Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0007311

Physical Location & Seq

Genomic Coordinates Forward (+)

17341656 .. 17345674

Gene Structure 4019 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1109800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGGCAGGAGAACTGCTGAGTAGTGAAGCTAACAAGTCAAGGAACAACATGGCTTCTTCCTCAGTTGGTGGATTCTGCTACTCTTATGATGTCTCATCCAGCAATCCTACAACCACCCACTTCACCACCAATCAGATCCAAGACTTTGGGTCAAACCCTGCTGAGATCTTCAACCTCACCACTGGCATGGAGATGATAGGGTTCCCCAAGCAGCAAAATGACACTTCTAACCCTTCAGCTTCATCCATCTGGAATAAAGCTCGCTTCTTTGGTAAACAACAACAACAGCAACCTGATTTCACAACTGGGGTTTCAGAAACCAGCACTGATCATCATCATCAGAACAATCTATTGGTGGGAGGACCTCCACATCATCATCATCAACAATCCAATGGTTGGCAAGAGAATAATAATAATAATAACAGGTTTCCGGTGGATGATTCTTCTTTGAGGTGTGTTTTTCCATGCGAAGGAAATGAGAGGCCAAGTCAAGGCCTTTCACTCTCTCTCAGCTCAAACAATCCTTCCTCTATTGGGTTGCAGTCCTTTGAACTCAAACAGACCAGTCATCATCAGCCACCTCAGCATCAAGACCATCAGGATGATGGTGAGGACGATCACATGAGGTTTATGCAAGATGGGTTTTTGGGAAAAGCTGCTTATCATGCTTCTGCTTCTGGGGCAAGCAGTCTTCAACATGAAGGACTGTTCCAGCTGAGGAACTCAAAGTACTTGGGCCCTGCCCAGCAGCTTCTCAATGAGTTCTGCAGCCTTGGAACAACAAAGCCAACGACTGCTGATACACAAAAGCAAAAGCCCCATAAAAACAAACAGTGGGGTGAACAAGAGGACAATGGTAGTACTAGCTCTTCAAGAAACAAGCAACAATCCAACATTTGCTCCCTTGAATTTGTGGAGTTGCAGAAGCGAAAAACCAGACTGCTTTCAATGCTTGAAGAGGTGGAGAGGAGGTACAAGCACTACTGCGATCAAATGAAGGCGGTGGTGGCGTCGTTTGAGGCTGTGGCAGGAGCTGGGGCTGCCACCGTGTACTCCGCCTTAGCGGCGAAGGCCATGTCGAGGCATTTCAGGAGCTTGAAAGATGGGATTGTGAGTCAAATTCAGGCCACAAGAAAGGCCATGGGAGAGAAGGACCCGGTGGCGCCTGGCACGACGAGAGGGGAGACTCCGAGGCTTCGGATTCTCGATCAAACACTTCGACAGCAGAGAGCATTTCAGCAGATGAACATGATGGAAAGCCATCCATGGAGACCCCAACGTGGCCTCCCTGAGAGATCAGTCTCCGTTCTACGAGCTTGGCTCTTTGAACACTTTCTTCATCCGTACCCGAGCGATGTCGATAAACATATCTTAGCCCGCCAAACGGGTCTCTCAAGAAGCCAGGTCTCCAATTGGTTCATTAACGCAAGAGTTAGGCTTTGGAAGCCAATGGTCGAAGAAATGTACATGGAAGAAACAAAGGAACGTGAAAACAACATGAACATTAGCAACATGACCTCCTCAGATGGTATTGCAACCGATCCCAGCCCGCATCAGTCCCGGCCCGAAGATGAAAAGCCAACTCACGATCAACTCGTCCGAATGGACTCCGAGTGCCTCTCCTCCATCATCACCTACCCGGAGAAGAATCATGACTCTAGAGGCAGCAAGAATACCATCTCAAGTCACAACATGCACCCGCATCAAAATTTTGGGAGGGTAAATGAGTCATTCGGGACAATGGAGCTGGATTTTTCGTCGTATAATCATCATCAACAACACTCTGGAGGGACGGTTTCTTATGCTAATGATCATCATCACCCCTCAAATCAGGGTTTCAATGCCGGTGGCGGTGTGTCGTTGACATTAGGGTTGCAGCAGCACGGCGGAAATGGGGTGAGCTTAGCATTCTCTCCTGCCTCACAGAACTCTCTATTTTACCCTAGAGATCACATTGAAGAATGCCAACCGGTTCAGTACTCGCTATTAGATGGGGAAGGTGAGAATAATTTGCCTTACAGAAATTTGATGGGGGCACAGCTGCTACATGACTTGGCAGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006355 GO:0008150 GO:0009506 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030054 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055044 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

688

Amino Acids

76.91

Weight (kDa)

6.38

Isoelectric Point (pI)

54.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	239 - 370	3.4e-46	Associated with HOX
Homeobox_KN	PF05920	440 - 479	8.7e-19	Homeobox KN domain
Homeodomain	PF00046	447 - 479	4.5e-06	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41410
fragaria_vesca	FvH4_5g02960 FvH4_5g02960 FvH4_5g02960 FvH4_5g02960
malus_domestica	MD06G1088700.v1.1 MD14G1109800.v1.1
prunus_persica	Prupe.5G104600_v2.0.a1 Prupe.5G104600_v2.0.a1
pyrus_communis	pycom06g08460 pycom14g10390
rosa_chinensis	RchiOBHm_Chr7g0196921
rosa_laevigata	RLG00000003980
rosa_multiflora	Rmu_sc0001083.1_g000011
rosa_roxburghii	Rroxscaffold_3G00258870
rosa_rugosa	Rorug07G0036500 Rorug07G0036600 Rorug07G0036700 Rorug07G0036700 Rorug07G0036800
rosa_samantha	Rh7AG161000 Rh7BG163200 Rh7CG169300 Rh7DG162600
rosa_wichuraiana	Rw7G014090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1162
AccB7I	CCANNNNNTGG	1 cut(s)	396
AciI	CCGC	8 cut(s)	1001, 1056, 1064, 1378, 1550, 1700, 1851, 1887
AclWI	GGATC	2 cut(s)	130, 1535
AcsI	RAATTY	4 cut(s)	908, 1119, 1708, 2023
AcuI	CTGAAG	1 cut(s)	219
AcyI	GRCGYC	2 cut(s)	1010, 1163
AfaI	GTAC	7 cut(s)	731, 862, 974, 1052, 1346, 1466, 1979
AfiI	CCNNNNNNNGG	7 cut(s)	396, 470, 491, 534, 1080, 1280, 1384
AgeI	ACCGGT	1 cut(s)	1969
AhdI	GACNNNNNGTC	1 cut(s)	148
AjnI	CCWGG	2 cut(s)	1165, 1401
AjuI	GAANNNNNNNTTGG	2 cut(s)	335, 367
Alw26I	GTCTC	6 cut(s)	97, 1178, 1264, 1306, 1394, 1411
AlwI	GGATC	2 cut(s)	130, 1535
AlwNI	CAGNNNCTG	1 cut(s)	1034
Ama87I	CYCGRG	1 cut(s)	1348
AoxI	GGCC	8 cut(s)	482, 493, 736, 1071, 1125, 1137, 1282, 1562
ApaI	GGGCCC	1 cut(s)	740
ApeKI	GCWGC	9 cut(s)	211, 656, 748, 768, 1040, 1665, 1876, 1879, 2041
ApoI	RAATTY	4 cut(s)	908, 1119, 1708, 2023
ArsI	GACNNNNNNTTYG	2 cut(s)	1061, 1093
AsiGI	ACCGGT	1 cut(s)	1969
Asp700I	GAANNNNTTC	1 cut(s)	1332
AspLEI	GCGC	1 cut(s)	1165
AspS9I	GGNCC	5 cut(s)	362, 736, 737, 1153, 1563
AsuC2I	CCSGG	3 cut(s)	1157, 1561, 1640
AsuHPI	GGTGA	8 cut(s)	115, 169, 620, 851, 1624, 1811, 1909, 2012
AvaI	CYCGRG	1 cut(s)	1348
AvaII	GGWCC	2 cut(s)	362, 1153
BaeGI	GKGCMC	2 cut(s)	740, 2038
BanI	GGYRCC	1 cut(s)	1162
BanII	GRGCYC	1 cut(s)	740
BarI	GAAGNNNNNNTAC	2 cut(s)	853, 885
BbsI	GAAGAC	1 cut(s)	683
BbvCI	CCTCAGC	2 cut(s)	582, 716
BbvI	GCAGC	9 cut(s)	223, 643, 760, 780, 1027, 1677, 1888, 1891, 2028
BceAI	ACGGC	1 cut(s)	1900
BciT130I	CCWGG	2 cut(s)	1167, 1403
BclI	TGATCA	2 cut(s)	328, 1810
BcnI	CCSGG	3 cut(s)	1157, 1561, 1640
BcoDI	GTCTC	6 cut(s)	97, 1178, 1264, 1306, 1394, 1411
BfaI	CTAG	3 cut(s)	864, 1659, 1944
BfmI	CTRYAG	1 cut(s)	766
BfoI	RGCGCY	1 cut(s)	1166
BglI	GCCNNNNNGGC	1 cut(s)	1064
BglII	AGATCT	1 cut(s)	165
BlpI	GCTNAGC	1 cut(s)	1903
BmcAI	AGTACT	3 cut(s)	731, 862, 1979
Bme1390I	CCNGG	5 cut(s)	1157, 1167, 1403, 1561, 1640
Bme18I	GGWCC	2 cut(s)	362, 1153
BmeRI	GACNNNNNGTC	1 cut(s)	148
BmeT110I	CYCGRG	1 cut(s)	1348
BmgT120I	GGNCC	5 cut(s)	362, 736, 737, 1153, 1563
BmiI	GGNNCC	4 cut(s)	203, 738, 1155, 1164
BmrFI	CCNGG	5 cut(s)	1157, 1167, 1403, 1561, 1640
BmrI	ACTGGG	1 cut(s)	315
BmsI	GCATC	3 cut(s)	595, 1561, 1711
BmuI	ACTGGG	1 cut(s)	315
BpiI	GAAGAC	1 cut(s)	683
BplI	GAGNNNNNCTC	4 cut(s)	1305, 1337, 1604, 1636
BpmI	CTGGAG	1 cut(s)	1806
Bpu10I	CCTNAGC	3 cut(s)	582, 716, 1060
Bpu1102I	GCTNAGC	1 cut(s)	1903
BpuEI	CTTGAG	2 cut(s)	1378, 1666
BpuMI	CCSGG	3 cut(s)	1157, 1561, 1640
BsaBI	GATNNNNATC	2 cut(s)	333, 1815
BsaHI	GRCGYC	2 cut(s)	1010, 1163
BsaI	GGTCTC	3 cut(s)	1264, 1394, 1411
BsaJI	CCNNGG	4 cut(s)	772, 1140, 1190, 1265
BsaWI	WCCGGW	2 cut(s)	430, 1969
Bsc4I	CCNNNNNNNGG	7 cut(s)	396, 470, 491, 534, 1080, 1280, 1384
Bse118I	RCCGGY	2 cut(s)	1844, 1969
Bse1I	ACTGG	3 cut(s)	187, 310, 564
Bse8I	GATNNNNATC	2 cut(s)	333, 1815
BseBI	CCWGG	2 cut(s)	1167, 1403
BseDI	CCNNGG	4 cut(s)	772, 1140, 1190, 1265
BseGI	GGATG	6 cut(s)	95, 242, 442, 607, 1261, 1339
BseJI	GATNNNNATC	2 cut(s)	333, 1815
BseLI	CCNNNNNNNGG	7 cut(s)	396, 470, 491, 534, 1080, 1280, 1384
BseMII	CTCAG	8 cut(s)	8, 75, 153, 523, 596, 707, 1281, 1536
BseNI	ACTGG	3 cut(s)	187, 310, 564
BseRI	GAGGAG	3 cut(s)	982, 1510, 1612
BseSI	GKGCMC	2 cut(s)	740, 2038
BseXI	GCAGC	9 cut(s)	223, 643, 760, 780, 1027, 1677, 1888, 1891, 2028
BseYI	CCCAGC	3 cut(s)	744, 1034, 1544
BshFI	GGCC	8 cut(s)	484, 495, 738, 1073, 1127, 1139, 1284, 1564
BshNI	GGYRCC	1 cut(s)	1162
BshTI	ACCGGT	1 cut(s)	1969
BsiHKCI	CYCGRG	1 cut(s)	1348
BsiSI	CCGG	6 cut(s)	431, 1157, 1561, 1640, 1845, 1970
BslFI	GGGAC	3 cut(s)	1543, 1750, 1804
BslI	CCNNNNNNNGG	7 cut(s)	396, 470, 491, 534, 1080, 1280, 1384
BsmAI	GTCTC	6 cut(s)	97, 1178, 1264, 1306, 1394, 1411
BsmFI	GGGAC	3 cut(s)	1543, 1750, 1804
BsmI	GAATGC	2 cut(s)	1907, 1967
BsnI	GGCC	8 cut(s)	484, 495, 738, 1073, 1127, 1139, 1284, 1564
Bso31I	GGTCTC	3 cut(s)	1264, 1394, 1411
BsoBI	CYCGRG	1 cut(s)	1348
Bsp120I	GGGCCC	1 cut(s)	736
Bsp1286I	GDGCHC	2 cut(s)	740, 2038
Bsp1407I	TGTACA	1 cut(s)	1464
Bsp1720I	GCTNAGC	1 cut(s)	1903
Bsp19I	CCATGG	2 cut(s)	1140, 1265
BspACI	CCGC	8 cut(s)	1001, 1056, 1064, 1378, 1550, 1700, 1851, 1887
BspANI	GGCC	8 cut(s)	484, 495, 738, 1073, 1127, 1139, 1284, 1564
BspCNI	CTCAG	8 cut(s)	9, 74, 154, 522, 595, 708, 1282, 1535
BspHI	TCATGA	1 cut(s)	1651
BspLI	GGNNCC	4 cut(s)	203, 738, 1155, 1164
BspMAI	CTGCAG	1 cut(s)	770
BspPI	GGATC	2 cut(s)	130, 1535
BspQI	GCTCTTC	1 cut(s)	874
BspT107I	GGYRCC	1 cut(s)	1162
BspTNI	GGTCTC	3 cut(s)	1264, 1394, 1411
BsrFI	RCCGGY	2 cut(s)	1844, 1969
BsrGI	TGTACA	1 cut(s)	1464
BsrI	ACTGG	3 cut(s)	187, 310, 564
BssAI	RCCGGY	2 cut(s)	1844, 1969
BssECI	CCNNGG	4 cut(s)	772, 1140, 1190, 1265
BssNI	GRCGYC	2 cut(s)	1010, 1163
BssT1I	CCWWGG	3 cut(s)	772, 1140, 1265
Bst2UI	CCWGG	2 cut(s)	1167, 1403
Bst4CI	ACNGT	4 cut(s)	708, 834, 1048, 1795
Bst6I	CTCTTC	2 cut(s)	874, 951
BstACI	GRCGYC	2 cut(s)	1010, 1163
BstAUI	TGTACA	1 cut(s)	1464
BstC8I	GCNNGC	4 cut(s)	262, 685, 1378, 1550
BstDSI	CCRYGG	2 cut(s)	1140, 1265
BstF5I	GGATG	6 cut(s)	95, 242, 442, 607, 1261, 1339
BstH2I	RGCGCY	1 cut(s)	1166
BstHHI	GCGC	1 cut(s)	1165
BstMAI	GTCTC	6 cut(s)	97, 1178, 1264, 1306, 1394, 1411
BstMWI	GCNNNNNNNGC	9 cut(s)	583, 665, 680, 949, 1007, 1040, 1064, 1070, 1444
BstNI	CCWGG	2 cut(s)	1167, 1403
BstNSI	RCATGY	1 cut(s)	1696
BstSCI	CCNGG	5 cut(s)	1155, 1165, 1401, 1559, 1638
BstSFI	CTRYAG	1 cut(s)	766
BstSLI	GKGCMC	2 cut(s)	740, 2038
BstV1I	GCAGC	9 cut(s)	223, 643, 760, 780, 1027, 1677, 1888, 1891, 2028
BstV2I	GAAGAC	1 cut(s)	683
BstX2I	RGATCY	2 cut(s)	135, 165
BstXI	CCANNNNNNTGG	2 cut(s)	146, 187
BstYI	RGATCY	2 cut(s)	135, 165
BsuRI	GGCC	8 cut(s)	484, 495, 738, 1073, 1127, 1139, 1284, 1564
BtgI	CCRYGG	2 cut(s)	1140, 1265
BtgZI	GCGATG	1 cut(s)	1368
BtsCI	GGATG	6 cut(s)	95, 242, 442, 607, 1261, 1339
BtsIMutI	CAGTG	3 cut(s)	180, 324, 839
Cac8I	GCNNGC	4 cut(s)	262, 685, 1378, 1550
CaiI	CAGNNNCTG	1 cut(s)	1034
CciI	TCATGA	1 cut(s)	1651
CfoI	GCGC	1 cut(s)	1165
Cfr10I	RCCGGY	2 cut(s)	1844, 1969
Cfr13I	GGNCC	5 cut(s)	362, 736, 737, 1153, 1563
CseI	GACGC	1 cut(s)	999
Csp6I	GTAC	7 cut(s)	730, 861, 973, 1051, 1345, 1465, 1978
CspAI	ACCGGT	1 cut(s)	1969
CspCI	CAANNNNNGTGG	2 cut(s)	1828, 1863
CviQI	GTAC	7 cut(s)	730, 861, 973, 1051, 1345, 1465, 1978
DinI	GGCGCC	1 cut(s)	1164
DriI	GACNNNNNGTC	1 cut(s)	148
Eam1104I	CTCTTC	2 cut(s)	874, 951
Eam1105I	GACNNNNNGTC	1 cut(s)	148
EarI	CTCTTC	2 cut(s)	874, 951
EciI	GGCGGA	2 cut(s)	1045, 1902
Eco130I	CCWWGG	3 cut(s)	772, 1140, 1265
Eco147I	AGGCCT	1 cut(s)	495
Eco24I	GRGCYC	1 cut(s)	740
Eco31I	GGTCTC	3 cut(s)	1264, 1394, 1411
Eco47I	GGWCC	2 cut(s)	362, 1153
Eco57I	CTGAAG	1 cut(s)	219
Eco88I	CYCGRG	1 cut(s)	1348
EcoO109I	RGGNCCY	3 cut(s)	362, 737, 1153
EcoRII	CCWGG	2 cut(s)	1165, 1401
EcoT14I	CCWWGG	3 cut(s)	772, 1140, 1265
EcoT38I	GRGCYC	1 cut(s)	740
EgeI	GGCGCC	1 cut(s)	1164
EheI	GGCGCC	1 cut(s)	1164
ErhI	CCWWGG	3 cut(s)	772, 1140, 1265
FaqI	GGGAC	3 cut(s)	1543, 1750, 1804
FauI	CCCGC	3 cut(s)	1385, 1557, 1707
FbaI	TGATCA	2 cut(s)	328, 1810
FokI	GGATG	6 cut(s)	82, 229, 449, 614, 1248, 1326
FriOI	GRGCYC	1 cut(s)	740
FspBI	CTAG	3 cut(s)	864, 1659, 1944
GlaI	GCGC	1 cut(s)	1164
GsaI	CCCAGC	3 cut(s)	748, 1038, 1548
GsuI	CTGGAG	1 cut(s)	1806
HaeII	RGCGCY	1 cut(s)	1166
HaeIII	GGCC	8 cut(s)	484, 495, 738, 1073, 1127, 1139, 1284, 1564
HapII	CCGG	6 cut(s)	431, 1157, 1561, 1640, 1845, 1970
HgaI	GACGC	1 cut(s)	999
HhaI	GCGC	1 cut(s)	1165
Hin1I	GRCGYC	2 cut(s)	1010, 1163
Hin6I	GCGC	1 cut(s)	1163
HinP1I	GCGC	1 cut(s)	1163
HincII	GTYRAC	1 cut(s)	1863
HindII	GTYRAC	1 cut(s)	1863
HinfI	GANTC	9 cut(s)	72, 440, 1114, 1186, 1201, 1607, 1648, 1655, 1727
HpaII	CCGG	6 cut(s)	431, 1157, 1561, 1640, 1845, 1970
HphI	GGTGA	8 cut(s)	115, 169, 620, 851, 1624, 1811, 1909, 2012
Hpy166II	GTNNAC	4 cut(s)	275, 842, 1051, 1863
Hpy188I	TCNGA	8 cut(s)	135, 316, 342, 1191, 1200, 1525, 1601, 1612
Hpy8I	GTNNAC	4 cut(s)	275, 842, 1051, 1863
Hpy99I	CGWCG	3 cut(s)	1015, 1177, 1762
HpyAV	CCTTC	8 cut(s)	243, 464, 534, 695, 991, 1063, 1144, 1991
HpyCH4III	ACNGT	4 cut(s)	708, 834, 1048, 1795
HpyCH4IV	ACGT	2 cut(s)	1279, 1486
HpyCH4V	TGCA	7 cut(s)	541, 634, 768, 922, 1535, 1696, 1876
HpyF10VI	GCNNNNNNNGC	9 cut(s)	583, 665, 680, 949, 1007, 1040, 1064, 1070, 1444
HpySE526I	ACGT	2 cut(s)	1279, 1486
Hsp92I	GRCGYC	2 cut(s)	1010, 1163
HspAI	GCGC	1 cut(s)	1163
KasI	GGCGCC	1 cut(s)	1162
Ksp22I	TGATCA	2 cut(s)	328, 1810
LguI	GCTCTTC	1 cut(s)	874
LmnI	GCTCC	4 cut(s)	905, 1031, 1092, 1744
Lsp1109I	GCAGC	9 cut(s)	223, 643, 760, 780, 1027, 1677, 1888, 1891, 2028
LweI	GCATC	3 cut(s)	595, 1561, 1711
MaeI	CTAG	3 cut(s)	864, 1659, 1944
MaeII	ACGT	2 cut(s)	1279, 1486
MaeIII	GTNAC	1 cut(s)	1685
MfeI	CAATTG	1 cut(s)	1411
MflI	RGATCY	2 cut(s)	135, 165
MhlI	GDGCHC	2 cut(s)	740, 2038
MluCI	AATT	6 cut(s)	908, 1119, 1411, 1708, 2008, 2023
Mly113I	GGCGCC	1 cut(s)	1163
MlyI	GAGTC	5 cut(s)	1123, 1180, 1601, 1649, 1736
MmeI	TCCRAC	1 cut(s)	915
MroXI	GAANNNNTTC	1 cut(s)	1332
MseI	TTAA	1 cut(s)	1422
MslI	CAYNNNNRTG	3 cut(s)	185, 191, 600
MspA1I	CMGCKG	2 cut(s)	715, 2041
MspI	CCGG	6 cut(s)	431, 1157, 1561, 1640, 1845, 1970
MspR9I	CCNGG	5 cut(s)	1157, 1167, 1403, 1561, 1640
MunI	CAATTG	1 cut(s)	1411
Mva1269I	GAATGC	2 cut(s)	1907, 1967
MvaI	CCWGG	2 cut(s)	1167, 1403
MwoI	GCNNNNNNNGC	9 cut(s)	583, 665, 680, 949, 1007, 1040, 1064, 1070, 1444
NarI	GGCGCC	1 cut(s)	1163
NciI	CCSGG	3 cut(s)	1157, 1561, 1640
NcoI	CCATGG	2 cut(s)	1140, 1265
NlaIV	GGNNCC	4 cut(s)	203, 738, 1155, 1164
NmuCI	GTSAC	1 cut(s)	1685
NspI	RCATGY	1 cut(s)	1696
PagI	TCATGA	1 cut(s)	1651
PceI	AGGCCT	1 cut(s)	495
PciSI	GCTCTTC	1 cut(s)	874
PcsI	WCGNNNNNNNCGW	1 cut(s)	1593
PctI	GAATGC	2 cut(s)	1907, 1967
PdmI	GAANNNNTTC	1 cut(s)	1332
PfeI	GAWTC	4 cut(s)	72, 440, 1201, 1648
PflMI	CCANNNNNTGG	1 cut(s)	396
PinAI	ACCGGT	1 cut(s)	1969
PleI	GAGTC	5 cut(s)	1122, 1180, 1601, 1649, 1735
PluTI	GGCGCC	1 cut(s)	1166
PpsI	GAGTC	5 cut(s)	1122, 1180, 1601, 1649, 1735
PpuMI	RGGWCCY	2 cut(s)	362, 1153
Psp5II	RGGWCCY	2 cut(s)	362, 1153
Psp6I	CCWGG	2 cut(s)	1165, 1401
PspFI	CCCAGC	3 cut(s)	744, 1034, 1544
PspGI	CCWGG	2 cut(s)	1165, 1401
PspN4I	GGNNCC	4 cut(s)	203, 738, 1155, 1164
PspOMI	GGGCCC	1 cut(s)	736
PspPI	GGNCC	5 cut(s)	362, 736, 737, 1153, 1563
PspPPI	RGGWCCY	2 cut(s)	362, 1153
PsrI	GAACNNNNNNTAC	2 cut(s)	713, 745
PstI	CTGCAG	1 cut(s)	770
PstNI	CAGNNNCTG	1 cut(s)	1034
PsuI	RGATCY	2 cut(s)	135, 165
PvuII	CAGCTG	2 cut(s)	715, 2041
RsaI	GTAC	7 cut(s)	731, 862, 974, 1052, 1346, 1466, 1979
RsaNI	GTAC	7 cut(s)	730, 861, 973, 1051, 1345, 1465, 1978
RseI	CAYNNNNRTG	3 cut(s)	185, 191, 600
SapI	GCTCTTC	1 cut(s)	874
SaqAI	TTAA	1 cut(s)	1422
Sau96I	GGNCC	5 cut(s)	362, 736, 737, 1153, 1563
ScaI	AGTACT	3 cut(s)	731, 862, 1979
SchI	GAGTC	5 cut(s)	1123, 1180, 1601, 1649, 1736
ScrFI	CCNGG	5 cut(s)	1157, 1167, 1403, 1561, 1640
SduI	GDGCHC	2 cut(s)	740, 2038
SfaNI	GCATC	3 cut(s)	595, 1561, 1711
SfcI	CTRYAG	1 cut(s)	766
SfoI	GGCGCC	1 cut(s)	1164
SinI	GGWCC	2 cut(s)	362, 1153
SmiMI	CAYNNNNRTG	3 cut(s)	185, 191, 600
SmlI	CTYRAG	2 cut(s)	1393, 1681
SmoI	CTYRAG	2 cut(s)	1393, 1681
Sse9I	AATT	6 cut(s)	908, 1119, 1411, 1708, 2008, 2023
SseBI	AGGCCT	1 cut(s)	495
SsiI	CCGC	8 cut(s)	1001, 1056, 1064, 1378, 1550, 1700, 1851, 1887
SspDI	GGCGCC	1 cut(s)	1162
SspMI	CTAG	3 cut(s)	864, 1659, 1944
StuI	AGGCCT	1 cut(s)	495
StyD4I	CCNGG	5 cut(s)	1155, 1165, 1401, 1559, 1638
StyI	CCWWGG	3 cut(s)	772, 1140, 1265
TaaI	ACNGT	4 cut(s)	708, 834, 1048, 1795
TaiI	ACGT	2 cut(s)	1282, 1489
TaqI	TCGA	5 cut(s)	1079, 1206, 1219, 1359, 1455
TasI	AATT	6 cut(s)	908, 1119, 1411, 1708, 2008, 2023
TatI	WGTACW	5 cut(s)	729, 860, 1050, 1464, 1977
TauI	GCSGC	1 cut(s)	1067
TfiI	GAWTC	4 cut(s)	72, 440, 1201, 1648
Tru1I	TTAA	1 cut(s)	1422
Tru9I	TTAA	1 cut(s)	1422
TscAI	CASTG	3 cut(s)	187, 331, 839
TseFI	GTSAC	1 cut(s)	1685
TseI	GCWGC	9 cut(s)	211, 656, 748, 768, 1040, 1665, 1876, 1879, 2041
Tsp45I	GTSAC	1 cut(s)	1685
TspDTI	ATGAA	8 cut(s)	231, 714, 1010, 1259, 1328, 1408, 1514, 1587
TspGWI	ACGGA	2 cut(s)	1294, 1332
TspRI	CASTG	3 cut(s)	187, 331, 839
Van91I	CCANNNNNTGG	1 cut(s)	396
VpaK11BI	GGWCC	2 cut(s)	362, 1153
XapI	RAATTY	4 cut(s)	908, 1119, 1708, 2023
XbaI	TCTAGA	1 cut(s)	1658
XceI	RCATGY	1 cut(s)	1696
XcmI	CCANNNNNNNNNTGG	1 cut(s)	602
XmnI	GAANNNNTTC	1 cut(s)	1332
XspI	CTAG	3 cut(s)	864, 1659, 1944
ZrmI	AGTACT	3 cut(s)	731, 862, 1979

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.