MD07G1281800.v1.1

membrane-associated kinase regulator

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
34491764 .. 34492383
620 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1281800.v1.1.491

Sequence Viewer

Length: 429 bp
ATGGAAACTCTGTACTTCCTCAAGTTCTGGAAACCCAATGCCTCCACCGGCACACCTCCAAATCCTTCCGTTGCAAAAGACAACGAGGTCGAAGAGGAAGAGGAAGATTCTTTCTTCGACTTGGAATTAAGTTTCGACATCATCCAAAGTTCACAAGAAAACAACATCCTCGACTCCAAACCAAAACCAAACACCTCGGACAAAACAGCCGGCGGCAAACAAACCCTTTCTCTGTCCGCTTCCGATCCCATTTCCAAAAGAAAAATCCTCCCTATTGAGCCAGTTTCCAGGCCTCCTCAGTCCCCCATCGCTCTCCTTAAATCAGCCCCAAAGTTCGGAGCTTTAAAGTTCAAAAATCCCAGACAGAAAACAGAGAAAAAAACAGGGGAAAAAGCTGAGTGCGAGGTTTCGATGGAGTCCCAGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

143

Amino Acids

15.78

Weight (kDa)

5.66

Isoelectric Point (pI)

63.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 86
AciI CCGC 2 cut(s) 213, 237
AclWI GGATC 1 cut(s) 239
AfaI GTAC 1 cut(s) 14
AfiI CCNNNNNNNGG 1 cut(s) 335
AgsI TTSAA 1 cut(s) 352
AjnI CCWGG 1 cut(s) 287
AluBI AGCT 2 cut(s) 341, 395
AluI AGCT 2 cut(s) 341, 395
AlwI GGATC 1 cut(s) 239
AoxI GGCC 1 cut(s) 290
BccI CCATC 2 cut(s) 314, 406
BciT130I CCWGG 1 cut(s) 289
BisI GCNGC 1 cut(s) 214
BlsI GCNGC 1 cut(s) 215
Bme1390I CCNGG 1 cut(s) 289
BmrFI CCNGG 1 cut(s) 289
BpuEI CTTGAG 1 cut(s) 5
BsaJI CCNNGG 1 cut(s) 195
Bsc4I CCNNNNNNNGG 1 cut(s) 335
Bse118I RCCGGY 2 cut(s) 47, 209
Bse1I ACTGG 1 cut(s) 281
BseBI CCWGG 1 cut(s) 289
BseDI CCNNGG 1 cut(s) 195
BseGI GGATG 2 cut(s) 141, 165
BseLI CCNNNNNNNGG 1 cut(s) 335
BseMII CTCAG 2 cut(s) 311, 387
BseNI ACTGG 1 cut(s) 281
BseRI GAGGAG 1 cut(s) 285
BshFI GGCC 1 cut(s) 292
BsiSI CCGG 2 cut(s) 48, 210
BslFI GGGAC 2 cut(s) 286, 403
BslI CCNNNNNNNGG 1 cut(s) 335
BsmFI GGGAC 2 cut(s) 286, 403
BsnI GGCC 1 cut(s) 292
Bsp143I GATC 1 cut(s) 244
BspACI CCGC 2 cut(s) 213, 237
BspANI GGCC 1 cut(s) 292
BspCNI CTCAG 2 cut(s) 310, 388
BspPI GGATC 1 cut(s) 239
BsrFI RCCGGY 2 cut(s) 47, 209
BsrI ACTGG 1 cut(s) 281
BssAI RCCGGY 2 cut(s) 47, 209
BssECI CCNNGG 1 cut(s) 195
BssMI GATC 1 cut(s) 244
Bst2UI CCWGG 1 cut(s) 289
Bst6I CTCTTC 2 cut(s) 87, 93
BstC8I GCNNGC 1 cut(s) 211
BstDEI CTNAG 2 cut(s) 297, 396
BstF5I GGATG 2 cut(s) 141, 165
BstKTI GATC 1 cut(s) 247
BstMBI GATC 1 cut(s) 244
BstNI CCWGG 1 cut(s) 289
BstSCI CCNGG 1 cut(s) 287
BsuRI GGCC 1 cut(s) 292
BtgZI GCGATG 1 cut(s) 292
BtsCI GGATG 2 cut(s) 141, 165
Cac8I GCNNGC 1 cut(s) 211
Cfr10I RCCGGY 2 cut(s) 47, 209
Csp6I GTAC 1 cut(s) 13
CviJI RGCY 6 cut(s) 209, 280, 292, 326, 341, 395
CviKI_1 RGCY 6 cut(s) 209, 280, 292, 326, 341, 395
CviQI GTAC 1 cut(s) 13
DdeI CTNAG 2 cut(s) 297, 396
DpnI GATC 1 cut(s) 246
DpnII GATC 1 cut(s) 244
DraI TTTAAA 1 cut(s) 345
DrdI GACNNNNNNGTC 1 cut(s) 86
DseDI GACNNNNNNGTC 1 cut(s) 86
Eam1104I CTCTTC 2 cut(s) 87, 93
EarI CTCTTC 2 cut(s) 87, 93
Eco147I AGGCCT 1 cut(s) 292
EcoRII CCWGG 1 cut(s) 287
FaqI GGGAC 2 cut(s) 286, 403
Fnu4HI GCNGC 1 cut(s) 214
FokI GGATG 2 cut(s) 128, 152
Fsp4HI GCNGC 1 cut(s) 214
GluI GCNGC 1 cut(s) 214
HaeIII GGCC 1 cut(s) 292
HapII CCGG 2 cut(s) 48, 210
HinfI GANTC 3 cut(s) 107, 173, 416
HpaII CCGG 2 cut(s) 48, 210
Hpy166II GTNNAC 1 cut(s) 152
Hpy188I TCNGA 3 cut(s) 199, 244, 338
Hpy188III TCNNGA 1 cut(s) 28
Hpy8I GTNNAC 1 cut(s) 152
HpyAV CCTTC 1 cut(s) 75
HpyCH4V TGCA 1 cut(s) 74
HpyF3I CTNAG 2 cut(s) 297, 396
KroI GCCGGC 1 cut(s) 209
KroNI GCCGGC 1 cut(s) 211
Kzo9I GATC 1 cut(s) 244
LmnI GCTCC 1 cut(s) 338
LpnPI CCDG 8 cut(s) 13, 61, 223, 274, 294, 301, 369, 373
MalI GATC 1 cut(s) 246
MboI GATC 1 cut(s) 244
MboII GAAGA 4 cut(s) 104, 106, 110, 116
MluCI AATT 1 cut(s) 125
MlyI GAGTC 2 cut(s) 167, 425
MroNI GCCGGC 1 cut(s) 209
MseI TTAA 3 cut(s) 128, 318, 344
MspI CCGG 2 cut(s) 48, 210
MspR9I CCNGG 1 cut(s) 289
MvaI CCWGG 1 cut(s) 289
NaeI GCCGGC 1 cut(s) 211
NdeII GATC 1 cut(s) 244
NgoMIV GCCGGC 1 cut(s) 209
PceI AGGCCT 1 cut(s) 292
PdiI GCCGGC 1 cut(s) 211
PfeI GAWTC 1 cut(s) 107
PkrI GCNGC 1 cut(s) 215
PleI GAGTC 2 cut(s) 167, 424
PpsI GAGTC 2 cut(s) 167, 424
Psp6I CCWGG 1 cut(s) 287
PspGI CCWGG 1 cut(s) 287
RsaI GTAC 1 cut(s) 14
RsaNI GTAC 1 cut(s) 13
SaqAI TTAA 3 cut(s) 128, 318, 344
SatI GCNGC 1 cut(s) 214
Sau3AI GATC 1 cut(s) 244
SchI GAGTC 2 cut(s) 167, 425
ScrFI CCNGG 1 cut(s) 289
SetI ASST 6 cut(s) 58, 90, 197, 343, 397, 408
SmlI CTYRAG 1 cut(s) 20
SmoI CTYRAG 1 cut(s) 20
Sse9I AATT 1 cut(s) 125
SseBI AGGCCT 1 cut(s) 292
SsiI CCGC 2 cut(s) 213, 237
StuI AGGCCT 1 cut(s) 292
StyD4I CCNGG 1 cut(s) 287
TaqI TCGA 5 cut(s) 90, 117, 135, 171, 410
TasI AATT 1 cut(s) 125
TatI WGTACW 1 cut(s) 12
TauI GCSGC 1 cut(s) 216
TfiI GAWTC 1 cut(s) 107
Tru1I TTAA 3 cut(s) 128, 318, 344
Tru9I TTAA 3 cut(s) 128, 318, 344
TspGWI ACGGA 1 cut(s) 58
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.