GAAGAC	2 cut(s)	801, 816
BpmI	CTGGAG	1 cut(s)	990
Bpu10I	CCTNAGC	2 cut(s)	586, 678
Bpu14I	TTCGAA	5 cut(s)	242, 812, 951, 1001, 1260
BpuEI	CTTGAG	1 cut(s)	1312
BpuMI	CCSGG	2 cut(s)	1091, 1101
BsaHI	GRCGYC	1 cut(s)	249
BsaI	GGTCTC	2 cut(s)	946, 1328
BsaJI	CCNNGG	8 cut(s)	118, 439, 706, 957, 978, 1111, 1124, 1199
BsaWI	WCCGGW	1 cut(s)	1023
Bsc4I	CCNNNNNNNGG	7 cut(s)	419, 440, 679, 768, 963, 1214, 1318
Bse1I	ACTGG	4 cut(s)	100, 169, 298, 973
Bse3DI	GCAATG	1 cut(s)	1080
BseAI	TCCGGA	1 cut(s)	1023
BseBI	CCWGG	2 cut(s)	356, 1337
BseDI	CCNNGG	8 cut(s)	118, 439, 706, 957, 978, 1111, 1124, 1199
BseGI	GGATG	6 cut(s)	67, 84, 265, 464, 944, 1195
BseLI	CCNNNNNNNGG	7 cut(s)	419, 440, 679, 768, 963, 1214, 1318
BseMI	GCAATG	1 cut(s)	1080
BseMII	CTCAG	6 cut(s)	517, 600, 664, 692, 1064, 1215
BseNI	ACTGG	4 cut(s)	100, 169, 298, 973
BseRI	GAGGAG	6 cut(s)	231, 234, 237, 240, 916, 1113
BseXI	GCAGC	4 cut(s)	324, 613, 641, 1168
BseYI	CCCAGC	1 cut(s)	139
BsgI	GTGCAG	1 cut(s)	37
BshFI	GGCC	6 cut(s)	433, 444, 672, 1061, 1207, 1218
BshNI	GGYRCC	2 cut(s)	248, 351
BsiHKAI	GWGCWC	1 cut(s)	687
BsiSI	CCGG	4 cut(s)	1024, 1091, 1101, 1153
BslFI	GGGAC	1 cut(s)	979
BslI	CCNNNNNNNGG	7 cut(s)	419, 440, 679, 768, 963, 1214, 1318
BsmAI	GTCTC	4 cut(s)	946, 1112, 1240, 1328
BsmBI	CGTCTC	1 cut(s)	1240
BsmFI	GGGAC	1 cut(s)	979
BsnI	GGCC	6 cut(s)	433, 444, 672, 1061, 1207, 1218
Bso31I	GGTCTC	2 cut(s)	946, 1328
Bsp119I	TTCGAA	5 cut(s)	242, 812, 951, 1001, 1260
Bsp1286I	GDGCHC	1 cut(s)	687
Bsp13I	TCCGGA	1 cut(s)	1023
Bsp143I	GATC	9 cut(s)	25, 114, 127, 147, 253, 775, 922, 1229, 1401
Bsp19I	CCATGG	1 cut(s)	1199
BspACI	CCGC	3 cut(s)	975, 1204, 1312
BspANI	GGCC	6 cut(s)	433, 444, 672, 1061, 1207, 1218
BspCNI	CTCAG	6 cut(s)	516, 599, 663, 691, 1063, 1216
BspEI	TCCGGA	1 cut(s)	1023
BspHI	TCATGA	1 cut(s)	613
BspLI	GGNNCC	7 cut(s)	196, 250, 353, 377, 973, 1098, 1208
BspMAI	CTGCAG	1 cut(s)	631
BspPI	GGATC	3 cut(s)	109, 1224, 1396
BspQI	GCTCTTC	1 cut(s)	1262
BspT104I	TTCGAA	5 cut(s)	242, 812, 951, 1001, 1260
BspT107I	GGYRCC	2 cut(s)	248, 351
BspTNI	GGTCTC	2 cut(s)	946, 1328
BsrDI	GCAATG	1 cut(s)	1080
BsrI	ACTGG	4 cut(s)	100, 169, 298, 973
BssECI	CCNNGG	8 cut(s)	118, 439, 706, 957, 978, 1111, 1124, 1199
BssMI	GATC	9 cut(s)	25, 114, 127, 147, 253, 775, 922, 1229, 1401
BssNI	GRCGYC	1 cut(s)	249
BssT1I	CCWWGG	3 cut(s)	118, 439, 1199
Bst2UI	CCWGG	2 cut(s)	356, 1337
Bst4CI	ACNGT	5 cut(s)	492, 768, 920, 958, 982
Bst6I	CTCTTC	4 cut(s)	612, 854, 885, 1262
BstACI	GRCGYC	1 cut(s)	249
BstBI	TTCGAA	5 cut(s)	242, 812, 951, 1001, 1260
BstC8I	GCNNGC	3 cut(s)	996, 1108, 1312
BstDEI	CTNAG	9 cut(s)	458, 503, 586, 650, 667, 678, 1050, 1224, 1306
BstDSI	CCRYGG	3 cut(s)	957, 978, 1199
BstEII	GGTNACC	1 cut(s)	596
BstF5I	GGATG	6 cut(s)	67, 84, 265, 464, 944, 1195
BstH2I	RGCGCY	1 cut(s)	252
BstHHI	GCGC	1 cut(s)	251
BstKTI	GATC	9 cut(s)	28, 117, 130, 150, 256, 778, 925, 1232, 1404
BstMAI	GTCTC	4 cut(s)	946, 1112, 1240, 1328
BstMBI	GATC	9 cut(s)	25, 114, 127, 147, 253, 775, 922, 1229, 1401
BstMWI	GCNNNNNNNGC	4 cut(s)	646, 883, 1004, 1103
BstNI	CCWGG	2 cut(s)	356, 1337
BstNSI	RCATGY	1 cut(s)	301
BstPI	GGTNACC	1 cut(s)	596
BstSCI	CCNGG	4 cut(s)	354, 1089, 1099, 1335
BstSFI	CTRYAG	2 cut(s)	627, 700
BstV1I	GCAGC	4 cut(s)	324, 613, 641, 1168
BstV2I	GAAGAC	2 cut(s)	801, 816
BstX2I	RGATCY	3 cut(s)	114, 147, 1229
BstXI	CCANNNNNNTGG	1 cut(s)	169
BstYI	RGATCY	3 cut(s)	114, 147, 1229
BsuRI	GGCC	6 cut(s)	433, 444, 672, 1061, 1207, 1218
BtgI	CCRYGG	3 cut(s)	957, 978, 1199
BtgZI	GCGATG	1 cut(s)	1302
BtrI	CACGTC	1 cut(s)	1343
BtsCI	GGATG	6 cut(s)	67, 84, 265, 464, 944, 1195
BtsI	GCAGTG	1 cut(s)	25
BtsIMutI	CAGTG	3 cut(s)	25, 162, 773
Cac8I	GCNNGC	3 cut(s)	996, 1108, 1312
CaiI	CAGNNNCTG	2 cut(s)	635, 968
CciI	TCATGA	1 cut(s)	613
CfoI	GCGC	1 cut(s)	251
Cfr13I	GGNCC	3 cut(s)	230, 671, 1206
Csp6I	GTAC	6 cut(s)	283, 664, 798, 832, 985, 1279
CviAII	CATG	8 cut(s)	169, 212, 298, 414, 614, 1009, 1183, 1200
CviQI	GTAC	6 cut(s)	283, 664, 798, 832, 985, 1279
DdeI	CTNAG	9 cut(s)	458, 503, 586, 650, 667, 678, 1050, 1224, 1306
DinI	GGCGCC	1 cut(s)	250
DpnI	GATC	9 cut(s)	27, 116, 129, 149, 255, 777, 924, 1231, 1403
DpnII	GATC	9 cut(s)	25, 114, 127, 147, 253, 775, 922, 1229, 1401
Eam1104I	CTCTTC	4 cut(s)	612, 854, 885, 1262
EarI	CTCTTC	4 cut(s)	612, 854, 885, 1262
Ecl136II	GAGCTC	1 cut(s)	685
Eco130I	CCWWGG	3 cut(s)	118, 439, 1199
Eco147I	AGGCCT	1 cut(s)	444
Eco24I	GRGCYC	1 cut(s)	687
Eco31I	GGTCTC	2 cut(s)	946, 1328
Eco47I	GGWCC	1 cut(s)	230
Eco53kI	GAGCTC	1 cut(s)	685
Eco91I	GGTNACC	1 cut(s)	596
EcoICRI	GAGCTC	1 cut(s)	685
EcoO109I	RGGNCCY	2 cut(s)	230, 671
EcoO65I	GGTNACC	1 cut(s)	596
EcoRI	GAATTC	1 cut(s)	842
EcoRII	CCWGG	2 cut(s)	354, 1335
EcoT14I	CCWWGG	3 cut(s)	118, 439, 1199
EcoT38I	GRGCYC	1 cut(s)	687
EgeI	GGCGCC	1 cut(s)	250
EheI	GGCGCC	1 cut(s)	250
ErhI	CCWWGG	3 cut(s)	118, 439, 1199
Esp3I	CGTCTC	1 cut(s)	1240
FaeI	CATG	8 cut(s)	172, 215, 301, 417, 617, 1012, 1186, 1203
FaqI	GGGAC	1 cut(s)	979
FatI	CATG	8 cut(s)	168, 211, 297, 413, 613, 1008, 1182, 1199
FauI	CCCGC	1 cut(s)	1319
FauNDI	CATATG	1 cut(s)	552
FbaI	TGATCA	2 cut(s)	127, 922
Fnu4HI	GCNGC	6 cut(s)	313, 627, 630, 975, 1157, 1205
FokI	GGATG	6 cut(s)	71, 74, 252, 451, 931, 1182
FriOI	GRGCYC	1 cut(s)	687
Fsp4HI	GCNGC	6 cut(s)	313, 627, 630, 975, 1157, 1205
FspBI	CTAG	4 cut(s)	6, 477, 1139, 1362
GlaI	GCGC	1 cut(s)	250
GluI	GCNGC	6 cut(s)	313, 627, 630, 975, 1157, 1205
GsaI	CCCAGC	1 cut(s)	143
GsuI	CTGGAG	1 cut(s)	990
HaeII	RGCGCY	1 cut(s)	252
HaeIII	GGCC	6 cut(s)	433, 444, 672, 1061, 1207, 1218
HapII	CCGG	4 cut(s)	1024, 1091, 1101, 1153
HhaI	GCGC	1 cut(s)	251
Hin1I	GRCGYC	1 cut(s)	249
Hin1II	CATG	8 cut(s)	172, 215, 301, 417, 617, 1012, 1186, 1203
Hin6I	GCGC	1 cut(s)	249
HinP1I	GCGC	1 cut(s)	249
HinfI	GANTC	9 cut(s)	325, 335, 389, 547, 619, 1054, 1120, 1135, 1192
HpaII	CCGG	4 cut(s)	1024, 1091, 1101, 1153
HphI	GGTGA	2 cut(s)	590, 1265
Hpy166II	GTNNAC	3 cut(s)	105, 985, 1346
Hpy8I	GTNNAC	3 cut(s)	105, 985, 1346
HpyAV	CCTTC	6 cut(s)	208, 243, 413, 925, 958, 1229
HpyCH4III	ACNGT	5 cut(s)	492, 768, 920, 958, 982
HpyCH4IV	ACGT	2 cut(s)	1213, 1342
HpyCH4V	TGCA	4 cut(s)	18, 562, 629, 856
HpyF10VI	GCNNNNNNNGC	4 cut(s)	646, 883, 1004, 1103
HpyF3I	CTNAG	9 cut(s)	458, 503, 586, 650, 667, 678, 1050, 1224, 1306
HpySE526I	ACGT	2 cut(s)	1213, 1342
Hsp92I	GRCGYC	1 cut(s)	249
Hsp92II	CATG	8 cut(s)	172, 215, 301, 417, 617, 1012, 1186, 1203
HspAI	GCGC	1 cut(s)	249
KasI	GGCGCC	1 cut(s)	248
Kpn2I	TCCGGA	1 cut(s)	1023
Ksp22I	TGATCA	2 cut(s)	127, 922
Kzo9I	GATC	9 cut(s)	25, 114, 127, 147, 253, 775, 922, 1229, 1401
LguI	GCTCTTC	1 cut(s)	1262
LmnI	GCTCC	7 cut(s)	194, 344, 682, 971, 1026, 1102, 1103
Lsp1109I	GCAGC	4 cut(s)	324, 613, 641, 1168
LweI	GCATC	2 cut(s)	546, 715
MaeI	CTAG	4 cut(s)	6, 477, 1139, 1362
MaeII	ACGT	2 cut(s)	1213, 1342
MaeIII	GTNAC	1 cut(s)	596
MalI	GATC	9 cut(s)	27, 116, 129, 149, 255, 777, 924, 1231, 1403
MboI	GATC	9 cut(s)	25, 114, 127, 147, 253, 775, 922, 1229, 1401
MflI	RGATCY	3 cut(s)	114, 147, 1229
MhlI	GDGCHC	1 cut(s)	687
MluCI	AATT	5 cut(s)	842, 851, 1382, 1389, 1395
Mly113I	GGCGCC	1 cut(s)	249
MlyI	GAGTC	4 cut(s)	344, 556, 1114, 1201
MmeI	TCCRAC	3 cut(s)	104, 282, 492
MroI	TCCGGA	1 cut(s)	1023
MroXI	GAANNNNTTC	1 cut(s)	1266
MseI	TTAA	3 cut(s)	689, 1392, 1426
MslI	CAYNNNNRTG	4 cut(s)	167, 173, 400, 918
MspI	CCGG	4 cut(s)	1024, 1091, 1101, 1153
MspR9I	CCNGG	4 cut(s)	356, 1091, 1101, 1337
MvaI	CCWGG	2 cut(s)	356, 1337
MwoI	GCNNNNNNNGC	4 cut(s)	646, 883, 1004, 1103
NarI	GGCGCC	1 cut(s)	249
NciI	CCSGG	2 cut(s)	1091, 1101
NcoI	CCATGG	1 cut(s)	1199
NdeI	CATATG	1 cut(s)	552
NdeII	GATC	9 cut(s)	25, 114, 127, 147, 253, 775, 922, 1229, 1401
NlaIII	CATG	8 cut(s)	172, 215, 301, 417, 617, 1012, 1186, 1203
NlaIV	GGNNCC	7 cut(s)	196, 250, 353, 377, 973, 1098, 1208
NmeAIII	GCCGAG	2 cut(s)	1105, 1136
NmuCI	GTSAC	1 cut(s)	596
NspI	RCATGY	1 cut(s)	301
NspV	TTCGAA	5 cut(s)	242, 812, 951, 1001, 1260
OliI	CACNNNNGTG	1 cut(s)	918
PagI	TCATGA	1 cut(s)	613
PceI	AGGCCT	1 cut(s)	444
PciSI	GCTCTTC	1 cut(s)	1262
PcsI	WCGNNNNNNNCGW	1 cut(s)	986
PdmI	GAANNNNTTC	1 cut(s)	1266
PfeI	GAWTC	5 cut(s)	325, 389, 619, 1054, 1135
PflMI	CCANNNNNTGG	1 cut(s)	768
PfoI	TCCNGGA	1 cut(s)	1099
PkrI	GCNGC	6 cut(s)	314, 628, 631, 976, 1158, 1206
PleI	GAGTC	4 cut(s)	343, 555, 1114, 1200
PluTI	GGCGCC	1 cut(s)	252
PpsI	GAGTC	4 cut(s)	343, 555, 1114, 1200
PpuMI	RGGWCCY	1 cut(s)	230
Psp124BI	GAGCTC	1 cut(s)	687
Psp5II	RGGWCCY	1 cut(s)	230
Psp6I	CCWGG	2 cut(s)	354, 1335
PspEI	GGTNACC	1 cut(s)	596
PspFI	CCCAGC	1 cut(s)	139
PspGI	CCWGG	2 cut(s)	354, 1335
PspN4I	GGNNCC	7 cut(s)	196, 250, 353, 377, 973, 1098, 1208
PspPI	GGNCC	3 cut(s)	230, 671, 1206
PspPPI	RGGWCCY	1 cut(s)	230
PstI	CTGCAG	1 cut(s)	631
PstNI	CAGNNNCTG	2 cut(s)	635, 968
PsuI	RGATCY	3 cut(s)	114, 147, 1229
RsaI	GTAC	6 cut(s)	284, 665, 799, 833, 986, 1280
RsaNI	GTAC	6 cut(s)	283, 664, 798, 832, 985, 1279
RseI	CAYNNNNRTG	4 cut(s)	167, 173, 400, 918
SacI	GAGCTC	1 cut(s)	687
SapI	GCTCTTC	1 cut(s)	1262
SaqAI	TTAA	3 cut(s)	689, 1392, 1426
SatI	GCNGC	6 cut(s)	313, 627, 630, 975, 1157, 1205
Sau3AI	GATC	9 cut(s)	25, 114, 127, 147, 253, 775, 922, 1229, 1401
Sau96I	GGNCC	3 cut(s)	230, 671, 1206
ScaI	AGTACT	2 cut(s)	665, 799
SchI	GAGTC	4 cut(s)	344, 556, 1114, 1201
ScrFI	CCNGG	4 cut(s)	356, 1091, 1101, 1337
SduI	GDGCHC	1 cut(s)	687
SfaNI	GCATC	2 cut(s)	546, 715
SfcI	CTRYAG	2 cut(s)	627, 700
SfoI	GGCGCC	1 cut(s)	250
SfuI	TTCGAA	5 cut(s)	242, 812, 951, 1001, 1260
SinI	GGWCC	1 cut(s)	230
SmiMI	CAYNNNNRTG	4 cut(s)	167, 173, 400, 918
SmlI	CTYRAG	1 cut(s)	1327
SmoI	CTYRAG	1 cut(s)	1327
Sse9I	AATT	5 cut(s)	842, 851, 1382, 1389, 1395
SseBI	AGGCCT	1 cut(s)	444
SsiI	CCGC	3 cut(s)	975, 1204, 1312
SspDI	GGCGCC	1 cut(s)	248
SspI	AATATT	1 cut(s)	1368
SspMI	CTAG	4 cut(s)	6, 477, 1139, 1362
SstI	GAGCTC	1 cut(s)	687
StuI	AGGCCT	1 cut(s)	444
StyD4I	CCNGG	4 cut(s)	354, 1089, 1099, 1335
StyI	CCWWGG	3 cut(s)	118, 439, 1199
TaaI	ACNGT	5 cut(s)	492, 768, 920, 958, 982
TaiI	ACGT	2 cut(s)	1216, 1345
TaqI	TCGA	7 cut(s)	242, 812, 840, 951, 989, 1001, 1260
TasI	AATT	5 cut(s)	842, 851, 1382, 1389, 1395
TatI	WGTACW	5 cut(s)	282, 663, 797, 831, 984
TauI	GCSGC	2 cut(s)	977, 1207
TfiI	GAWTC	5 cut(s)	325, 389, 619, 1054, 1135
Tru1I	TTAA	3 cut(s)	689, 1392, 1426
Tru9I	TTAA	3 cut(s)	689, 1392, 1426
TscAI	CASTG	3 cut(s)	25, 169, 773
TseFI	GTSAC	1 cut(s)	596
TseI	GCWGC	4 cut(s)	312, 626, 629, 1156
Tsp45I	GTSAC	1 cut(s)	596
TspDTI	ATGAA	6 cut(s)	57, 225, 384, 602, 944, 1193
TspGWI	ACGGA	1 cut(s)	1222
TspRI	CASTG	3 cut(s)	25, 169, 773
Van91I	CCANNNNNTGG	1 cut(s)	768
VpaK11BI	GGWCC	1 cut(s)	230
XapI	RAATTY	2 cut(s)	842, 1395
XbaI	TCTAGA	2 cut(s)	1138, 1361
XceI	RCATGY	1 cut(s)	301
XmnI	GAANNNNTTC	1 cut(s)	1266
XspI	CTAG	4 cut(s)	6, 477, 1139, 1362
ZrmI	AGTACT	2 cut(s)	665, 799

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.