Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0009504

Physical Location & Seq

Genomic Coordinates Forward (+)

2798343 .. 2801449

Gene Structure 3107 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00280170.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGGAAACTCTGTACTTTCTTAAGTTCTGGAAACCCAATCCTTCTCCCATTGCAATTCCCAGTCCTTTGGTAGAAACAGACAATGAATTTGAGGTGGAAGAGGAGGAAGAAGAAGACTCGTTCTTCGATTTGGAGATTAGTACAGAATCAAACACCAAAACCCATGAAGAAAGTTCCAAGCTTTACTCAAAAGAAGCCAAAACAGAACCAACCCTTTCTGTTCCTCCTCCTCCTTCTGATCCAATTTCCAAAAGGAAAATCCTCCCAATTGAACCCATTTCCAAGCCTCAGTCCCCCATTGCTCTACTCAAATCAGCTCCAAAGTTTGGGGTGTCGATTTTCAAAAAACCCAAATCAGCTCCAACTAAGAAAACAGAGAAAACAGGGGAAACAGAGTCCAGCATTTTGATGGAGACCCAGAAGCAGAAAAAGCCAGAAGCCAAAGGCAATGAAGCTTCAGGCCCTTCTAAGCTGACCAGGGAAAACAGTTCGAGAAAAACTGGAAGGATATTGCAGAGCCAGAGCTCCGATGATTCGAAAACAGAGCGGTTTTCAAAGGATGTGATAAACAAGTACCTGAAGCTAATCAAGCCTCTGTACTTGAAAGTTTCCAAGAGGTACGGTGACAAGGTGAAGGTTTCCGGCGACTTGCCGATGGCATCGCCGACATCGTCGCCGGCGGTGTCTATGTACTCCCCGAGGAAGGAGAGGCAGGGGAATATTCCTGCCGGGATTCGAGTTGTTTGTAAGCATCTTGGGAAGAGCAAGTCGGCCACAGCGGCGATGGCGGTGGTGCCGCCGGTGAACCGGAGAGACGACTCGCTGTTGCTTCAAGCAGATGGGATTCAGAGCGCCATTCTGCATTGCAAGAGATCATTCAATTCTAGAGATTCTTCTTGCCTATCAAGATCAACAAGTTGGACTAGTTCGTCCATGAACTCATATTCTAGTGGCGTAGGATGGAAAACCCTAGCGAGAGCAAAAGCTCTCGACATCAAAGCGCCGCTGATACCAAGTGTCATCAATGGGAGCCCTCAACGCCTCCCTACTCGAGGTCGCTCCAGCGGCCGAGCACAGCGGAGGCCGCTACCCCGCCTCTCAGTTTCAAGCCGTTTTCAAATCAATTTGCTCTCCGATGCGGGGGATCTTCTGCTGCGGTGGTTGATGGCGATGATTGGGATAGGCGACTTCTGGCCACGGCCTAAGCGTGGGCGTATCCGGCGGCGTCCTCAATTCCTGGTGAGTTTGTTTTGGGTCGGGTGGATCTTGGCCTCAATCTTGGGACTGTTACTGCTGGGACAGCTGGCGGTGGCTCAAAACAGTACTAAGCTCAGGTTTTGGTGGCTATGGTGGTTGCACTGGGTTGAGACGGCATTGGAGTTGCGTTCGTTGTTGCTGACAACCATGGAATTTGGTGGCGTTGGTTGGGTGCCCGGCAGATGGGCTGGTCTATTACTGCTGGGGCTGGCGGAGGTGTTTCTGAGAGGCGGTGGGCCTCTGACTTGGTGGCCGGAAAGGTTGAAGACGACATCGCGTGGGAGGTTGCTGCGACGGGTGTCCACATCATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

523

Amino Acids

58.46

Weight (kDa)

10.16

Isoelectric Point (pI)

62.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009504)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52870 AT5G52870
fragaria_vesca	FvH4_7g30580 FvH4_7g30580 FvH4_7g30580
malus_domestica	MD01G1211000.v1.1 MD07G1281700.v1.1 MD07G1281800.v1.1
prunus_persica	Prupe.2G303400_v2.0.a1
pyrus_communis	pycom01g22150 pycom07g25570
rosa_chinensis	RchiOBHm_Chr1g0379481
rosa_laevigata	RLG00000026399
rosa_multiflora	Rmu_sc0006761.1_g000016
rosa_roxburghii	Rroxscaffold_4G00280170
rosa_rugosa	Rorug01G0412000 Rorug01G0412100
rosa_samantha	Rh1AG434600 Rh1BG392400 Rh1CG405000 Rh1DG423200
rosa_wichuraiana	Rw1G037990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	928
AccB1I	GGYRCC	2 cut(s)	793, 1429
AccB7I	CCANNNNNTGG	1 cut(s)	326
AccBSI	CCGCTC	1 cut(s)	547
AccII	CGCG	1 cut(s)	1534
AclWI	GGATC	3 cut(s)	233, 1152, 1271
AcoI	YGGCCR	4 cut(s)	771, 1066, 1193, 1508
AcsI	RAATTY	2 cut(s)	86, 1409
AcuI	CTGAAG	2 cut(s)	441, 599
AcyI	GRCGYC	1 cut(s)	1225
AfaI	GTAC	7 cut(s)	14, 142, 575, 599, 620, 692, 1324
AfiI	CCNNNNNNNGG	6 cut(s)	326, 703, 1052, 1140, 1208, 1440
AflII	CTTAAG	1 cut(s)	20
AgsI	TTSAA	9 cut(s)	272, 343, 555, 604, 833, 880, 1107, 1118, 1522
AhlI	ACTAGT	1 cut(s)	923
AjnI	CCWGG	2 cut(s)	476, 1236
Alw21I	GWGCWC	2 cut(s)	527, 1075
Alw26I	GTCTC	3 cut(s)	407, 807, 1361
AlwI	GGATC	3 cut(s)	233, 1152, 1271
Ama87I	CYCGRG	2 cut(s)	697, 1050
AoxI	GGCC	9 cut(s)	460, 771, 1066, 1082, 1193, 1199, 1269, 1493, 1508
ApeKI	GCWGC	2 cut(s)	1153, 1546
ApoI	RAATTY	2 cut(s)	86, 1409
ArsI	GACNNNNNNTTYG	4 cut(s)	71, 103, 107, 139
AspLEI	GCGC	2 cut(s)	854, 1003
AspS9I	GGNCC	2 cut(s)	461, 1493
AsuC2I	CCSGG	2 cut(s)	730, 1434
AsuHPI	GGTGA	4 cut(s)	635, 643, 814, 1252
AsuII	TTCGAA	1 cut(s)	536
AvaI	CYCGRG	2 cut(s)	697, 1050
BaeGI	GKGCMC	1 cut(s)	1434
BalI	TGGCCA	1 cut(s)	1195
BanI	GGYRCC	2 cut(s)	793, 1429
BanII	GRGCYC	2 cut(s)	527, 1034
BbsI	GAAGAC	2 cut(s)	120, 1529
Bbv12I	GWGCWC	2 cut(s)	527, 1075
BbvI	GCAGC	2 cut(s)	1140, 1533
BccI	CCATC	7 cut(s)	403, 649, 778, 833, 954, 1159, 1434
BceAI	ACGGC	3 cut(s)	1095, 1214, 1386
BciT130I	CCWGG	2 cut(s)	478, 1238
BciVI	GTATCC	1 cut(s)	1226
BcnI	CCSGG	2 cut(s)	730, 1434
BcoDI	GTCTC	3 cut(s)	407, 807, 1361
BcuI	ACTAGT	1 cut(s)	923
BfaI	CTAG	4 cut(s)	885, 924, 948, 971
BfoI	RGCGCY	2 cut(s)	855, 1004
BfrI	CTTAAG	1 cut(s)	20
BfuI	GTATCC	1 cut(s)	1226
BglI	GCCNNNNNGGC	1 cut(s)	779
BisI	GCNGC	8 cut(s)	780, 797, 1004, 1066, 1085, 1154, 1223, 1547
BlsI	GCNGC	8 cut(s)	781, 798, 1005, 1067, 1086, 1155, 1224, 1548
BmcAI	AGTACT	1 cut(s)	1324
Bme1390I	CCNGG	4 cut(s)	478, 730, 1238, 1434
BmeT110I	CYCGRG	2 cut(s)	697, 1050
BmgT120I	GGNCC	2 cut(s)	461, 1493
BmiI	GGNNCC	3 cut(s)	795, 1031, 1431
BmrFI	CCNGG	4 cut(s)	478, 730, 1238, 1434
BmrI	ACTGGG	2 cut(s)	54, 1369
BmsI	GCATC	3 cut(s)	668, 760, 1126
BmuI	ACTGGG	2 cut(s)	54, 1369
BoxI	GACNNNNGTC	1 cut(s)	1555
BpiI	GAAGAC	2 cut(s)	120, 1529
BpmI	CTGGAG	1 cut(s)	1045
Bpu10I	CCTNAGC	2 cut(s)	1203, 1331
Bpu14I	TTCGAA	1 cut(s)	536
BpuMI	CCSGG	2 cut(s)	730, 1434
BsaHI	GRCGYC	1 cut(s)	1225
BsaI	GGTCTC	1 cut(s)	407
BsaJI	CCNNGG	4 cut(s)	477, 698, 1196, 1404
BsaWI	WCCGGW	1 cut(s)	807
Bsc4I	CCNNNNNNNGG	6 cut(s)	326, 703, 1052, 1140, 1208, 1440
Bse118I	RCCGGY	2 cut(s)	676, 799
Bse1I	ACTGG	3 cut(s)	60, 505, 1364
Bse3DI	GCAATG	4 cut(s)	48, 297, 454, 862
BseBI	CCWGG	2 cut(s)	478, 1238
BseDI	CCNNGG	4 cut(s)	477, 698, 1196, 1404
BseGI	GGATG	2 cut(s)	565, 965
BseLI	CCNNNNNNNGG	6 cut(s)	326, 703, 1052, 1140, 1208, 1440
BseMI	GCAATG	4 cut(s)	48, 297, 454, 862
BseMII	CTCAG	4 cut(s)	302, 1113, 1345, 1472
BseNI	ACTGG	3 cut(s)	60, 505, 1364
BseRI	GAGGAG	3 cut(s)	116, 216, 219
BseSI	GKGCMC	1 cut(s)	1434
BseX3I	CGGCCG	1 cut(s)	1066
BseXI	GCAGC	2 cut(s)	1140, 1533
BseYI	CCCAGC	2 cut(s)	1294, 1459
Bsh1236I	CGCG	1 cut(s)	1534
Bsh1285I	CGRYCG	1 cut(s)	1069
BshFI	GGCC	9 cut(s)	462, 773, 1068, 1084, 1195, 1201, 1271, 1495, 1510
BshNI	GGYRCC	2 cut(s)	793, 1429
BsiEI	CGRYCG	1 cut(s)	1069
BsiHKAI	GWGCWC	2 cut(s)	527, 1075
BsiHKCI	CYCGRG	2 cut(s)	697, 1050
BsiSI	CCGG	8 cut(s)	642, 677, 729, 800, 808, 1219, 1434, 1511
BslFI	GGGAC	3 cut(s)	277, 1296, 1311
BslI	CCNNNNNNNGG	6 cut(s)	326, 703, 1052, 1140, 1208, 1440
BsmAI	GTCTC	3 cut(s)	407, 807, 1361
BsmBI	CGTCTC	2 cut(s)	807, 1361
BsmFI	GGGAC	3 cut(s)	277, 1296, 1311
BsnI	GGCC	9 cut(s)	462, 773, 1068, 1084, 1195, 1201, 1271, 1495, 1510
Bso31I	GGTCTC	1 cut(s)	407
BsoBI	CYCGRG	2 cut(s)	697, 1050
Bsp119I	TTCGAA	1 cut(s)	536
Bsp1286I	GDGCHC	4 cut(s)	527, 1034, 1075, 1434
Bsp143I	GATC	5 cut(s)	238, 872, 908, 1144, 1263
Bsp19I	CCATGG	1 cut(s)	1404
BspANI	GGCC	9 cut(s)	462, 773, 1068, 1084, 1195, 1201, 1271, 1495, 1510
BspCNI	CTCAG	4 cut(s)	301, 1112, 1344, 1473
BspFNI	CGCG	1 cut(s)	1534
BspLI	GGNNCC	3 cut(s)	795, 1031, 1431
BspPI	GGATC	3 cut(s)	233, 1152, 1271
BspQI	GCTCTTC	1 cut(s)	755
BspT104I	TTCGAA	1 cut(s)	536
BspT107I	GGYRCC	2 cut(s)	793, 1429
BspTI	CTTAAG	1 cut(s)	20
BspTNI	GGTCTC	1 cut(s)	407
BsrBI	CCGCTC	1 cut(s)	547
BsrDI	GCAATG	4 cut(s)	48, 297, 454, 862
BsrFI	RCCGGY	2 cut(s)	676, 799
BsrI	ACTGG	3 cut(s)	60, 505, 1364
BssAI	RCCGGY	2 cut(s)	676, 799
BssECI	CCNNGG	4 cut(s)	477, 698, 1196, 1404
BssMI	GATC	5 cut(s)	238, 872, 908, 1144, 1263
BssNI	GRCGYC	1 cut(s)	1225
BssT1I	CCWWGG	1 cut(s)	1404
Bst2UI	CCWGG	2 cut(s)	478, 1238
Bst4CI	ACNGT	4 cut(s)	488, 623, 1287, 1322
Bst6I	CTCTTC	2 cut(s)	93, 755
BstACI	GRCGYC	1 cut(s)	1225
BstAFI	CTTAAG	1 cut(s)	20
BstBI	TTCGAA	1 cut(s)	536
BstC8I	GCNNGC	3 cut(s)	678, 1305, 1467
BstDEI	CTNAG	8 cut(s)	288, 366, 468, 1099, 1203, 1326, 1331, 1481
BstDSI	CCRYGG	2 cut(s)	1196, 1404
BstENI	CCTNNNNNAGG	1 cut(s)	1050
BstF5I	GGATG	2 cut(s)	565, 965
BstFNI	CGCG	1 cut(s)	1534
BstH2I	RGCGCY	2 cut(s)	855, 1004
BstHHI	GCGC	2 cut(s)	854, 1003
BstKTI	GATC	5 cut(s)	241, 875, 911, 1147, 1266
BstMAI	GTCTC	3 cut(s)	407, 807, 1361
BstMBI	GATC	5 cut(s)	238, 872, 908, 1144, 1263
BstMCI	CGRYCG	1 cut(s)	1069
BstMWI	GCNNNNNNNGC	9 cut(s)	430, 589, 779, 785, 1038, 1065, 1084, 1219, 1300
BstNI	CCWGG	2 cut(s)	478, 1238
BstPAI	GACNNNNGTC	1 cut(s)	1555
BstSCI	CCNGG	4 cut(s)	476, 728, 1236, 1432
BstSLI	GKGCMC	1 cut(s)	1434
BstUI	CGCG	1 cut(s)	1534
BstV1I	GCAGC	2 cut(s)	1140, 1533
BstV2I	GAAGAC	2 cut(s)	120, 1529
BstX2I	RGATCY	2 cut(s)	1144, 1263
BstXI	CCANNNNNNTGG	1 cut(s)	67
BstYI	RGATCY	2 cut(s)	1144, 1263
BstZI	CGGCCG	1 cut(s)	1066
BsuI	GTATCC	1 cut(s)	1226
BsuRI	GGCC	9 cut(s)	462, 773, 1068, 1084, 1195, 1201, 1271, 1495, 1510
BtgI	CCRYGG	2 cut(s)	1196, 1404
BtgZI	GCGATG	4 cut(s)	645, 797, 1184, 1515
BtsCI	GGATG	2 cut(s)	565, 965
BtsIMutI	CAGTG	1 cut(s)	1357
Cac8I	GCNNGC	3 cut(s)	678, 1305, 1467
CfoI	GCGC	2 cut(s)	854, 1003
Cfr10I	RCCGGY	2 cut(s)	676, 799
Cfr13I	GGNCC	2 cut(s)	461, 1493
CseI	GACGC	1 cut(s)	1214
Csp6I	GTAC	7 cut(s)	13, 141, 574, 598, 619, 691, 1323
CviAII	CATG	3 cut(s)	164, 934, 1405
CviQI	GTAC	7 cut(s)	13, 141, 574, 598, 619, 691, 1323
DdeI	CTNAG	8 cut(s)	288, 366, 468, 1099, 1203, 1326, 1331, 1481
DpnI	GATC	5 cut(s)	240, 874, 910, 1146, 1265
DpnII	GATC	5 cut(s)	238, 872, 908, 1144, 1263
DrdI	GACNNNNNNGTC	1 cut(s)	928
DseDI	GACNNNNNNGTC	1 cut(s)	928
EaeI	YGGCCR	4 cut(s)	771, 1066, 1193, 1508
EagI	CGGCCG	1 cut(s)	1066
Eam1104I	CTCTTC	2 cut(s)	93, 755
EarI	CTCTTC	2 cut(s)	93, 755
EciI	GGCGGA	1 cut(s)	1484
Ecl136II	GAGCTC	1 cut(s)	525
EclXI	CGGCCG	1 cut(s)	1066
Eco130I	CCWWGG	1 cut(s)	1404
Eco24I	GRGCYC	2 cut(s)	527, 1034
Eco31I	GGTCTC	1 cut(s)	407
Eco52I	CGGCCG	1 cut(s)	1066
Eco53kI	GAGCTC	1 cut(s)	525
Eco57I	CTGAAG	2 cut(s)	441, 599
Eco88I	CYCGRG	2 cut(s)	697, 1050
EcoICRI	GAGCTC	1 cut(s)	525
EcoNI	CCTNNNNNAGG	1 cut(s)	1050
EcoO109I	RGGNCCY	1 cut(s)	461
EcoRII	CCWGG	2 cut(s)	476, 1236
EcoT14I	CCWWGG	1 cut(s)	1404
EcoT38I	GRGCYC	2 cut(s)	527, 1034
ErhI	CCWWGG	1 cut(s)	1404
Esp3I	CGTCTC	2 cut(s)	807, 1361
FaeI	CATG	3 cut(s)	167, 937, 1408
FaiI	YATR	6 cut(s)	165, 689, 935, 943, 1348, 1406
FaqI	GGGAC	3 cut(s)	277, 1296, 1311
FatI	CATG	3 cut(s)	163, 933, 1404
FauI	CCCGC	2 cut(s)	1100, 1132
Fnu4HI	GCNGC	8 cut(s)	780, 797, 1004, 1066, 1085, 1154, 1223, 1547
FokI	GGATG	2 cut(s)	572, 972
FriOI	GRGCYC	2 cut(s)	527, 1034
Fsp4HI	GCNGC	8 cut(s)	780, 797, 1004, 1066, 1085, 1154, 1223, 1547
FspBI	CTAG	4 cut(s)	885, 924, 948, 971
GlaI	GCGC	2 cut(s)	853, 1002
GluI	GCNGC	8 cut(s)	780, 797, 1004, 1066, 1085, 1154, 1223, 1547
GsaI	CCCAGC	2 cut(s)	1298, 1463
GsuI	CTGGAG	1 cut(s)	1045
HaeII	RGCGCY	2 cut(s)	855, 1004
HaeIII	GGCC	9 cut(s)	462, 773, 1068, 1084, 1195, 1201, 1271, 1495, 1510
HapII	CCGG	8 cut(s)	642, 677, 729, 800, 808, 1219, 1434, 1511
HgaI	GACGC	1 cut(s)	1214
HhaI	GCGC	2 cut(s)	854, 1003
Hin1I	GRCGYC	1 cut(s)	1225
Hin1II	CATG	3 cut(s)	167, 937, 1408
Hin6I	GCGC	2 cut(s)	852, 1001
HinP1I	GCGC	2 cut(s)	852, 1001
HindIII	AAGCTT	2 cut(s)	179, 453
HinfI	GANTC	8 cut(s)	116, 146, 395, 533, 733, 818, 844, 890
HpaII	CCGG	8 cut(s)	642, 677, 729, 800, 808, 1219, 1434, 1511
HphI	GGTGA	4 cut(s)	635, 643, 814, 1252
Hpy166II	GTNNAC	2 cut(s)	805, 1560
Hpy188I	TCNGA	6 cut(s)	238, 529, 849, 1135, 1482, 1500
Hpy188III	TCNNGA	5 cut(s)	28, 492, 885, 906, 989
Hpy8I	GTNNAC	2 cut(s)	805, 1560
Hpy99I	CGWCG	2 cut(s)	676, 1554
HpyAV	CCTTC	6 cut(s)	51, 243, 474, 498, 628, 697
HpyCH4III	ACNGT	4 cut(s)	488, 623, 1287, 1322
HpyCH4V	TGCA	5 cut(s)	53, 514, 862, 867, 1357
HpyF10VI	GCNNNNNNNGC	9 cut(s)	430, 589, 779, 785, 1038, 1065, 1084, 1219, 1300
HpyF3I	CTNAG	8 cut(s)	288, 366, 468, 1099, 1203, 1326, 1331, 1481
Hsp92I	GRCGYC	1 cut(s)	1225
Hsp92II	CATG	3 cut(s)	167, 937, 1408
HspAI	GCGC	2 cut(s)	852, 1001
KroI	GCCGGC	1 cut(s)	676
KroNI	GCCGGC	1 cut(s)	678
Kzo9I	GATC	5 cut(s)	238, 872, 908, 1144, 1263
LguI	GCTCTTC	1 cut(s)	755
LmnI	GCTCC	5 cut(s)	322, 364, 530, 1029, 1064
Lsp1109I	GCAGC	2 cut(s)	1140, 1533
LweI	GCATC	3 cut(s)	668, 760, 1126
MaeI	CTAG	4 cut(s)	885, 924, 948, 971
MaeIII	GTNAC	2 cut(s)	623, 1287
MalI	GATC	5 cut(s)	240, 874, 910, 1146, 1265
MbiI	CCGCTC	1 cut(s)	547
MboI	GATC	5 cut(s)	238, 872, 908, 1144, 1263
MfeI	CAATTG	1 cut(s)	267
MflI	RGATCY	2 cut(s)	1144, 1263
MhlI	GDGCHC	4 cut(s)	527, 1034, 1075, 1434
MlsI	TGGCCA	1 cut(s)	1195
MluCI	AATT	8 cut(s)	54, 86, 243, 267, 880, 1123, 1232, 1409
MluNI	TGGCCA	1 cut(s)	1195
MlyI	GAGTC	3 cut(s)	110, 404, 812
MmeI	TCCRAC	2 cut(s)	386, 899
Mox20I	TGGCCA	1 cut(s)	1195
MreI	CGCCGGCG	1 cut(s)	676
MroNI	GCCGGC	1 cut(s)	676
MscI	TGGCCA	1 cut(s)	1195
MseI	TTAA	1 cut(s)	21
MslI	CAYNNNNRTG	1 cut(s)	407
Msp20I	TGGCCA	1 cut(s)	1195
MspA1I	CMGCKG	5 cut(s)	779, 1006, 1065, 1078, 1303
MspCI	CTTAAG	1 cut(s)	20
MspI	CCGG	8 cut(s)	642, 677, 729, 800, 808, 1219, 1434, 1511
MspR9I	CCNGG	4 cut(s)	478, 730, 1238, 1434
MunI	CAATTG	1 cut(s)	267
MvaI	CCWGG	2 cut(s)	478, 1238
MvnI	CGCG	1 cut(s)	1534
MwoI	GCNNNNNNNGC	9 cut(s)	430, 589, 779, 785, 1038, 1065, 1084, 1219, 1300
NaeI	GCCGGC	1 cut(s)	678
NciI	CCSGG	2 cut(s)	730, 1434
NcoI	CCATGG	1 cut(s)	1404
NdeII	GATC	5 cut(s)	238, 872, 908, 1144, 1263
NgoMIV	GCCGGC	1 cut(s)	676
NlaIII	CATG	3 cut(s)	167, 937, 1408
NlaIV	GGNNCC	3 cut(s)	795, 1031, 1431
NmeAIII	GCCGAG	1 cut(s)	1094
NmuCI	GTSAC	1 cut(s)	623
NspV	TTCGAA	1 cut(s)	536
PaeR7I	CTCGAG	1 cut(s)	1050
PciSI	GCTCTTC	1 cut(s)	755
PcsI	WCGNNNNNNNCGW	2 cut(s)	668, 1204
PdiI	GCCGGC	1 cut(s)	678
PfeI	GAWTC	5 cut(s)	146, 533, 733, 844, 890
PflFI	GACNNNGTC	1 cut(s)	670
PflMI	CCANNNNNTGG	1 cut(s)	326
PkrI	GCNGC	8 cut(s)	781, 798, 1005, 1067, 1086, 1155, 1224, 1548
PleI	GAGTC	3 cut(s)	110, 403, 812
PpsI	GAGTC	3 cut(s)	110, 403, 812
PshAI	GACNNNNGTC	1 cut(s)	1555
Psp124BI	GAGCTC	1 cut(s)	527
Psp6I	CCWGG	2 cut(s)	476, 1236
PspFI	CCCAGC	2 cut(s)	1294, 1459
PspGI	CCWGG	2 cut(s)	476, 1236
PspN4I	GGNNCC	3 cut(s)	795, 1031, 1431
PspPI	GGNCC	2 cut(s)	461, 1493
PspXI	VCTCGAGB	1 cut(s)	1050
PsuI	RGATCY	2 cut(s)	1144, 1263
PsyI	GACNNNGTC	1 cut(s)	670
PvuII	CAGCTG	1 cut(s)	1303
RsaI	GTAC	7 cut(s)	14, 142, 575, 599, 620, 692, 1324
RsaNI	GTAC	7 cut(s)	13, 141, 574, 598, 619, 691, 1323
RseI	CAYNNNNRTG	1 cut(s)	407
SacI	GAGCTC	1 cut(s)	527
SapI	GCTCTTC	1 cut(s)	755
SaqAI	TTAA	1 cut(s)	21
SatI	GCNGC	8 cut(s)	780, 797, 1004, 1066, 1085, 1154, 1223, 1547
Sau3AI	GATC	5 cut(s)	238, 872, 908, 1144, 1263
Sau96I	GGNCC	2 cut(s)	461, 1493
ScaI	AGTACT	1 cut(s)	1324
SchI	GAGTC	3 cut(s)	110, 404, 812
ScrFI	CCNGG	4 cut(s)	478, 730, 1238, 1434
SduI	GDGCHC	4 cut(s)	527, 1034, 1075, 1434
SfaNI	GCATC	3 cut(s)	668, 760, 1126
Sfr274I	CTCGAG	1 cut(s)	1050
SfuI	TTCGAA	1 cut(s)	536
SgrAI	CRCCGGYG	2 cut(s)	676, 799
SlaI	CTCGAG	1 cut(s)	1050
SmiMI	CAYNNNNRTG	1 cut(s)	407
SmlI	CTYRAG	2 cut(s)	20, 1050
SmoI	CTYRAG	2 cut(s)	20, 1050
SpeI	ACTAGT	1 cut(s)	923
Sse9I	AATT	8 cut(s)	54, 86, 243, 267, 880, 1123, 1232, 1409
SspI	AATATT	1 cut(s)	721
SspMI	CTAG	4 cut(s)	885, 924, 948, 971
SstI	GAGCTC	1 cut(s)	527
StyD4I	CCNGG	4 cut(s)	476, 728, 1236, 1432
StyI	CCWWGG	1 cut(s)	1404
TaaI	ACNGT	4 cut(s)	488, 623, 1287, 1322
TaqI	TCGA	7 cut(s)	126, 335, 491, 536, 736, 990, 1051
TasI	AATT	8 cut(s)	54, 86, 243, 267, 880, 1123, 1232, 1409
TatI	WGTACW	5 cut(s)	12, 140, 597, 690, 1322
TauI	GCSGC	6 cut(s)	782, 799, 1006, 1068, 1087, 1225
TfiI	GAWTC	5 cut(s)	146, 533, 733, 844, 890
Tru1I	TTAA	1 cut(s)	21
Tru9I	TTAA	1 cut(s)	21
TscAI	CASTG	1 cut(s)	1364
TseFI	GTSAC	1 cut(s)	623
TseI	GCWGC	2 cut(s)	1153, 1546
Tsp45I	GTSAC	1 cut(s)	623
TspDTI	ATGAA	4 cut(s)	99, 180, 465, 950
TspRI	CASTG	1 cut(s)	1364
Tth111I	GACNNNGTC	1 cut(s)	670
Van91I	CCANNNNNTGG	1 cut(s)	326
Vha464I	CTTAAG	1 cut(s)	20
XagI	CCTNNNNNAGG	1 cut(s)	1050
XapI	RAATTY	2 cut(s)	86, 1409
XbaI	TCTAGA	1 cut(s)	884
XcmI	CCANNNNNNNNNTGG	2 cut(s)	406, 781
XhoI	CTCGAG	1 cut(s)	1050
XspI	CTAG	4 cut(s)	885, 924, 948, 971
ZrmI	AGTACT	1 cut(s)	1324

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.