Rh2DG455000

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
65816556 .. 65818180
1625 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG455000.1

Sequence Viewer

Length: 387 bp
ATGGCTACTCTGCTTCGGGCTCAGCCTAAAGATTTCAAGATAGTCAAGCGAGAGTGGGCTGCTATTCGGATCCAAACCGTGTTTCGGGGATTCTTGGCAAGGCAGGCTTTAAGGGCCTTGAAAGCATTAGTAAGGCTTCAAGCTATATTTCGTGGGAGGCGGGTCAGGAAGCAAGCAGCTGTTACATTGAGGTGCATGCAGGCACTTGTTCGAGTTCAGACTCGAGTTCGAGCACAGAGATCCTCAGAAGCTGCACAAGACTTGCTGGATGAACGTCAGTCCCAAGCTGATGATCCCGTTAAGCAGGCTGAGCAAGGATGGTGTGATAGTCCAGGAACAGTGAGTGAAGTTAGAGCAAAGCTACAAATGAGGCAAAGAGGAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

128

Amino Acids

14.66

Weight (kDa)

11.65

Isoelectric Point (pI)

51.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 160
AclWI GGATC 4 cut(s) 64, 77, 234, 287
AfiI CCNNNNNNNGG 1 cut(s) 84
AgsI TTSAA 3 cut(s) 37, 121, 140
AjnI CCWGG 1 cut(s) 331
AjuI GAANNNNNNNTTGG 2 cut(s) 66, 98
AluBI AGCT 5 cut(s) 143, 179, 251, 287, 361
AluI AGCT 5 cut(s) 143, 179, 251, 287, 361
Alw21I GWGCWC 1 cut(s) 235
AlwI GGATC 4 cut(s) 64, 77, 234, 287
AlwNI CAGNNNCTG 1 cut(s) 251
Ama87I CYCGRG 1 cut(s) 222
AoxI GGCC 1 cut(s) 114
ApeKI GCWGC 3 cut(s) 59, 176, 251
AspS9I GGNCC 1 cut(s) 114
AvaI CYCGRG 1 cut(s) 222
BamHI GGATCC 1 cut(s) 69
BanII GRGCYC 1 cut(s) 22
Bbv12I GWGCWC 1 cut(s) 235
BbvI GCAGC 3 cut(s) 46, 188, 238
BccI CCATC 1 cut(s) 312
BciT130I CCWGG 1 cut(s) 333
BisI GCNGC 3 cut(s) 60, 177, 252
BlpI GCTNAGC 2 cut(s) 21, 309
BlsI GCNGC 3 cut(s) 61, 178, 253
Bme1390I CCNGG 1 cut(s) 333
BmeT110I CYCGRG 1 cut(s) 222
BmgT120I GGNCC 1 cut(s) 114
BmiI GGNNCC 1 cut(s) 71
BmrFI CCNGG 1 cut(s) 333
Bpu1102I GCTNAGC 2 cut(s) 21, 309
Bsc4I CCNNNNNNNGG 1 cut(s) 84
BseBI CCWGG 1 cut(s) 333
BseGI GGATG 2 cut(s) 274, 323
BseLI CCNNNNNNNGG 1 cut(s) 84
BseMII CTCAG 3 cut(s) 35, 258, 300
BseXI GCAGC 3 cut(s) 46, 188, 238
BsgI GTGCAG 1 cut(s) 237
BshFI GGCC 1 cut(s) 116
BsiHKAI GWGCWC 1 cut(s) 235
BsiHKCI CYCGRG 1 cut(s) 222
BslFI GGGAC 1 cut(s) 265
BslI CCNNNNNNNGG 1 cut(s) 84
BsmFI GGGAC 1 cut(s) 265
BsnI GGCC 1 cut(s) 116
BsoBI CYCGRG 1 cut(s) 222
Bsp1286I GDGCHC 2 cut(s) 22, 235
Bsp143I GATC 3 cut(s) 69, 239, 292
Bsp1720I GCTNAGC 2 cut(s) 21, 309
BspACI CCGC 1 cut(s) 160
BspANI GGCC 1 cut(s) 116
BspCNI CTCAG 3 cut(s) 34, 257, 301
BspLI GGNNCC 1 cut(s) 71
BspPI GGATC 4 cut(s) 64, 77, 234, 287
BssMI GATC 3 cut(s) 69, 239, 292
Bst2UI CCWGG 1 cut(s) 333
Bst4CI ACNGT 2 cut(s) 79, 340
BstC8I GCNNGC 5 cut(s) 105, 174, 197, 201, 306
BstDEI CTNAG 3 cut(s) 21, 244, 309
BstF5I GGATG 2 cut(s) 274, 323
BstKTI GATC 3 cut(s) 72, 242, 295
BstMBI GATC 3 cut(s) 69, 239, 292
BstMWI GCNNNNNNNGC 4 cut(s) 104, 113, 122, 310
BstNI CCWGG 1 cut(s) 333
BstNSI RCATGY 1 cut(s) 199
BstSCI CCNGG 1 cut(s) 331
BstV1I GCAGC 3 cut(s) 46, 188, 238
BstX2I RGATCY 2 cut(s) 69, 239
BstYI RGATCY 2 cut(s) 69, 239
BsuRI GGCC 1 cut(s) 116
BtsCI GGATG 2 cut(s) 274, 323
BtsIMutI CAGTG 1 cut(s) 345
Cac8I GCNNGC 5 cut(s) 105, 174, 197, 201, 306
CaiI CAGNNNCTG 1 cut(s) 251
Cfr13I GGNCC 1 cut(s) 114
CviAII CATG 1 cut(s) 196
DdeI CTNAG 3 cut(s) 21, 244, 309
DpnI GATC 3 cut(s) 71, 241, 294
DpnII GATC 3 cut(s) 69, 239, 292
Eco24I GRGCYC 1 cut(s) 22
Eco88I CYCGRG 1 cut(s) 222
EcoO109I RGGNCCY 1 cut(s) 114
EcoRII CCWGG 1 cut(s) 331
EcoT38I GRGCYC 1 cut(s) 22
FaeI CATG 1 cut(s) 199
FaiI YATR 3 cut(s) 146, 197, 385
FalI AAGNNNNNCTT 2 cut(s) 91, 123
FaqI GGGAC 1 cut(s) 265
FatI CATG 1 cut(s) 195
FauI CCCGC 1 cut(s) 153
Fnu4HI GCNGC 3 cut(s) 60, 177, 252
FokI GGATG 2 cut(s) 281, 330
FriOI GRGCYC 1 cut(s) 22
Fsp4HI GCNGC 3 cut(s) 60, 177, 252
GluI GCNGC 3 cut(s) 60, 177, 252
HaeIII GGCC 1 cut(s) 116
Hin1II CATG 1 cut(s) 199
HinfI GANTC 2 cut(s) 90, 220
Hpy188I TCNGA 3 cut(s) 69, 219, 247
Hpy188III TCNNGA 2 cut(s) 37, 166
HpyCH4III ACNGT 2 cut(s) 79, 340
HpyCH4IV ACGT 1 cut(s) 274
HpyCH4V TGCA 3 cut(s) 195, 199, 254
HpyF10VI GCNNNNNNNGC 4 cut(s) 104, 113, 122, 310
HpyF3I CTNAG 3 cut(s) 21, 244, 309
HpySE526I ACGT 1 cut(s) 274
Hsp92II CATG 1 cut(s) 199
Kzo9I GATC 3 cut(s) 69, 239, 292
LpnPI CCDG 7 cut(s) 89, 151, 185, 251, 290, 318, 345
Lsp1109I GCAGC 3 cut(s) 46, 188, 238
MaeII ACGT 1 cut(s) 274
MaeIII GTNAC 1 cut(s) 181
MalI GATC 3 cut(s) 71, 241, 294
MboI GATC 3 cut(s) 69, 239, 292
MflI RGATCY 2 cut(s) 69, 239
MhlI GDGCHC 2 cut(s) 22, 235
MlyI GAGTC 1 cut(s) 214
MnlI CCTC 5 cut(s) 150, 183, 253, 363, 371
MseI TTAA 2 cut(s) 110, 300
MslI CAYNNNNRTG 1 cut(s) 190
MspA1I CMGCKG 1 cut(s) 179
MspR9I CCNGG 1 cut(s) 333
MvaI CCWGG 1 cut(s) 333
MwoI GCNNNNNNNGC 4 cut(s) 104, 113, 122, 310
NdeII GATC 3 cut(s) 69, 239, 292
NlaIII CATG 1 cut(s) 199
NlaIV GGNNCC 1 cut(s) 71
NspI RCATGY 1 cut(s) 199
PaeI GCATGC 1 cut(s) 199
PaeR7I CTCGAG 1 cut(s) 222
PfeI GAWTC 1 cut(s) 90
PfoI TCCNGGA 1 cut(s) 331
PkrI GCNGC 3 cut(s) 61, 178, 253
PleI GAGTC 1 cut(s) 214
PpsI GAGTC 1 cut(s) 214
Psp6I CCWGG 1 cut(s) 331
PspGI CCWGG 1 cut(s) 331
PspN4I GGNNCC 1 cut(s) 71
PspPI GGNCC 1 cut(s) 114
PspXI VCTCGAGB 1 cut(s) 222
PstNI CAGNNNCTG 1 cut(s) 251
PsuI RGATCY 2 cut(s) 69, 239
PvuII CAGCTG 1 cut(s) 179
RseI CAYNNNNRTG 1 cut(s) 190
SaqAI TTAA 2 cut(s) 110, 300
SatI GCNGC 3 cut(s) 60, 177, 252
Sau3AI GATC 3 cut(s) 69, 239, 292
Sau96I GGNCC 1 cut(s) 114
SchI GAGTC 1 cut(s) 214
ScrFI CCNGG 1 cut(s) 333
SduI GDGCHC 2 cut(s) 22, 235
SetI ASST 7 cut(s) 145, 181, 194, 253, 277, 289, 363
Sfr274I CTCGAG 1 cut(s) 222
SlaI CTCGAG 1 cut(s) 222
SmiMI CAYNNNNRTG 1 cut(s) 190
SmlI CTYRAG 1 cut(s) 222
SmoI CTYRAG 1 cut(s) 222
SphI GCATGC 1 cut(s) 199
SsiI CCGC 1 cut(s) 160
StyD4I CCNGG 1 cut(s) 331
TaaI ACNGT 2 cut(s) 79, 340
TaiI ACGT 1 cut(s) 277
TaqI TCGA 3 cut(s) 211, 223, 229
TfiI GAWTC 1 cut(s) 90
Tru1I TTAA 2 cut(s) 110, 300
Tru9I TTAA 2 cut(s) 110, 300
TscAI CASTG 1 cut(s) 345
TseI GCWGC 3 cut(s) 59, 176, 251
TspDTI ATGAA 1 cut(s) 285
TspRI CASTG 1 cut(s) 345
XceI RCATGY 1 cut(s) 199
XhoI CTCGAG 1 cut(s) 222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.