Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0009504

Physical Location & Seq

Genomic Coordinates Reverse (-)

29011965 .. 29014224

Gene Structure 2260 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G303400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1131 bp

ATGGAAACTCTCCATTTCCTCAAGTTCTGGAAACCCAACAATGCCTCCACCATTGCAGTTCCAAGTCCTTTAGTTGAAACAGACCATGAGGTTGAAGAAGAAGAAGAAGAAGACTCATTCTTCGACTTGGAATTAAGTTTCCATATCATGAACAAAAACGACACAAACAAGGCTTGCACAGATGATGCAACCCAGCAGGAAAGTAACAGGCTTGATTCCATTCCAAAATCAAACAACTCAGCCAAAAAAGCCGGCTGTACCGAACCCTGTCTTTCCAAATCGCCCCTTTCTCTGTCGCCTTCTGATCCAATTTCCAAAAGGAAAATCCTCCCCATTGAGCCCATTTTCAAGCCTCAGTCCCCAATTGCTCTCCTTAAGTCGGCTCCAAAGTTTGGAGCTTTCATGTTGAAGAAGCCCAAAGCAACAAAAACAACAGCAAAGAAAACAGGGGAAGCAGAGTCCAAAGTTTTGATGGAGACCCAGAAGCAGAAAAGCAAAGAAGGCAACCTCTTCGGTGTGAAACTTCTCAATACTGAAGAACATCAAAACCCTTCTAAGCTCACCAGAGAAAACAGTTCCAGGAGGAACGGAAGCAGGCAACAGAACCAGAGCTCAGAAGACTCCAAAACAGAGCGATTCTCGAAAGATATGATACAAAAGTACCTGAACCTAATCAAGCCACTTTATATGAAGGTTTCCAAAAAGTGCAGTGAGAAGGTGAAGCCTTCTGGTAATATTCCAATGTCATCGCCGAATTGTTCTCCTGCTATGCCGGTATTATCTATGTGTTCGCCCAAGAAGGAGAAGCAGGGGAATATTCCTGCCGGAATTAGAGTTGTTTGTAAGAACTTGGGGAAGAGCAAATCGGCCACGACGATGGCAGGGGCGCCACAGGTGAAACGGAGAGACGATTCTCTGTTGCTGCAGCATGATGGGATTCAGAGTGCCATTCTACATTGCAAGAGATCATTCAATTCTAGAGATTCTTCCTCGTTATCAAGGTCAGCCAGTGATTCTTCATCCATGAACTCGTACTCTACTGATTCTTCTCTGTTATCACGGTTTGCAAGTGAATCCCACGACAGATCAGCGAGAAGCTCCATTGAGGAAGGGGTTTGTGCTGAAATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

377

Amino Acids

41.54

Weight (kDa)

9.22

Isoelectric Point (pI)

73.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009504)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52870 AT5G52870
fragaria_vesca	FvH4_7g30580 FvH4_7g30580 FvH4_7g30580
malus_domestica	MD01G1211000.v1.1 MD07G1281700.v1.1 MD07G1281800.v1.1
prunus_persica	Prupe.2G303400_v2.0.a1
pyrus_communis	pycom01g22150 pycom07g25570
rosa_chinensis	RchiOBHm_Chr1g0379481
rosa_laevigata	RLG00000026399
rosa_multiflora	Rmu_sc0006761.1_g000016
rosa_roxburghii	Rroxscaffold_4G00280170
rosa_rugosa	Rorug01G0412000 Rorug01G0412100
rosa_samantha	Rh1AG434600 Rh1BG392400 Rh1CG405000 Rh1DG423200
rosa_wichuraiana	Rw1G037990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	886
AccB7I	CCANNNNNTGG	1 cut(s)	392
AclWI	GGATC	1 cut(s)	299
AcoI	YGGCCR	1 cut(s)	867
AcsI	RAATTY	1 cut(s)	1125
AcuI	CTGAAG	1 cut(s)	555
AcyI	GRCGYC	1 cut(s)	887
AfaI	GTAC	3 cut(s)	259, 662, 1034
AfiI	CCNNNNNNNGG	2 cut(s)	379, 392
AflII	CTTAAG	1 cut(s)	374
AgsI	TTSAA	5 cut(s)	77, 95, 349, 409, 973
AjnI	CCWGG	1 cut(s)	578
AluBI	AGCT	4 cut(s)	398, 559, 612, 1098
AluI	AGCT	4 cut(s)	398, 559, 612, 1098
Alw21I	GWGCWC	1 cut(s)	614
Alw26I	GTCTC	2 cut(s)	470, 900
AlwI	GGATC	1 cut(s)	299
AoxI	GGCC	1 cut(s)	867
ApeKI	GCWGC	2 cut(s)	922, 925
ApoI	RAATTY	1 cut(s)	1125
ArsI	GACNNNNNNTTYG	2 cut(s)	104, 136
AspLEI	GCGC	1 cut(s)	889
AsuHPI	GGTGA	3 cut(s)	553, 730, 907
BaeI	ACNNNNGTAYC	4 cut(s)	644, 644, 677, 677
BanI	GGYRCC	1 cut(s)	886
BanII	GRGCYC	2 cut(s)	342, 614
BbsI	GAAGAC	2 cut(s)	117, 624
Bbv12I	GWGCWC	1 cut(s)	614
BbvI	GCAGC	2 cut(s)	909, 937
BccI	CCATC	3 cut(s)	466, 871, 926
BcgI	CGANNNNNNTGC	2 cut(s)	493, 527
BciT130I	CCWGG	1 cut(s)	580
BcoDI	GTCTC	2 cut(s)	470, 900
BfaI	CTAG	1 cut(s)	978
BfmI	CTRYAG	1 cut(s)	923
BfoI	RGCGCY	1 cut(s)	890
BfrI	CTTAAG	1 cut(s)	374
BisI	GCNGC	2 cut(s)	923, 926
BlsI	GCNGC	2 cut(s)	924, 927
Bme1390I	CCNGG	1 cut(s)	580
BmiI	GGNNCC	2 cut(s)	384, 888
BmrFI	CCNGG	1 cut(s)	580
BmsI	GCATC	1 cut(s)	175
BpiI	GAAGAC	2 cut(s)	117, 624
BplI	GAGNNNNNCTC	2 cut(s)	623, 655
BpuEI	CTTGAG	1 cut(s)	5
BsaHI	GRCGYC	1 cut(s)	887
BsaI	GGTCTC	1 cut(s)	470
BsaXI	ACNNNNNCTCC	2 cut(s)	29, 59
Bsc4I	CCNNNNNNNGG	2 cut(s)	379, 392
Bse118I	RCCGGY	2 cut(s)	251, 772
Bse1I	ACTGG	1 cut(s)	1008
Bse3DI	GCAATG	2 cut(s)	51, 955
BseBI	CCWGG	1 cut(s)	580
BseGI	GGATG	1 cut(s)	1019
BseLI	CCNNNNNNNGG	2 cut(s)	379, 392
BseMI	GCAATG	2 cut(s)	51, 955
BseMII	CTCAG	3 cut(s)	252, 368, 627
BseNI	ACTGG	1 cut(s)	1008
BseXI	GCAGC	2 cut(s)	909, 937
BseYI	CCCAGC	1 cut(s)	192
BsgI	GTGCAG	1 cut(s)	727
BshFI	GGCC	1 cut(s)	869
BshNI	GGYRCC	1 cut(s)	886
BsiHKAI	GWGCWC	1 cut(s)	614
BsiSI	CCGG	3 cut(s)	252, 773, 825
BslFI	GGGAC	1 cut(s)	343
BslI	CCNNNNNNNGG	2 cut(s)	379, 392
BsmAI	GTCTC	2 cut(s)	470, 900
BsmBI	CGTCTC	1 cut(s)	900
BsmFI	GGGAC	1 cut(s)	343
BsnI	GGCC	1 cut(s)	869
Bso31I	GGTCTC	1 cut(s)	470
Bsp1286I	GDGCHC	2 cut(s)	342, 614
Bsp143I	GATC	3 cut(s)	304, 965, 1085
BspANI	GGCC	1 cut(s)	869
BspCNI	CTCAG	3 cut(s)	251, 367, 626
BspHI	TCATGA	1 cut(s)	147
BspLI	GGNNCC	2 cut(s)	384, 888
BspMAI	CTGCAG	1 cut(s)	927
BspPI	GGATC	1 cut(s)	299
BspQI	GCTCTTC	1 cut(s)	851
BspT107I	GGYRCC	1 cut(s)	886
BspTI	CTTAAG	1 cut(s)	374
BspTNI	GGTCTC	1 cut(s)	470
BsrDI	GCAATG	2 cut(s)	51, 955
BsrFI	RCCGGY	2 cut(s)	251, 772
BsrI	ACTGG	1 cut(s)	1008
BssAI	RCCGGY	2 cut(s)	251, 772
BssMI	GATC	3 cut(s)	304, 965, 1085
BssNI	GRCGYC	1 cut(s)	887
Bst2UI	CCWGG	1 cut(s)	580
Bst4CI	ACNGT	2 cut(s)	575, 1062
Bst6I	CTCTTC	2 cut(s)	515, 851
BstACI	GRCGYC	1 cut(s)	887
BstAFI	CTTAAG	1 cut(s)	374
BstC8I	GCNNGC	3 cut(s)	175, 253, 596
BstDEI	CTNAG	4 cut(s)	238, 354, 555, 613
BstF5I	GGATG	1 cut(s)	1019
BstH2I	RGCGCY	1 cut(s)	890
BstHHI	GCGC	1 cut(s)	889
BstKTI	GATC	3 cut(s)	307, 968, 1088
BstMAI	GTCTC	2 cut(s)	470, 900
BstMBI	GATC	3 cut(s)	304, 965, 1085
BstMWI	GCNNNNNNNGC	2 cut(s)	248, 501
BstNI	CCWGG	1 cut(s)	580
BstSCI	CCNGG	1 cut(s)	578
BstSFI	CTRYAG	1 cut(s)	923
BstV1I	GCAGC	2 cut(s)	909, 937
BstV2I	GAAGAC	2 cut(s)	117, 624
BstXI	CCANNNNNNTGG	1 cut(s)	877
BsuRI	GGCC	1 cut(s)	869
BtgZI	GCGATG	1 cut(s)	732
BtsCI	GGATG	1 cut(s)	1019
BtsI	GCAGTG	1 cut(s)	715
BtsIMutI	CAGTG	2 cut(s)	715, 1015
Cac8I	GCNNGC	3 cut(s)	175, 253, 596
CciI	TCATGA	1 cut(s)	147
CfoI	GCGC	1 cut(s)	889
Cfr10I	RCCGGY	2 cut(s)	251, 772
Csp6I	GTAC	3 cut(s)	258, 661, 1033
CviAII	CATG	5 cut(s)	86, 148, 403, 929, 1024
CviQI	GTAC	3 cut(s)	258, 661, 1033
DdeI	CTNAG	4 cut(s)	238, 354, 555, 613
DinI	GGCGCC	1 cut(s)	888
DpnI	GATC	3 cut(s)	306, 967, 1087
DpnII	GATC	3 cut(s)	304, 965, 1085
EaeI	YGGCCR	1 cut(s)	867
Eam1104I	CTCTTC	2 cut(s)	515, 851
EarI	CTCTTC	2 cut(s)	515, 851
Ecl136II	GAGCTC	1 cut(s)	612
Eco24I	GRGCYC	2 cut(s)	342, 614
Eco31I	GGTCTC	1 cut(s)	470
Eco53kI	GAGCTC	1 cut(s)	612
Eco57I	CTGAAG	1 cut(s)	555
EcoICRI	GAGCTC	1 cut(s)	612
EcoRII	CCWGG	1 cut(s)	578
EcoT38I	GRGCYC	2 cut(s)	342, 614
EgeI	GGCGCC	1 cut(s)	888
EheI	GGCGCC	1 cut(s)	888
Esp3I	CGTCTC	1 cut(s)	900
FaeI	CATG	5 cut(s)	89, 151, 406, 932, 1027
FaqI	GGGAC	1 cut(s)	343
FatI	CATG	5 cut(s)	85, 147, 402, 928, 1023
Fnu4HI	GCNGC	2 cut(s)	923, 926
FokI	GGATG	1 cut(s)	1006
FriOI	GRGCYC	2 cut(s)	342, 614
Fsp4HI	GCNGC	2 cut(s)	923, 926
FspBI	CTAG	1 cut(s)	978
GlaI	GCGC	1 cut(s)	888
GluI	GCNGC	2 cut(s)	923, 926
GsaI	CCCAGC	1 cut(s)	196
HaeII	RGCGCY	1 cut(s)	890
HaeIII	GGCC	1 cut(s)	869
HapII	CCGG	3 cut(s)	252, 773, 825
HhaI	GCGC	1 cut(s)	889
Hin1I	GRCGYC	1 cut(s)	887
Hin1II	CATG	5 cut(s)	89, 151, 406, 932, 1027
Hin6I	GCGC	1 cut(s)	887
HinP1I	GCGC	1 cut(s)	887
HpaII	CCGG	3 cut(s)	252, 773, 825
HphI	GGTGA	3 cut(s)	553, 730, 907
Hpy188I	TCNGA	3 cut(s)	304, 616, 942
Hpy188III	TCNNGA	4 cut(s)	28, 148, 640, 978
Hpy99I	CGWCG	1 cut(s)	877
HpyAV	CCTTC	8 cut(s)	309, 494, 561, 685, 709, 735, 793, 1103
HpyCH4III	ACNGT	2 cut(s)	575, 1062
HpyCH4V	TGCA	7 cut(s)	56, 177, 188, 708, 925, 960, 1067
HpyF10VI	GCNNNNNNNGC	2 cut(s)	248, 501
HpyF3I	CTNAG	4 cut(s)	238, 354, 555, 613
Hsp92I	GRCGYC	1 cut(s)	887
Hsp92II	CATG	5 cut(s)	89, 151, 406, 932, 1027
HspAI	GCGC	1 cut(s)	887
KasI	GGCGCC	1 cut(s)	886
KroI	GCCGGC	1 cut(s)	251
KroNI	GCCGGC	1 cut(s)	253
Kzo9I	GATC	3 cut(s)	304, 965, 1085
LguI	GCTCTTC	1 cut(s)	851
LmnI	GCTCC	3 cut(s)	388, 395, 1103
Lsp1109I	GCAGC	2 cut(s)	909, 937
LweI	GCATC	1 cut(s)	175
MaeI	CTAG	1 cut(s)	978
MaeIII	GTNAC	1 cut(s)	203
MalI	GATC	3 cut(s)	306, 967, 1087
MboI	GATC	3 cut(s)	304, 965, 1085
MfeI	CAATTG	1 cut(s)	363
MhlI	GDGCHC	2 cut(s)	342, 614
MluCI	AATT	7 cut(s)	131, 309, 363, 754, 828, 973, 1125
Mly113I	GGCGCC	1 cut(s)	887
MlyI	GAGTC	3 cut(s)	107, 467, 614
MnlI	CCTC	9 cut(s)	29, 55, 82, 338, 363, 518, 576, 1000, 1099
MroNI	GCCGGC	1 cut(s)	251
MseI	TTAA	2 cut(s)	134, 375
MslI	CAYNNNNRTG	1 cut(s)	875
MspCI	CTTAAG	1 cut(s)	374
MspI	CCGG	3 cut(s)	252, 773, 825
MspR9I	CCNGG	1 cut(s)	580
MunI	CAATTG	1 cut(s)	363
MvaI	CCWGG	1 cut(s)	580
MwoI	GCNNNNNNNGC	2 cut(s)	248, 501
NaeI	GCCGGC	1 cut(s)	253
NarI	GGCGCC	1 cut(s)	887
NdeII	GATC	3 cut(s)	304, 965, 1085
NgoMIV	GCCGGC	1 cut(s)	251
NlaIII	CATG	5 cut(s)	89, 151, 406, 932, 1027
NlaIV	GGNNCC	2 cut(s)	384, 888
PagI	TCATGA	1 cut(s)	147
PciSI	GCTCTTC	1 cut(s)	851
PcsI	WCGNNNNNNNCGW	1 cut(s)	872
PdiI	GCCGGC	1 cut(s)	253
PfeI	GAWTC	8 cut(s)	215, 636, 911, 937, 983, 1013, 1043, 1073
PflMI	CCANNNNNTGG	1 cut(s)	392
PfoI	TCCNGGA	1 cut(s)	578
PkrI	GCNGC	2 cut(s)	924, 927
PleI	GAGTC	3 cut(s)	107, 466, 614
PluTI	GGCGCC	1 cut(s)	890
PpsI	GAGTC	3 cut(s)	107, 466, 614
Psp124BI	GAGCTC	1 cut(s)	614
Psp6I	CCWGG	1 cut(s)	578
PspFI	CCCAGC	1 cut(s)	192
PspGI	CCWGG	1 cut(s)	578
PspN4I	GGNNCC	2 cut(s)	384, 888
PstI	CTGCAG	1 cut(s)	927
RsaI	GTAC	3 cut(s)	259, 662, 1034
RsaNI	GTAC	3 cut(s)	258, 661, 1033
RseI	CAYNNNNRTG	1 cut(s)	875
SacI	GAGCTC	1 cut(s)	614
SapI	GCTCTTC	1 cut(s)	851
SaqAI	TTAA	2 cut(s)	134, 375
SatI	GCNGC	2 cut(s)	923, 926
Sau3AI	GATC	3 cut(s)	304, 965, 1085
SchI	GAGTC	3 cut(s)	107, 467, 614
ScrFI	CCNGG	1 cut(s)	580
SduI	GDGCHC	2 cut(s)	342, 614
SfaNI	GCATC	1 cut(s)	175
SfcI	CTRYAG	1 cut(s)	923
SfoI	GGCGCC	1 cut(s)	888
SmiMI	CAYNNNNRTG	1 cut(s)	875
SmlI	CTYRAG	2 cut(s)	20, 374
SmoI	CTYRAG	2 cut(s)	20, 374
Sse9I	AATT	7 cut(s)	131, 309, 363, 754, 828, 973, 1125
SspDI	GGCGCC	1 cut(s)	886
SspI	AATATT	2 cut(s)	736, 817
SspMI	CTAG	1 cut(s)	978
SstI	GAGCTC	1 cut(s)	614
StyD4I	CCNGG	1 cut(s)	578
TaaI	ACNGT	2 cut(s)	575, 1062
TaqI	TCGA	2 cut(s)	123, 641
TasI	AATT	7 cut(s)	131, 309, 363, 754, 828, 973, 1125
TfiI	GAWTC	8 cut(s)	215, 636, 911, 937, 983, 1013, 1043, 1073
Tru1I	TTAA	2 cut(s)	134, 375
Tru9I	TTAA	2 cut(s)	134, 375
TscAI	CASTG	2 cut(s)	715, 1015
TseI	GCWGC	2 cut(s)	922, 925
TspDTI	ATGAA	5 cut(s)	164, 391, 704, 1008, 1040
TspGWI	ACGGA	2 cut(s)	603, 916
TspRI	CASTG	2 cut(s)	715, 1015
Van91I	CCANNNNNTGG	1 cut(s)	392
Vha464I	CTTAAG	1 cut(s)	374
XapI	RAATTY	1 cut(s)	1125
XbaI	TCTAGA	1 cut(s)	977
XcmI	CCANNNNNNNNNTGG	1 cut(s)	469
XspI	CTAG	1 cut(s)	978

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.