Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0004917

Physical Location & Seq

Genomic Coordinates Reverse (-)

3521030 .. 3525335

Gene Structure 4306 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1053000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1458 bp

ATGTCGACATCGGGTACGCCGCAGTTCCGGTACACGCAGACGCCGTCGAAGGTGCTCCACCTCCGCAATCTCCCGTGGGAGTGCGCCGAGGAGGAGCTCATCGAGCTCTGCAAACCTTTCGGCAAGATCGTCAACACCAAGTGTAATGTCGGCGCCAATCGCAATCAGGCCTTCGTCGAATTCGCAGACCTAAACCAGGCCATAAATATGGTTTCGTATTATGCTTCATCCTCGGAGCCTGCCCAGGTCCGTGGTAAAACCGTTTACATTCAGTATTCAAATAGACATGAAATTGTCAACAACAAAAGTCCGGGAGACGTACCCGGAAATGTCTTGTTGGTAACCATCGAGGGTGTTGAAGCCGGCGATGTGAGCATTGATGTTATTCACTTGGTGTTCTCTGCTTTTGGCTTTGTTCACAAGATTGCCACTTTTGAAAAAGCAGCTGGCTTCCAGGCATTGATTCAGTTCAGTGATGCTGGCACTGCATCTATGGCAAGGAATGCGTTGGATGGAAGAAGCATACCCAGGTACTTGCTTCCAGAGCATGTCGGTTCCTGCCACTTACGTATTTCTTATTCGGCACACACTGATCTGAACATCAAGTTCCAGTCTCACCGAAGCAGGGACTATACAAATCCGCTCCTTCCTGTAAATCCTACTGCAATAGAGGGAATTATGCAGCCTACTGTAGGTCCTGATGGAAAGAAGAAAGAGCTGGAGAGTAACGTGCTTCTTGCTTCAATTGAAAATATGCAATATGCTGTCACAGTGGATGTTATTCACACGGTGTTCTCTGCGTTTGGCACTGTCCAAAAAATTGCTATATTCGAGAAGAATGGTCAAACACAAGCATTAGTTCAATACCCTGATCTCAATACAGCAGCAGTTGCCAGAGAAGCTCTAGAGGGACACTGCATTTATGATGGTGGCTATTGTAAGCTTCATCTATCATACTCTCGTCATACTGATCTCAATGTAAAGGCGTATAGCGACAAAAGTAGAGACTATACGATCCCAGATGCTAGTTTGCTTGCGGCGCAACAAGTTTCTGGTTACACTCCTCCTCCTCCTGGTGCTTGGCAGAATCCTCAAGCTGCTCCAATGTACCAAGGCAATGAGTACAGTGGTGCAGCTTCTGTGCAGGCCCAAGCTCCTCCAGGTCCTCCAGGACAACCCTCATCATGGGATCCAGCCATGCAGGCAGGCAGATCAACGTTTGTTTCGGCTCCTAGCACCTTTCCCGGTCAAACATACCAGGCATCATCCGGTCCTGTATATTACTCTGCAGCAATGCCAGCGGGTTCTTCGCCTCTCCAATCAGGTCCAACTGCTTCAGGTATGGGTTCTAGGGGAATGCCTCAGCCAGGGGTTCCACCCAATGCGCGACCTGGTGGTGGTGCTTCATCTCCAGGGGTTCGGCCTCCTGGTGCCTCACCATCGTACTACGGCCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000381 GO:0000932 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006417 GO:0007275 GO:0008150 GO:0009791 GO:0009845 GO:0009889 GO:0010468 GO:0010556 GO:0010608 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032268 GO:0032501 GO:0032502 GO:0032991 GO:0034248 GO:0035770 GO:0036464 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043484 GO:0044424 GO:0044444 GO:0044464 GO:0048024 GO:0048856 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051246 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0090351 GO:1903311 GO:1990904 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 RRM_5

Protein Analysis

486

Amino Acids

51.9

Weight (kDa)

6.64

Isoelectric Point (pI)

45.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	21 - 70	6e-08	RNA recognition motif
RRM_5	PF13893	230 - 326	3.3e-06	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
RRM_8	PF11835	242 - 320	1.7e-07	RRM-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004917)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01150 AT3G01150 AT3G01150 AT3G01150
fragaria_vesca	FvH4_6g48200 FvH4_6g48200 FvH4_6g48200 FvH4_6g48200 FvH4_6g48200 FvH4_6g48200 FvH4_6g48200
malus_domestica	MD00G1125500.v1.1 MD00G1167800.v1.1 MD09G1053000.v1.1
prunus_persica	Prupe.3G265700_v2.0.a1 Prupe.3G265700_v2.0.a1
pyrus_communis	pycom111g04420 pycom17g04840
rosa_chinensis	RchiOBHm_Chr2g0167691
rosa_laevigata	RLG00000021746
rosa_multiflora	Rmu_sc0001970.1_g000017 Rmu_sc0002143.1_g000001
rosa_roxburghii	Rroxscaffold_2G00083330
rosa_rugosa	Rorug02G0531300 Rorug02G0531400
rosa_samantha	Rh2AG600300 Rh2BG610800 Rh2CG581200 Rh2DG623500
rosa_wichuraiana	Rw2G049830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	152, 1430
AccBSI	CCGCTC	1 cut(s)	643
AccI	GTMKAC	1 cut(s)	5
AccII	CGCG	1 cut(s)	1387
AciI	CCGC	5 cut(s)	20, 64, 641, 1037, 1301
AclI	AACGTT	1 cut(s)	1217
AclWI	GGATC	3 cut(s)	1009, 1184, 1197
AcoI	YGGCCR	1 cut(s)	1450
AcsI	RAATTY	1 cut(s)	179
AcuI	CTGAAG	1 cut(s)	1320
AcyI	GRCGYC	2 cut(s)	41, 153
AdeI	CACNNNGTG	3 cut(s)	141, 394, 790
AfaI	GTAC	7 cut(s)	16, 32, 321, 533, 1109, 1124, 1445
AfiI	CCNNNNNNNGG	7 cut(s)	196, 625, 692, 1073, 1185, 1367, 1397
AgsI	TTSAA	6 cut(s)	279, 359, 437, 744, 749, 863
AluBI	AGCT	9 cut(s)	97, 106, 446, 718, 902, 943, 1097, 1136, 1154
AluI	AGCT	9 cut(s)	97, 106, 446, 718, 902, 943, 1097, 1136, 1154
Alw21I	GWGCWC	3 cut(s)	57, 99, 108
Alw26I	GTCTC	3 cut(s)	309, 618, 999
AlwI	GGATC	3 cut(s)	1009, 1184, 1197
AlwNI	CAGNNNCTG	1 cut(s)	1139
AoxI	GGCC	5 cut(s)	168, 198, 1146, 1421, 1450
ApeKI	GCWGC	6 cut(s)	443, 682, 884, 1097, 1133, 1289
ApoI	RAATTY	1 cut(s)	179
AspLEI	GCGC	4 cut(s)	86, 155, 1042, 1387
AspS9I	GGNCC	6 cut(s)	247, 695, 1147, 1163, 1271, 1325
AsuC2I	CCSGG	3 cut(s)	312, 324, 1245
AsuHPI	GGTGA	2 cut(s)	608, 1428
AvaII	GGWCC	5 cut(s)	247, 695, 1163, 1271, 1325
BamHI	GGATCC	1 cut(s)	1189
BanI	GGYRCC	2 cut(s)	152, 1430
BanII	GRGCYC	2 cut(s)	99, 108
Bbv12I	GWGCWC	3 cut(s)	57, 99, 108
BbvCI	CCTCAGC	1 cut(s)	1362
BbvI	GCAGC	6 cut(s)	455, 694, 896, 1084, 1145, 1301
BccI	CCATC	5 cut(s)	353, 506, 695, 920, 1447
BceAI	ACGGC	1 cut(s)	28
BcgI	CGANNNNNNTGC	2 cut(s)	100, 134
BcnI	CCSGG	3 cut(s)	312, 324, 1245
BcoDI	GTCTC	3 cut(s)	309, 618, 999
BfaI	CTAG	4 cut(s)	905, 1026, 1233, 1350
BfmI	CTRYAG	2 cut(s)	690, 1287
BfoI	RGCGCY	1 cut(s)	156
BglI	GCCNNNNNGGC	1 cut(s)	1202
BisI	GCNGC	8 cut(s)	20, 444, 683, 885, 1038, 1098, 1134, 1290
BlsI	GCNGC	8 cut(s)	21, 445, 684, 886, 1039, 1099, 1135, 1291
Bme18I	GGWCC	5 cut(s)	247, 695, 1163, 1271, 1325
BmgT120I	GGNCC	6 cut(s)	247, 695, 1147, 1163, 1271, 1325
BmiI	GGNNCC	7 cut(s)	154, 237, 556, 1191, 1230, 1374, 1432
BmsI	GCATC	4 cut(s)	466, 497, 1012, 1271
BpmI	CTGGAG	4 cut(s)	740, 1143, 1152, 1395
Bpu10I	CCTNAGC	1 cut(s)	1362
BpuEI	CTTGAG	1 cut(s)	1077
BpuMI	CCSGG	3 cut(s)	312, 324, 1245
BsaAI	YACGTR	1 cut(s)	569
BsaHI	GRCGYC	2 cut(s)	41, 153
BsaJI	CCNNGG	9 cut(s)	74, 87, 231, 243, 250, 527, 1111, 1367, 1412
BsaWI	WCCGGW	2 cut(s)	27, 1268
BsaXI	ACNNNNNCTCC	2 cut(s)	1051, 1081
Bsc4I	CCNNNNNNNGG	7 cut(s)	196, 625, 692, 1073, 1185, 1367, 1397
Bse118I	RCCGGY	1 cut(s)	362
Bse1I	ACTGG	1 cut(s)	610
Bse3DI	GCAATG	2 cut(s)	1123, 1299
BseDI	CCNNGG	9 cut(s)	74, 87, 231, 243, 250, 527, 1111, 1367, 1412
BseGI	GGATG	4 cut(s)	227, 517, 781, 1265
BseLI	CCNNNNNNNGG	7 cut(s)	196, 625, 692, 1073, 1185, 1367, 1397
BseMI	GCAATG	2 cut(s)	1123, 1299
BseMII	CTCAG	1 cut(s)	1376
BseNI	ACTGG	1 cut(s)	610
BseRI	GAGGAG	6 cut(s)	104, 107, 1053, 1056, 1059, 1146
BseXI	GCAGC	6 cut(s)	455, 694, 896, 1084, 1145, 1301
BsgI	GTGCAG	2 cut(s)	1152, 1163
Bsh1236I	CGCG	1 cut(s)	1387
BshFI	GGCC	5 cut(s)	170, 200, 1148, 1423, 1452
BshNI	GGYRCC	2 cut(s)	152, 1430
BsiHKAI	GWGCWC	3 cut(s)	57, 99, 108
BsiSI	CCGG	6 cut(s)	28, 311, 324, 363, 1245, 1269
BslFI	GGGAC	2 cut(s)	641, 924
BslI	CCNNNNNNNGG	7 cut(s)	196, 625, 692, 1073, 1185, 1367, 1397
BsmAI	GTCTC	3 cut(s)	309, 618, 999
BsmBI	CGTCTC	1 cut(s)	309
BsmFI	GGGAC	2 cut(s)	641, 924
BsmI	GAATGC	2 cut(s)	508, 1362
BsnI	GGCC	5 cut(s)	170, 200, 1148, 1423, 1452
Bsp1286I	GDGCHC	3 cut(s)	57, 99, 108
Bsp143I	GATC	7 cut(s)	126, 592, 871, 970, 1014, 1189, 1211
BspACI	CCGC	5 cut(s)	20, 64, 641, 1037, 1301
BspANI	GGCC	5 cut(s)	170, 200, 1148, 1423, 1452
BspCNI	CTCAG	1 cut(s)	1375
BspFNI	CGCG	1 cut(s)	1387
BspLI	GGNNCC	7 cut(s)	154, 237, 556, 1191, 1230, 1374, 1432
BspMAI	CTGCAG	1 cut(s)	1291
BspPI	GGATC	3 cut(s)	1009, 1184, 1197
BspT107I	GGYRCC	2 cut(s)	152, 1430
BsrBI	CCGCTC	1 cut(s)	643
BsrDI	GCAATG	2 cut(s)	1123, 1299
BsrFI	RCCGGY	1 cut(s)	362
BsrI	ACTGG	1 cut(s)	610
BssAI	RCCGGY	1 cut(s)	362
BssECI	CCNNGG	9 cut(s)	74, 87, 231, 243, 250, 527, 1111, 1367, 1412
BssMI	GATC	7 cut(s)	126, 592, 871, 970, 1014, 1189, 1211
BssNI	GRCGYC	2 cut(s)	41, 153
BssT1I	CCWWGG	1 cut(s)	1111
Bst4CI	ACNGT	6 cut(s)	262, 691, 772, 790, 811, 1127
BstACI	GRCGYC	2 cut(s)	41, 153
BstAPI	GCANNNNNTGC	2 cut(s)	503, 890
BstBAI	YACGTR	1 cut(s)	569
BstC8I	GCNNGC	9 cut(s)	240, 364, 448, 481, 1035, 1146, 1203, 1207, 1299
BstDEI	CTNAG	1 cut(s)	1362
BstDSI	CCRYGG	2 cut(s)	74, 250
BstEII	GGTNACC	1 cut(s)	340
BstENI	CCTNNNNNAGG	3 cut(s)	194, 690, 1365
BstF5I	GGATG	4 cut(s)	227, 517, 781, 1265
BstFNI	CGCG	1 cut(s)	1387
BstH2I	RGCGCY	1 cut(s)	156
BstHHI	GCGC	4 cut(s)	86, 155, 1042, 1387
BstKTI	GATC	7 cut(s)	129, 595, 874, 973, 1017, 1192, 1214
BstMAI	GTCTC	3 cut(s)	309, 618, 999
BstMBI	GATC	7 cut(s)	126, 592, 871, 970, 1014, 1189, 1211
BstNSI	RCATGY	1 cut(s)	551
BstPI	GGTNACC	1 cut(s)	340
BstSFI	CTRYAG	2 cut(s)	690, 1287
BstSNI	TACGTA	1 cut(s)	569
BstUI	CGCG	1 cut(s)	1387
BstV1I	GCAGC	6 cut(s)	455, 694, 896, 1084, 1145, 1301
BstX2I	RGATCY	1 cut(s)	1189
BstXI	CCANNNNNNTGG	2 cut(s)	208, 251
BstYI	RGATCY	1 cut(s)	1189
BsuRI	GGCC	5 cut(s)	170, 200, 1148, 1423, 1452
BtgI	CCRYGG	2 cut(s)	74, 250
BtgZI	GCGATG	1 cut(s)	381
BtsCI	GGATG	4 cut(s)	227, 517, 781, 1265
BtsI	GCAGTG	2 cut(s)	483, 913
BtsIMutI	CAGTG	7 cut(s)	478, 483, 588, 777, 807, 913, 1132
Cac8I	GCNNGC	9 cut(s)	240, 364, 448, 481, 1035, 1146, 1203, 1207, 1299
CaiI	CAGNNNCTG	1 cut(s)	1139
CfoI	GCGC	4 cut(s)	86, 155, 1042, 1387
Cfr10I	RCCGGY	1 cut(s)	362
Cfr13I	GGNCC	6 cut(s)	247, 695, 1147, 1163, 1271, 1325
CseI	GACGC	1 cut(s)	49
CsiI	ACCWGGT	1 cut(s)	1390
Csp6I	GTAC	7 cut(s)	15, 31, 320, 532, 1108, 1123, 1444
CviAII	CATG	4 cut(s)	287, 548, 1185, 1198
CviQI	GTAC	7 cut(s)	15, 31, 320, 532, 1108, 1123, 1444
DdeI	CTNAG	1 cut(s)	1362
DinI	GGCGCC	1 cut(s)	154
DpnI	GATC	7 cut(s)	128, 594, 873, 972, 1016, 1191, 1213
DpnII	GATC	7 cut(s)	126, 592, 871, 970, 1014, 1189, 1211
DraIII	CACNNNGTG	3 cut(s)	141, 394, 790
EaeI	YGGCCR	1 cut(s)	1450
Ecl136II	GAGCTC	2 cut(s)	97, 106
Eco105I	TACGTA	1 cut(s)	569
Eco130I	CCWWGG	1 cut(s)	1111
Eco147I	AGGCCT	1 cut(s)	170
Eco24I	GRGCYC	2 cut(s)	99, 108
Eco47I	GGWCC	5 cut(s)	247, 695, 1163, 1271, 1325
Eco53kI	GAGCTC	2 cut(s)	97, 106
Eco57I	CTGAAG	1 cut(s)	1320
Eco91I	GGTNACC	1 cut(s)	340
EcoICRI	GAGCTC	2 cut(s)	97, 106
EcoNI	CCTNNNNNAGG	3 cut(s)	194, 690, 1365
EcoO109I	RGGNCCY	2 cut(s)	695, 1163
EcoO65I	GGTNACC	1 cut(s)	340
EcoRI	GAATTC	1 cut(s)	179
EcoT14I	CCWWGG	1 cut(s)	1111
EcoT38I	GRGCYC	2 cut(s)	99, 108
EgeI	GGCGCC	1 cut(s)	154
EheI	GGCGCC	1 cut(s)	154
ErhI	CCWWGG	1 cut(s)	1111
Esp3I	CGTCTC	1 cut(s)	309
FaeI	CATG	4 cut(s)	290, 551, 1188, 1201
FaqI	GGGAC	2 cut(s)	641, 924
FatI	CATG	4 cut(s)	286, 547, 1184, 1197
FauI	CCCGC	1 cut(s)	1294
FblI	GTMKAC	1 cut(s)	5
Fnu4HI	GCNGC	8 cut(s)	20, 444, 683, 885, 1038, 1098, 1134, 1290
FokI	GGATG	4 cut(s)	214, 524, 788, 1252
FriOI	GRGCYC	2 cut(s)	99, 108
Fsp4HI	GCNGC	8 cut(s)	20, 444, 683, 885, 1038, 1098, 1134, 1290
FspBI	CTAG	4 cut(s)	905, 1026, 1233, 1350
GlaI	GCGC	4 cut(s)	85, 154, 1041, 1386
GluI	GCNGC	8 cut(s)	20, 444, 683, 885, 1038, 1098, 1134, 1290
GsuI	CTGGAG	4 cut(s)	740, 1143, 1152, 1395
HaeII	RGCGCY	1 cut(s)	156
HaeIII	GGCC	5 cut(s)	170, 200, 1148, 1423, 1452
HapII	CCGG	6 cut(s)	28, 311, 324, 363, 1245, 1269
HgaI	GACGC	1 cut(s)	49
HhaI	GCGC	4 cut(s)	86, 155, 1042, 1387
Hin1I	GRCGYC	2 cut(s)	41, 153
Hin1II	CATG	4 cut(s)	290, 551, 1188, 1201
Hin6I	GCGC	4 cut(s)	84, 153, 1040, 1385
HinP1I	GCGC	4 cut(s)	84, 153, 1040, 1385
HincII	GTYRAC	3 cut(s)	6, 133, 298
HindII	GTYRAC	3 cut(s)	6, 133, 298
HindIII	AAGCTT	1 cut(s)	941
HinfI	GANTC	2 cut(s)	463, 1087
HpaII	CCGG	6 cut(s)	28, 311, 324, 363, 1245, 1269
HphI	GGTGA	2 cut(s)	608, 1428
Hpy166II	GTNNAC	6 cut(s)	6, 33, 133, 265, 298, 418
Hpy188I	TCNGA	2 cut(s)	235, 597
Hpy188III	TCNNGA	4 cut(s)	542, 698, 832, 905
Hpy8I	GTNNAC	6 cut(s)	6, 33, 133, 265, 298, 418
Hpy99I	CGWCG	2 cut(s)	49, 179
HpyAV	CCTTC	3 cut(s)	43, 181, 656
HpyCH4III	ACNGT	6 cut(s)	262, 691, 772, 790, 811, 1127
HpyCH4IV	ACGT	4 cut(s)	318, 568, 729, 1217
HpyF3I	CTNAG	1 cut(s)	1362
HpySE526I	ACGT	4 cut(s)	318, 568, 729, 1217
Hsp92I	GRCGYC	2 cut(s)	41, 153
Hsp92II	CATG	4 cut(s)	290, 551, 1188, 1201
HspAI	GCGC	4 cut(s)	84, 153, 1040, 1385
KasI	GGCGCC	1 cut(s)	152
KroI	GCCGGC	1 cut(s)	362
KroNI	GCCGGC	1 cut(s)	364
Kzo9I	GATC	7 cut(s)	126, 592, 871, 970, 1014, 1189, 1211
LmnI	GCTCC	7 cut(s)	60, 94, 235, 648, 1105, 1159, 1234
Lsp1109I	GCAGC	6 cut(s)	455, 694, 896, 1084, 1145, 1301
LweI	GCATC	4 cut(s)	466, 497, 1012, 1271
MabI	ACCWGGT	1 cut(s)	1390
MaeI	CTAG	4 cut(s)	905, 1026, 1233, 1350
MaeII	ACGT	4 cut(s)	318, 568, 729, 1217
MaeIII	GTNAC	4 cut(s)	340, 725, 766, 1055
MalI	GATC	7 cut(s)	128, 594, 873, 972, 1016, 1191, 1213
MbiI	CCGCTC	1 cut(s)	643
MboI	GATC	7 cut(s)	126, 592, 871, 970, 1014, 1189, 1211
MboII	GAAGA	4 cut(s)	528, 721, 847, 1299
MfeI	CAATTG	1 cut(s)	744
MflI	RGATCY	1 cut(s)	1189
MhlI	GDGCHC	3 cut(s)	57, 99, 108
MluCI	AATT	5 cut(s)	179, 291, 675, 744, 819
Mly113I	GGCGCC	1 cut(s)	153
MmeI	TCCRAC	2 cut(s)	489, 1352
MroNI	GCCGGC	1 cut(s)	362
MslI	CAYNNNNRTG	1 cut(s)	206
MspA1I	CMGCKG	2 cut(s)	446, 1301
MspI	CCGG	6 cut(s)	28, 311, 324, 363, 1245, 1269
MunI	CAATTG	1 cut(s)	744
Mva1269I	GAATGC	2 cut(s)	508, 1362
MvnI	CGCG	1 cut(s)	1387
NaeI	GCCGGC	1 cut(s)	364
NarI	GGCGCC	1 cut(s)	153
NciI	CCSGG	3 cut(s)	312, 324, 1245
NdeII	GATC	7 cut(s)	126, 592, 871, 970, 1014, 1189, 1211
NgoMIV	GCCGGC	1 cut(s)	362
NlaIII	CATG	4 cut(s)	290, 551, 1188, 1201
NlaIV	GGNNCC	7 cut(s)	154, 237, 556, 1191, 1230, 1374, 1432
NmeAIII	GCCGAG	1 cut(s)	112
NmuCI	GTSAC	1 cut(s)	766
NspI	RCATGY	1 cut(s)	551
PceI	AGGCCT	1 cut(s)	170
PcsI	WCGNNNNNNNCGW	2 cut(s)	41, 126
PctI	GAATGC	2 cut(s)	508, 1362
PdiI	GCCGGC	1 cut(s)	364
PfeI	GAWTC	2 cut(s)	463, 1087
PflFI	GACNNNGTC	1 cut(s)	43
PfoI	TCCNGGA	2 cut(s)	310, 1168
PkrI	GCNGC	8 cut(s)	21, 445, 684, 886, 1039, 1099, 1135, 1291
PluTI	GGCGCC	1 cut(s)	156
Ppu21I	YACGTR	1 cut(s)	569
PpuMI	RGGWCCY	2 cut(s)	695, 1163
Psp124BI	GAGCTC	2 cut(s)	99, 108
Psp1406I	AACGTT	1 cut(s)	1217
Psp5II	RGGWCCY	2 cut(s)	695, 1163
PspEI	GGTNACC	1 cut(s)	340
PspN4I	GGNNCC	7 cut(s)	154, 237, 556, 1191, 1230, 1374, 1432
PspPI	GGNCC	6 cut(s)	247, 695, 1147, 1163, 1271, 1325
PspPPI	RGGWCCY	2 cut(s)	695, 1163
PstI	CTGCAG	1 cut(s)	1291
PstNI	CAGNNNCTG	1 cut(s)	1139
PsuI	RGATCY	1 cut(s)	1189
PsyI	GACNNNGTC	1 cut(s)	43
PvuII	CAGCTG	1 cut(s)	446
RsaI	GTAC	7 cut(s)	16, 32, 321, 533, 1109, 1124, 1445
RsaNI	GTAC	7 cut(s)	15, 31, 320, 532, 1108, 1123, 1444
RseI	CAYNNNNRTG	1 cut(s)	206
SacI	GAGCTC	2 cut(s)	99, 108
SalI	GTCGAC	1 cut(s)	4
SatI	GCNGC	8 cut(s)	20, 444, 683, 885, 1038, 1098, 1134, 1290
Sau3AI	GATC	7 cut(s)	126, 592, 871, 970, 1014, 1189, 1211
Sau96I	GGNCC	6 cut(s)	247, 695, 1147, 1163, 1271, 1325
SduI	GDGCHC	3 cut(s)	57, 99, 108
SexAI	ACCWGGT	1 cut(s)	1390
SfaNI	GCATC	4 cut(s)	466, 497, 1012, 1271
SfcI	CTRYAG	2 cut(s)	690, 1287
SfoI	GGCGCC	1 cut(s)	154
SinI	GGWCC	5 cut(s)	247, 695, 1163, 1271, 1325
SmiMI	CAYNNNNRTG	1 cut(s)	206
SmlI	CTYRAG	1 cut(s)	1092
SmoI	CTYRAG	1 cut(s)	1092
SnaBI	TACGTA	1 cut(s)	569
Sse9I	AATT	5 cut(s)	179, 291, 675, 744, 819
SseBI	AGGCCT	1 cut(s)	170
SsiI	CCGC	5 cut(s)	20, 64, 641, 1037, 1301
SspDI	GGCGCC	1 cut(s)	152
SspMI	CTAG	4 cut(s)	905, 1026, 1233, 1350
SstI	GAGCTC	2 cut(s)	99, 108
StuI	AGGCCT	1 cut(s)	170
StyI	CCWWGG	1 cut(s)	1111
TaaI	ACNGT	6 cut(s)	262, 691, 772, 790, 811, 1127
TaiI	ACGT	4 cut(s)	321, 571, 732, 1220
TaqI	TCGA	6 cut(s)	5, 47, 102, 177, 348, 831
TasI	AATT	5 cut(s)	179, 291, 675, 744, 819
TatI	WGTACW	1 cut(s)	1122
TauI	GCSGC	2 cut(s)	22, 1040
TfiI	GAWTC	2 cut(s)	463, 1087
TscAI	CASTG	7 cut(s)	478, 490, 595, 777, 814, 920, 1132
TseFI	GTSAC	1 cut(s)	766
TseI	GCWGC	6 cut(s)	443, 682, 884, 1097, 1133, 1289
Tsp45I	GTSAC	1 cut(s)	766
TspDTI	ATGAA	4 cut(s)	216, 303, 935, 1395
TspGWI	ACGGA	1 cut(s)	239
TspRI	CASTG	7 cut(s)	478, 490, 595, 777, 814, 920, 1132
Tth111I	GACNNNGTC	1 cut(s)	43
VpaK11BI	GGWCC	5 cut(s)	247, 695, 1163, 1271, 1325
XagI	CCTNNNNNAGG	3 cut(s)	194, 690, 1365
XapI	RAATTY	1 cut(s)	179
XbaI	TCTAGA	1 cut(s)	904
XceI	RCATGY	1 cut(s)	551
XmiI	GTMKAC	1 cut(s)	5
XspI	CTAG	4 cut(s)	905, 1026, 1233, 1350

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.