pycom07g10300

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0008312
Physical Location & Seq
Reverse (-)
10152505 .. 10153011
507 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g10300.1

Sequence Viewer

Length: 507 bp
ATGGAAGAGATTCAAAGTGTGCCATCAGAAGTGACTCCTCCTTATTCTCGTAGAAGTGATGGAAATGTGGGCTTTTATCCATTTTCTTCAGAACAGAACTCGGTGAAAGTGAGAAGGAACAATGTTACAACTAGGGTTTCTGCTAGGCCTCGTACAGCAAGTCCAATTACTCGCTCATCTTCTGCTCCGAGTTCTGATTCTGTACAGGATGATACCTCCGGATCAAATTCTTCTACGTCATCAACTTCAGTGTTTGGAAACTACTTAAAGGTAGAAAATGTAGAGGAAGCTAATGTAGGGAAAGCCGGTTACATGAATCTCACACAATCAACTATGGTCAAGCAGAGAACTTCCAATTGTTCTAATATCCAAAGGCATCCCATGAAGGAGTATCATTATCATAACAAGTCGATGGGATTTTTCAATGATGATACAAGGAGCAACGACGGTTCTGATCTGTATCCTCCAGTAGTCGCTTGTAGAGCTGAACGAGTTAGATATCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IQ

Protein Analysis

169

Amino Acids

18.71

Weight (kDa)

8.93

Isoelectric Point (pI)

73.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 218
AclWI GGATC 1 cut(s) 229
AcsI RAATTY 1 cut(s) 226
AcuI CTGAAG 2 cut(s) 72, 231
AfaI GTAC 2 cut(s) 154, 204
AgsI TTSAA 2 cut(s) 14, 424
AluBI AGCT 2 cut(s) 290, 485
AluI AGCT 2 cut(s) 290, 485
AlwI GGATC 1 cut(s) 229
Aor13HI TCCGGA 1 cut(s) 218
AoxI GGCC 1 cut(s) 146
ApoI RAATTY 1 cut(s) 226
Asp700I GAANNNNTTC 1 cut(s) 9
AsuHPI GGTGA 1 cut(s) 115
BccI CCATC 3 cut(s) 31, 53, 406
BciVI GTATCC 1 cut(s) 471
BfaI CTAG 2 cut(s) 132, 144
BfuI GTATCC 1 cut(s) 471
BmsI GCATC 1 cut(s) 385
BpmI CTGGAG 1 cut(s) 450
BsaBI GATNNNNATC 1 cut(s) 459
BsaWI WCCGGW 1 cut(s) 218
Bse118I RCCGGY 1 cut(s) 305
Bse1I ACTGG 1 cut(s) 467
Bse8I GATNNNNATC 1 cut(s) 459
BseAI TCCGGA 1 cut(s) 218
BseGI GGATG 2 cut(s) 214, 376
BseJI GATNNNNATC 1 cut(s) 459
BseNI ACTGG 1 cut(s) 467
BseRI GAGGAG 1 cut(s) 27
BshFI GGCC 1 cut(s) 148
BsiSI CCGG 2 cut(s) 219, 306
BsnI GGCC 1 cut(s) 148
Bsp13I TCCGGA 1 cut(s) 218
Bsp1407I TGTACA 1 cut(s) 202
Bsp143I GATC 2 cut(s) 221, 454
BspANI GGCC 1 cut(s) 148
BspEI TCCGGA 1 cut(s) 218
BspPI GGATC 1 cut(s) 229
BsrFI RCCGGY 1 cut(s) 305
BsrGI TGTACA 1 cut(s) 202
BsrI ACTGG 1 cut(s) 467
BssAI RCCGGY 1 cut(s) 305
BssMI GATC 2 cut(s) 221, 454
Bst4CI ACNGT 1 cut(s) 449
BstAUI TGTACA 1 cut(s) 202
BstF5I GGATG 2 cut(s) 214, 376
BstKTI GATC 2 cut(s) 224, 457
BstMBI GATC 2 cut(s) 221, 454
BstMWI GCNNNNNNNGC 1 cut(s) 482
BsuI GTATCC 1 cut(s) 471
BsuRI GGCC 1 cut(s) 148
BtsCI GGATG 2 cut(s) 214, 376
BtsIMutI CAGTG 1 cut(s) 255
Cfr10I RCCGGY 1 cut(s) 305
Csp6I GTAC 2 cut(s) 153, 203
CviAII CATG 2 cut(s) 313, 382
CviJI RGCY 5 cut(s) 72, 148, 290, 305, 485
CviKI_1 RGCY 5 cut(s) 72, 148, 290, 305, 485
CviQI GTAC 2 cut(s) 153, 203
DpnI GATC 2 cut(s) 223, 456
DpnII GATC 2 cut(s) 221, 454
Eco147I AGGCCT 1 cut(s) 148
Eco32I GATATC 1 cut(s) 500
Eco57I CTGAAG 2 cut(s) 72, 231
EcoRV GATATC 1 cut(s) 500
FaeI CATG 2 cut(s) 316, 385
FaiI YATR 4 cut(s) 314, 335, 383, 402
FatI CATG 2 cut(s) 312, 381
FokI GGATG 2 cut(s) 221, 363
FspBI CTAG 2 cut(s) 132, 144
GsuI CTGGAG 1 cut(s) 450
HaeIII GGCC 1 cut(s) 148
HapII CCGG 2 cut(s) 219, 306
Hin1II CATG 2 cut(s) 316, 385
HinfI GANTC 4 cut(s) 10, 34, 197, 316
HpaII CCGG 2 cut(s) 219, 306
HphI GGTGA 1 cut(s) 115
Hpy188I TCNGA 5 cut(s) 28, 91, 189, 196, 454
Hpy188III TCNNGA 1 cut(s) 219
Hpy99I CGWCG 1 cut(s) 449
HpyAV CCTTC 2 cut(s) 108, 379
HpyCH4III ACNGT 1 cut(s) 449
HpyCH4IV ACGT 1 cut(s) 236
HpyF10VI GCNNNNNNNGC 1 cut(s) 482
HpySE526I ACGT 1 cut(s) 236
Hsp92II CATG 2 cut(s) 316, 385
Kpn2I TCCGGA 1 cut(s) 218
Kzo9I GATC 2 cut(s) 221, 454
LmnI GCTCC 2 cut(s) 190, 438
LpnPI CCDG 4 cut(s) 191, 232, 319, 480
LweI GCATC 1 cut(s) 385
MaeI CTAG 2 cut(s) 132, 144
MaeII ACGT 1 cut(s) 236
MaeIII GTNAC 3 cut(s) 31, 124, 308
MalI GATC 2 cut(s) 223, 456
MboI GATC 2 cut(s) 221, 454
MboII GAAGA 4 cut(s) 17, 78, 171, 222
MfeI CAATTG 1 cut(s) 355
MluCI AATT 3 cut(s) 165, 226, 355
MlyI GAGTC 1 cut(s) 28
MnlI CCTC 5 cut(s) 48, 159, 226, 277, 474
MroI TCCGGA 1 cut(s) 218
MroXI GAANNNNTTC 1 cut(s) 9
MseI TTAA 1 cut(s) 266
MspI CCGG 2 cut(s) 219, 306
MunI CAATTG 1 cut(s) 355
MwoI GCNNNNNNNGC 1 cut(s) 482
NdeII GATC 2 cut(s) 221, 454
NlaIII CATG 2 cut(s) 316, 385
NmuCI GTSAC 1 cut(s) 31
PceI AGGCCT 1 cut(s) 148
PdmI GAANNNNTTC 1 cut(s) 9
PfeI GAWTC 3 cut(s) 10, 197, 316
PleI GAGTC 1 cut(s) 28
PpsI GAGTC 1 cut(s) 28
RsaI GTAC 2 cut(s) 154, 204
RsaNI GTAC 2 cut(s) 153, 203
SaqAI TTAA 1 cut(s) 266
Sau3AI GATC 2 cut(s) 221, 454
SchI GAGTC 1 cut(s) 28
SetI ASST 5 cut(s) 218, 239, 273, 292, 487
SfaNI GCATC 1 cut(s) 385
Sse9I AATT 3 cut(s) 165, 226, 355
SseBI AGGCCT 1 cut(s) 148
SspMI CTAG 2 cut(s) 132, 144
StuI AGGCCT 1 cut(s) 148
TaaI ACNGT 1 cut(s) 449
TaiI ACGT 1 cut(s) 239
TaqI TCGA 1 cut(s) 410
TasI AATT 3 cut(s) 165, 226, 355
TatI WGTACW 1 cut(s) 202
TfiI GAWTC 3 cut(s) 10, 197, 316
Tru1I TTAA 1 cut(s) 266
Tru9I TTAA 1 cut(s) 266
TscAI CASTG 1 cut(s) 255
TseFI GTSAC 1 cut(s) 31
Tsp45I GTSAC 1 cut(s) 31
TspDTI ATGAA 2 cut(s) 329, 398
TspRI CASTG 1 cut(s) 255
XapI RAATTY 1 cut(s) 226
XmnI GAANNNNTTC 1 cut(s) 9
XspI CTAG 2 cut(s) 132, 144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.