Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0004917

Physical Location & Seq

Genomic Coordinates Reverse (-)

5974503 .. 5978998

Gene Structure 4496 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00083330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1479 bp

ATGTCGACCTCGGGGACGCCGCAGTTCAGGTACACGCAGACGCCGTCGAAGGTGCTCCACCTCCGCAATCTCCCCTGGGAGTGCGCCGAGGAGGAGCTCATCGAGCTCTGCAAGCATTTTGGGAAGATCGTCAATACTAAGTGCAACGTCGGCGCCAATCGCAACCAGGCCTTCGTCGAATTCGCAGACCTAAACCAGGCCATAAACATGGTTTCATATTATGCTTCATCGTCAGAGCCTGCTCAGGTCCGGGGTAAAACAGTTTACATCCAGTATTCAAATAGACACGAAATTGTGAACAACAAAAGCCCTGGAGATGTTCCTGGGAATGTGTTGCTGGTAACCATCGAGGGTGTTGAAGCTGGTGATGTGAGCATTGATGTCATTCACTTGGTGTTTTCTGCTTTTGGGTTTGTGCACAAGATTGCTACTTTCGAAAAGGCTGCAGGCTTCCAGGCATTGATTCAGTTCAGTGATGCTGACACTGCATCTGCGGCTAGGAATGCCTTGGATGGAAGAAGTATACCCAGGTACTTGCTTCCTGAGCATGTCGGTTCATGCCACTTGCGTATCTCGTATTCTGCACACACTGATCTGAACATCAAGTTCCAGTCACACAGAAGCAGGTATCAGCTGGAACATATTGCTGTAAACTTTAACATGGCATCTTTTATGGATTATACAAATCCATACCTTCCTGTAAATCCTACTGCAATAGAGGGAGTTGTGCAGCCTGCAGTAGGTCCTGATGGAAAGAAGAAAGAGATGGAGAGTAATGTGCTTCTGGCTTCCATTGAAAATATGCAGTATGCTGTCACTGTGGATGTTCTTCACACGGTATTTTCAGCGTTTGGCACAGTACAAAAAATTGCTATATTCGAGAAGAATGGTCAAACACAGGCATTAGTTCAATACCCTGATATTGCTACCGCAGCTGTTGCCAGAGAAGCTCTAGAGGGGCACTGCATATATGATGGTGGCTATTGTAAGCTTCATCTATCATACTCTCGTCATACTGATCTCAATGTAAAGGCTTACAGTGACAAAAGTAGAGATTATACAATCCCAGATGCTAGTTTGCTTGCGGTGCAATCTGGCTACCCTGCAGCTCCTGCAGCCTGGCAGAATGCACAGGCTGCTCCAGTGTACCATGGAAATGAATACAGTGCTGCAGCAGCTGGACCGGGTCAAGGTCCTCCTGGACAAGTGCCATCATGGGATCCAAACATGCAAGCAGGCCGATCATCGTTTGTTTCGGTTCCTAGCACCTTTCCTGGTCAGACATTTCCTACATCATCAGGTGGTCCGGTTTATTCCTCTGCACCAATGCCTGCGGGTTCATCACCGCCAATGACTTCAGGTGTGGATCCAAGGGGAATGCATCAGCCAGGTGCTCCACCGCATGTGCGACCAGGTGGTGCTTCACCCCCAGGCGTTCGACCTCCTGGTGCTTCACCTTCTTATTACGGCCAATCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000381 GO:0000932 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006417 GO:0007275 GO:0008150 GO:0009791 GO:0009845 GO:0009889 GO:0010468 GO:0010556 GO:0010608 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032268 GO:0032501 GO:0032502 GO:0032991 GO:0034248 GO:0035770 GO:0036464 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043484 GO:0044424 GO:0044444 GO:0044464 GO:0048024 GO:0048856 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051246 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0090351 GO:1903311 GO:1990904 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 RRM_5

Protein Analysis

492

Amino Acids

52.92

Weight (kDa)

6.38

Isoelectric Point (pI)

43.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	21 - 70	9e-08	RNA recognition motif
RRM_5	PF13893	245 - 342	5.2e-07	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
RRM_8	PF11835	258 - 336	4.2e-08	RRM-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004917)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01150 AT3G01150 AT3G01150 AT3G01150
fragaria_vesca	FvH4_6g48200 FvH4_6g48200 FvH4_6g48200 FvH4_6g48200 FvH4_6g48200 FvH4_6g48200 FvH4_6g48200
malus_domestica	MD00G1125500.v1.1 MD00G1167800.v1.1 MD09G1053000.v1.1
prunus_persica	Prupe.3G265700_v2.0.a1 Prupe.3G265700_v2.0.a1
pyrus_communis	pycom111g04420 pycom17g04840
rosa_chinensis	RchiOBHm_Chr2g0167691
rosa_laevigata	RLG00000021746
rosa_multiflora	Rmu_sc0001970.1_g000017 Rmu_sc0002143.1_g000001
rosa_roxburghii	Rroxscaffold_2G00083330
rosa_rugosa	Rorug02G0531300 Rorug02G0531400
rosa_samantha	Rh2AG600300 Rh2BG610800 Rh2CG581200 Rh2DG623500
rosa_wichuraiana	Rw2G049830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	615
AccB1I	GGYRCC	1 cut(s)	152
AccI	GTMKAC	2 cut(s)	5, 523
AciI	CCGC	8 cut(s)	20, 64, 494, 930, 1085, 1334, 1346, 1400
AclWI	GGATC	4 cut(s)	1214, 1227, 1361, 1374
AcoI	YGGCCR	1 cut(s)	1468
AcsI	RAATTY	1 cut(s)	179
AcuI	CTGAAG	1 cut(s)	1341
AcyI	GRCGYC	3 cut(s)	17, 41, 153
AdeI	CACNNNGTG	1 cut(s)	394
AfaI	GTAC	4 cut(s)	32, 533, 861, 1148
AfiI	CCNNNNNNNGG	3 cut(s)	196, 740, 1190
AgsI	TTSAA	4 cut(s)	279, 359, 797, 911
AluBI	AGCT	9 cut(s)	97, 106, 362, 634, 935, 950, 991, 1109, 1178
AluI	AGCT	9 cut(s)	97, 106, 362, 634, 935, 950, 991, 1109, 1178
Alw21I	GWGCWC	5 cut(s)	57, 99, 108, 420, 1396
Alw44I	GTGCAC	1 cut(s)	416
AlwI	GGATC	4 cut(s)	1214, 1227, 1361, 1374
AlwNI	CAGNNNCTG	3 cut(s)	239, 1112, 1178
Ama87I	CYCGRG	1 cut(s)	10
AoxI	GGCC	4 cut(s)	168, 198, 1237, 1468
ApaLI	GTGCAC	1 cut(s)	416
ApeKI	GCWGC	9 cut(s)	443, 730, 932, 1106, 1115, 1136, 1169, 1172, 1175
ApoI	RAATTY	1 cut(s)	179
AspLEI	GCGC	2 cut(s)	86, 155
AspS9I	GGNCC	5 cut(s)	247, 743, 1181, 1193, 1304
AsuC2I	CCSGG	2 cut(s)	251, 1185
AsuHPI	GGTGA	4 cut(s)	377, 1335, 1416, 1446
AsuII	TTCGAA	1 cut(s)	435
AvaI	CYCGRG	1 cut(s)	10
AvaII	GGWCC	5 cut(s)	247, 743, 1181, 1193, 1304
BaeGI	GKGCMC	2 cut(s)	420, 963
BaeI	ACNNNNGTAYC	2 cut(s)	553, 586
BamHI	GGATCC	2 cut(s)	1219, 1366
BanI	GGYRCC	1 cut(s)	152
BanII	GRGCYC	2 cut(s)	99, 108
Bbv12I	GWGCWC	5 cut(s)	57, 99, 108, 420, 1396
BbvI	GCAGC	9 cut(s)	430, 742, 944, 1118, 1123, 1127, 1156, 1184, 1187
BccI	CCATC	6 cut(s)	353, 506, 743, 760, 968, 1219
BceAI	ACGGC	1 cut(s)	28
BcgI	CGANNNNNNTGC	2 cut(s)	425, 459
BcnI	CCSGG	2 cut(s)	251, 1185
BfaI	CTAG	4 cut(s)	498, 953, 1074, 1263
BfmI	CTRYAG	5 cut(s)	444, 735, 1104, 1113, 1170
BfoI	RGCGCY	1 cut(s)	156
BfuAI	ACCTGC	1 cut(s)	615
Bme18I	GGWCC	5 cut(s)	247, 743, 1181, 1193, 1304
BmeT110I	CYCGRG	1 cut(s)	10
BmgT120I	GGNCC	5 cut(s)	247, 743, 1181, 1193, 1304
BmiI	GGNNCC	4 cut(s)	154, 1221, 1260, 1368
BmsI	GCATC	5 cut(s)	466, 497, 674, 1060, 1390
BpmI	CTGGAG	2 cut(s)	333, 1125
Bpu10I	CCTNAGC	2 cut(s)	243, 543
Bpu14I	TTCGAA	1 cut(s)	435
BpuMI	CCSGG	2 cut(s)	251, 1185
BsaHI	GRCGYC	3 cut(s)	17, 41, 153
BsaWI	WCCGGW	1 cut(s)	1306
Bsc4I	CCNNNNNNNGG	3 cut(s)	196, 740, 1190
Bse1I	ACTGG	3 cut(s)	271, 610, 1142
BseGI	GGATG	3 cut(s)	267, 517, 829
BseLI	CCNNNNNNNGG	3 cut(s)	196, 740, 1190
BseMII	CTCAG	2 cut(s)	257, 534
BseNI	ACTGG	3 cut(s)	271, 610, 1142
BseRI	GAGGAG	2 cut(s)	104, 107
BseSI	GKGCMC	2 cut(s)	420, 963
BseXI	GCAGC	9 cut(s)	430, 742, 944, 1118, 1123, 1127, 1156, 1184, 1187
BsgI	GTGCAG	3 cut(s)	567, 749, 1305
BshFI	GGCC	4 cut(s)	170, 200, 1239, 1470
BshNI	GGYRCC	1 cut(s)	152
BsiHKAI	GWGCWC	5 cut(s)	57, 99, 108, 420, 1396
BsiHKCI	CYCGRG	1 cut(s)	10
BsiSI	CCGG	3 cut(s)	250, 1184, 1307
BslFI	GGGAC	1 cut(s)	28
BslI	CCNNNNNNNGG	3 cut(s)	196, 740, 1190
BsmFI	GGGAC	1 cut(s)	28
BsmI	GAATGC	3 cut(s)	508, 1132, 1383
BsnI	GGCC	4 cut(s)	170, 200, 1239, 1470
BsoBI	CYCGRG	1 cut(s)	10
Bsp119I	TTCGAA	1 cut(s)	435
Bsp1286I	GDGCHC	6 cut(s)	57, 99, 108, 420, 963, 1396
Bsp143I	GATC	6 cut(s)	126, 592, 1018, 1219, 1241, 1366
Bsp19I	CCATGG	1 cut(s)	1150
BspACI	CCGC	8 cut(s)	20, 64, 494, 930, 1085, 1334, 1346, 1400
BspANI	GGCC	4 cut(s)	170, 200, 1239, 1470
BspCNI	CTCAG	2 cut(s)	256, 535
BspLI	GGNNCC	4 cut(s)	154, 1221, 1260, 1368
BspMAI	CTGCAG	5 cut(s)	448, 739, 1108, 1117, 1174
BspMI	ACCTGC	1 cut(s)	615
BspPI	GGATC	4 cut(s)	1214, 1227, 1361, 1374
BspT104I	TTCGAA	1 cut(s)	435
BspT107I	GGYRCC	1 cut(s)	152
BsrI	ACTGG	3 cut(s)	271, 610, 1142
BssMI	GATC	6 cut(s)	126, 592, 1018, 1219, 1241, 1366
BssNAI	GTATAC	1 cut(s)	524
BssNI	GRCGYC	3 cut(s)	17, 41, 153
BssT1I	CCWWGG	3 cut(s)	507, 1150, 1370
Bst1107I	GTATAC	1 cut(s)	524
Bst4CI	ACNGT	6 cut(s)	262, 820, 838, 859, 1040, 1166
BstACI	GRCGYC	3 cut(s)	17, 41, 153
BstAPI	GCANNNNNTGC	3 cut(s)	938, 1112, 1136
BstBI	TTCGAA	1 cut(s)	435
BstC8I	GCNNGC	8 cut(s)	113, 240, 448, 735, 1083, 1233, 1237, 1332
BstDEI	CTNAG	3 cut(s)	138, 243, 543
BstDSI	CCRYGG	1 cut(s)	1150
BstEII	GGTNACC	1 cut(s)	340
BstENI	CCTNNNNNAGG	2 cut(s)	194, 738
BstF5I	GGATG	3 cut(s)	267, 517, 829
BstH2I	RGCGCY	1 cut(s)	156
BstHHI	GCGC	2 cut(s)	86, 155
BstKTI	GATC	6 cut(s)	129, 595, 1021, 1222, 1244, 1369
BstMBI	GATC	6 cut(s)	126, 592, 1018, 1219, 1241, 1366
BstNSI	RCATGY	3 cut(s)	551, 1231, 1406
BstPI	GGTNACC	1 cut(s)	340
BstSFI	CTRYAG	5 cut(s)	444, 735, 1104, 1113, 1170
BstSLI	GKGCMC	2 cut(s)	420, 963
BstV1I	GCAGC	9 cut(s)	430, 742, 944, 1118, 1123, 1127, 1156, 1184, 1187
BstX2I	RGATCY	2 cut(s)	1219, 1366
BstXI	CCANNNNNNTGG	1 cut(s)	208
BstYI	RGATCY	2 cut(s)	1219, 1366
BstZ17I	GTATAC	1 cut(s)	524
BsuRI	GGCC	4 cut(s)	170, 200, 1239, 1470
BtgI	CCRYGG	1 cut(s)	1150
BtsCI	GGATG	3 cut(s)	267, 517, 829
BtsI	GCAGTG	2 cut(s)	483, 961
BtsIMutI	CAGTG	8 cut(s)	478, 483, 588, 816, 961, 1045, 1149, 1171
BveI	ACCTGC	1 cut(s)	615
Cac8I	GCNNGC	8 cut(s)	113, 240, 448, 735, 1083, 1233, 1237, 1332
CaiI	CAGNNNCTG	3 cut(s)	239, 1112, 1178
CfoI	GCGC	2 cut(s)	86, 155
Cfr13I	GGNCC	5 cut(s)	247, 743, 1181, 1193, 1304
CseI	GACGC	2 cut(s)	25, 49
CsiI	ACCWGGT	1 cut(s)	1411
Csp6I	GTAC	4 cut(s)	31, 532, 860, 1147
CviAII	CATG	8 cut(s)	208, 548, 558, 661, 1151, 1215, 1228, 1403
CviQI	GTAC	4 cut(s)	31, 532, 860, 1147
DdeI	CTNAG	3 cut(s)	138, 243, 543
DinI	GGCGCC	1 cut(s)	154
DpnI	GATC	6 cut(s)	128, 594, 1020, 1221, 1243, 1368
DpnII	GATC	6 cut(s)	126, 592, 1018, 1219, 1241, 1366
DraIII	CACNNNGTG	1 cut(s)	394
EaeI	YGGCCR	1 cut(s)	1468
Ecl136II	GAGCTC	2 cut(s)	97, 106
Eco130I	CCWWGG	3 cut(s)	507, 1150, 1370
Eco147I	AGGCCT	1 cut(s)	170
Eco24I	GRGCYC	2 cut(s)	99, 108
Eco47I	GGWCC	5 cut(s)	247, 743, 1181, 1193, 1304
Eco53kI	GAGCTC	2 cut(s)	97, 106
Eco57I	CTGAAG	1 cut(s)	1341
Eco88I	CYCGRG	1 cut(s)	10
Eco91I	GGTNACC	1 cut(s)	340
EcoICRI	GAGCTC	2 cut(s)	97, 106
EcoNI	CCTNNNNNAGG	2 cut(s)	194, 738
EcoO109I	RGGNCCY	2 cut(s)	743, 1193
EcoO65I	GGTNACC	1 cut(s)	340
EcoRI	GAATTC	1 cut(s)	179
EcoT14I	CCWWGG	3 cut(s)	507, 1150, 1370
EcoT22I	ATGCAT	1 cut(s)	1383
EcoT38I	GRGCYC	2 cut(s)	99, 108
EgeI	GGCGCC	1 cut(s)	154
EheI	GGCGCC	1 cut(s)	154
ErhI	CCWWGG	3 cut(s)	507, 1150, 1370
FaeI	CATG	8 cut(s)	211, 551, 561, 664, 1154, 1218, 1231, 1406
FaqI	GGGAC	1 cut(s)	28
FatI	CATG	8 cut(s)	207, 547, 557, 660, 1150, 1214, 1227, 1402
FauI	CCCGC	1 cut(s)	1327
FblI	GTMKAC	2 cut(s)	5, 523
FokI	GGATG	3 cut(s)	254, 524, 836
FriOI	GRGCYC	2 cut(s)	99, 108
FspBI	CTAG	4 cut(s)	498, 953, 1074, 1263
GlaI	GCGC	2 cut(s)	85, 154
GsuI	CTGGAG	2 cut(s)	333, 1125
HaeII	RGCGCY	1 cut(s)	156
HaeIII	GGCC	4 cut(s)	170, 200, 1239, 1470
HapII	CCGG	3 cut(s)	250, 1184, 1307
HgaI	GACGC	2 cut(s)	25, 49
HhaI	GCGC	2 cut(s)	86, 155
Hin1I	GRCGYC	3 cut(s)	17, 41, 153
Hin1II	CATG	8 cut(s)	211, 551, 561, 664, 1154, 1218, 1231, 1406
Hin6I	GCGC	2 cut(s)	84, 153
HinP1I	GCGC	2 cut(s)	84, 153
HincII	GTYRAC	1 cut(s)	6
HindII	GTYRAC	1 cut(s)	6
HindIII	AAGCTT	1 cut(s)	989
HinfI	GANTC	1 cut(s)	463
HpaII	CCGG	3 cut(s)	250, 1184, 1307
HphI	GGTGA	4 cut(s)	377, 1335, 1416, 1446
Hpy166II	GTNNAC	8 cut(s)	6, 33, 265, 298, 418, 524, 652, 1147
Hpy188I	TCNGA	3 cut(s)	235, 597, 1281
Hpy188III	TCNNGA	4 cut(s)	542, 746, 880, 953
Hpy8I	GTNNAC	8 cut(s)	6, 33, 265, 298, 418, 524, 652, 1147
Hpy99I	CGWCG	3 cut(s)	49, 152, 179
HpyAV	CCTTC	4 cut(s)	43, 181, 704, 1467
HpyCH4III	ACNGT	6 cut(s)	262, 820, 838, 859, 1040, 1166
HpyCH4IV	ACGT	1 cut(s)	147
HpyF3I	CTNAG	3 cut(s)	138, 243, 543
HpySE526I	ACGT	1 cut(s)	147
Hsp92I	GRCGYC	3 cut(s)	17, 41, 153
Hsp92II	CATG	8 cut(s)	211, 551, 561, 664, 1154, 1218, 1231, 1406
HspAI	GCGC	2 cut(s)	84, 153
KasI	GGCGCC	1 cut(s)	152
Kzo9I	GATC	6 cut(s)	126, 592, 1018, 1219, 1241, 1366
LmnI	GCTCC	5 cut(s)	60, 94, 1114, 1144, 1399
Lsp1109I	GCAGC	9 cut(s)	430, 742, 944, 1118, 1123, 1127, 1156, 1184, 1187
LweI	GCATC	5 cut(s)	466, 497, 674, 1060, 1390
MabI	ACCWGGT	1 cut(s)	1411
MaeI	CTAG	4 cut(s)	498, 953, 1074, 1263
MaeII	ACGT	1 cut(s)	147
MaeIII	GTNAC	4 cut(s)	340, 612, 814, 1040
MalI	GATC	6 cut(s)	128, 594, 1020, 1221, 1243, 1368
MboI	GATC	6 cut(s)	126, 592, 1018, 1219, 1241, 1366
MboII	GAAGA	5 cut(s)	136, 528, 769, 821, 895
MflI	RGATCY	2 cut(s)	1219, 1366
MhlI	GDGCHC	6 cut(s)	57, 99, 108, 420, 963, 1396
MluCI	AATT	3 cut(s)	179, 291, 867
Mly113I	GGCGCC	1 cut(s)	153
Mph1103I	ATGCAT	1 cut(s)	1383
MseI	TTAA	1 cut(s)	657
MslI	CAYNNNNRTG	2 cut(s)	206, 1155
MspA1I	CMGCKG	3 cut(s)	634, 935, 1178
MspI	CCGG	3 cut(s)	250, 1184, 1307
Mva1269I	GAATGC	3 cut(s)	508, 1132, 1383
NarI	GGCGCC	1 cut(s)	153
NciI	CCSGG	2 cut(s)	251, 1185
NcoI	CCATGG	1 cut(s)	1150
NdeII	GATC	6 cut(s)	126, 592, 1018, 1219, 1241, 1366
NlaIII	CATG	8 cut(s)	211, 551, 561, 664, 1154, 1218, 1231, 1406
NlaIV	GGNNCC	4 cut(s)	154, 1221, 1260, 1368
NmeAIII	GCCGAG	1 cut(s)	112
NmuCI	GTSAC	3 cut(s)	612, 814, 1040
NsiI	ATGCAT	1 cut(s)	1383
NspI	RCATGY	3 cut(s)	551, 1231, 1406
NspV	TTCGAA	1 cut(s)	435
PasI	CCCWGGG	1 cut(s)	75
PceI	AGGCCT	1 cut(s)	170
PcsI	WCGNNNNNNNCGW	1 cut(s)	41
PctI	GAATGC	3 cut(s)	508, 1132, 1383
PfeI	GAWTC	1 cut(s)	463
PflFI	GACNNNGTC	2 cut(s)	43, 1185
PfoI	TCCNGGA	1 cut(s)	1198
PluTI	GGCGCC	1 cut(s)	156
PpuMI	RGGWCCY	2 cut(s)	743, 1193
Psp124BI	GAGCTC	2 cut(s)	99, 108
Psp5II	RGGWCCY	2 cut(s)	743, 1193
PspEI	GGTNACC	1 cut(s)	340
PspN4I	GGNNCC	4 cut(s)	154, 1221, 1260, 1368
PspPI	GGNCC	5 cut(s)	247, 743, 1181, 1193, 1304
PspPPI	RGGWCCY	2 cut(s)	743, 1193
PstI	CTGCAG	5 cut(s)	448, 739, 1108, 1117, 1174
PstNI	CAGNNNCTG	3 cut(s)	239, 1112, 1178
PsuI	RGATCY	2 cut(s)	1219, 1366
PsyI	GACNNNGTC	2 cut(s)	43, 1185
PvuII	CAGCTG	3 cut(s)	634, 935, 1178
RsaI	GTAC	4 cut(s)	32, 533, 861, 1148
RsaNI	GTAC	4 cut(s)	31, 532, 860, 1147
RseI	CAYNNNNRTG	2 cut(s)	206, 1155
SacI	GAGCTC	2 cut(s)	99, 108
SalI	GTCGAC	1 cut(s)	4
SaqAI	TTAA	1 cut(s)	657
Sau3AI	GATC	6 cut(s)	126, 592, 1018, 1219, 1241, 1366
Sau96I	GGNCC	5 cut(s)	247, 743, 1181, 1193, 1304
SduI	GDGCHC	6 cut(s)	57, 99, 108, 420, 963, 1396
SexAI	ACCWGGT	1 cut(s)	1411
SfaNI	GCATC	5 cut(s)	466, 497, 674, 1060, 1390
SfcI	CTRYAG	5 cut(s)	444, 735, 1104, 1113, 1170
SfoI	GGCGCC	1 cut(s)	154
SfuI	TTCGAA	1 cut(s)	435
SinI	GGWCC	5 cut(s)	247, 743, 1181, 1193, 1304
SmiMI	CAYNNNNRTG	2 cut(s)	206, 1155
Sse9I	AATT	3 cut(s)	179, 291, 867
SseBI	AGGCCT	1 cut(s)	170
SsiI	CCGC	8 cut(s)	20, 64, 494, 930, 1085, 1334, 1346, 1400
SspDI	GGCGCC	1 cut(s)	152
SspMI	CTAG	4 cut(s)	498, 953, 1074, 1263
SstI	GAGCTC	2 cut(s)	99, 108
StuI	AGGCCT	1 cut(s)	170
StyI	CCWWGG	3 cut(s)	507, 1150, 1370
TaaI	ACNGT	6 cut(s)	262, 820, 838, 859, 1040, 1166
TaiI	ACGT	1 cut(s)	150
TaqI	TCGA	8 cut(s)	5, 47, 102, 177, 348, 435, 879, 1438
TasI	AATT	3 cut(s)	179, 291, 867
TatI	WGTACW	1 cut(s)	859
TauI	GCSGC	2 cut(s)	22, 497
TfiI	GAWTC	1 cut(s)	463
Tru1I	TTAA	1 cut(s)	657
Tru9I	TTAA	1 cut(s)	657
TscAI	CASTG	8 cut(s)	478, 490, 595, 823, 968, 1045, 1149, 1171
TseFI	GTSAC	3 cut(s)	612, 814, 1040
TseI	GCWGC	9 cut(s)	443, 730, 932, 1106, 1115, 1136, 1169, 1172, 1175
Tsp45I	GTSAC	3 cut(s)	612, 814, 1040
TspDTI	ATGAA	6 cut(s)	204, 216, 546, 983, 1173, 1329
TspRI	CASTG	8 cut(s)	478, 490, 595, 823, 968, 1045, 1149, 1171
Tth111I	GACNNNGTC	2 cut(s)	43, 1185
VneI	GTGCAC	1 cut(s)	416
VpaK11BI	GGWCC	5 cut(s)	247, 743, 1181, 1193, 1304
XagI	CCTNNNNNAGG	2 cut(s)	194, 738
XapI	RAATTY	1 cut(s)	179
XbaI	TCTAGA	1 cut(s)	952
XceI	RCATGY	3 cut(s)	551, 1231, 1406
XmiI	GTMKAC	2 cut(s)	5, 523
XspI	CTAG	4 cut(s)	498, 953, 1074, 1263
Zsp2I	ATGCAT	1 cut(s)	1383

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.