Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0004917

Physical Location & Seq

Genomic Coordinates Forward (+)

77905152 .. 77909258

Gene Structure 4107 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021746

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1431 bp

ATGTCGACCTCGGGGACGCCGCAGTTCAGGTACACGCAGACGCCGTCGAAGGTGCTCCACCTCCGCAATCTCCCCTGGGAGTGCGCCGAGGAAGAGCTCATCGAGCTCTGCAAGCATTTTGGGAAGATCGTCAATACCAAGTGCAACGTCGGCGCCAATCGCAACCAGGCCTTCGTCGAATTCGCAGACCTAAACCAGGCCATAAACATGGTTTCATATTATGCTTCATCGTCAGAGCCTGCTCAGGTCCGCGGTAAAACAGTTTACATCCAGTATTCAAATAGACACGAAATTGTGAACAACAAAAGCCCTGGAGATGTTCCTGGGAATGTGTTGCTGGTAACCATCGAGGGTGTTGAAGCTGGTGATGTGAGCATTGATGTCATTCACTTGGTGTTTTCTGCTTTTGGGTTTGTGCACAAGATTGCTACTTTCGAAAAGGCTGCAGGCTTCCAGGCATTGATTCAGTTCAGTGATGCTGACACTGCATCTGCGGCTAGGAATGCCTTGGATGGAAGAAGTATACCCAGGTACTTGCTTCCTGAGCATGTTGGTTCATGCCACTTGCGTATCTCGTATTCTGCACACACTGATCTGAACATCAAGTTTCAGTCACACAGAAGCAGGGATTATACAAATCCATACCTTCCTGTAAATCCTACTGCAATAGAGGGAGTTGTGCAGCCTGCGGTAGGTCCTGATGGAAAGAAGAAAGAGATGGAGAGTAATGTGCTTCTGGCTTCCATTGAAAATATGCAGTATGCTGTCACTGTGGATGTTCTTCATACGGTATTTTCAGCGTTTGGCACAGTACAAAAAATTGCTATATTCGAGAAGAATGGTCAAACACAGGCATTAGTTCAATACCCTGATATTGCTACCGCAGCTGTTGCCAGAGAAGCTCTAGAGGGGCACTGCATATATGATGGTGGCTATTGTAAGCTTCATCTATCATACTCTCGTCATACTGATCTCAATGTAAAGGCTTACAGTGACAAAAGTAGAGATTATACAATCCCAGATGCTAGTTTGCTTGCGGTGCAATCTGGCTACCCTGCAGCTCCTGCAGCCTGGCAGAATGCTCAGGCTGCTCCAGTGTACCATGGAAATGAATACAGTGCTGCAGCAGCTGGACCGGGTCAAGGTCCTCCTGGACAAGTGCCATCATGGGATCCAAATATGCAAGCAGGCCGATCATCGTTTGTTTCGGTTCCTAGCACCTTTCCTGGTCAGACATTTCCTACATCATCAGGTGGTCCGGTATATTCCTCTGCACCAATGCCTGCGGGTTCATCACCTCCAATTACTTCAGGTGTGGATCCAAGGGGAATGCATCAGCCAGGTGCTCCACCACATGTGCGACCAGGTGCTGCTTCACCCCCAGGCGTTCGACCTCCTGGTGCTTCACCTTCTTATTACGGCCAATCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000381 GO:0000932 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006417 GO:0007275 GO:0008150 GO:0009791 GO:0009845 GO:0009889 GO:0010468 GO:0010556 GO:0010608 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032268 GO:0032501 GO:0032502 GO:0032991 GO:0034248 GO:0035770 GO:0036464 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043484 GO:0044424 GO:0044444 GO:0044464 GO:0048024 GO:0048856 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051246 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0090351 GO:1903311 GO:1990904 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 RRM_5

Protein Analysis

477

Amino Acids

51.02

Weight (kDa)

6.46

Isoelectric Point (pI)

44.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	21 - 70	8.6e-08	RNA recognition motif
RRM_5	PF13893	229 - 326	4.9e-07	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
RRM_8	PF11835	242 - 320	4e-08	RRM-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004917)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01150 AT3G01150 AT3G01150 AT3G01150
fragaria_vesca	FvH4_6g48200 FvH4_6g48200 FvH4_6g48200 FvH4_6g48200 FvH4_6g48200 FvH4_6g48200 FvH4_6g48200
malus_domestica	MD00G1125500.v1.1 MD00G1167800.v1.1 MD09G1053000.v1.1
prunus_persica	Prupe.3G265700_v2.0.a1 Prupe.3G265700_v2.0.a1
pyrus_communis	pycom111g04420 pycom17g04840
rosa_chinensis	RchiOBHm_Chr2g0167691
rosa_laevigata	RLG00000021746
rosa_multiflora	Rmu_sc0001970.1_g000017 Rmu_sc0002143.1_g000001
rosa_roxburghii	Rroxscaffold_2G00083330
rosa_rugosa	Rorug02G0531300 Rorug02G0531400
rosa_samantha	Rh2AG600300 Rh2BG610800 Rh2CG581200 Rh2DG623500
rosa_wichuraiana	Rw2G049830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	152
AccI	GTMKAC	2 cut(s)	5, 523
AccII	CGCG	1 cut(s)	252
AciI	CCGC	9 cut(s)	20, 64, 250, 252, 494, 689, 882, 1037, 1286
AclWI	GGATC	4 cut(s)	1166, 1179, 1313, 1326
AcoI	YGGCCR	1 cut(s)	1420
AcsI	RAATTY	1 cut(s)	179
AcuI	CTGAAG	1 cut(s)	1293
AcyI	GRCGYC	3 cut(s)	17, 41, 153
AdeI	CACNNNGTG	1 cut(s)	394
AfaI	GTAC	4 cut(s)	32, 533, 813, 1100
AfiI	CCNNNNNNNGG	3 cut(s)	196, 692, 1142
AflIII	ACRYGT	1 cut(s)	1354
AgsI	TTSAA	4 cut(s)	279, 359, 749, 863
AluBI	AGCT	8 cut(s)	97, 106, 362, 887, 902, 943, 1061, 1130
AluI	AGCT	8 cut(s)	97, 106, 362, 887, 902, 943, 1061, 1130
Alw21I	GWGCWC	5 cut(s)	57, 99, 108, 420, 1348
Alw44I	GTGCAC	1 cut(s)	416
AlwI	GGATC	4 cut(s)	1166, 1179, 1313, 1326
AlwNI	CAGNNNCTG	4 cut(s)	239, 1064, 1130, 1370
Ama87I	CYCGRG	1 cut(s)	10
AoxI	GGCC	4 cut(s)	168, 198, 1189, 1420
ApaLI	GTGCAC	1 cut(s)	416
ApoI	RAATTY	1 cut(s)	179
AspLEI	GCGC	2 cut(s)	86, 155
AspS9I	GGNCC	5 cut(s)	247, 695, 1133, 1145, 1256
AsuC2I	CCSGG	1 cut(s)	1137
AsuHPI	GGTGA	4 cut(s)	377, 1287, 1368, 1398
AsuII	TTCGAA	1 cut(s)	435
AvaI	CYCGRG	1 cut(s)	10
AvaII	GGWCC	5 cut(s)	247, 695, 1133, 1145, 1256
BaeGI	GKGCMC	2 cut(s)	420, 915
BaeI	ACNNNNGTAYC	2 cut(s)	553, 586
BamHI	GGATCC	2 cut(s)	1171, 1318
BanI	GGYRCC	1 cut(s)	152
BanII	GRGCYC	2 cut(s)	99, 108
Bbv12I	GWGCWC	5 cut(s)	57, 99, 108, 420, 1348
BccI	CCATC	6 cut(s)	353, 506, 695, 712, 920, 1171
BceAI	ACGGC	1 cut(s)	28
BcgI	CGANNNNNNTGC	2 cut(s)	425, 459
BcnI	CCSGG	1 cut(s)	1137
BfaI	CTAG	4 cut(s)	498, 905, 1026, 1215
BfmI	CTRYAG	4 cut(s)	444, 1056, 1065, 1122
BfoI	RGCGCY	1 cut(s)	156
Bme18I	GGWCC	5 cut(s)	247, 695, 1133, 1145, 1256
BmeT110I	CYCGRG	1 cut(s)	10
BmgT120I	GGNCC	5 cut(s)	247, 695, 1133, 1145, 1256
BmiI	GGNNCC	4 cut(s)	154, 1173, 1212, 1320
BmsI	GCATC	4 cut(s)	466, 497, 1012, 1342
BpmI	CTGGAG	2 cut(s)	333, 1077
Bpu10I	CCTNAGC	3 cut(s)	243, 543, 1083
Bpu14I	TTCGAA	1 cut(s)	435
BpuMI	CCSGG	1 cut(s)	1137
BsaHI	GRCGYC	3 cut(s)	17, 41, 153
BsaWI	WCCGGW	1 cut(s)	1258
Bsc4I	CCNNNNNNNGG	3 cut(s)	196, 692, 1142
Bse1I	ACTGG	2 cut(s)	271, 1094
BseGI	GGATG	3 cut(s)	267, 517, 781
BseLI	CCNNNNNNNGG	3 cut(s)	196, 692, 1142
BseMII	CTCAG	3 cut(s)	257, 534, 1097
BseNI	ACTGG	2 cut(s)	271, 1094
BseSI	GKGCMC	2 cut(s)	420, 915
BsgI	GTGCAG	3 cut(s)	567, 701, 1257
Bsh1236I	CGCG	1 cut(s)	252
BshFI	GGCC	4 cut(s)	170, 200, 1191, 1422
BshNI	GGYRCC	1 cut(s)	152
BsiHKAI	GWGCWC	5 cut(s)	57, 99, 108, 420, 1348
BsiHKCI	CYCGRG	1 cut(s)	10
BsiSI	CCGG	2 cut(s)	1136, 1259
BslFI	GGGAC	1 cut(s)	28
BslI	CCNNNNNNNGG	3 cut(s)	196, 692, 1142
BsmFI	GGGAC	1 cut(s)	28
BsmI	GAATGC	3 cut(s)	508, 1084, 1335
BsnI	GGCC	4 cut(s)	170, 200, 1191, 1422
BsoBI	CYCGRG	1 cut(s)	10
Bsp119I	TTCGAA	1 cut(s)	435
Bsp1286I	GDGCHC	6 cut(s)	57, 99, 108, 420, 915, 1348
Bsp143I	GATC	6 cut(s)	126, 592, 970, 1171, 1193, 1318
Bsp19I	CCATGG	1 cut(s)	1102
BspACI	CCGC	9 cut(s)	20, 64, 250, 252, 494, 689, 882, 1037, 1286
BspANI	GGCC	4 cut(s)	170, 200, 1191, 1422
BspCNI	CTCAG	3 cut(s)	256, 535, 1096
BspFNI	CGCG	1 cut(s)	252
BspLI	GGNNCC	4 cut(s)	154, 1173, 1212, 1320
BspMAI	CTGCAG	4 cut(s)	448, 1060, 1069, 1126
BspPI	GGATC	4 cut(s)	1166, 1179, 1313, 1326
BspQI	GCTCTTC	1 cut(s)	87
BspT104I	TTCGAA	1 cut(s)	435
BspT107I	GGYRCC	1 cut(s)	152
BsrI	ACTGG	2 cut(s)	271, 1094
BssMI	GATC	6 cut(s)	126, 592, 970, 1171, 1193, 1318
BssNAI	GTATAC	1 cut(s)	524
BssNI	GRCGYC	3 cut(s)	17, 41, 153
BssT1I	CCWWGG	3 cut(s)	507, 1102, 1322
Bst1107I	GTATAC	1 cut(s)	524
Bst4CI	ACNGT	6 cut(s)	262, 772, 790, 811, 992, 1118
Bst6I	CTCTTC	1 cut(s)	87
BstACI	GRCGYC	3 cut(s)	17, 41, 153
BstAPI	GCANNNNNTGC	2 cut(s)	890, 1064
BstBI	TTCGAA	1 cut(s)	435
BstC8I	GCNNGC	8 cut(s)	113, 240, 448, 687, 1035, 1185, 1189, 1284
BstDEI	CTNAG	3 cut(s)	243, 543, 1083
BstDSI	CCRYGG	2 cut(s)	250, 1102
BstEII	GGTNACC	1 cut(s)	340
BstENI	CCTNNNNNAGG	2 cut(s)	194, 690
BstF5I	GGATG	3 cut(s)	267, 517, 781
BstFNI	CGCG	1 cut(s)	252
BstH2I	RGCGCY	1 cut(s)	156
BstHHI	GCGC	2 cut(s)	86, 155
BstKTI	GATC	6 cut(s)	129, 595, 973, 1174, 1196, 1321
BstMBI	GATC	6 cut(s)	126, 592, 970, 1171, 1193, 1318
BstNSI	RCATGY	2 cut(s)	551, 1358
BstPI	GGTNACC	1 cut(s)	340
BstSFI	CTRYAG	4 cut(s)	444, 1056, 1065, 1122
BstSLI	GKGCMC	2 cut(s)	420, 915
BstUI	CGCG	1 cut(s)	252
BstX2I	RGATCY	2 cut(s)	1171, 1318
BstXI	CCANNNNNNTGG	1 cut(s)	208
BstYI	RGATCY	2 cut(s)	1171, 1318
BstZ17I	GTATAC	1 cut(s)	524
BsuRI	GGCC	4 cut(s)	170, 200, 1191, 1422
BtgI	CCRYGG	2 cut(s)	250, 1102
BtsCI	GGATG	3 cut(s)	267, 517, 781
BtsI	GCAGTG	2 cut(s)	483, 913
BtsIMutI	CAGTG	8 cut(s)	478, 483, 588, 768, 913, 997, 1101, 1123
Cac8I	GCNNGC	8 cut(s)	113, 240, 448, 687, 1035, 1185, 1189, 1284
CaiI	CAGNNNCTG	4 cut(s)	239, 1064, 1130, 1370
CfoI	GCGC	2 cut(s)	86, 155
Cfr13I	GGNCC	5 cut(s)	247, 695, 1133, 1145, 1256
Cfr42I	CCGCGG	1 cut(s)	253
CseI	GACGC	2 cut(s)	25, 49
CsiI	ACCWGGT	1 cut(s)	1363
Csp6I	GTAC	4 cut(s)	31, 532, 812, 1099
CviAII	CATG	6 cut(s)	208, 548, 558, 1103, 1167, 1355
CviQI	GTAC	4 cut(s)	31, 532, 812, 1099
DdeI	CTNAG	3 cut(s)	243, 543, 1083
DinI	GGCGCC	1 cut(s)	154
DpnI	GATC	6 cut(s)	128, 594, 972, 1173, 1195, 1320
DpnII	GATC	6 cut(s)	126, 592, 970, 1171, 1193, 1318
DraIII	CACNNNGTG	1 cut(s)	394
EaeI	YGGCCR	1 cut(s)	1420
Eam1104I	CTCTTC	1 cut(s)	87
EarI	CTCTTC	1 cut(s)	87
Ecl136II	GAGCTC	2 cut(s)	97, 106
Eco130I	CCWWGG	3 cut(s)	507, 1102, 1322
Eco147I	AGGCCT	1 cut(s)	170
Eco24I	GRGCYC	2 cut(s)	99, 108
Eco47I	GGWCC	5 cut(s)	247, 695, 1133, 1145, 1256
Eco53kI	GAGCTC	2 cut(s)	97, 106
Eco57I	CTGAAG	1 cut(s)	1293
Eco88I	CYCGRG	1 cut(s)	10
Eco91I	GGTNACC	1 cut(s)	340
EcoICRI	GAGCTC	2 cut(s)	97, 106
EcoNI	CCTNNNNNAGG	2 cut(s)	194, 690
EcoO109I	RGGNCCY	2 cut(s)	695, 1145
EcoO65I	GGTNACC	1 cut(s)	340
EcoRI	GAATTC	1 cut(s)	179
EcoT14I	CCWWGG	3 cut(s)	507, 1102, 1322
EcoT22I	ATGCAT	1 cut(s)	1335
EcoT38I	GRGCYC	2 cut(s)	99, 108
EgeI	GGCGCC	1 cut(s)	154
EheI	GGCGCC	1 cut(s)	154
ErhI	CCWWGG	3 cut(s)	507, 1102, 1322
FaeI	CATG	6 cut(s)	211, 551, 561, 1106, 1170, 1358
FaqI	GGGAC	1 cut(s)	28
FatI	CATG	6 cut(s)	207, 547, 557, 1102, 1166, 1354
FauI	CCCGC	1 cut(s)	1279
FblI	GTMKAC	2 cut(s)	5, 523
FokI	GGATG	3 cut(s)	254, 524, 788
FriOI	GRGCYC	2 cut(s)	99, 108
FspBI	CTAG	4 cut(s)	498, 905, 1026, 1215
GlaI	GCGC	2 cut(s)	85, 154
GsuI	CTGGAG	2 cut(s)	333, 1077
HaeII	RGCGCY	1 cut(s)	156
HaeIII	GGCC	4 cut(s)	170, 200, 1191, 1422
HapII	CCGG	2 cut(s)	1136, 1259
HgaI	GACGC	2 cut(s)	25, 49
HhaI	GCGC	2 cut(s)	86, 155
Hin1I	GRCGYC	3 cut(s)	17, 41, 153
Hin1II	CATG	6 cut(s)	211, 551, 561, 1106, 1170, 1358
Hin6I	GCGC	2 cut(s)	84, 153
HinP1I	GCGC	2 cut(s)	84, 153
HincII	GTYRAC	1 cut(s)	6
HindII	GTYRAC	1 cut(s)	6
HindIII	AAGCTT	1 cut(s)	941
HinfI	GANTC	1 cut(s)	463
HpaII	CCGG	2 cut(s)	1136, 1259
HphI	GGTGA	4 cut(s)	377, 1287, 1368, 1398
Hpy166II	GTNNAC	7 cut(s)	6, 33, 265, 298, 418, 524, 1099
Hpy188I	TCNGA	3 cut(s)	235, 597, 1233
Hpy188III	TCNNGA	4 cut(s)	542, 698, 832, 905
Hpy8I	GTNNAC	7 cut(s)	6, 33, 265, 298, 418, 524, 1099
Hpy99I	CGWCG	3 cut(s)	49, 152, 179
HpyAV	CCTTC	4 cut(s)	43, 181, 656, 1419
HpyCH4III	ACNGT	6 cut(s)	262, 772, 790, 811, 992, 1118
HpyCH4IV	ACGT	1 cut(s)	147
HpyF3I	CTNAG	3 cut(s)	243, 543, 1083
HpySE526I	ACGT	1 cut(s)	147
Hsp92I	GRCGYC	3 cut(s)	17, 41, 153
Hsp92II	CATG	6 cut(s)	211, 551, 561, 1106, 1170, 1358
HspAI	GCGC	2 cut(s)	84, 153
KasI	GGCGCC	1 cut(s)	152
KspI	CCGCGG	1 cut(s)	253
Kzo9I	GATC	6 cut(s)	126, 592, 970, 1171, 1193, 1318
LguI	GCTCTTC	1 cut(s)	87
LmnI	GCTCC	4 cut(s)	60, 1066, 1096, 1351
LweI	GCATC	4 cut(s)	466, 497, 1012, 1342
MabI	ACCWGGT	1 cut(s)	1363
MaeI	CTAG	4 cut(s)	498, 905, 1026, 1215
MaeII	ACGT	1 cut(s)	147
MaeIII	GTNAC	4 cut(s)	340, 612, 766, 992
MalI	GATC	6 cut(s)	128, 594, 972, 1173, 1195, 1320
MboI	GATC	6 cut(s)	126, 592, 970, 1171, 1193, 1318
MboII	GAAGA	6 cut(s)	104, 136, 528, 721, 773, 847
MflI	RGATCY	2 cut(s)	1171, 1318
MhlI	GDGCHC	6 cut(s)	57, 99, 108, 420, 915, 1348
MluCI	AATT	4 cut(s)	179, 291, 819, 1302
Mly113I	GGCGCC	1 cut(s)	153
Mph1103I	ATGCAT	1 cut(s)	1335
MslI	CAYNNNNRTG	2 cut(s)	206, 1107
MspA1I	CMGCKG	3 cut(s)	252, 887, 1130
MspI	CCGG	2 cut(s)	1136, 1259
Mva1269I	GAATGC	3 cut(s)	508, 1084, 1335
MvnI	CGCG	1 cut(s)	252
NarI	GGCGCC	1 cut(s)	153
NciI	CCSGG	1 cut(s)	1137
NcoI	CCATGG	1 cut(s)	1102
NdeII	GATC	6 cut(s)	126, 592, 970, 1171, 1193, 1318
NlaIII	CATG	6 cut(s)	211, 551, 561, 1106, 1170, 1358
NlaIV	GGNNCC	4 cut(s)	154, 1173, 1212, 1320
NmeAIII	GCCGAG	1 cut(s)	112
NmuCI	GTSAC	3 cut(s)	612, 766, 992
NsiI	ATGCAT	1 cut(s)	1335
NspI	RCATGY	2 cut(s)	551, 1358
NspV	TTCGAA	1 cut(s)	435
PasI	CCCWGGG	1 cut(s)	75
PceI	AGGCCT	1 cut(s)	170
PciI	ACATGT	1 cut(s)	1354
PciSI	GCTCTTC	1 cut(s)	87
PcsI	WCGNNNNNNNCGW	1 cut(s)	41
PctI	GAATGC	3 cut(s)	508, 1084, 1335
PfeI	GAWTC	1 cut(s)	463
PflFI	GACNNNGTC	2 cut(s)	43, 1137
PfoI	TCCNGGA	1 cut(s)	1150
PluTI	GGCGCC	1 cut(s)	156
PpuMI	RGGWCCY	2 cut(s)	695, 1145
PscI	ACATGT	1 cut(s)	1354
Psp124BI	GAGCTC	2 cut(s)	99, 108
Psp5II	RGGWCCY	2 cut(s)	695, 1145
PspEI	GGTNACC	1 cut(s)	340
PspN4I	GGNNCC	4 cut(s)	154, 1173, 1212, 1320
PspPI	GGNCC	5 cut(s)	247, 695, 1133, 1145, 1256
PspPPI	RGGWCCY	2 cut(s)	695, 1145
PstI	CTGCAG	4 cut(s)	448, 1060, 1069, 1126
PstNI	CAGNNNCTG	4 cut(s)	239, 1064, 1130, 1370
PsuI	RGATCY	2 cut(s)	1171, 1318
PsyI	GACNNNGTC	2 cut(s)	43, 1137
PvuII	CAGCTG	2 cut(s)	887, 1130
RsaI	GTAC	4 cut(s)	32, 533, 813, 1100
RsaNI	GTAC	4 cut(s)	31, 532, 812, 1099
RseI	CAYNNNNRTG	2 cut(s)	206, 1107
SacI	GAGCTC	2 cut(s)	99, 108
SacII	CCGCGG	1 cut(s)	253
SalI	GTCGAC	1 cut(s)	4
SapI	GCTCTTC	1 cut(s)	87
Sau3AI	GATC	6 cut(s)	126, 592, 970, 1171, 1193, 1318
Sau96I	GGNCC	5 cut(s)	247, 695, 1133, 1145, 1256
SduI	GDGCHC	6 cut(s)	57, 99, 108, 420, 915, 1348
SexAI	ACCWGGT	1 cut(s)	1363
SfaNI	GCATC	4 cut(s)	466, 497, 1012, 1342
SfcI	CTRYAG	4 cut(s)	444, 1056, 1065, 1122
SfoI	GGCGCC	1 cut(s)	154
Sfr303I	CCGCGG	1 cut(s)	253
SfuI	TTCGAA	1 cut(s)	435
SgrBI	CCGCGG	1 cut(s)	253
SinI	GGWCC	5 cut(s)	247, 695, 1133, 1145, 1256
SmiMI	CAYNNNNRTG	2 cut(s)	206, 1107
Sse9I	AATT	4 cut(s)	179, 291, 819, 1302
SseBI	AGGCCT	1 cut(s)	170
SsiI	CCGC	9 cut(s)	20, 64, 250, 252, 494, 689, 882, 1037, 1286
SspDI	GGCGCC	1 cut(s)	152
SspMI	CTAG	4 cut(s)	498, 905, 1026, 1215
SstI	GAGCTC	2 cut(s)	99, 108
StuI	AGGCCT	1 cut(s)	170
StyI	CCWWGG	3 cut(s)	507, 1102, 1322
TaaI	ACNGT	6 cut(s)	262, 772, 790, 811, 992, 1118
TaiI	ACGT	1 cut(s)	150
TaqI	TCGA	8 cut(s)	5, 47, 102, 177, 348, 435, 831, 1390
TasI	AATT	4 cut(s)	179, 291, 819, 1302
TatI	WGTACW	1 cut(s)	811
TauI	GCSGC	2 cut(s)	22, 497
TfiI	GAWTC	1 cut(s)	463
TscAI	CASTG	8 cut(s)	478, 490, 595, 775, 920, 997, 1101, 1123
TseFI	GTSAC	3 cut(s)	612, 766, 992
Tsp45I	GTSAC	3 cut(s)	612, 766, 992
TspDTI	ATGAA	7 cut(s)	204, 216, 546, 773, 935, 1125, 1281
TspRI	CASTG	8 cut(s)	478, 490, 595, 775, 920, 997, 1101, 1123
Tth111I	GACNNNGTC	2 cut(s)	43, 1137
VneI	GTGCAC	1 cut(s)	416
VpaK11BI	GGWCC	5 cut(s)	247, 695, 1133, 1145, 1256
XagI	CCTNNNNNAGG	2 cut(s)	194, 690
XapI	RAATTY	1 cut(s)	179
XbaI	TCTAGA	1 cut(s)	904
XceI	RCATGY	2 cut(s)	551, 1358
XmiI	GTMKAC	2 cut(s)	5, 523
XspI	CTAG	4 cut(s)	498, 905, 1026, 1215
Zsp2I	ATGCAT	1 cut(s)	1335

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.