MD09G1190900.v1.1

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Forward (+)
16674782 .. 16677591
2810 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1190900.v1.1.491

Sequence Viewer

Length: 1287 bp
ATGGGAACTCCAGGAAAATGGCTGAAATCACTTATCAATCCCAAAAAGGCCACCAATTTTGACCAAGAGAAGATGGGGGACAAAGGGAAGAAAAAGTGGAAGCTATGGAGGAGTTCATCGGAAGGGTTTGGGTCACCGGCCAAAGGTGGGGTGAAGAGGAGCCAAGTGACGGCTTCAAAGACCACGTCGGTTGATGAAGCACTGGCAGCTGCAATGGTTGCTCTGGTCAGAACTCAGCCTAAAGATTTTCAGGTCCTCAAGCAAGAGTGGGCTGCTATTCGTATCCAAGCCGTGTTTCGCGGATTCTTGGCAAGGCAGGCTTTGAGGGCCTTGAGAGCAGTGGTAAGGCTTCAGGCTTTATTTCGTGGTCGGCAGGTTAGGAAGCAAGCCGCGGTTACACTGAGGTGCATGCAGGCACTTGTTCGAGTTCAGGCTCGAGTGCGAGCACAAAGAAACTCTGAAGAAGGGCAATCTGTGAATGACACATTGGATGAACAATTCTACCAAGCTGATCCCATTAAGCAGGCTGAGCAAGGATGGTGTGATAGTCCCGGAACGGTGAGTGAAGTTAGAGCAAAGCTTCAAATGAGACAAAGAGGAAACATAAAGAGGGAGAGGGCAATTGCATACTCCTCTCAACAGAGACCAAGATCTGCCAGTCCATATAGTAGGGGAAAAAAGACACCAAAGGATGTTAGACATCAGAAGGTAGCCGAAAAGACTTCAGGATGGAGTTGGATAGAAAAGTGGATGGCAGCCAAACCATGGGAAAACAGACTGATGGAAGAGATTCATAGCTTGCCATCGGAAGTGACTCATCCTTATTCTAGGAAAAGTGATGGCAGTGTTGGCTTTTGTCCAATTTCTTCTGAACAGAACTCGGTGAAAGTGACGAGGAACAATGTCACAACTAGGGTTTATGCTGGGCCTCGTACAGCAAGTCCTATTACTCGCTCATCTTCTACCCCGAGTTCTGATTTTTTACAGGATGAGACCTCAGGATCACATTCTTCTACGTCTTCAACTTTAGTGTCTGGCAACTACCTAAAGGTAGAAAATGTAGAGGAAGCTAATGTAGGGAAACCCGGTTACATGAATCTCACACAATCAACTAAGGCCAAGCAGAGAACTTCCAATTGTTTTAATATGCAGAGGCATTCCATGGAGGAGTATCATTATCATAACAAGTCAATGGGATTATTGAACGACGATACAAGGAGCAATGGCGATTCTGATCTGTATCCTCCAGTATTTGCTGGTAGAGCTGAGCGAGTAAGATATCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

429

Amino Acids

48.17

Weight (kDa)

10.19

Isoelectric Point (pI)

50.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 364
AccB7I CCANNNNNTGG 1 cut(s) 765
AccII CGCG 2 cut(s) 300, 392
AciI CCGC 3 cut(s) 300, 390, 392
AclWI GGATC 2 cut(s) 506, 1009
AcoI YGGCCR 1 cut(s) 138
AcuI CTGAAG 3 cut(s) 335, 480, 708
AfaI GTAC 1 cut(s) 934
AfiI CCNNNNNNNGG 4 cut(s) 143, 147, 169, 765
AgsI TTSAA 4 cut(s) 177, 584, 1023, 1204
AjiI CACGTC 1 cut(s) 186
AjnI CCWGG 1 cut(s) 10
AjuI GAANNNNNNNTTGG 4 cut(s) 279, 311, 470, 502
AleI CACNNNNGTG 1 cut(s) 403
AluBI AGCT 7 cut(s) 103, 209, 509, 580, 798, 1070, 1265
AluI AGCT 7 cut(s) 103, 209, 509, 580, 798, 1070, 1265
Alw21I GWGCWC 1 cut(s) 448
Alw26I GTCTC 3 cut(s) 583, 637, 986
AlwI GGATC 2 cut(s) 506, 1009
Ama87I CYCGRG 2 cut(s) 435, 967
AoxI GGCC 5 cut(s) 48, 138, 327, 926, 1116
ApeKI GCWGC 4 cut(s) 206, 209, 272, 755
ArsI GACNNNNNNTTYG 2 cut(s) 170, 202
Asp700I GAANNNNTTC 1 cut(s) 789
AspS9I GGNCC 3 cut(s) 253, 327, 926
AsuC2I CCSGG 2 cut(s) 552, 1086
AsuHPI GGTGA 4 cut(s) 126, 163, 571, 895
AvaI CYCGRG 2 cut(s) 435, 967
AvaII GGWCC 1 cut(s) 253
AxyI CCTNAGG 1 cut(s) 997
BbsI GAAGAC 1 cut(s) 1011
Bbv12I GWGCWC 1 cut(s) 448
BbvI GCAGC 4 cut(s) 196, 218, 259, 767
BccI CCATC 7 cut(s) 67, 531, 723, 745, 775, 811, 833
BceAI ACGGC 2 cut(s) 186, 275
BciT130I CCWGG 1 cut(s) 12
BciVI GTATCC 2 cut(s) 293, 1251
BcnI CCSGG 2 cut(s) 552, 1086
BcoDI GTCTC 3 cut(s) 583, 637, 986
BfaI CTAG 2 cut(s) 828, 912
BfuAI ACCTGC 1 cut(s) 364
BfuI GTATCC 2 cut(s) 293, 1251
BglII AGATCT 1 cut(s) 650
BisI GCNGC 5 cut(s) 207, 210, 273, 390, 756
BlpI GCTNAGC 2 cut(s) 528, 1266
BlsI GCNGC 5 cut(s) 208, 211, 274, 391, 757
Bme1390I CCNGG 3 cut(s) 12, 552, 1086
Bme18I GGWCC 1 cut(s) 253
BmeT110I CYCGRG 2 cut(s) 435, 967
BmgBI CACGTC 1 cut(s) 186
BmgT120I GGNCC 3 cut(s) 253, 327, 926
BmiI GGNNCC 1 cut(s) 161
BmrFI CCNGG 3 cut(s) 12, 552, 1086
BpiI GAAGAC 1 cut(s) 1011
BpmI CTGGAG 1 cut(s) 1230
Bpu1102I GCTNAGC 2 cut(s) 528, 1266
BpuEI CTTGAG 2 cut(s) 242, 352
BpuMI CCSGG 2 cut(s) 552, 1086
Bsa29I ATCGAT 1 cut(s) 1282
BsaBI GATNNNNATC 2 cut(s) 1233, 1239
BsaI GGTCTC 2 cut(s) 637, 986
BsaJI CCNNGG 3 cut(s) 390, 764, 1161
Bsc4I CCNNNNNNNGG 4 cut(s) 143, 147, 169, 765
Bse118I RCCGGY 1 cut(s) 136
Bse1I ACTGG 3 cut(s) 207, 657, 1247
Bse21I CCTNAGG 1 cut(s) 997
Bse3DI GCAATG 2 cut(s) 219, 1228
Bse8I GATNNNNATC 2 cut(s) 1233, 1239
BseBI CCWGG 1 cut(s) 12
BseCI ATCGAT 1 cut(s) 1282
BseDI CCNNGG 3 cut(s) 390, 764, 1161
BseGI GGATG 7 cut(s) 496, 542, 697, 734, 756, 817, 994
BseJI GATNNNNATC 2 cut(s) 1233, 1239
BseLI CCNNNNNNNGG 4 cut(s) 143, 147, 169, 765
BseMI GCAATG 2 cut(s) 219, 1228
BseMII CTCAG 5 cut(s) 248, 392, 519, 1011, 1257
BseNI ACTGG 3 cut(s) 207, 657, 1247
BseRI GAGGAG 4 cut(s) 124, 172, 622, 1181
BseXI GCAGC 4 cut(s) 196, 218, 259, 767
BseYI CCCAGC 1 cut(s) 923
Bsh1236I CGCG 2 cut(s) 300, 392
BshFI GGCC 5 cut(s) 50, 140, 329, 928, 1118
BshVI ATCGAT 1 cut(s) 1282
BsiHKAI GWGCWC 1 cut(s) 448
BsiHKCI CYCGRG 2 cut(s) 435, 967
BsiSI CCGG 3 cut(s) 137, 552, 1086
BslFI GGGAC 2 cut(s) 92, 534
BslI CCNNNNNNNGG 4 cut(s) 143, 147, 169, 765
BsmAI GTCTC 3 cut(s) 583, 637, 986
BsmFI GGGAC 2 cut(s) 92, 534
BsmI GAATGC 1 cut(s) 1156
BsnI GGCC 5 cut(s) 50, 140, 329, 928, 1118
Bso31I GGTCTC 2 cut(s) 637, 986
BsoBI CYCGRG 2 cut(s) 435, 967
Bsp1286I GDGCHC 1 cut(s) 448
Bsp143I GATC 4 cut(s) 511, 650, 1001, 1234
Bsp1720I GCTNAGC 2 cut(s) 528, 1266
Bsp19I CCATGG 2 cut(s) 764, 1161
BspACI CCGC 3 cut(s) 300, 390, 392
BspANI GGCC 5 cut(s) 50, 140, 329, 928, 1118
BspCNI CTCAG 5 cut(s) 247, 393, 520, 1010, 1258
BspDI ATCGAT 1 cut(s) 1282
BspFNI CGCG 2 cut(s) 300, 392
BspLI GGNNCC 1 cut(s) 161
BspMI ACCTGC 1 cut(s) 364
BspPI GGATC 2 cut(s) 506, 1009
BspTNI GGTCTC 2 cut(s) 637, 986
BsrDI GCAATG 2 cut(s) 219, 1228
BsrFI RCCGGY 1 cut(s) 136
BsrI ACTGG 3 cut(s) 207, 657, 1247
BssAI RCCGGY 1 cut(s) 136
BssECI CCNNGG 3 cut(s) 390, 764, 1161
BssMI GATC 4 cut(s) 511, 650, 1001, 1234
BssT1I CCWWGG 2 cut(s) 764, 1161
Bst2UI CCWGG 1 cut(s) 12
Bst4CI ACNGT 1 cut(s) 559
Bst6I CTCTTC 2 cut(s) 149, 780
BstAPI GCANNNNNTGC 1 cut(s) 218
BstC8I GCNNGC 7 cut(s) 318, 387, 410, 414, 444, 525, 800
BstDEI CTNAG 6 cut(s) 234, 401, 528, 997, 1113, 1266
BstDSI CCRYGG 3 cut(s) 390, 764, 1161
BstEII GGTNACC 1 cut(s) 132
BstF5I GGATG 7 cut(s) 496, 542, 697, 734, 756, 817, 994
BstFNI CGCG 2 cut(s) 300, 392
BstKTI GATC 4 cut(s) 514, 653, 1004, 1237
BstMAI GTCTC 3 cut(s) 583, 637, 986
BstMBI GATC 4 cut(s) 511, 650, 1001, 1234
BstMWI GCNNNNNNNGC 8 cut(s) 206, 218, 317, 326, 335, 529, 849, 1262
BstNI CCWGG 1 cut(s) 12
BstNSI RCATGY 1 cut(s) 412
BstPI GGTNACC 1 cut(s) 132
BstSCI CCNGG 3 cut(s) 10, 550, 1084
BstUI CGCG 2 cut(s) 300, 392
BstV1I GCAGC 4 cut(s) 196, 218, 259, 767
BstV2I GAAGAC 1 cut(s) 1011
BstX2I RGATCY 1 cut(s) 650
BstXI CCANNNNNNTGG 1 cut(s) 18
BstYI RGATCY 1 cut(s) 650
Bsu15I ATCGAT 1 cut(s) 1282
Bsu36I CCTNAGG 1 cut(s) 997
BsuI GTATCC 2 cut(s) 293, 1251
BsuRI GGCC 5 cut(s) 50, 140, 329, 928, 1118
BsuTUI ATCGAT 1 cut(s) 1282
BtgI CCRYGG 3 cut(s) 390, 764, 1161
BtrI CACGTC 1 cut(s) 186
BtsCI GGATG 7 cut(s) 496, 542, 697, 734, 756, 817, 994
BtsI GCAGTG 2 cut(s) 345, 850
BtsIMutI CAGTG 4 cut(s) 200, 345, 398, 850
BveI ACCTGC 1 cut(s) 364
Cac8I GCNNGC 7 cut(s) 318, 387, 410, 414, 444, 525, 800
Cfr10I RCCGGY 1 cut(s) 136
Cfr13I GGNCC 3 cut(s) 253, 327, 926
Cfr42I CCGCGG 1 cut(s) 393
ClaI ATCGAT 1 cut(s) 1282
Csp6I GTAC 1 cut(s) 933
CspCI CAANNNNNGTGG 4 cut(s) 40, 75, 172, 207
CviAII CATG 4 cut(s) 409, 765, 1093, 1162
CviQI GTAC 1 cut(s) 933
DdeI CTNAG 6 cut(s) 234, 401, 528, 997, 1113, 1266
DpnI GATC 4 cut(s) 513, 652, 1003, 1236
DpnII GATC 4 cut(s) 511, 650, 1001, 1234
EaeI YGGCCR 1 cut(s) 138
Eam1104I CTCTTC 2 cut(s) 149, 780
EarI CTCTTC 2 cut(s) 149, 780
Eco130I CCWWGG 2 cut(s) 764, 1161
Eco31I GGTCTC 2 cut(s) 637, 986
Eco32I GATATC 1 cut(s) 1280
Eco47I GGWCC 1 cut(s) 253
Eco57I CTGAAG 3 cut(s) 335, 480, 708
Eco81I CCTNAGG 1 cut(s) 997
Eco88I CYCGRG 2 cut(s) 435, 967
Eco91I GGTNACC 1 cut(s) 132
EcoO109I RGGNCCY 2 cut(s) 253, 327
EcoO65I GGTNACC 1 cut(s) 132
EcoRII CCWGG 1 cut(s) 10
EcoRV GATATC 1 cut(s) 1280
EcoT14I CCWWGG 2 cut(s) 764, 1161
ErhI CCWWGG 2 cut(s) 764, 1161
FaeI CATG 4 cut(s) 412, 768, 1096, 1165
FalI AAGNNNNNCTT 2 cut(s) 304, 336
FaqI GGGAC 2 cut(s) 92, 534
FatI CATG 4 cut(s) 408, 764, 1092, 1161
Fnu4HI GCNGC 5 cut(s) 207, 210, 273, 390, 756
FokI GGATG 7 cut(s) 503, 549, 704, 741, 763, 804, 1001
Fsp4HI GCNGC 5 cut(s) 207, 210, 273, 390, 756
FspBI CTAG 2 cut(s) 828, 912
GluI GCNGC 5 cut(s) 207, 210, 273, 390, 756
GsaI CCCAGC 1 cut(s) 927
GsuI CTGGAG 1 cut(s) 1230
HaeIII GGCC 5 cut(s) 50, 140, 329, 928, 1118
HapII CCGG 3 cut(s) 137, 552, 1086
Hin1II CATG 4 cut(s) 412, 768, 1096, 1165
HindIII AAGCTT 1 cut(s) 578
HinfI GANTC 5 cut(s) 303, 790, 814, 1096, 1229
HpaII CCGG 3 cut(s) 137, 552, 1086
HphI GGTGA 4 cut(s) 126, 163, 571, 895
Hpy188I TCNGA 8 cut(s) 121, 230, 460, 705, 808, 871, 976, 1234
Hpy188III TCNNGA 2 cut(s) 726, 999
Hpy99I CGWCG 2 cut(s) 190, 1211
HpyAV CCTTC 3 cut(s) 116, 458, 700
HpyCH4III ACNGT 1 cut(s) 559
HpyCH4IV ACGT 2 cut(s) 185, 1016
HpyCH4V TGCA 5 cut(s) 212, 408, 412, 626, 1150
HpyF10VI GCNNNNNNNGC 8 cut(s) 206, 218, 317, 326, 335, 529, 849, 1262
HpyF3I CTNAG 6 cut(s) 234, 401, 528, 997, 1113, 1266
HpySE526I ACGT 2 cut(s) 185, 1016
Hsp92II CATG 4 cut(s) 412, 768, 1096, 1165
KspI CCGCGG 1 cut(s) 393
Kzo9I GATC 4 cut(s) 511, 650, 1001, 1234
LmnI GCTCC 2 cut(s) 159, 1218
Lsp1109I GCAGC 4 cut(s) 196, 218, 259, 767
MaeI CTAG 2 cut(s) 828, 912
MaeII ACGT 2 cut(s) 185, 1016
MaeIII GTNAC 7 cut(s) 132, 166, 394, 811, 889, 904, 1088
MalI GATC 4 cut(s) 513, 652, 1003, 1236
MboI GATC 4 cut(s) 511, 650, 1001, 1234
MboII GAAGA 9 cut(s) 82, 100, 166, 473, 797, 858, 951, 1002, 1011
MfeI CAATTG 2 cut(s) 621, 1135
MflI RGATCY 1 cut(s) 650
MhlI GDGCHC 1 cut(s) 448
MluCI AATT 5 cut(s) 55, 497, 621, 861, 1135
MlyI GAGTC 1 cut(s) 808
MmeI TCCRAC 1 cut(s) 716
MroXI GAANNNNTTC 1 cut(s) 789
MseI TTAA 2 cut(s) 519, 1143
MslI CAYNNNNRTG 1 cut(s) 403
MspA1I CMGCKG 2 cut(s) 209, 392
MspI CCGG 3 cut(s) 137, 552, 1086
MspR9I CCNGG 3 cut(s) 12, 552, 1086
MunI CAATTG 2 cut(s) 621, 1135
Mva1269I GAATGC 1 cut(s) 1156
MvaI CCWGG 1 cut(s) 12
MvnI CGCG 2 cut(s) 300, 392
MwoI GCNNNNNNNGC 8 cut(s) 206, 218, 317, 326, 335, 529, 849, 1262
NciI CCSGG 2 cut(s) 552, 1086
NcoI CCATGG 2 cut(s) 764, 1161
NdeII GATC 4 cut(s) 511, 650, 1001, 1234
NlaIII CATG 4 cut(s) 412, 768, 1096, 1165
NlaIV GGNNCC 1 cut(s) 161
NmuCI GTSAC 5 cut(s) 132, 166, 811, 889, 904
NspI RCATGY 1 cut(s) 412
OliI CACNNNNGTG 1 cut(s) 403
PaeI GCATGC 1 cut(s) 412
PaeR7I CTCGAG 1 cut(s) 435
PctI GAATGC 1 cut(s) 1156
PdmI GAANNNNTTC 1 cut(s) 789
PfeI GAWTC 4 cut(s) 303, 790, 1096, 1229
PflFI GACNNNGTC 1 cut(s) 184
PflMI CCANNNNNTGG 1 cut(s) 765
PfoI TCCNGGA 2 cut(s) 10, 550
PkrI GCNGC 5 cut(s) 208, 211, 274, 391, 757
PleI GAGTC 1 cut(s) 808
PpsI GAGTC 1 cut(s) 808
PpuMI RGGWCCY 1 cut(s) 253
Psp5II RGGWCCY 1 cut(s) 253
Psp6I CCWGG 1 cut(s) 10
PspEI GGTNACC 1 cut(s) 132
PspFI CCCAGC 1 cut(s) 923
PspGI CCWGG 1 cut(s) 10
PspN4I GGNNCC 1 cut(s) 161
PspPI GGNCC 3 cut(s) 253, 327, 926
PspPPI RGGWCCY 1 cut(s) 253
PspXI VCTCGAGB 1 cut(s) 435
PsuI RGATCY 1 cut(s) 650
PsyI GACNNNGTC 1 cut(s) 184
PvuII CAGCTG 1 cut(s) 209
RsaI GTAC 1 cut(s) 934
RsaNI GTAC 1 cut(s) 933
RseI CAYNNNNRTG 1 cut(s) 403
SacII CCGCGG 1 cut(s) 393
SaqAI TTAA 2 cut(s) 519, 1143
SatI GCNGC 5 cut(s) 207, 210, 273, 390, 756
Sau3AI GATC 4 cut(s) 511, 650, 1001, 1234
Sau96I GGNCC 3 cut(s) 253, 327, 926
SchI GAGTC 1 cut(s) 808
ScrFI CCNGG 3 cut(s) 12, 552, 1086
SduI GDGCHC 1 cut(s) 448
Sfr274I CTCGAG 1 cut(s) 435
Sfr303I CCGCGG 1 cut(s) 393
SgrBI CCGCGG 1 cut(s) 393
SinI GGWCC 1 cut(s) 253
SlaI CTCGAG 1 cut(s) 435
SmiMI CAYNNNNRTG 1 cut(s) 403
SmlI CTYRAG 3 cut(s) 257, 331, 435
SmoI CTYRAG 3 cut(s) 257, 331, 435
SphI GCATGC 1 cut(s) 412
Sse9I AATT 5 cut(s) 55, 497, 621, 861, 1135
SsiI CCGC 3 cut(s) 300, 390, 392
SspMI CTAG 2 cut(s) 828, 912
StyD4I CCNGG 3 cut(s) 10, 550, 1084
StyI CCWWGG 2 cut(s) 764, 1161
TaaI ACNGT 1 cut(s) 559
TaiI ACGT 2 cut(s) 188, 1019
TaqI TCGA 3 cut(s) 424, 436, 1282
TasI AATT 5 cut(s) 55, 497, 621, 861, 1135
TauI GCSGC 1 cut(s) 392
TfiI GAWTC 4 cut(s) 303, 790, 1096, 1229
Tru1I TTAA 2 cut(s) 519, 1143
Tru9I TTAA 2 cut(s) 519, 1143
TscAI CASTG 4 cut(s) 207, 345, 405, 850
TseFI GTSAC 5 cut(s) 132, 166, 811, 889, 904
TseI GCWGC 4 cut(s) 206, 209, 272, 755
Tsp45I GTSAC 5 cut(s) 132, 166, 811, 889, 904
TspDTI ATGAA 5 cut(s) 105, 210, 507, 782, 1109
TspRI CASTG 4 cut(s) 207, 345, 405, 850
Tth111I GACNNNGTC 1 cut(s) 184
Van91I CCANNNNNTGG 1 cut(s) 765
VpaK11BI GGWCC 1 cut(s) 253
XceI RCATGY 1 cut(s) 412
XhoI CTCGAG 1 cut(s) 435
XmnI GAANNNNTTC 1 cut(s) 789
XspI CTAG 2 cut(s) 828, 912
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.