Rmu_sc0032474.1_g000001

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0032474.1
Physical Location & Seq
Forward (+)
1 .. 5259
5259 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0032474.1_g000001.1.cds

Sequence Viewer

Length: 1246 bp
gactaacaagacagcaaaggttactaagagtccaagagtaggcaataacaattctgaatggaactggttagaaaattggatggcgaccaagccatgggaaaatagactgatggaggaggtccaaactgtgccgtcagagatgaatctttataattccaggaaaagtggagatgacattgctggcttttatccatgttcttcagaacagaactcagtgaaagtgcgaaggaatactgtcacaaccaggatttctgctaggccatctcaatcaatgagtccaataactcgctcgtcttctactccaagttctgattttctaagggacgagagctcgtcatccacttcatttacttctgcttctcctactatagcgtctagcaacgctaccaaggtagaggaaagtaatatgtgcaaaccaagctacatgaatctcacagagtcaattaaggcgaagaagagaagttccaatggtcaaaatatgcagaggtatttcatggaggagtatcagttccatagcaaagctctttctaatggggatacaaggagcatcaatggaggttctgatttttcggttaatttctgcaatgatctataccctccgtgtggacgtcgctcctccggccttgatcgagagtcgtcggagcagtgcagcttgccaaatggacaccgggggtctgcagtcgggtggagtcgtcggcgatcgttctatagcactgcacagaacttgcagttgcatgtgaggtggctgcccagaaatcggcaaccccgacctcctctgacctcgatcattgcccagaagaggtctgggacgcctccggcctccctcctgccagccccgcgccaccgtcgcaacctagaaccgcctgctgcgtcgacgtccacctgtgataggcctaaaaagtgtggacatccctcatccggcgtcgagaaggtggtgatcgttgcgctgcgggtgccaaacgcaccctctggacatcccagacagcctagatcacacggcgaaggcgaaggcgatcggaaactcggcgaagacgtctgggacgcctccggcctccatcaggccagccccgcgccaccgtcgccacctaaaagctcctgctgcgtcgacgtcagcactttttctgggttgcggatgtccgcttcagatccttcccgatatatgtgtgtgtgtgtgtgtaattgccagtttggaaggctctggcagattctgcgatggtggatcttacaatcccggcttcccgggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

414

Amino Acids

45.96

Weight (kDa)

9.72

Isoelectric Point (pI)

73.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 151
AatII GACGTC 4 cut(s) 611, 879, 1036, 1111
AccB1I GGYRCC 1 cut(s) 953
AccB7I CCANNNNNTGG 1 cut(s) 94
AccI GTMKAC 2 cut(s) 873, 1105
AccII CGCG 2 cut(s) 839, 1071
AciI CCGC 6 cut(s) 837, 861, 950, 1069, 1130, 1138
AclWI GGATC 2 cut(s) 1140, 1227
AcuI CTGAAG 2 cut(s) 184, 1126
AcyI GRCGYC 7 cut(s) 608, 810, 876, 922, 1033, 1042, 1108
AfiI CCNNNNNNNGG 8 cut(s) 39, 94, 603, 757, 799, 889, 918, 1058
AjnI CCWGG 2 cut(s) 156, 243
AloI GAACNNNNNNTCC 2 cut(s) 492, 524
AluBI AGCT 5 cut(s) 331, 421, 522, 652, 1093
AluI AGCT 5 cut(s) 331, 421, 522, 652, 1093
Alw21I GWGCWC 1 cut(s) 333
AlwI GGATC 2 cut(s) 1140, 1227
AlwNI CAGNNNCTG 1 cut(s) 1208
Ama87I CYCGRG 1 cut(s) 1239
AoxI GGCC 6 cut(s) 258, 620, 817, 891, 1049, 1060
ApeKI GCWGC 5 cut(s) 649, 746, 867, 947, 1099
AspLEI GCGC 3 cut(s) 841, 947, 1073
AspS9I GGNCC 1 cut(s) 119
AsuC2I CCSGG 4 cut(s) 669, 1232, 1240, 1241
AsuHPI GGTGA 1 cut(s) 947
AvaI CYCGRG 1 cut(s) 1239
AvaII GGWCC 1 cut(s) 119
BanI GGYRCC 1 cut(s) 953
BanII GRGCYC 1 cut(s) 333
BbsI GAAGAC 2 cut(s) 286, 1036
Bbv12I GWGCWC 1 cut(s) 333
BbvI GCAGC 5 cut(s) 661, 733, 854, 934, 1086
BccI CCATC 5 cut(s) 74, 104, 269, 1063, 1207
BceAI ACGGC 2 cut(s) 116, 1013
BciT130I CCWGG 2 cut(s) 158, 245
BciVI GTATCC 1 cut(s) 530
BcnI CCSGG 4 cut(s) 669, 1232, 1240, 1241
BfaI CTAG 4 cut(s) 256, 376, 855, 988
BfmI CTRYAG 3 cut(s) 367, 676, 707
BfuI GTATCC 1 cut(s) 530
BisI GCNGC 5 cut(s) 650, 747, 868, 948, 1100
BlsI GCNGC 5 cut(s) 651, 748, 869, 949, 1101
Bme1390I CCNGG 6 cut(s) 158, 245, 669, 1232, 1240, 1241
Bme18I GGWCC 1 cut(s) 119
BmeT110I CYCGRG 1 cut(s) 1239
BmgT120I GGNCC 1 cut(s) 119
BmiI GGNNCC 1 cut(s) 955
BmrFI CCNGG 6 cut(s) 158, 245, 669, 1232, 1240, 1241
BmsI GCATC 1 cut(s) 556
BpiI GAAGAC 2 cut(s) 286, 1036
BpuMI CCSGG 4 cut(s) 669, 1232, 1240, 1241
BsaHI GRCGYC 7 cut(s) 608, 810, 876, 922, 1033, 1042, 1108
BsaJI CCNNGG 4 cut(s) 93, 388, 668, 1239
BsaXI ACNNNNNCTCC 2 cut(s) 492, 522
Bsc4I CCNNNNNNNGG 8 cut(s) 39, 94, 603, 757, 799, 889, 918, 1058
Bse1I ACTGG 2 cut(s) 69, 1184
Bse3DI GCAATG 3 cut(s) 175, 590, 787
BseBI CCWGG 2 cut(s) 158, 245
BseDI CCNNGG 4 cut(s) 93, 388, 668, 1239
BseGI GGATG 6 cut(s) 85, 336, 908, 915, 974, 1138
BseLI CCNNNNNNNGG 8 cut(s) 39, 94, 603, 757, 799, 889, 918, 1058
BseMI GCAATG 3 cut(s) 175, 590, 787
BseMII CTCAG 1 cut(s) 226
BseNI ACTGG 2 cut(s) 69, 1184
BseRI GAGGAG 4 cut(s) 129, 513, 605, 763
BseXI GCAGC 5 cut(s) 661, 733, 854, 934, 1086
BsgI GTGCAG 2 cut(s) 668, 700
Bsh1236I CGCG 2 cut(s) 839, 1071
Bsh1285I CGRYCG 2 cut(s) 702, 1016
BshFI GGCC 6 cut(s) 260, 622, 819, 893, 1051, 1062
BshNI GGYRCC 1 cut(s) 953
BsiEI CGRYCG 2 cut(s) 702, 1016
BsiHKAI GWGCWC 1 cut(s) 333
BsiHKCI CYCGRG 1 cut(s) 1239
BsiSI CCGG 7 cut(s) 619, 668, 816, 919, 1048, 1232, 1240
BslFI GGGAC 3 cut(s) 336, 821, 1053
BslI CCNNNNNNNGG 8 cut(s) 39, 94, 603, 757, 799, 889, 918, 1058
BsmFI GGGAC 3 cut(s) 336, 821, 1053
BsnI GGCC 6 cut(s) 260, 622, 819, 893, 1051, 1062
BsoBI CYCGRG 1 cut(s) 1239
Bsp1286I GDGCHC 1 cut(s) 333
Bsp143I GATC 9 cut(s) 587, 626, 699, 784, 937, 990, 1013, 1145, 1219
Bsp19I CCATGG 1 cut(s) 93
BspACI CCGC 6 cut(s) 837, 861, 950, 1069, 1130, 1138
BspANI GGCC 6 cut(s) 260, 622, 819, 893, 1051, 1062
BspCNI CTCAG 1 cut(s) 225
BspFNI CGCG 2 cut(s) 839, 1071
BspLI GGNNCC 1 cut(s) 955
BspMAI CTGCAG 1 cut(s) 680
BspPI GGATC 2 cut(s) 1140, 1227
BspT107I GGYRCC 1 cut(s) 953
BsrDI GCAATG 3 cut(s) 175, 590, 787
BsrI ACTGG 2 cut(s) 69, 1184
BssECI CCNNGG 4 cut(s) 93, 388, 668, 1239
BssMI GATC 9 cut(s) 587, 626, 699, 784, 937, 990, 1013, 1145, 1219
BssNI GRCGYC 7 cut(s) 608, 810, 876, 922, 1033, 1042, 1108
BssT1I CCWWGG 2 cut(s) 93, 388
Bst2UI CCWGG 2 cut(s) 158, 245
Bst4CI ACNGT 4 cut(s) 128, 236, 846, 1078
Bst6I CTCTTC 2 cut(s) 450, 792
BstACI GRCGYC 7 cut(s) 608, 810, 876, 922, 1033, 1042, 1108
BstAPI GCANNNNNTGC 1 cut(s) 1208
BstC8I GCNNGC 5 cut(s) 182, 654, 832, 865, 1064
BstDEI CTNAG 3 cut(s) 25, 212, 318
BstDSI CCRYGG 1 cut(s) 93
BstENI CCTNNNNNAGG 2 cut(s) 887, 1056
BstF5I GGATG 6 cut(s) 85, 336, 908, 915, 974, 1138
BstFNI CGCG 2 cut(s) 839, 1071
BstHHI GCGC 3 cut(s) 841, 947, 1073
BstKTI GATC 9 cut(s) 590, 629, 702, 787, 940, 993, 1016, 1148, 1222
BstMBI GATC 9 cut(s) 587, 626, 699, 784, 937, 990, 1013, 1145, 1219
BstMCI CGRYCG 2 cut(s) 702, 1016
BstMWI GCNNNNNNNGC 9 cut(s) 418, 619, 836, 847, 953, 1068, 1079, 1099, 1208
BstNI CCWGG 2 cut(s) 158, 245
BstNSI RCATGY 1 cut(s) 738
BstSCI CCNGG 6 cut(s) 156, 243, 667, 1230, 1238, 1239
BstSFI CTRYAG 3 cut(s) 367, 676, 707
BstUI CGCG 2 cut(s) 839, 1071
BstV1I GCAGC 5 cut(s) 661, 733, 854, 934, 1086
BstV2I GAAGAC 2 cut(s) 286, 1036
BstX2I RGATCY 2 cut(s) 1145, 1219
BstYI RGATCY 2 cut(s) 1145, 1219
BsuI GTATCC 1 cut(s) 530
BsuRI GGCC 6 cut(s) 260, 622, 819, 893, 1051, 1062
BtgI CCRYGG 1 cut(s) 93
BtgZI GCGATG 1 cut(s) 1226
BtsCI GGATG 6 cut(s) 85, 336, 908, 915, 974, 1138
BtsI GCAGTG 2 cut(s) 651, 712
BtsIMutI CAGTG 3 cut(s) 220, 651, 712
Cac8I GCNNGC 5 cut(s) 182, 654, 832, 865, 1064
CaiI CAGNNNCTG 1 cut(s) 1208
CfoI GCGC 3 cut(s) 841, 947, 1073
Cfr13I GGNCC 1 cut(s) 119
Cfr9I CCCGGG 1 cut(s) 1239
CseI GACGC 6 cut(s) 361, 818, 859, 911, 1050, 1091
CviAII CATG 5 cut(s) 94, 193, 425, 494, 735
DdeI CTNAG 3 cut(s) 25, 212, 318
DpnI GATC 9 cut(s) 589, 628, 701, 786, 939, 992, 1015, 1147, 1221
DpnII GATC 9 cut(s) 587, 626, 699, 784, 937, 990, 1013, 1145, 1219
Eam1104I CTCTTC 2 cut(s) 450, 792
EarI CTCTTC 2 cut(s) 450, 792
Ecl136II GAGCTC 1 cut(s) 331
Eco130I CCWWGG 2 cut(s) 93, 388
Eco147I AGGCCT 1 cut(s) 893
Eco24I GRGCYC 1 cut(s) 333
Eco47I GGWCC 1 cut(s) 119
Eco53kI GAGCTC 1 cut(s) 331
Eco57I CTGAAG 2 cut(s) 184, 1126
Eco88I CYCGRG 1 cut(s) 1239
EcoICRI GAGCTC 1 cut(s) 331
EcoNI CCTNNNNNAGG 2 cut(s) 887, 1056
EcoRII CCWGG 2 cut(s) 156, 243
EcoT14I CCWWGG 2 cut(s) 93, 388
EcoT38I GRGCYC 1 cut(s) 333
ErhI CCWWGG 2 cut(s) 93, 388
FaeI CATG 5 cut(s) 97, 196, 428, 497, 738
FaqI GGGAC 3 cut(s) 336, 821, 1053
FatI CATG 5 cut(s) 93, 192, 424, 493, 734
FauI CCCGC 3 cut(s) 844, 943, 1076
FblI GTMKAC 2 cut(s) 873, 1105
Fnu4HI GCNGC 5 cut(s) 650, 747, 868, 948, 1100
FokI GGATG 6 cut(s) 92, 323, 895, 902, 961, 1145
FriOI GRGCYC 1 cut(s) 333
Fsp4HI GCNGC 5 cut(s) 650, 747, 868, 948, 1100
FspBI CTAG 4 cut(s) 256, 376, 855, 988
GlaI GCGC 3 cut(s) 840, 946, 1072
GluI GCNGC 5 cut(s) 650, 747, 868, 948, 1100
HaeIII GGCC 6 cut(s) 260, 622, 819, 893, 1051, 1062
HapII CCGG 7 cut(s) 619, 668, 816, 919, 1048, 1232, 1240
HgaI GACGC 6 cut(s) 361, 818, 859, 911, 1050, 1091
HhaI GCGC 3 cut(s) 841, 947, 1073
Hin1I GRCGYC 7 cut(s) 608, 810, 876, 922, 1033, 1042, 1108
Hin1II CATG 5 cut(s) 97, 196, 428, 497, 738
Hin6I GCGC 3 cut(s) 839, 945, 1071
HinP1I GCGC 3 cut(s) 839, 945, 1071
HincII GTYRAC 2 cut(s) 874, 1106
HindII GTYRAC 2 cut(s) 874, 1106
HinfI GANTC 8 cut(s) 29, 143, 275, 428, 438, 633, 689, 1205
HpaII CCGG 7 cut(s) 619, 668, 816, 919, 1048, 1232, 1240
HphI GGTGA 1 cut(s) 947
Hpy166II GTNNAC 5 cut(s) 606, 874, 880, 906, 1106
Hpy188I TCNGA 9 cut(s) 56, 137, 203, 311, 563, 641, 778, 1018, 1145
Hpy188III TCNNGA 4 cut(s) 630, 926, 970, 1153
Hpy8I GTNNAC 5 cut(s) 606, 874, 880, 906, 1106
HpyAV CCTTC 6 cut(s) 220, 923, 996, 1002, 1159, 1186
HpyCH4III ACNGT 4 cut(s) 128, 236, 846, 1078
HpyCH4IV ACGT 4 cut(s) 608, 876, 1033, 1108
HpyCH4V TGCA 8 cut(s) 412, 482, 583, 649, 678, 717, 728, 734
HpyF10VI GCNNNNNNNGC 9 cut(s) 418, 619, 836, 847, 953, 1068, 1079, 1099, 1208
HpyF3I CTNAG 3 cut(s) 25, 212, 318
HpySE526I ACGT 4 cut(s) 608, 876, 1033, 1108
Hsp92I GRCGYC 7 cut(s) 608, 810, 876, 922, 1033, 1042, 1108
Hsp92II CATG 5 cut(s) 97, 196, 428, 497, 738
HspAI GCGC 3 cut(s) 839, 945, 1071
Kzo9I GATC 9 cut(s) 587, 626, 699, 784, 937, 990, 1013, 1145, 1219
LmnI GCTCC 4 cut(s) 544, 618, 641, 1098
Lsp1109I GCAGC 5 cut(s) 661, 733, 854, 934, 1086
LweI GCATC 1 cut(s) 556
MaeI CTAG 4 cut(s) 256, 376, 855, 988
MaeII ACGT 4 cut(s) 608, 876, 1033, 1108
MaeIII GTNAC 2 cut(s) 20, 236
MalI GATC 9 cut(s) 589, 628, 701, 786, 939, 992, 1015, 1147, 1221
MboI GATC 9 cut(s) 587, 626, 699, 784, 937, 990, 1013, 1145, 1219
MboII GAAGA 6 cut(s) 190, 286, 464, 467, 809, 1041
MflI RGATCY 2 cut(s) 1145, 1219
MhlI GDGCHC 1 cut(s) 333
MluCI AATT 6 cut(s) 50, 74, 152, 442, 575, 1178
MlyI GAGTC 5 cut(s) 38, 284, 447, 642, 698
MmeI TCCRAC 1 cut(s) 619
MseI TTAA 2 cut(s) 445, 574
MspI CCGG 7 cut(s) 619, 668, 816, 919, 1048, 1232, 1240
MspR9I CCNGG 6 cut(s) 158, 245, 669, 1232, 1240, 1241
MvaI CCWGG 2 cut(s) 158, 245
MvnI CGCG 2 cut(s) 839, 1071
MwoI GCNNNNNNNGC 9 cut(s) 418, 619, 836, 847, 953, 1068, 1079, 1099, 1208
NciI CCSGG 4 cut(s) 669, 1232, 1240, 1241
NcoI CCATGG 1 cut(s) 93
NdeII GATC 9 cut(s) 587, 626, 699, 784, 937, 990, 1013, 1145, 1219
NlaIII CATG 5 cut(s) 97, 196, 428, 497, 738
NlaIV GGNNCC 1 cut(s) 955
NmeAIII GCCGAG 1 cut(s) 1003
NmuCI GTSAC 1 cut(s) 236
NspI RCATGY 1 cut(s) 738
PceI AGGCCT 1 cut(s) 893
PcsI WCGNNNNNNNCGW 3 cut(s) 764, 1003, 1030
PfeI GAWTC 3 cut(s) 143, 428, 1205
PflMI CCANNNNNTGG 1 cut(s) 94
PfoI TCCNGGA 1 cut(s) 156
PkrI GCNGC 5 cut(s) 651, 748, 869, 949, 1101
Ple19I CGATCG 2 cut(s) 702, 1016
PleI GAGTC 5 cut(s) 37, 283, 446, 641, 697
PpsI GAGTC 5 cut(s) 37, 283, 446, 641, 697
PsiI TTATAA 1 cut(s) 151
Psp124BI GAGCTC 1 cut(s) 333
Psp6I CCWGG 2 cut(s) 156, 243
PspGI CCWGG 2 cut(s) 156, 243
PspN4I GGNNCC 1 cut(s) 955
PspPI GGNCC 1 cut(s) 119
PstI CTGCAG 1 cut(s) 680
PstNI CAGNNNCTG 1 cut(s) 1208
PsuI RGATCY 2 cut(s) 1145, 1219
PvuI CGATCG 2 cut(s) 702, 1016
SacI GAGCTC 1 cut(s) 333
SalI GTCGAC 2 cut(s) 872, 1104
SaqAI TTAA 2 cut(s) 445, 574
SatI GCNGC 5 cut(s) 650, 747, 868, 948, 1100
Sau3AI GATC 9 cut(s) 587, 626, 699, 784, 937, 990, 1013, 1145, 1219
Sau96I GGNCC 1 cut(s) 119
SchI GAGTC 5 cut(s) 38, 284, 447, 642, 698
ScrFI CCNGG 6 cut(s) 158, 245, 669, 1232, 1240, 1241
SduI GDGCHC 1 cut(s) 333
SfaNI GCATC 1 cut(s) 556
SfcI CTRYAG 3 cut(s) 367, 676, 707
SgrDI CGTCGACG 2 cut(s) 872, 1104
SinI GGWCC 1 cut(s) 119
SmaI CCCGGG 1 cut(s) 1241
Sse9I AATT 6 cut(s) 50, 74, 152, 442, 575, 1178
SseBI AGGCCT 1 cut(s) 893
SsiI CCGC 6 cut(s) 837, 861, 950, 1069, 1130, 1138
SspMI CTAG 4 cut(s) 256, 376, 855, 988
SstI GAGCTC 1 cut(s) 333
StuI AGGCCT 1 cut(s) 893
StyD4I CCNGG 6 cut(s) 156, 243, 667, 1230, 1238, 1239
StyI CCWWGG 2 cut(s) 93, 388
TaaI ACNGT 4 cut(s) 128, 236, 846, 1078
TaiI ACGT 4 cut(s) 611, 879, 1036, 1111
TaqI TCGA 5 cut(s) 629, 783, 873, 925, 1105
TasI AATT 6 cut(s) 50, 74, 152, 442, 575, 1178
TfiI GAWTC 3 cut(s) 143, 428, 1205
Tru1I TTAA 2 cut(s) 445, 574
Tru9I TTAA 2 cut(s) 445, 574
TscAI CASTG 3 cut(s) 220, 651, 719
TseFI GTSAC 1 cut(s) 236
TseI GCWGC 5 cut(s) 649, 746, 867, 947, 1099
Tsp45I GTSAC 1 cut(s) 236
TspDTI ATGAA 4 cut(s) 156, 334, 441, 482
TspGWI ACGGA 1 cut(s) 589
TspMI CCCGGG 1 cut(s) 1239
TspRI CASTG 3 cut(s) 220, 651, 719
Van91I CCANNNNNTGG 1 cut(s) 94
VpaK11BI GGWCC 1 cut(s) 119
XagI CCTNNNNNAGG 2 cut(s) 887, 1056
XceI RCATGY 1 cut(s) 738
XcmI CCANNNNNNNNNTGG 1 cut(s) 801
XmaI CCCGGG 1 cut(s) 1239
XmiI GTMKAC 2 cut(s) 873, 1105
XspI CTAG 4 cut(s) 256, 376, 855, 988
ZraI GACGTC 4 cut(s) 609, 877, 1034, 1109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.