MD09G1249100.v1.1

Cell division control protein 48 homolog C-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0007658
Physical Location & Seq
Reverse (-)
31841992 .. 31847305
5314 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1249100.v1.1.491

Sequence Viewer

Length: 2472 bp
ATGAAGAAAACTGGGAGAAAGTTCGACGGAGAAGGGAGGTCCCTCTCCGACCAAAAGCAGAAGGTTCTCCGTTGTCGTCTGGAGACCTTCAAGCACCTCCGCTCCACCTCTCTCGACGAAATCGTCGACAAACTTCGCACTAATTACAAAGACTACCACCGCATCAAGCTCCAGTCTTTCATCAAGTTGGTCCAGAAAACCCTAGACTCGCCTTCCTTCAAGCAATCCAAAACCCTAATCCATGTCAGCGACCTAGAAGACGACGAAGACGAAGATGAAGAAGTGGACCATAGCAATTCCAAGAGACGGCGGAGGGCCACTAAAATGGAGGAGAGATTGCAGCGGATAGACACTGCGCACGTCAGAAGGATTCGCCAAAGCAATGGTGACCGTCAATCTACATCGTCTGATGATGATTATGAGGAGGAGGCGTTGTCGACATTGGACGACGCCATATATAGCGAGAATGTGGAACCGAAGTTTGATGTGATGAAATCGAGCCTCCGAGCATCGTATATGGGATCCAACAGTGCCTTGAAGCCCAAGGCGCCCGAGGACCAGAAGGAGAAGAATGTAGAAATTGAGCTTCCTGGTCGCGAGAAAGTTGGGTTGATGAGCGGAAACGGAGGGCAAGGGGGGCGAGAAACATTTCAGGAACCTGAAGCCAAGGGATCGGTTTCCAGAGGTGTTGAGGTGAAGGGGAGTGAGGGGCCGAGGTTTAGAGACTTGGGTGGGTTGGAGAAGGTGATAGAGGAGCTGAAGATGGAGGTGATTGTGCCGCTTCGCCATCCGGAGCTCCCACGGTGGCTCGGAGTTAGGCCAATGTCTGGGATTCTGTTGTATGGCCCGCCCGGGTGTGGCAAGACCAAATTAGCTCATGCCATTGCCAATGAAACCGGCATTCCCTTCTATAGGATTTCTGCCACCGAAGTAGTCTCTGGTGTTTCAGGTGCATCTGAAGAAAATATACGAGATCTTTTTTCTAAAGCTTACAGAACTGCCCCTTCAATTGTATTTATTGATGAAATTGATGCAATTGCTTCGAAAAGAGAGAGTTTGCAGCGTGAGATGGAGAGGCGAATTGTCACACAACTAATGACTTGTATGGATGAATCTCATAGGCTTGTACAACGGGCTGATGAAGATTCCAACTCGCAAATTTCAGATAACAAGTCTGGCTATGTTCTTGTAATTGGAGCAACCAATAGGCCTGATGCTGTTGACCATGCTTTAAGGAGACCTGGCCGATTTGACCGTGAGATTGTTTTAGGCGTTCCAGATGAAAATGCTAGGGTTAAGATTCTTTCTGTACTTACTCGCAATCTAAAACTTGAAGGTTCTTTTGATCTTCTTAAAATAGCCAGGTCTACACCAGGGTTTGTTGGGGCTGATTTGAAAGCCCTGGCTGACAGGGCCGGTAATATTGCCATGAAAAGGATTATACACAAGAGGAAGACTGATATGTATATAGATACTATGGACGAGGAATGCAATGAAGAGTGGTGGATGCAACCATGGTTGCCTGAAGAAATGGAAAAGCTCAGTATTATTATGGCTGATTTTGAGGAAGCAGTTGAAGTGGTTCAGCCCTCGTCCAAAAGAGAAGGGTTCTCTGCAATTCCTAATGTAAAATGGGAAGATGTTGGTGGGTTAGATCTTTTAAGGGAGGAATTTGATCGCTATATTGTTAGGCGTGTTAAATATCCTGAGAACTATGAGGAATTTGGAGTAGATTTAGAAACAGGATTTCTGCTCTATGGGCCTCCTGGATGTGGTAAAACACTGATAGCAAAGGCTGTCGCTAATGAAGCAGGAGCAAATTTCATTCACATTAAGGGCCCTGAACTTTTGAATAAATATGTTGGAGAAAGTGAGTTGGCAGTTCGGACATTGTTTAGTCGCGCGAGGACATGCTCACCGTGTATACTTTTCTTTGATGAGGTGGATGCTTTAACAACAAAGAGGGGGAAAGAAGGGGGATGGGTTATTGAGCGGCTACTGAACCAGCTACTTATAGAGTTAGATGGCGCAGAGCAGCGACGAGGTGTATTTGTAATTGGTGCCACTAATAGACCCGATGTAATGGACCGTGCTGTTCTGCGGCCTGGTAGATTTGGTAAACTTATTTATGTCGCCCCTCCCACAAAAGATGAGCGTGGTTTGATCTTGAAAGCTCTTGCAAGGAAGAAGCCTATTGATGCCAGTGTAGATTTGAGTGAGATTGGACAAAGGGAAACATGTGAAAATTTTAGTGGAGCAGATCTTGCTGCACTGATGAATGAAGCTGCTATGGCTGCTCTTGAAGAGAAATTGACATTGCCTGAGAGGAGTTCAGATGCATCTCATTGGACGATAAAAGAATCTCACTTTGAGCAAGCACTGGCTAAGATGGCACCATCTGTAACTGACCAGCAAATGCAATACTACCAGAGATTTGGTGAGAGCCTCAAAGCACCAAGAAACAAAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
AAA Nucleolin_bd

Protein Analysis

824

Amino Acids

92.79

Weight (kDa)

5.94

Isoelectric Point (pI)

49.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RuvB_N PF05496 275 - 358 2.4e-06 Holliday junction DNA helicase RuvB P-loop domain
AAA PF00004 278 - 424 7.6e-41 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 448 - 483 8.2e-10 AAA+ lid domain
AAA PF00004 584 - 711 2.8e-42 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 735 - 772 2.9e-09 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 122
Acc16I TGCGCA 1 cut(s) 357
AccB1I GGYRCC 3 cut(s) 547, 2060, 2392
AccB7I CCANNNNNTGG 1 cut(s) 827
AccBSI CCGCTC 3 cut(s) 102, 618, 1993
AccI GTMKAC 4 cut(s) 126, 437, 1367, 1924
AccII CGCG 3 cut(s) 597, 1902, 1904
AccIII TCCGGA 1 cut(s) 790
AciI CCGC 9 cut(s) 100, 160, 310, 343, 618, 779, 848, 1993, 2101
AclWI GGATC 3 cut(s) 516, 529, 679
AcoI YGGCCR 1 cut(s) 1243
AcsI RAATTY 5 cut(s) 1158, 1670, 1721, 1819, 2245
AcuI CTGAAG 4 cut(s) 681, 779, 978, 1545
AcyI GRCGYC 2 cut(s) 450, 548
AfaI GTAC 2 cut(s) 1128, 1311
AfiI CCNNNNNNNGG 6 cut(s) 306, 827, 857, 912, 1434, 1772
AflIII ACRYGT 1 cut(s) 2237
AjiI CACGTC 1 cut(s) 361
AjnI CCWGG 7 cut(s) 589, 1240, 1361, 1372, 1401, 1765, 2104
Alw21I GWGCWC 1 cut(s) 798
Alw26I GTCTC 5 cut(s) 77, 298, 717, 940, 1231
AlwI GGATC 3 cut(s) 516, 529, 679
Ama87I CYCGRG 2 cut(s) 551, 851
Aor13HI TCCGGA 1 cut(s) 790
ApaI GGGCCC 1 cut(s) 1841
ApeKI GCWGC 6 cut(s) 340, 1060, 2035, 2267, 2285, 2294
ApoI RAATTY 5 cut(s) 1158, 1670, 1721, 1819, 2245
Asp700I GAANNNNTTC 2 cut(s) 648, 1581
AspLEI GCGC 4 cut(s) 358, 550, 1904, 2030
AsuC2I CCSGG 2 cut(s) 852, 853
AsuHPI GGTGA 6 cut(s) 398, 706, 757, 781, 1908, 2450
AsuII TTCGAA 1 cut(s) 1043
AvaI CYCGRG 2 cut(s) 551, 851
AvaII GGWCC 5 cut(s) 39, 190, 286, 556, 2086
BaeGI GKGCMC 1 cut(s) 1841
BamHI GGATCC 1 cut(s) 521
BanI GGYRCC 3 cut(s) 547, 2060, 2392
BanII GRGCYC 2 cut(s) 798, 1841
BarI GAAGNNNNNNTAC 2 cut(s) 951, 983
BbsI GAAGAC 3 cut(s) 264, 273, 1460
Bbv12I GWGCWC 1 cut(s) 798
BbvI GCAGC 6 cut(s) 352, 1072, 2047, 2254, 2272, 2281
BccI CCATC 7 cut(s) 757, 795, 1063, 1974, 2018, 2383, 2404
BceAI ACGGC 1 cut(s) 323
BcgI CGANNNNNNTGC 2 cut(s) 1023, 1057
BciT130I CCWGG 7 cut(s) 591, 1242, 1363, 1374, 1403, 1767, 2106
BcnI CCSGG 2 cut(s) 852, 853
BcoDI GTCTC 5 cut(s) 77, 298, 717, 940, 1231
BfaI CTAG 3 cut(s) 203, 254, 1290
BfmI CTRYAG 1 cut(s) 910
BfoI RGCGCY 1 cut(s) 551
BglII AGATCT 3 cut(s) 973, 1654, 2260
BisI GCNGC 9 cut(s) 341, 779, 1061, 1994, 2036, 2102, 2268, 2286, 2295
BlsI GCNGC 9 cut(s) 342, 780, 1062, 1995, 2037, 2103, 2269, 2287, 2296
Bme1390I CCNGG 9 cut(s) 591, 852, 853, 1242, 1363, 1374, 1403, 1767, 2106
Bme18I GGWCC 5 cut(s) 39, 190, 286, 556, 2086
BmeT110I CYCGRG 2 cut(s) 551, 851
BmgBI CACGTC 1 cut(s) 361
BmiI GGNNCC 9 cut(s) 41, 474, 523, 549, 657, 711, 1839, 2062, 2394
BmrFI CCNGG 9 cut(s) 591, 852, 853, 1242, 1363, 1374, 1403, 1767, 2106
BmrI ACTGGG 1 cut(s) 21
BmuI ACTGGG 1 cut(s) 21
BpiI GAAGAC 3 cut(s) 264, 273, 1460
BpmI CTGGAG 2 cut(s) 101, 155
Bpu14I TTCGAA 1 cut(s) 1043
BpuMI CCSGG 2 cut(s) 852, 853
BsaHI GRCGYC 2 cut(s) 450, 548
BsaI GGTCTC 2 cut(s) 77, 1231
BsaJI CCNNGG 9 cut(s) 543, 552, 666, 713, 800, 851, 1373, 1401, 1514
BsaWI WCCGGW 1 cut(s) 790
BsaXI ACNNNNNCTCC 6 cut(s) 86, 116, 416, 419, 446, 449
Bsc4I CCNNNNNNNGG 6 cut(s) 306, 827, 857, 912, 1434, 1772
Bse118I RCCGGY 2 cut(s) 896, 1415
Bse1I ACTGG 4 cut(s) 16, 172, 2202, 2385
Bse3DI GCAATG 4 cut(s) 388, 882, 1498, 2315
BseAI TCCGGA 1 cut(s) 790
BseBI CCWGG 7 cut(s) 591, 1242, 1363, 1374, 1403, 1767, 2106
BseDI CCNNGG 9 cut(s) 543, 552, 666, 713, 800, 851, 1373, 1401, 1514
BseGI GGATG 6 cut(s) 787, 1114, 1512, 1775, 1951, 1985
BseLI CCNNNNNNNGG 6 cut(s) 306, 827, 857, 912, 1434, 1772
BseMI GCAATG 4 cut(s) 388, 882, 1498, 2315
BseMII CTCAG 3 cut(s) 1555, 1698, 2313
BseNI ACTGG 4 cut(s) 16, 172, 2202, 2385
BseRI GAGGAG 5 cut(s) 344, 437, 440, 767, 2341
BseSI GKGCMC 1 cut(s) 1841
BseXI GCAGC 6 cut(s) 352, 1072, 2047, 2254, 2272, 2281
BsgI GTGCAG 1 cut(s) 2253
Bsh1236I CGCG 3 cut(s) 597, 1902, 1904
BshNI GGYRCC 3 cut(s) 547, 2060, 2392
BsiHKAI GWGCWC 1 cut(s) 798
BsiHKCI CYCGRG 2 cut(s) 551, 851
BsiSI CCGG 4 cut(s) 791, 852, 897, 1416
BslFI GGGAC 1 cut(s) 25
BslI CCNNNNNNNGG 6 cut(s) 306, 827, 857, 912, 1434, 1772
BsmAI GTCTC 5 cut(s) 77, 298, 717, 940, 1231
BsmBI CGTCTC 1 cut(s) 298
BsmFI GGGAC 1 cut(s) 25
BsmI GAATGC 2 cut(s) 900, 1493
Bso31I GGTCTC 2 cut(s) 77, 1231
BsoBI CYCGRG 2 cut(s) 551, 851
Bsp119I TTCGAA 1 cut(s) 1043
Bsp120I GGGCCC 1 cut(s) 1837
Bsp1286I GDGCHC 2 cut(s) 798, 1841
Bsp13I TCCGGA 1 cut(s) 790
Bsp1407I TGTACA 1 cut(s) 1126
Bsp143I GATC 8 cut(s) 521, 671, 973, 1345, 1654, 1675, 2163, 2260
Bsp19I CCATGG 1 cut(s) 1514
Bsp68I TCGCGA 1 cut(s) 597
BspACI CCGC 9 cut(s) 100, 160, 310, 343, 618, 779, 848, 1993, 2101
BspCNI CTCAG 3 cut(s) 1554, 1699, 2314
BspEI TCCGGA 1 cut(s) 790
BspFNI CGCG 3 cut(s) 597, 1902, 1904
BspLI GGNNCC 9 cut(s) 41, 474, 523, 549, 657, 711, 1839, 2062, 2394
BspPI GGATC 3 cut(s) 516, 529, 679
BspT104I TTCGAA 1 cut(s) 1043
BspT107I GGYRCC 3 cut(s) 547, 2060, 2392
BspTNI GGTCTC 2 cut(s) 77, 1231
BsrBI CCGCTC 3 cut(s) 102, 618, 1993
BsrDI GCAATG 4 cut(s) 388, 882, 1498, 2315
BsrFI RCCGGY 2 cut(s) 896, 1415
BsrGI TGTACA 1 cut(s) 1126
BsrI ACTGG 4 cut(s) 16, 172, 2202, 2385
BssAI RCCGGY 2 cut(s) 896, 1415
BssECI CCNNGG 9 cut(s) 543, 552, 666, 713, 800, 851, 1373, 1401, 1514
BssMI GATC 8 cut(s) 521, 671, 973, 1345, 1654, 1675, 2163, 2260
BssNAI GTATAC 1 cut(s) 1925
BssNI GRCGYC 2 cut(s) 450, 548
BssT1I CCWWGG 3 cut(s) 543, 666, 1514
Bst1107I GTATAC 1 cut(s) 1925
Bst2UI CCWGG 7 cut(s) 591, 1242, 1363, 1374, 1403, 1767, 2106
Bst4CI ACNGT 6 cut(s) 392, 530, 804, 1256, 1920, 2090
Bst6I CTCTTC 2 cut(s) 1491, 2298
BstACI GRCGYC 2 cut(s) 450, 548
BstAPI GCANNNNNTGC 1 cut(s) 2264
BstAUI TGTACA 1 cut(s) 1126
BstBI TTCGAA 1 cut(s) 1043
BstC8I GCNNGC 2 cut(s) 848, 2376
BstDEI CTNAG 4 cut(s) 1541, 1707, 2322, 2385
BstDSI CCRYGG 2 cut(s) 800, 1514
BstEII GGTNACC 1 cut(s) 386
BstENI CCTNNNNNAGG 1 cut(s) 910
BstF5I GGATG 6 cut(s) 787, 1114, 1512, 1775, 1951, 1985
BstFNI CGCG 3 cut(s) 597, 1902, 1904
BstH2I RGCGCY 1 cut(s) 551
BstHHI GCGC 4 cut(s) 358, 550, 1904, 2030
BstKTI GATC 8 cut(s) 524, 674, 976, 1348, 1657, 1678, 2166, 2263
BstMAI GTCTC 5 cut(s) 77, 298, 717, 940, 1231
BstMBI GATC 8 cut(s) 521, 671, 973, 1345, 1654, 1675, 2163, 2260
BstMWI GCNNNNNNNGC 9 cut(s) 547, 637, 1412, 1759, 1808, 2264, 2291, 2294, 2390
BstNI CCWGG 7 cut(s) 591, 1242, 1363, 1374, 1403, 1767, 2106
BstNSI RCATGY 2 cut(s) 1914, 2241
BstPI GGTNACC 1 cut(s) 386
BstSCI CCNGG 9 cut(s) 589, 850, 851, 1240, 1361, 1372, 1401, 1765, 2104
BstSFI CTRYAG 1 cut(s) 910
BstSLI GKGCMC 1 cut(s) 1841
BstUI CGCG 3 cut(s) 597, 1902, 1904
BstV1I GCAGC 6 cut(s) 352, 1072, 2047, 2254, 2272, 2281
BstV2I GAAGAC 3 cut(s) 264, 273, 1460
BstX2I RGATCY 4 cut(s) 521, 973, 1654, 2260
BstXI CCANNNNNNTGG 3 cut(s) 325, 383, 2435
BstYI RGATCY 4 cut(s) 521, 973, 1654, 2260
BstZ17I GTATAC 1 cut(s) 1925
BtgI CCRYGG 2 cut(s) 800, 1514
BtrI CACGTC 1 cut(s) 361
BtsCI GGATG 6 cut(s) 787, 1114, 1512, 1775, 1951, 1985
BtsI GCAGTG 1 cut(s) 351
BtsIMutI CAGTG 6 cut(s) 351, 535, 1781, 2209, 2270, 2378
BtuMI TCGCGA 1 cut(s) 597
Cac8I GCNNGC 2 cut(s) 848, 2376
CfoI GCGC 4 cut(s) 358, 550, 1904, 2030
Cfr10I RCCGGY 2 cut(s) 896, 1415
Cfr9I CCCGGG 1 cut(s) 851
CseI GACGC 1 cut(s) 458
Csp6I GTAC 2 cut(s) 1127, 1310
CviAII CATG 7 cut(s) 242, 878, 1226, 1429, 1515, 1911, 2238
CviQI GTAC 2 cut(s) 1127, 1310
DdeI CTNAG 4 cut(s) 1541, 1707, 2322, 2385
DinI GGCGCC 1 cut(s) 549
DpnI GATC 8 cut(s) 523, 673, 975, 1347, 1656, 1677, 2165, 2262
DpnII GATC 8 cut(s) 521, 671, 973, 1345, 1654, 1675, 2163, 2260
DrdI GACNNNNNNGTC 1 cut(s) 122
DseDI GACNNNNNNGTC 1 cut(s) 122
EaeI YGGCCR 1 cut(s) 1243
Eam1104I CTCTTC 2 cut(s) 1491, 2298
EarI CTCTTC 2 cut(s) 1491, 2298
EciI GGCGGA 1 cut(s) 325
Ecl136II GAGCTC 1 cut(s) 796
Eco130I CCWWGG 3 cut(s) 543, 666, 1514
Eco147I AGGCCT 1 cut(s) 1210
Eco24I GRGCYC 2 cut(s) 798, 1841
Eco31I GGTCTC 2 cut(s) 77, 1231
Eco47I GGWCC 5 cut(s) 39, 190, 286, 556, 2086
Eco53kI GAGCTC 1 cut(s) 796
Eco57I CTGAAG 4 cut(s) 681, 779, 978, 1545
Eco88I CYCGRG 2 cut(s) 551, 851
Eco91I GGTNACC 1 cut(s) 386
EcoICRI GAGCTC 1 cut(s) 796
EcoNI CCTNNNNNAGG 1 cut(s) 910
EcoO109I RGGNCCY 3 cut(s) 39, 1837, 1838
EcoO65I GGTNACC 1 cut(s) 386
EcoRII CCWGG 7 cut(s) 589, 1240, 1361, 1372, 1401, 1765, 2104
EcoT14I CCWWGG 3 cut(s) 543, 666, 1514
EcoT22I ATGCAT 1 cut(s) 2341
EcoT38I GRGCYC 2 cut(s) 798, 1841
EgeI GGCGCC 1 cut(s) 549
EheI GGCGCC 1 cut(s) 549
ErhI CCWWGG 3 cut(s) 543, 666, 1514
Esp3I CGTCTC 1 cut(s) 298
FaeI CATG 7 cut(s) 245, 881, 1229, 1432, 1518, 1914, 2241
FaqI GGGAC 1 cut(s) 25
FatI CATG 7 cut(s) 241, 877, 1225, 1428, 1514, 1910, 2237
FauI CCCGC 1 cut(s) 855
FblI GTMKAC 4 cut(s) 126, 437, 1367, 1924
Fnu4HI GCNGC 9 cut(s) 341, 779, 1061, 1994, 2036, 2102, 2268, 2286, 2295
FokI GGATG 6 cut(s) 774, 1121, 1519, 1782, 1958, 1992
FriOI GRGCYC 2 cut(s) 798, 1841
Fsp4HI GCNGC 9 cut(s) 341, 779, 1061, 1994, 2036, 2102, 2268, 2286, 2295
FspBI CTAG 3 cut(s) 203, 254, 1290
FspI TGCGCA 1 cut(s) 357
GlaI GCGC 4 cut(s) 357, 549, 1903, 2029
GluI GCNGC 9 cut(s) 341, 779, 1061, 1994, 2036, 2102, 2268, 2286, 2295
GsuI CTGGAG 2 cut(s) 101, 155
HaeII RGCGCY 1 cut(s) 551
HapII CCGG 4 cut(s) 791, 852, 897, 1416
HgaI GACGC 1 cut(s) 458
HhaI GCGC 4 cut(s) 358, 550, 1904, 2030
Hin1I GRCGYC 2 cut(s) 450, 548
Hin1II CATG 7 cut(s) 245, 881, 1229, 1432, 1518, 1914, 2241
Hin6I GCGC 4 cut(s) 356, 548, 1902, 2028
HinP1I GCGC 4 cut(s) 356, 548, 1902, 2028
HincII GTYRAC 3 cut(s) 127, 438, 1222
HindII GTYRAC 3 cut(s) 127, 438, 1222
HindIII AAGCTT 1 cut(s) 987
HinfI GANTC 7 cut(s) 206, 370, 832, 1112, 1145, 1300, 2360
HpaII CCGG 4 cut(s) 791, 852, 897, 1416
HphI GGTGA 6 cut(s) 398, 706, 757, 781, 1908, 2450
Hpy166II GTNNAC 7 cut(s) 127, 286, 438, 1222, 1368, 1925, 2120
Hpy188I TCNGA 9 cut(s) 49, 365, 409, 506, 812, 958, 1165, 1887, 2335
Hpy8I GTNNAC 7 cut(s) 127, 286, 438, 1222, 1368, 1925, 2120
Hpy99I CGWCG 6 cut(s) 29, 119, 128, 266, 452, 2043
HpyCH4III ACNGT 6 cut(s) 392, 530, 804, 1256, 1920, 2090
HpyCH4IV ACGT 1 cut(s) 360
HpyF10VI GCNNNNNNNGC 9 cut(s) 547, 637, 1412, 1759, 1808, 2264, 2291, 2294, 2390
HpyF3I CTNAG 4 cut(s) 1541, 1707, 2322, 2385
HpySE526I ACGT 1 cut(s) 360
Hsp92I GRCGYC 2 cut(s) 450, 548
Hsp92II CATG 7 cut(s) 245, 881, 1229, 1432, 1518, 1914, 2241
HspAI GCGC 4 cut(s) 356, 548, 1902, 2028
KasI GGCGCC 1 cut(s) 547
Kpn2I TCCGGA 1 cut(s) 790
Kzo9I GATC 8 cut(s) 521, 671, 973, 1345, 1654, 1675, 2163, 2260
LmnI GCTCC 8 cut(s) 107, 174, 754, 793, 801, 1196, 1814, 2255
Lsp1109I GCAGC 6 cut(s) 352, 1072, 2047, 2254, 2272, 2281
MaeI CTAG 3 cut(s) 203, 254, 1290
MaeII ACGT 1 cut(s) 360
MaeIII GTNAC 3 cut(s) 386, 1084, 2401
MalI GATC 8 cut(s) 523, 673, 975, 1347, 1656, 1677, 2165, 2262
MbiI CCGCTC 3 cut(s) 102, 618, 1993
MboI GATC 8 cut(s) 521, 671, 973, 1345, 1654, 1675, 2163, 2260
MfeI CAATTG 2 cut(s) 1008, 1035
MflI RGATCY 4 cut(s) 521, 973, 1654, 2260
MhlI GDGCHC 2 cut(s) 798, 1841
Mly113I GGCGCC 1 cut(s) 548
MlyI GAGTC 1 cut(s) 200
MmeI TCCRAC 5 cut(s) 72, 549, 717, 1173, 1843
Mph1103I ATGCAT 1 cut(s) 2341
MroI TCCGGA 1 cut(s) 790
MroXI GAANNNNTTC 2 cut(s) 648, 1581
MseI TTAA 7 cut(s) 1232, 1296, 1353, 1661, 1698, 1833, 1952
MslI CAYNNNNRTG 1 cut(s) 323
MspA1I CMGCKG 1 cut(s) 343
MspI CCGG 4 cut(s) 791, 852, 897, 1416
MspR9I CCNGG 9 cut(s) 591, 852, 853, 1242, 1363, 1374, 1403, 1767, 2106
MunI CAATTG 2 cut(s) 1008, 1035
Mva1269I GAATGC 2 cut(s) 900, 1493
MvaI CCWGG 7 cut(s) 591, 1242, 1363, 1374, 1403, 1767, 2106
MvnI CGCG 3 cut(s) 597, 1902, 1904
MwoI GCNNNNNNNGC 9 cut(s) 547, 637, 1412, 1759, 1808, 2264, 2291, 2294, 2390
NarI GGCGCC 1 cut(s) 548
NciI CCSGG 2 cut(s) 852, 853
NcoI CCATGG 1 cut(s) 1514
NdeII GATC 8 cut(s) 521, 671, 973, 1345, 1654, 1675, 2163, 2260
NlaIII CATG 7 cut(s) 245, 881, 1229, 1432, 1518, 1914, 2241
NlaIV GGNNCC 9 cut(s) 41, 474, 523, 549, 657, 711, 1839, 2062, 2394
NmeAIII GCCGAG 1 cut(s) 738
NmuCI GTSAC 2 cut(s) 386, 1084
NruI TCGCGA 1 cut(s) 597
NsbI TGCGCA 1 cut(s) 357
NsiI ATGCAT 1 cut(s) 2341
NspI RCATGY 2 cut(s) 1914, 2241
NspV TTCGAA 1 cut(s) 1043
PceI AGGCCT 1 cut(s) 1210
PciI ACATGT 1 cut(s) 2237
PcsI WCGNNNNNNNCGW 3 cut(s) 120, 123, 267
PctI GAATGC 2 cut(s) 900, 1493
PdmI GAANNNNTTC 2 cut(s) 648, 1581
PfeI GAWTC 6 cut(s) 370, 832, 1112, 1145, 1300, 2360
PflMI CCANNNNNTGG 1 cut(s) 827
PfoI TCCNGGA 1 cut(s) 1765
PkrI GCNGC 9 cut(s) 342, 780, 1062, 1995, 2037, 2103, 2269, 2287, 2296
PleI GAGTC 1 cut(s) 200
PluTI GGCGCC 1 cut(s) 551
PpsI GAGTC 1 cut(s) 200
PpuMI RGGWCCY 1 cut(s) 39
PscI ACATGT 1 cut(s) 2237
Psp124BI GAGCTC 1 cut(s) 798
Psp5II RGGWCCY 1 cut(s) 39
Psp6I CCWGG 7 cut(s) 589, 1240, 1361, 1372, 1401, 1765, 2104
PspEI GGTNACC 1 cut(s) 386
PspGI CCWGG 7 cut(s) 589, 1240, 1361, 1372, 1401, 1765, 2104
PspN4I GGNNCC 9 cut(s) 41, 474, 523, 549, 657, 711, 1839, 2062, 2394
PspOMI GGGCCC 1 cut(s) 1837
PspPPI RGGWCCY 1 cut(s) 39
PsuI RGATCY 4 cut(s) 521, 973, 1654, 2260
RruI TCGCGA 1 cut(s) 597
RsaI GTAC 2 cut(s) 1128, 1311
RsaNI GTAC 2 cut(s) 1127, 1310
RseI CAYNNNNRTG 1 cut(s) 323
SacI GAGCTC 1 cut(s) 798
SalI GTCGAC 2 cut(s) 125, 436
SaqAI TTAA 7 cut(s) 1232, 1296, 1353, 1661, 1698, 1833, 1952
SatI GCNGC 9 cut(s) 341, 779, 1061, 1994, 2036, 2102, 2268, 2286, 2295
Sau3AI GATC 8 cut(s) 521, 671, 973, 1345, 1654, 1675, 2163, 2260
SchI GAGTC 1 cut(s) 200
ScrFI CCNGG 9 cut(s) 591, 852, 853, 1242, 1363, 1374, 1403, 1767, 2106
SduI GDGCHC 2 cut(s) 798, 1841
SfcI CTRYAG 1 cut(s) 910
SfoI GGCGCC 1 cut(s) 549
SfuI TTCGAA 1 cut(s) 1043
SinI GGWCC 5 cut(s) 39, 190, 286, 556, 2086
SmaI CCCGGG 1 cut(s) 853
SmiMI CAYNNNNRTG 1 cut(s) 323
SseBI AGGCCT 1 cut(s) 1210
SsiI CCGC 9 cut(s) 100, 160, 310, 343, 618, 779, 848, 1993, 2101
SspDI GGCGCC 1 cut(s) 547
SspI AATATT 1 cut(s) 1423
SspMI CTAG 3 cut(s) 203, 254, 1290
SstI GAGCTC 1 cut(s) 798
StuI AGGCCT 1 cut(s) 1210
StyD4I CCNGG 9 cut(s) 589, 850, 851, 1240, 1361, 1372, 1401, 1765, 2104
StyI CCWWGG 3 cut(s) 543, 666, 1514
TaaI ACNGT 6 cut(s) 392, 530, 804, 1256, 1920, 2090
TaiI ACGT 1 cut(s) 363
TaqI TCGA 6 cut(s) 24, 114, 126, 437, 497, 1043
TatI WGTACW 2 cut(s) 1126, 1309
TauI GCSGC 3 cut(s) 781, 1996, 2104
TfiI GAWTC 6 cut(s) 370, 832, 1112, 1145, 1300, 2360
Tru1I TTAA 7 cut(s) 1232, 1296, 1353, 1661, 1698, 1833, 1952
Tru9I TTAA 7 cut(s) 1232, 1296, 1353, 1661, 1698, 1833, 1952
TscAI CASTG 6 cut(s) 358, 535, 1788, 2209, 2277, 2385
TseFI GTSAC 2 cut(s) 386, 1084
TseI GCWGC 6 cut(s) 340, 1060, 2035, 2267, 2285, 2294
Tsp45I GTSAC 2 cut(s) 386, 1084
TspGWI ACGGA 3 cut(s) 42, 59, 639
TspMI CCCGGG 1 cut(s) 851
TspRI CASTG 6 cut(s) 358, 535, 1788, 2209, 2277, 2385
Van91I CCANNNNNTGG 1 cut(s) 827
VpaK11BI GGWCC 5 cut(s) 39, 190, 286, 556, 2086
XagI CCTNNNNNAGG 1 cut(s) 910
XapI RAATTY 5 cut(s) 1158, 1670, 1721, 1819, 2245
XceI RCATGY 2 cut(s) 1914, 2241
XmaI CCCGGG 1 cut(s) 851
XmiI GTMKAC 4 cut(s) 126, 437, 1367, 1924
XmnI GAANNNNTTC 2 cut(s) 648, 1581
XspI CTAG 3 cut(s) 203, 254, 1290
Zsp2I ATGCAT 1 cut(s) 2341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.