Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0005112

Physical Location & Seq

Genomic Coordinates Reverse (-)

6809005 .. 6814157

Gene Structure 5153 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1072000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGGCGAAGGGTGATGATGCAGTGAGGAAGAAGCAGAACAAGGTCAAAAGAAAGAAGCTCCACAACAAGAACGACCGTTCTTCCTCTGCAATCTCTGCCCGCGTTGCCTCCATTATTGCTGCCAAGAAGCGCCGCCATTCCGGCAAACGCCGGAAATGTCAGGGTATGTGCTTTAGCCTTCCTACCCTTGATGATCCCTTCAATGACAGGAATGGTGCAAAGGATTTTGAGAAGAAAGCAACCAAGAAACCCATGGTTTCACATAAGCATGAGAATGTGATTTTGAAAGAAAAAAGTAAAGAAATTCTCGATACTGAAATGGTGGATGGTCCAGCGCAGAAGAAGGAGATGGTAACGGTTTTGAAGGATGAGCTAAAGAAATCACTGGCATCTATTAATACCATGGCTCATAGAAGCCGAATTGACCCTGGAAATACAAAGATTCAGCTGGATGGGAATGGTGGCATCTACGGGCATCAGGGAAAGGTCTGTGAAAACTTAGATTGTCCATCTAAGTATCTTATTCAGTGCTTGAATGCCATAGAAAATTCACTTCGCTGTGATGGTACCTATGATAACGAGGAGGACAAGCCCTTGTTTGTGAGTACTTGGGGAGTTGAGTTTTGGAAATGTTATTCAGCTGGGAAGGATGTACTTGAGACAAGCAGAACCTCTTCTAAGATGGAGCAAATTGCATGGATGGTTTCCTGCACTGCTGATTCAGTTTCTAGAAAGGATGAAGAAGGTTTATCAGTCACCAGCCCATTTCTTTTGTTCCTTGTTCCATCCCAGGAGAAAGCCACAAAGGTACGTTCAGTATGCAAACCATTGAAGGCTCTTGGAATACATACAGTGAGTATACATCCTGGTGCTTCCTTGGATCACCAGATTGAAGGTCTGAAAAGCTCTGAACCTGAGATTATGATTTCAACACCTGAGAGACTTTTGGAGCTTCTTTCCTTGAAGGCCATTGATCTATCTGGGGTTTCCTTGCTGGTCATTGATGGACTGGAATCTTTCTATAGCGAAGGTTGCTTGGATAAAATAAATTCTATTCGCCAATCTATAAATGAAAAAACCCATACAGTTGTTTTCAACGATTGCCATAGATATGCCTGCGTACGAGTGGTGCAAAATCTTCTGACGGGATCAGTTCGTAGATTATCTCTAAATAGTTCTCTCACCAGTCAAAGTGCATGCATCATTCAGTCTGTAAACATGTGTCTTTCGAAAGAAAAACTGCCAAAGGCTATCGGAGTTCTTGATCAGGCTTATCGTGGTCGACACCAACCTCAGGCTTCTAAGGTGCTATATATAGTGGGGAAAGATGATAAGTATCGTAAACTAGCTACCGCTCTGAAGTTCAAGGGTTATTCCGTCACATCTGACTCAGTTTCTACAGAAGTTGAGAACAGTGTGGAAATGAAGGGCAGGACCAGGCCTGCAGTCTCCATGATTGACATAGACCAAATTGGTGCAACCGACTTCAGTGAGTGCGAATGTGTAGTTCTACCCGATTTGACCCTCTCAATTGACAGTTACGTTCAAATCCTCACGAGAATGGCTCGGTACTCTGTGAATGGCGTATTGCATAGCTTTTTTGCCAGAGAAGACGCAAAGCTTGCTGCACCGTTGATTAAGATCCTTGAACAATGTGGGCAGGCAGTGCCTGAAGCCCTAAGAAAAATGTCGTCTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD

Protein Analysis

567

Amino Acids

62.77

Weight (kDa)

9.06

Isoelectric Point (pI)

43.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	254 - 365	1.7e-08	DEAD/DEAH box helicase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005112)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28600
fragaria_vesca	FvH4_7g06330
malus_domestica	MD02G1244900.v1.1 MD07G1072000.v1.1
prunus_persica	Prupe.2G090100_v2.0.a1 Prupe.2G090100_v2.0.a1 Prupe.2G090100_v2.0.a1 Prupe.2G090100_v2.0.a1 Prupe.2G090100_v2.0.a1
pyrus_communis	pycom02g21080 pycom07g05500
rosa_chinensis	RchiOBHm_Chr1g0334181
rosa_laevigata	RLG00000029468 RLG00000029472 RLG00000029474
rosa_multiflora	Rmu_sc0003496.1_g000001 Rmu_sc0008928.1_g000002 Rmu_sc0032811.1_g000001
rosa_roxburghii	Rroxscaffold_4G00316940 Rroxscaffold_4G00316960 Rroxscaffold_4G00316970
rosa_rugosa	Rorug01G0113200
rosa_samantha	Rh1AG137100 Rh1AG137300 Rh1BG104600 Rh1CG129300 Rh1CG129500 Rh1DG142300
rosa_wichuraiana	Rw0G018010 Rw1G011410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	566
AccB1I	GGYRCC	1 cut(s)	566
AccBSI	CCGCTC	1 cut(s)	1355
AccI	GTMKAC	2 cut(s)	859, 1282
AccII	CGCG	1 cut(s)	102
AciI	CCGC	3 cut(s)	100, 133, 1353
AclWI	GGATC	4 cut(s)	188, 888, 1156, 1636
AcsI	RAATTY	3 cut(s)	303, 547, 1048
AcuI	CTGAAG	3 cut(s)	1379, 1471, 1692
AfaI	GTAC	6 cut(s)	568, 607, 654, 810, 1122, 1571
AfiI	CCNNNNNNNGG	1 cut(s)	1294
AflIII	ACRYGT	1 cut(s)	1218
AjnI	CCWGG	4 cut(s)	427, 789, 865, 1436
AluBI	AGCT	9 cut(s)	58, 373, 448, 641, 906, 952, 1349, 1596, 1621
AluI	AGCT	9 cut(s)	58, 373, 448, 641, 906, 952, 1349, 1596, 1621
Alw26I	GTCTC	3 cut(s)	653, 934, 1453
AlwI	GGATC	4 cut(s)	188, 888, 1156, 1636
AlwNI	CAGNNNCTG	1 cut(s)	1670
AoxI	GGCC	2 cut(s)	966, 1439
ApeKI	GCWGC	2 cut(s)	119, 1625
ApoI	RAATTY	3 cut(s)	303, 547, 1048
AseI	ATTAAT	1 cut(s)	396
Asp700I	GAANNNNTTC	1 cut(s)	673
Asp718I	GGTACC	1 cut(s)	566
AspLEI	GCGC	2 cut(s)	132, 337
AspS9I	GGNCC	2 cut(s)	329, 1434
AsuHPI	GGTGA	4 cut(s)	23, 748, 875, 1174
AsuII	TTCGAA	1 cut(s)	1229
AvaII	GGWCC	2 cut(s)	329, 1434
AxyI	CCTNAGG	1 cut(s)	1293
BanI	GGYRCC	1 cut(s)	566
BauI	CACGAG	1 cut(s)	1555
BbsI	GAAGAC	2 cut(s)	1617, 1686
BbvI	GCAGC	2 cut(s)	106, 1612
BccI	CCATC	9 cut(s)	320, 343, 446, 517, 557, 676, 694, 793, 998
BciT130I	CCWGG	4 cut(s)	429, 791, 867, 1438
BclI	TGATCA	1 cut(s)	1264
BcoDI	GTCTC	3 cut(s)	653, 934, 1453
BfaI	CTAG	2 cut(s)	729, 1346
BfmI	CTRYAG	3 cut(s)	1021, 1398, 1443
BfoI	RGCGCY	1 cut(s)	133
BglI	GCCNNNNNGGC	1 cut(s)	141
BisI	GCNGC	3 cut(s)	120, 133, 1626
BlsI	GCNGC	3 cut(s)	121, 134, 1627
BmcAI	AGTACT	1 cut(s)	607
Bme1390I	CCNGG	4 cut(s)	429, 791, 867, 1438
Bme18I	GGWCC	2 cut(s)	329, 1434
BmgT120I	GGNCC	2 cut(s)	329, 1434
BmiI	GGNNCC	1 cut(s)	568
BmrFI	CCNGG	4 cut(s)	429, 791, 867, 1438
BmsI	GCATC	5 cut(s)	7, 398, 474, 484, 1209
BpiI	GAAGAC	2 cut(s)	1617, 1686
BplI	GAGNNNNNCTC	2 cut(s)	1549, 1581
Bpu14I	TTCGAA	1 cut(s)	1229
BpuEI	CTTGAG	1 cut(s)	677
BsaBI	GATNNNNATC	2 cut(s)	1335, 1640
BsaJI	CCNNGG	5 cut(s)	252, 402, 427, 789, 876
Bsc4I	CCNNNNNNNGG	1 cut(s)	1294
Bse1I	ACTGG	3 cut(s)	390, 1014, 1185
Bse21I	CCTNAGG	1 cut(s)	1293
Bse8I	GATNNNNATC	2 cut(s)	1335, 1640
BseBI	CCWGG	4 cut(s)	429, 791, 867, 1438
BseDI	CCNNGG	5 cut(s)	252, 402, 427, 789, 876
BseGI	GGATG	8 cut(s)	331, 373, 457, 655, 705, 742, 785, 862
BseJI	GATNNNNATC	2 cut(s)	1335, 1640
BseLI	CCNNNNNNNGG	1 cut(s)	1294
BseMII	CTCAG	4 cut(s)	906, 927, 1307, 1404
BseNI	ACTGG	3 cut(s)	390, 1014, 1185
BseRI	GAGGAG	1 cut(s)	596
BseXI	GCAGC	2 cut(s)	106, 1612
BseYI	CCCAGC	1 cut(s)	641
BsgI	GTGCAG	2 cut(s)	694, 1611
Bsh1236I	CGCG	1 cut(s)	102
Bsh1285I	CGRYCG	1 cut(s)	76
BshFI	GGCC	2 cut(s)	968, 1441
BshNI	GGYRCC	1 cut(s)	566
BsiEI	CGRYCG	1 cut(s)	76
BsiSI	CCGG	2 cut(s)	141, 151
BsiWI	CGTACG	1 cut(s)	1120
BslI	CCNNNNNNNGG	1 cut(s)	1294
BsmAI	GTCTC	3 cut(s)	653, 934, 1453
BsmI	GAATGC	1 cut(s)	541
BsnI	GGCC	2 cut(s)	968, 1441
Bsp119I	TTCGAA	1 cut(s)	1229
Bsp143I	GATC	6 cut(s)	193, 880, 973, 1148, 1264, 1641
Bsp19I	CCATGG	2 cut(s)	252, 402
BspACI	CCGC	3 cut(s)	100, 133, 1353
BspANI	GGCC	2 cut(s)	968, 1441
BspCNI	CTCAG	4 cut(s)	907, 928, 1306, 1403
BspFNI	CGCG	1 cut(s)	102
BspLI	GGNNCC	1 cut(s)	568
BspMAI	CTGCAG	1 cut(s)	1447
BspPI	GGATC	4 cut(s)	188, 888, 1156, 1636
BspT104I	TTCGAA	1 cut(s)	1229
BspT107I	GGYRCC	1 cut(s)	566
BsrBI	CCGCTC	1 cut(s)	1355
BsrI	ACTGG	3 cut(s)	390, 1014, 1185
BssECI	CCNNGG	5 cut(s)	252, 402, 427, 789, 876
BssMI	GATC	6 cut(s)	193, 880, 973, 1148, 1264, 1641
BssNAI	GTATAC	1 cut(s)	860
BssSI	CACGAG	1 cut(s)	1555
BssT1I	CCWWGG	3 cut(s)	252, 402, 876
Bst1107I	GTATAC	1 cut(s)	860
Bst2BI	CACGAG	1 cut(s)	1555
Bst2UI	CCWGG	4 cut(s)	429, 791, 867, 1438
Bst4CI	ACNGT	7 cut(s)	77, 358, 853, 1087, 1415, 1538, 1632
Bst6I	CTCTTC	1 cut(s)	679
BstAPI	GCANNNNNTGC	3 cut(s)	95, 1622, 1666
BstBI	TTCGAA	1 cut(s)	1229
BstC8I	GCNNGC	6 cut(s)	100, 1117, 1198, 1443, 1623, 1662
BstDEI	CTNAG	9 cut(s)	499, 513, 678, 915, 936, 1293, 1302, 1390, 1679
BstDSI	CCRYGG	2 cut(s)	252, 402
BstF5I	GGATG	8 cut(s)	331, 373, 457, 655, 705, 742, 785, 862
BstFNI	CGCG	1 cut(s)	102
BstH2I	RGCGCY	1 cut(s)	133
BstHHI	GCGC	2 cut(s)	132, 337
BstKTI	GATC	6 cut(s)	196, 883, 976, 1151, 1267, 1644
BstMAI	GTCTC	3 cut(s)	653, 934, 1453
BstMBI	GATC	6 cut(s)	193, 880, 973, 1148, 1264, 1641
BstMCI	CGRYCG	1 cut(s)	76
BstMWI	GCNNNNNNNGC	6 cut(s)	95, 104, 141, 1032, 1622, 1666
BstNI	CCWGG	4 cut(s)	429, 791, 867, 1438
BstNSI	RCATGY	2 cut(s)	1200, 1222
BstSCI	CCNGG	4 cut(s)	427, 789, 865, 1436
BstSFI	CTRYAG	3 cut(s)	1021, 1398, 1443
BstUI	CGCG	1 cut(s)	102
BstV1I	GCAGC	2 cut(s)	106, 1612
BstV2I	GAAGAC	2 cut(s)	1617, 1686
BstX2I	RGATCY	1 cut(s)	1641
BstYI	RGATCY	1 cut(s)	1641
BstZ17I	GTATAC	1 cut(s)	860
Bsu36I	CCTNAGG	1 cut(s)	1293
BsuRI	GGCC	2 cut(s)	968, 1441
BtgI	CCRYGG	2 cut(s)	252, 402
BtsCI	GGATG	8 cut(s)	331, 373, 457, 655, 705, 742, 785, 862
BtsI	GCAGTG	3 cut(s)	27, 711, 1671
BtsIMutI	CAGTG	8 cut(s)	27, 383, 533, 711, 858, 1420, 1495, 1671
Cac8I	GCNNGC	6 cut(s)	100, 1117, 1198, 1443, 1623, 1662
CaiI	CAGNNNCTG	1 cut(s)	1670
CfoI	GCGC	2 cut(s)	132, 337
Cfr13I	GGNCC	2 cut(s)	329, 1434
CseI	GACGC	1 cut(s)	1622
Csp6I	GTAC	6 cut(s)	567, 606, 653, 809, 1121, 1570
CviAII	CATG	7 cut(s)	253, 269, 403, 696, 1197, 1219, 1453
CviQI	GTAC	6 cut(s)	567, 606, 653, 809, 1121, 1570
DdeI	CTNAG	9 cut(s)	499, 513, 678, 915, 936, 1293, 1302, 1390, 1679
DpnI	GATC	6 cut(s)	195, 882, 975, 1150, 1266, 1643
DpnII	GATC	6 cut(s)	193, 880, 973, 1148, 1264, 1641
Eam1104I	CTCTTC	1 cut(s)	679
EarI	CTCTTC	1 cut(s)	679
Eco130I	CCWWGG	3 cut(s)	252, 402, 876
Eco147I	AGGCCT	1 cut(s)	1441
Eco47I	GGWCC	2 cut(s)	329, 1434
Eco57I	CTGAAG	3 cut(s)	1379, 1471, 1692
Eco81I	CCTNAGG	1 cut(s)	1293
EcoRII	CCWGG	4 cut(s)	427, 789, 865, 1436
EcoT14I	CCWWGG	3 cut(s)	252, 402, 876
EcoT22I	ATGCAT	1 cut(s)	1202
ErhI	CCWWGG	3 cut(s)	252, 402, 876
FaeI	CATG	7 cut(s)	256, 272, 406, 699, 1200, 1222, 1456
FatI	CATG	7 cut(s)	252, 268, 402, 695, 1196, 1218, 1452
FauI	CCCGC	1 cut(s)	107
FbaI	TGATCA	1 cut(s)	1264
FblI	GTMKAC	2 cut(s)	859, 1282
Fnu4HI	GCNGC	3 cut(s)	120, 133, 1626
FokI	GGATG	8 cut(s)	338, 380, 464, 662, 712, 749, 772, 849
Fsp4HI	GCNGC	3 cut(s)	120, 133, 1626
FspBI	CTAG	2 cut(s)	729, 1346
GlaI	GCGC	2 cut(s)	131, 336
GluI	GCNGC	3 cut(s)	120, 133, 1626
GsaI	CCCAGC	1 cut(s)	645
HaeII	RGCGCY	1 cut(s)	133
HaeIII	GGCC	2 cut(s)	968, 1441
HapII	CCGG	2 cut(s)	141, 151
HgaI	GACGC	1 cut(s)	1622
HhaI	GCGC	2 cut(s)	132, 337
Hin1II	CATG	7 cut(s)	256, 272, 406, 699, 1200, 1222, 1456
Hin6I	GCGC	2 cut(s)	130, 335
HinP1I	GCGC	2 cut(s)	130, 335
HincII	GTYRAC	1 cut(s)	1283
HindII	GTYRAC	1 cut(s)	1283
HindIII	AAGCTT	1 cut(s)	1619
HinfI	GANTC	4 cut(s)	442, 719, 1013, 1388
HpaII	CCGG	2 cut(s)	141, 151
HphI	GGTGA	4 cut(s)	23, 748, 875, 1174
Hpy166II	GTNNAC	4 cut(s)	860, 1216, 1283, 1343
Hpy188I	TCNGA	6 cut(s)	900, 910, 1143, 1256, 1359, 1387
Hpy188III	TCNNGA	4 cut(s)	308, 729, 1262, 1555
Hpy8I	GTNNAC	4 cut(s)	860, 1216, 1283, 1343
HpyCH4III	ACNGT	7 cut(s)	77, 358, 853, 1087, 1415, 1538, 1632
HpyCH4IV	ACGT	2 cut(s)	811, 1542
HpyF10VI	GCNNNNNNNGC	6 cut(s)	95, 104, 141, 1032, 1622, 1666
HpyF3I	CTNAG	9 cut(s)	499, 513, 678, 915, 936, 1293, 1302, 1390, 1679
HpySE526I	ACGT	2 cut(s)	811, 1542
Hsp92II	CATG	7 cut(s)	256, 272, 406, 699, 1200, 1222, 1456
HspAI	GCGC	2 cut(s)	130, 335
KpnI	GGTACC	1 cut(s)	570
Ksp22I	TGATCA	1 cut(s)	1264
Kzo9I	GATC	6 cut(s)	193, 880, 973, 1148, 1264, 1641
LmnI	GCTCC	3 cut(s)	63, 685, 949
Lsp1109I	GCAGC	2 cut(s)	106, 1612
LweI	GCATC	5 cut(s)	7, 398, 474, 484, 1209
MaeI	CTAG	2 cut(s)	729, 1346
MaeII	ACGT	2 cut(s)	811, 1542
MaeIII	GTNAC	4 cut(s)	352, 754, 1378, 1538
MalI	GATC	6 cut(s)	195, 882, 975, 1150, 1266, 1643
MbiI	CCGCTC	1 cut(s)	1355
MboI	GATC	6 cut(s)	193, 880, 973, 1148, 1264, 1641
MboII	GAAGA	9 cut(s)	40, 72, 244, 352, 666, 752, 1130, 1622, 1686
MfeI	CAATTG	1 cut(s)	1530
MflI	RGATCY	1 cut(s)	1641
MluCI	AATT	7 cut(s)	303, 420, 547, 690, 1048, 1470, 1530
MlyI	GAGTC	1 cut(s)	1382
MnlI	CCTC	9 cut(s)	18, 94, 118, 574, 577, 682, 1302, 1535, 1562
Mph1103I	ATGCAT	1 cut(s)	1202
MroXI	GAANNNNTTC	1 cut(s)	673
MseI	TTAA	2 cut(s)	396, 1638
MslI	CAYNNNNRTG	5 cut(s)	267, 273, 867, 1110, 1559
MspA1I	CMGCKG	2 cut(s)	448, 641
MspI	CCGG	2 cut(s)	141, 151
MspR9I	CCNGG	4 cut(s)	429, 791, 867, 1438
MunI	CAATTG	1 cut(s)	1530
Mva1269I	GAATGC	1 cut(s)	541
MvaI	CCWGG	4 cut(s)	429, 791, 867, 1438
MvnI	CGCG	1 cut(s)	102
MwoI	GCNNNNNNNGC	6 cut(s)	95, 104, 141, 1032, 1622, 1666
NcoI	CCATGG	2 cut(s)	252, 402
NdeII	GATC	6 cut(s)	193, 880, 973, 1148, 1264, 1641
NlaIII	CATG	7 cut(s)	256, 272, 406, 699, 1200, 1222, 1456
NlaIV	GGNNCC	1 cut(s)	568
NmuCI	GTSAC	2 cut(s)	754, 1378
NsiI	ATGCAT	1 cut(s)	1202
NspI	RCATGY	2 cut(s)	1200, 1222
NspV	TTCGAA	1 cut(s)	1229
PaeI	GCATGC	1 cut(s)	1200
PceI	AGGCCT	1 cut(s)	1441
PciI	ACATGT	1 cut(s)	1218
PctI	GAATGC	1 cut(s)	541
PdmI	GAANNNNTTC	1 cut(s)	673
PfeI	GAWTC	3 cut(s)	442, 719, 1013
Pfl23II	CGTACG	1 cut(s)	1120
PkrI	GCNGC	3 cut(s)	121, 134, 1627
PleI	GAGTC	1 cut(s)	1382
PpsI	GAGTC	1 cut(s)	1382
PscI	ACATGT	1 cut(s)	1218
PshBI	ATTAAT	1 cut(s)	396
Psp6I	CCWGG	4 cut(s)	427, 789, 865, 1436
PspFI	CCCAGC	1 cut(s)	641
PspGI	CCWGG	4 cut(s)	427, 789, 865, 1436
PspLI	CGTACG	1 cut(s)	1120
PspN4I	GGNNCC	1 cut(s)	568
PspPI	GGNCC	2 cut(s)	329, 1434
PstI	CTGCAG	1 cut(s)	1447
PstNI	CAGNNNCTG	1 cut(s)	1670
PsuI	RGATCY	1 cut(s)	1641
PvuII	CAGCTG	2 cut(s)	448, 641
RsaI	GTAC	6 cut(s)	568, 607, 654, 810, 1122, 1571
RsaNI	GTAC	6 cut(s)	567, 606, 653, 809, 1121, 1570
RseI	CAYNNNNRTG	5 cut(s)	267, 273, 867, 1110, 1559
SalI	GTCGAC	1 cut(s)	1281
SaqAI	TTAA	2 cut(s)	396, 1638
SatI	GCNGC	3 cut(s)	120, 133, 1626
Sau3AI	GATC	6 cut(s)	193, 880, 973, 1148, 1264, 1641
Sau96I	GGNCC	2 cut(s)	329, 1434
ScaI	AGTACT	1 cut(s)	607
SchI	GAGTC	1 cut(s)	1382
ScrFI	CCNGG	4 cut(s)	429, 791, 867, 1438
SfaNI	GCATC	5 cut(s)	7, 398, 474, 484, 1209
SfcI	CTRYAG	3 cut(s)	1021, 1398, 1443
SfuI	TTCGAA	1 cut(s)	1229
SinI	GGWCC	2 cut(s)	329, 1434
SmiMI	CAYNNNNRTG	5 cut(s)	267, 273, 867, 1110, 1559
SmlI	CTYRAG	1 cut(s)	656
SmoI	CTYRAG	1 cut(s)	656
SphI	GCATGC	1 cut(s)	1200
Sse9I	AATT	7 cut(s)	303, 420, 547, 690, 1048, 1470, 1530
SseBI	AGGCCT	1 cut(s)	1441
SsiI	CCGC	3 cut(s)	100, 133, 1353
SspMI	CTAG	2 cut(s)	729, 1346
StuI	AGGCCT	1 cut(s)	1441
StyD4I	CCNGG	4 cut(s)	427, 789, 865, 1436
StyI	CCWWGG	3 cut(s)	252, 402, 876
TaaI	ACNGT	7 cut(s)	77, 358, 853, 1087, 1415, 1538, 1632
TaiI	ACGT	2 cut(s)	814, 1545
TaqI	TCGA	3 cut(s)	309, 1229, 1282
TasI	AATT	7 cut(s)	303, 420, 547, 690, 1048, 1470, 1530
TatI	WGTACW	2 cut(s)	605, 652
TauI	GCSGC	1 cut(s)	135
TfiI	GAWTC	3 cut(s)	442, 719, 1013
Tru1I	TTAA	2 cut(s)	396, 1638
Tru9I	TTAA	2 cut(s)	396, 1638
TscAI	CASTG	8 cut(s)	27, 390, 533, 718, 858, 1420, 1495, 1671
TseFI	GTSAC	2 cut(s)	754, 1378
TseI	GCWGC	2 cut(s)	119, 1625
Tsp45I	GTSAC	2 cut(s)	754, 1378
TspDTI	ATGAA	4 cut(s)	753, 1086, 1439, 1686
TspGWI	ACGGA	1 cut(s)	1366
TspRI	CASTG	8 cut(s)	27, 390, 533, 718, 858, 1420, 1495, 1671
VpaK11BI	GGWCC	2 cut(s)	329, 1434
VspI	ATTAAT	1 cut(s)	396
XapI	RAATTY	3 cut(s)	303, 547, 1048
XbaI	TCTAGA	1 cut(s)	728
XceI	RCATGY	2 cut(s)	1200, 1222
XcmI	CCANNNNNNNNNTGG	1 cut(s)	250
XmiI	GTMKAC	2 cut(s)	859, 1282
XmnI	GAANNNNTTC	1 cut(s)	673
XspI	CTAG	2 cut(s)	729, 1346
ZrmI	AGTACT	1 cut(s)	607
Zsp2I	ATGCAT	1 cut(s)	1202

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.