Rmu_co8367643.1_g000001

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8367643.1
OG0008312
Physical Location & Seq
Reverse (-)
1 .. 471
471 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8367643.1_g000001.1.cds

Sequence Viewer

Length: 303 bp
atgggtactccaggaaaatggttcaagtccctcatcaatcccaaaaagcccataacaactgaccaagacaagggcaagaagaaatggaagctatggaggagttcatcggatgggttaggatcttctagtaaaggtggtgtgaagaaggtggcgggttcagagctgttggattctgcaaatgtagtcgatcatgagttggctgctgccatggctactctgcttcgggctcagcctaaagatttcaagatagtcaagcgagagtgggctgctattcggatccaaaccgtgtttcggggattcttg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IQ

Protein Analysis

101

Amino Acids

11.15

Weight (kDa)

10.29

Isoelectric Point (pI)

20.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 152
AclWI GGATC 3 cut(s) 127, 271, 284
AfaI GTAC 1 cut(s) 7
AfiI CCNNNNNNNGG 2 cut(s) 70, 291
AgsI TTSAA 2 cut(s) 25, 244
AjnI CCWGG 1 cut(s) 10
AjuI GAANNNNNNNTTGG 1 cut(s) 273
AluBI AGCT 2 cut(s) 91, 163
AluI AGCT 2 cut(s) 91, 163
AlwI GGATC 3 cut(s) 127, 271, 284
ApeKI GCWGC 3 cut(s) 200, 203, 266
BamHI GGATCC 1 cut(s) 276
BanII GRGCYC 1 cut(s) 229
BbvI GCAGC 3 cut(s) 187, 190, 253
BccI CCATC 1 cut(s) 104
BciT130I CCWGG 1 cut(s) 12
BfaI CTAG 1 cut(s) 126
BisI GCNGC 3 cut(s) 201, 204, 267
BlpI GCTNAGC 1 cut(s) 228
BlsI GCNGC 3 cut(s) 202, 205, 268
Bme1390I CCNGG 1 cut(s) 12
BmiI GGNNCC 1 cut(s) 278
BmrFI CCNGG 1 cut(s) 12
Bpu1102I GCTNAGC 1 cut(s) 228
BsaJI CCNNGG 1 cut(s) 207
Bsc4I CCNNNNNNNGG 2 cut(s) 70, 291
BseBI CCWGG 1 cut(s) 12
BseDI CCNNGG 1 cut(s) 207
BseGI GGATG 1 cut(s) 115
BseLI CCNNNNNNNGG 2 cut(s) 70, 291
BseMII CTCAG 1 cut(s) 242
BseRI GAGGAG 1 cut(s) 112
BseXI GCAGC 3 cut(s) 187, 190, 253
BslFI GGGAC 1 cut(s) 13
BslI CCNNNNNNNGG 2 cut(s) 70, 291
BsmFI GGGAC 1 cut(s) 13
Bsp1286I GDGCHC 1 cut(s) 229
Bsp143I GATC 3 cut(s) 119, 187, 276
Bsp1720I GCTNAGC 1 cut(s) 228
Bsp19I CCATGG 1 cut(s) 207
BspACI CCGC 1 cut(s) 152
BspCNI CTCAG 1 cut(s) 241
BspHI TCATGA 1 cut(s) 190
BspLI GGNNCC 1 cut(s) 278
BspPI GGATC 3 cut(s) 127, 271, 284
BssECI CCNNGG 1 cut(s) 207
BssMI GATC 3 cut(s) 119, 187, 276
BssT1I CCWWGG 1 cut(s) 207
Bst2UI CCWGG 1 cut(s) 12
Bst4CI ACNGT 1 cut(s) 286
BstDEI CTNAG 1 cut(s) 228
BstDSI CCRYGG 1 cut(s) 207
BstF5I GGATG 1 cut(s) 115
BstKTI GATC 3 cut(s) 122, 190, 279
BstMBI GATC 3 cut(s) 119, 187, 276
BstMWI GCNNNNNNNGC 1 cut(s) 209
BstNI CCWGG 1 cut(s) 12
BstSCI CCNGG 1 cut(s) 10
BstV1I GCAGC 3 cut(s) 187, 190, 253
BstX2I RGATCY 2 cut(s) 119, 276
BstXI CCANNNNNNTGG 1 cut(s) 18
BstYI RGATCY 2 cut(s) 119, 276
BtgI CCRYGG 1 cut(s) 207
BtsCI GGATG 1 cut(s) 115
CciI TCATGA 1 cut(s) 190
Csp6I GTAC 1 cut(s) 6
CviAII CATG 2 cut(s) 191, 208
CviJI RGCY 8 cut(s) 49, 91, 163, 200, 212, 227, 232, 266
CviKI_1 RGCY 8 cut(s) 49, 91, 163, 200, 212, 227, 232, 266
CviQI GTAC 1 cut(s) 6
DdeI CTNAG 1 cut(s) 228
DpnI GATC 3 cut(s) 121, 189, 278
DpnII GATC 3 cut(s) 119, 187, 276
Eco130I CCWWGG 1 cut(s) 207
Eco24I GRGCYC 1 cut(s) 229
EcoRII CCWGG 1 cut(s) 10
EcoT14I CCWWGG 1 cut(s) 207
EcoT38I GRGCYC 1 cut(s) 229
ErhI CCWWGG 1 cut(s) 207
FaeI CATG 2 cut(s) 194, 211
FaiI YATR 4 cut(s) 53, 94, 192, 209
FaqI GGGAC 1 cut(s) 13
FatI CATG 2 cut(s) 190, 207
FauI CCCGC 1 cut(s) 145
Fnu4HI GCNGC 3 cut(s) 201, 204, 267
FokI GGATG 1 cut(s) 122
FriOI GRGCYC 1 cut(s) 229
Fsp4HI GCNGC 3 cut(s) 201, 204, 267
FspBI CTAG 1 cut(s) 126
GluI GCNGC 3 cut(s) 201, 204, 267
Hin1II CATG 2 cut(s) 194, 211
HinfI GANTC 2 cut(s) 170, 297
Hpy188I TCNGA 3 cut(s) 109, 160, 276
Hpy188III TCNNGA 2 cut(s) 191, 244
HpyAV CCTTC 1 cut(s) 139
HpyCH4III ACNGT 1 cut(s) 286
HpyCH4V TGCA 1 cut(s) 176
HpyF10VI GCNNNNNNNGC 1 cut(s) 209
HpyF3I CTNAG 1 cut(s) 228
Hsp92II CATG 2 cut(s) 194, 211
Kzo9I GATC 3 cut(s) 119, 187, 276
LpnPI CCDG 1 cut(s) 24
Lsp1109I GCAGC 3 cut(s) 187, 190, 253
MaeI CTAG 1 cut(s) 126
MalI GATC 3 cut(s) 121, 189, 278
MboI GATC 3 cut(s) 119, 187, 276
MboII GAAGA 3 cut(s) 91, 114, 154
MflI RGATCY 2 cut(s) 119, 276
MhlI GDGCHC 1 cut(s) 229
MmeI TCCRAC 1 cut(s) 147
MnlI CCTC 2 cut(s) 41, 90
MspR9I CCNGG 1 cut(s) 12
MvaI CCWGG 1 cut(s) 12
MwoI GCNNNNNNNGC 1 cut(s) 209
NcoI CCATGG 1 cut(s) 207
NdeII GATC 3 cut(s) 119, 187, 276
NlaIII CATG 2 cut(s) 194, 211
NlaIV GGNNCC 1 cut(s) 278
PagI TCATGA 1 cut(s) 190
PfeI GAWTC 2 cut(s) 170, 297
PfoI TCCNGGA 1 cut(s) 10
PkrI GCNGC 3 cut(s) 202, 205, 268
Psp6I CCWGG 1 cut(s) 10
PspGI CCWGG 1 cut(s) 10
PspN4I GGNNCC 1 cut(s) 278
PsuI RGATCY 2 cut(s) 119, 276
RsaI GTAC 1 cut(s) 7
RsaNI GTAC 1 cut(s) 6
SatI GCNGC 3 cut(s) 201, 204, 267
Sau3AI GATC 3 cut(s) 119, 187, 276
ScrFI CCNGG 1 cut(s) 12
SduI GDGCHC 1 cut(s) 229
SetI ASST 4 cut(s) 93, 136, 150, 165
SsiI CCGC 1 cut(s) 152
SspMI CTAG 1 cut(s) 126
StyD4I CCNGG 1 cut(s) 10
StyI CCWWGG 1 cut(s) 207
TaaI ACNGT 1 cut(s) 286
TaqI TCGA 1 cut(s) 186
TfiI GAWTC 2 cut(s) 170, 297
TseI GCWGC 3 cut(s) 200, 203, 266
TspDTI ATGAA 1 cut(s) 93
XspI CTAG 1 cut(s) 126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.