Rh6DG505900

Cell division control protein 48 homolog C-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0007658
Physical Location & Seq
Reverse (-)
66025303 .. 66029925
4623 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG505900.1

Sequence Viewer

Length: 2466 bp
ATGAAGCCGGGAAAGAGGTCTGGCGGAGGAGGAGGGAGGTCGTCGTTTTCCGATAGAAGGCTGAACGAGTTTCGGACTCGGCTGGAGTCGTCCACCGAGTTAGACCACAGGTCCTCCGTGGACGAAATCGTTGACCATCTCCGCGGCGGTTACCCGGACTACGAGCGACTCAAGCGTCAGGTTTTCAGAAGGTTCGTCTCGCAAACCCTAGCCTCTCCCTCGTTCAAGCGCTCGAAGCCCCTACCGGTTATGAGCGGCTCATCGGACGAAGAAGAAGAAGAAGAAGAGGAGCTGGCCGGAAGTAAGAGGCGGAAGCGTGCTCGGAATGAGAGGGAAGAGAGACTGCAGCAGATAGAGGAAGCGCACGTTCGGAACATTAGGCAGAGCAATGGTAATGTGCCGTCTTCATCGTCGTCGTCATCGTCAGCTTCGGAGGACGAAGGAGATGAGGAGTCTACGTCGGAGGACGCGATATACGGCGAGGAATTGGAGCCGAAGTTTGATTTGATGAAATCGATGCTGCGGGAGGCGTATACGGATCCGAAAAGCGGCGGGAAATCCAAGGCGGCGGAGCAGCAGAAGGAGAAGAATGTGGAAATGGATATTCCAGGGCGGGAGAAGGTTAAATTAGTGGCCGGAAGTAGAGGGCCGAGGCCGGAGAGTGTGTCGAATAAGGCCGAGAGTGAGGCCAAGAGCTCTATTTCGAGAGGTGTTGAGGTGAAGAGGAATGAGGGGCCCAAGTTTAGTGACTTAGGTGGAATGCAGAAAGTGCTGGAGGAGCTGAACAAGGAGGTTATTAGGCCGCTTCGCCGGTCGTGGCTGCCGCAGTGGCTCGGAGTTAGGCCAATGTCTGGGATTTTGTTGTGTGGACCGCCGGGGTGTGGGAAGACTACTTTGGCTCATGCCATTGCCAATGAGACTGGCATTCCCTTCTATAAGATTTCGGCCACTGAAGTTGTCTCGGGTGTTTCAGGTGCATCTGAAGAAAACATACGAGATCTTTTTTCAAAAGCATATAGAACTGCCCCTTCAATTGTTTTTATTGATGAAATTGATGCAATTGCTTCGAAAAGAGAAAATATGCAAAGGGAAATGGAGAAGCGAATGGTTACACAACTGATGACTTGCATGGATCAATCTCATAGACCAGTACAGGCGGAAGATGCAAATTCTGACTCACAAAGTTCAGATCAGGCATCTGGCTATGTTCTTGTTATTGGAGCCACGAACAGGCCTGATGCTGTTGACCCTGCTTTAAGGAGGCCTGGGCGATTTGGTCGTGAGATTCTTTTGGGTGTTCCGGATGAAAGTTCAAGGCTTGAGATTCTGTCTGTGCTTACTCGCAAGCTAAAACTTGAAGGTTCTTTTGATCTTCTAAAGATTGCTAGGTCCACACCAGGGTATGTTGGAGCTGATTTGGCAGAGCTGGCTGACAGGGCAGGTAACATTGCCATGAACAGGATTTTTGATGAAATTGATTCAACCATTGAGGAAGGCAAGGAAGATTTCTGCCGGCAACCTGAAGAAATGGAAAAATATGCCATCAGTATGGCTGATTTTGAGGAAGCAGTTCAAGTCGTTCAACCTTCGTCAAAAAGAGAGGGATTCTCGGCAATTCCTAATGTGAAATGGGAAAATGTTGGTGGGCTAGATCTCTTGAGGAAGGAATTCGACCGTTACATAGTTAGGCGTATCAAACATCCTGAGAACTATGAGAAATTTGGAGTAAATTCAGAGACAGGTTTCTTGCTGTATGGGCCTCCCGGATGTGGAAAAACACTAATAGCAAAGGCTGTTGCTAATGAAGCAGGAGCCAATTTCATTTATATTAAGGGCCCTGAACTTCTGAATAAATATGTTGGAGAAAGTGAACTGGCAGTCCGGACATTATTTACTCGTGCAAGGACATGCTCACCATGCATACTTTTCTTTGATGAGGTGGATGCTTTGACAACAAGGCGGGGAAAAGAAGGGGGGTGGGTTGTTGAGCGGTTATTGAACCAGTTACTTATAGAGTTAGATGGTGCAGACCAGCGGCGGGGTGTATTTGTTGTTGGTGCCACTAATAGACCTGATGTAATGGACCGTGCCTTTTTACGGCCGGGTAGGTTTGGTAAACTAATTTATGTCGCCCCGCCCAACACAGATGAGCGTGGTTTGATCTTGAAAGCTATAGGAAGGAAGTATCCTGTTGATGCGAGTGTAGATCTGGGTGAGATTGGAAAATGGAAGGCTTGTGAAAATTTTAGCGGAGCTGATCTTGCTGCACTGATGGATGAAGCTGCTATGGCTGCTCTTGAAGAGAAAGAGACATCAGCCGAGAGTTCAGATGCATCTTCGTGGACAATTAAAGAAACTCACTTTCAACAAGCACTGGCAAAAATCATACCATCTCTAACAGAAAGGCAACTTCTATACTATGAGAGATTTGGAGAGAGCCTCAAGGCTCCAAGAAATGAAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
AAA Nucleolin_bd

Protein Analysis

821

Amino Acids

91.31

Weight (kDa)

5.6

Isoelectric Point (pI)

54.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RuvB_N PF05496 283 - 368 4.5e-07 Holliday junction DNA helicase RuvB P-loop domain
AAA PF00004 286 - 432 7.2e-41 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 456 - 494 2.1e-09 AAA+ lid domain
AAA PF00004 583 - 710 1.1e-41 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 734 - 777 3.1e-09 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 174
Acc36I ACCTGC 1 cut(s) 1430
AccB1I GGYRCC 1 cut(s) 2057
AccB7I CCANNNNNTGG 1 cut(s) 851
AccBSI CCGCTC 2 cut(s) 255, 1990
AccI GTMKAC 2 cut(s) 455, 533
AccII CGCG 2 cut(s) 144, 470
AccIII TCCGGA 2 cut(s) 1300, 1881
AclWI GGATC 3 cut(s) 533, 546, 1140
AcoI YGGCCR 4 cut(s) 294, 633, 945, 2099
AcsI RAATTY 5 cut(s) 1168, 1667, 1718, 1729, 2242
AcuI CTGAAG 3 cut(s) 972, 1002, 1542
AfaI GTAC 1 cut(s) 1152
AfeI AGCGCT 1 cut(s) 230
AgeI ACCGGT 1 cut(s) 244
AhdI GACNNNNNGTC 1 cut(s) 109
AjnI CCWGG 3 cut(s) 607, 1264, 1396
AjuI GAANNNNNNNTTGG 2 cut(s) 878, 910
AloI GAACNNNNNNTCC 2 cut(s) 1863, 1895
Alw21I GWGCWC 2 cut(s) 322, 698
Alw26I GTCTC 6 cut(s) 202, 334, 911, 964, 1730, 2303
AlwI GGATC 3 cut(s) 533, 546, 1140
Ama87I CYCGRG 1 cut(s) 961
Aor13HI TCCGGA 2 cut(s) 1300, 1881
Aor51HI AGCGCT 1 cut(s) 230
ApaI GGGCCC 2 cut(s) 738, 1838
ApeKI GCWGC 7 cut(s) 346, 520, 574, 820, 2264, 2282, 2291
ApoI RAATTY 5 cut(s) 1168, 1667, 1718, 1729, 2242
AsiGI ACCGGT 1 cut(s) 244
Asp700I GAANNNNTTC 2 cut(s) 1569, 1667
AspLEI GCGC 2 cut(s) 231, 364
AsuC2I CCSGG 5 cut(s) 9, 155, 876, 1764, 2103
AsuHPI GGTGA 3 cut(s) 730, 1905, 2225
AsuII TTCGAA 1 cut(s) 1067
AvaI CYCGRG 1 cut(s) 961
AvaII GGWCC 4 cut(s) 111, 869, 1389, 2083
BaeGI GKGCMC 2 cut(s) 738, 1838
BamHI GGATCC 1 cut(s) 538
BanI GGYRCC 1 cut(s) 2057
BanII GRGCYC 3 cut(s) 698, 738, 1838
BarI GAAGNNNNNNTAC 2 cut(s) 975, 1007
BauI CACGAG 1 cut(s) 1896
BbsI GAAGAC 2 cut(s) 396, 893
Bbv12I GWGCWC 2 cut(s) 322, 698
BbvI GCAGC 7 cut(s) 358, 507, 586, 807, 2251, 2269, 2278
BccI CCATC 5 cut(s) 144, 1550, 2015, 2266, 2398
BceAI ACGGC 3 cut(s) 385, 493, 2114
BcgI CGANNNNNNTGC 2 cut(s) 1047, 1081
BciT130I CCWGG 3 cut(s) 609, 1266, 1398
BciVI GTATCC 1 cut(s) 2196
BcnI CCSGG 5 cut(s) 9, 155, 876, 1764, 2103
BcoDI GTCTC 6 cut(s) 202, 334, 911, 964, 1730, 2303
BfaI CTAG 3 cut(s) 209, 1386, 1649
BfmI CTRYAG 2 cut(s) 344, 2172
BfoI RGCGCY 1 cut(s) 232
BfuAI ACCTGC 1 cut(s) 1430
BfuI GTATCC 1 cut(s) 2196
BglI GCCNNNNNGGC 1 cut(s) 829
BglII AGATCT 3 cut(s) 997, 1651, 2206
Bme1390I CCNGG 8 cut(s) 9, 155, 609, 876, 1266, 1398, 1764, 2103
Bme18I GGWCC 4 cut(s) 111, 869, 1389, 2083
BmeRI GACNNNNNGTC 1 cut(s) 109
BmeT110I CYCGRG 1 cut(s) 961
BmiI GGNNCC 9 cut(s) 492, 540, 735, 736, 1222, 1813, 1836, 2059, 2448
BmrFI CCNGG 8 cut(s) 9, 155, 609, 876, 1266, 1398, 1764, 2103
BpiI GAAGAC 2 cut(s) 396, 893
BplI GAGNNNNNCTC 4 cut(s) 1592, 1624, 2424, 2456
BpmI CTGGAG 2 cut(s) 104, 794
Bpu14I TTCGAA 1 cut(s) 1067
BpuEI CTTGAG 4 cut(s) 155, 1340, 1678, 2426
BpuMI CCSGG 5 cut(s) 9, 155, 876, 1764, 2103
Bsa29I ATCGAT 1 cut(s) 515
BsaJI CCNNGG 8 cut(s) 117, 142, 561, 608, 650, 875, 1265, 1397
BsaWI WCCGGW 3 cut(s) 244, 1300, 1881
BsaXI ACNNNNNCTCC 8 cut(s) 98, 128, 443, 473, 482, 512, 650, 680
Bse118I RCCGGY 3 cut(s) 244, 810, 1512
Bse1I ACTGG 5 cut(s) 925, 1148, 1878, 2002, 2379
Bse3DI GCAATG 3 cut(s) 394, 906, 1446
BseAI TCCGGA 2 cut(s) 1300, 1881
BseBI CCWGG 3 cut(s) 609, 1266, 1398
BseCI ATCGAT 1 cut(s) 515
BseDI CCNNGG 8 cut(s) 117, 142, 561, 608, 650, 875, 1265, 1397
BseGI GGATG 5 cut(s) 1309, 1699, 1772, 1948, 2281
BseMI GCAATG 3 cut(s) 394, 906, 1446
BseMII CTCAG 1 cut(s) 1695
BseNI ACTGG 5 cut(s) 925, 1148, 1878, 2002, 2379
BseRI GAGGAG 5 cut(s) 42, 45, 302, 464, 791
BseSI GKGCMC 2 cut(s) 738, 1838
BseX3I CGGCCG 1 cut(s) 2099
BseXI GCAGC 7 cut(s) 358, 507, 586, 807, 2251, 2269, 2278
BsgI GTGCAG 2 cut(s) 2046, 2250
Bsh1236I CGCG 2 cut(s) 144, 470
Bsh1285I CGRYCG 3 cut(s) 815, 1675, 2102
BshNI GGYRCC 1 cut(s) 2057
BshTI ACCGGT 1 cut(s) 244
BshVI ATCGAT 1 cut(s) 515
BsiEI CGRYCG 3 cut(s) 815, 1675, 2102
BsiHKAI GWGCWC 2 cut(s) 322, 698
BsiHKCI CYCGRG 1 cut(s) 961
BsmAI GTCTC 6 cut(s) 202, 334, 911, 964, 1730, 2303
BsmBI CGTCTC 1 cut(s) 202
BsmI GAATGC 2 cut(s) 765, 924
BsoBI CYCGRG 1 cut(s) 961
Bsp119I TTCGAA 1 cut(s) 1067
Bsp120I GGGCCC 2 cut(s) 734, 1834
Bsp1286I GDGCHC 4 cut(s) 322, 698, 738, 1838
Bsp13I TCCGGA 2 cut(s) 1300, 1881
Bsp143I GATC 9 cut(s) 538, 997, 1132, 1189, 1369, 1651, 2160, 2206, 2257
BspCNI CTCAG 1 cut(s) 1696
BspDI ATCGAT 1 cut(s) 515
BspEI TCCGGA 2 cut(s) 1300, 1881
BspFNI CGCG 2 cut(s) 144, 470
BspLI GGNNCC 9 cut(s) 492, 540, 735, 736, 1222, 1813, 1836, 2059, 2448
BspMAI CTGCAG 1 cut(s) 348
BspMI ACCTGC 1 cut(s) 1430
BspPI GGATC 3 cut(s) 533, 546, 1140
BspT104I TTCGAA 1 cut(s) 1067
BspT107I GGYRCC 1 cut(s) 2057
BsrBI CCGCTC 2 cut(s) 255, 1990
BsrDI GCAATG 3 cut(s) 394, 906, 1446
BsrFI RCCGGY 3 cut(s) 244, 810, 1512
BsrI ACTGG 5 cut(s) 925, 1148, 1878, 2002, 2379
BssAI RCCGGY 3 cut(s) 244, 810, 1512
BssECI CCNNGG 8 cut(s) 117, 142, 561, 608, 650, 875, 1265, 1397
BssMI GATC 9 cut(s) 538, 997, 1132, 1189, 1369, 1651, 2160, 2206, 2257
BssNAI GTATAC 1 cut(s) 534
BssSI CACGAG 1 cut(s) 1896
BssT1I CCWWGG 1 cut(s) 561
Bst1107I GTATAC 1 cut(s) 534
Bst2BI CACGAG 1 cut(s) 1896
Bst2UI CCWGG 3 cut(s) 609, 1266, 1398
Bst4CI ACNGT 2 cut(s) 1676, 2087
Bst6I CTCTTC 4 cut(s) 279, 330, 716, 2295
BstAPI GCANNNNNTGC 1 cut(s) 769
BstBI TTCGAA 1 cut(s) 1067
BstC8I GCNNGC 5 cut(s) 294, 318, 1346, 1428, 1514
BstDEI CTNAG 2 cut(s) 751, 1704
BstDSI CCRYGG 2 cut(s) 117, 142
BstEII GGTNACC 1 cut(s) 149
BstF5I GGATG 5 cut(s) 1309, 1699, 1772, 1948, 2281
BstFNI CGCG 2 cut(s) 144, 470
BstH2I RGCGCY 1 cut(s) 232
BstHHI GCGC 2 cut(s) 231, 364
BstKTI GATC 9 cut(s) 541, 1000, 1135, 1192, 1372, 1654, 2163, 2209, 2260
BstMAI GTCTC 6 cut(s) 202, 334, 911, 964, 1730, 2303
BstMBI GATC 9 cut(s) 538, 997, 1132, 1189, 1369, 1651, 2160, 2206, 2257
BstMCI CGRYCG 3 cut(s) 815, 1675, 2102
BstNI CCWGG 3 cut(s) 609, 1266, 1398
BstNSI RCATGY 1 cut(s) 1911
BstPI GGTNACC 1 cut(s) 149
BstSCI CCNGG 8 cut(s) 7, 153, 607, 874, 1264, 1396, 1762, 2101
BstSFI CTRYAG 2 cut(s) 344, 2172
BstSLI GKGCMC 2 cut(s) 738, 1838
BstUI CGCG 2 cut(s) 144, 470
BstV1I GCAGC 7 cut(s) 358, 507, 586, 807, 2251, 2269, 2278
BstV2I GAAGAC 2 cut(s) 396, 893
BstX2I RGATCY 4 cut(s) 538, 997, 1651, 2206
BstXI CCANNNNNNTGG 1 cut(s) 1549
BstYI RGATCY 4 cut(s) 538, 997, 1651, 2206
BstZ17I GTATAC 1 cut(s) 534
BstZI CGGCCG 1 cut(s) 2099
Bsu15I ATCGAT 1 cut(s) 515
BsuI GTATCC 1 cut(s) 2196
BsuTUI ATCGAT 1 cut(s) 515
BtgI CCRYGG 2 cut(s) 117, 142
BtsCI GGATG 5 cut(s) 1309, 1699, 1772, 1948, 2281
BtsI GCAGTG 1 cut(s) 833
BtsIMutI CAGTG 4 cut(s) 833, 948, 2267, 2372
BveI ACCTGC 1 cut(s) 1430
Cac8I GCNNGC 5 cut(s) 294, 318, 1346, 1428, 1514
CfoI GCGC 2 cut(s) 231, 364
Cfr10I RCCGGY 3 cut(s) 244, 810, 1512
Cfr42I CCGCGG 1 cut(s) 145
ClaI ATCGAT 1 cut(s) 515
CseI GACGC 2 cut(s) 164, 476
Csp6I GTAC 1 cut(s) 1151
CspAI ACCGGT 1 cut(s) 244
CspCI CAANNNNNGTGG 2 cut(s) 937, 972
CviAII CATG 6 cut(s) 902, 1129, 1453, 1908, 1917, 2463
CviQI GTAC 1 cut(s) 1151
DdeI CTNAG 2 cut(s) 751, 1704
DpnI GATC 9 cut(s) 540, 999, 1134, 1191, 1371, 1653, 2162, 2208, 2259
DpnII GATC 9 cut(s) 538, 997, 1132, 1189, 1369, 1651, 2160, 2206, 2257
DrdI GACNNNNNNGTC 1 cut(s) 174
DriI GACNNNNNGTC 1 cut(s) 109
DseDI GACNNNNNNGTC 1 cut(s) 174
EaeI YGGCCR 4 cut(s) 294, 633, 945, 2099
EagI CGGCCG 1 cut(s) 2099
Eam1104I CTCTTC 4 cut(s) 279, 330, 716, 2295
Eam1105I GACNNNNNGTC 1 cut(s) 109
EarI CTCTTC 4 cut(s) 279, 330, 716, 2295
EciI GGCGGA 4 cut(s) 39, 325, 584, 1172
Ecl136II GAGCTC 1 cut(s) 696
EclXI CGGCCG 1 cut(s) 2099
Eco130I CCWWGG 1 cut(s) 561
Eco147I AGGCCT 2 cut(s) 1234, 1264
Eco24I GRGCYC 3 cut(s) 698, 738, 1838
Eco47I GGWCC 4 cut(s) 111, 869, 1389, 2083
Eco47III AGCGCT 1 cut(s) 230
Eco52I CGGCCG 1 cut(s) 2099
Eco53kI GAGCTC 1 cut(s) 696
Eco57I CTGAAG 3 cut(s) 972, 1002, 1542
Eco88I CYCGRG 1 cut(s) 961
Eco91I GGTNACC 1 cut(s) 149
EcoICRI GAGCTC 1 cut(s) 696
EcoO109I RGGNCCY 4 cut(s) 111, 734, 1834, 1835
EcoO65I GGTNACC 1 cut(s) 149
EcoRI GAATTC 1 cut(s) 1667
EcoRII CCWGG 3 cut(s) 607, 1264, 1396
EcoT14I CCWWGG 1 cut(s) 561
EcoT22I ATGCAT 2 cut(s) 1922, 2335
EcoT38I GRGCYC 3 cut(s) 698, 738, 1838
ErhI CCWWGG 1 cut(s) 561
Esp3I CGTCTC 1 cut(s) 202
FaeI CATG 6 cut(s) 905, 1132, 1456, 1911, 1920, 2466
FatI CATG 6 cut(s) 901, 1128, 1452, 1907, 1916, 2462
FauI CCCGC 6 cut(s) 516, 545, 606, 1953, 2031, 2142
FblI GTMKAC 2 cut(s) 455, 533
FokI GGATG 5 cut(s) 1316, 1686, 1779, 1955, 2288
FriOI GRGCYC 3 cut(s) 698, 738, 1838
FspBI CTAG 3 cut(s) 209, 1386, 1649
GlaI GCGC 2 cut(s) 230, 363
GsuI CTGGAG 2 cut(s) 104, 794
HaeII RGCGCY 1 cut(s) 232
HgaI GACGC 2 cut(s) 164, 476
HhaI GCGC 2 cut(s) 231, 364
Hin1II CATG 6 cut(s) 905, 1132, 1456, 1911, 1920, 2466
Hin6I GCGC 2 cut(s) 229, 362
HinP1I GCGC 2 cut(s) 229, 362
HincII GTYRAC 2 cut(s) 133, 1246
HindII GTYRAC 2 cut(s) 133, 1246
HinfI GANTC 9 cut(s) 76, 86, 168, 452, 1175, 1285, 1324, 1478, 1605
HphI GGTGA 3 cut(s) 730, 1905, 2225
Hpy188III TCNNGA 8 cut(s) 705, 1280, 1301, 1657, 1703, 1882, 2164, 2297
Hpy99I CGWCG 4 cut(s) 46, 415, 418, 463
HpyCH4III ACNGT 2 cut(s) 1676, 2087
HpyCH4IV ACGT 2 cut(s) 366, 458
HpyF3I CTNAG 2 cut(s) 751, 1704
HpySE526I ACGT 2 cut(s) 366, 458
Hsp92II CATG 6 cut(s) 905, 1132, 1456, 1911, 1920, 2466
HspAI GCGC 2 cut(s) 229, 362
Kpn2I TCCGGA 2 cut(s) 1300, 1881
KroI GCCGGC 1 cut(s) 1512
KroNI GCCGGC 1 cut(s) 1514
KspI CCGCGG 1 cut(s) 145
Kzo9I GATC 9 cut(s) 538, 997, 1132, 1189, 1369, 1651, 2160, 2206, 2257
LmnI GCTCC 9 cut(s) 289, 490, 571, 778, 1220, 1409, 1811, 2252, 2452
Lsp1109I GCAGC 7 cut(s) 358, 507, 586, 807, 2251, 2269, 2278
MaeI CTAG 3 cut(s) 209, 1386, 1649
MaeII ACGT 2 cut(s) 366, 458
MaeIII GTNAC 6 cut(s) 149, 746, 1108, 1442, 1676, 2004
MalI GATC 9 cut(s) 540, 999, 1134, 1191, 1371, 1653, 2162, 2208, 2259
MbiI CCGCTC 2 cut(s) 255, 1990
MboI GATC 9 cut(s) 538, 997, 1132, 1189, 1369, 1651, 2160, 2206, 2257
MfeI CAATTG 2 cut(s) 1032, 1059
MflI RGATCY 4 cut(s) 538, 997, 1651, 2206
MhlI GDGCHC 4 cut(s) 322, 698, 738, 1838
MlyI GAGTC 5 cut(s) 70, 95, 162, 461, 1169
MmeI TCCRAC 3 cut(s) 441, 1387, 1840
Mph1103I ATGCAT 2 cut(s) 1922, 2335
MroI TCCGGA 2 cut(s) 1300, 1881
MroNI GCCGGC 1 cut(s) 1512
MroXI GAANNNNTTC 2 cut(s) 1569, 1667
MseI TTAA 4 cut(s) 624, 1256, 1830, 2349
MslI CAYNNNNRTG 3 cut(s) 1451, 1547, 2338
MspA1I CMGCKG 2 cut(s) 144, 2035
MspR9I CCNGG 8 cut(s) 9, 155, 609, 876, 1266, 1398, 1764, 2103
MunI CAATTG 2 cut(s) 1032, 1059
Mva1269I GAATGC 2 cut(s) 765, 924
MvaI CCWGG 3 cut(s) 609, 1266, 1398
MvnI CGCG 2 cut(s) 144, 470
NaeI GCCGGC 1 cut(s) 1514
NciI CCSGG 5 cut(s) 9, 155, 876, 1764, 2103
NdeII GATC 9 cut(s) 538, 997, 1132, 1189, 1369, 1651, 2160, 2206, 2257
NgoMIV GCCGGC 1 cut(s) 1512
NlaIII CATG 6 cut(s) 905, 1132, 1456, 1911, 1920, 2466
NlaIV GGNNCC 9 cut(s) 492, 540, 735, 736, 1222, 1813, 1836, 2059, 2448
NmeAIII GCCGAG 5 cut(s) 58, 675, 703, 1589, 2344
NmuCI GTSAC 1 cut(s) 746
NsiI ATGCAT 2 cut(s) 1922, 2335
NspI RCATGY 1 cut(s) 1911
NspV TTCGAA 1 cut(s) 1067
PceI AGGCCT 2 cut(s) 1234, 1264
PcsI WCGNNNNNNNCGW 2 cut(s) 419, 467
PctI GAATGC 2 cut(s) 765, 924
PdiI GCCGGC 1 cut(s) 1514
PdmI GAANNNNTTC 2 cut(s) 1569, 1667
PfeI GAWTC 4 cut(s) 1285, 1324, 1478, 1605
PflMI CCANNNNNTGG 1 cut(s) 851
PfoI TCCNGGA 1 cut(s) 1762
PinAI ACCGGT 1 cut(s) 244
PleI GAGTC 5 cut(s) 70, 94, 162, 460, 1169
PpsI GAGTC 5 cut(s) 70, 94, 162, 460, 1169
PpuMI RGGWCCY 1 cut(s) 111
Psp124BI GAGCTC 1 cut(s) 698
Psp5II RGGWCCY 1 cut(s) 111
Psp6I CCWGG 3 cut(s) 607, 1264, 1396
PspEI GGTNACC 1 cut(s) 149
PspGI CCWGG 3 cut(s) 607, 1264, 1396
PspN4I GGNNCC 9 cut(s) 492, 540, 735, 736, 1222, 1813, 1836, 2059, 2448
PspOMI GGGCCC 2 cut(s) 734, 1834
PspPPI RGGWCCY 1 cut(s) 111
PstI CTGCAG 1 cut(s) 348
PsuI RGATCY 4 cut(s) 538, 997, 1651, 2206
RsaI GTAC 1 cut(s) 1152
RsaNI GTAC 1 cut(s) 1151
RseI CAYNNNNRTG 3 cut(s) 1451, 1547, 2338
SacI GAGCTC 1 cut(s) 698
SacII CCGCGG 1 cut(s) 145
SaqAI TTAA 4 cut(s) 624, 1256, 1830, 2349
Sau3AI GATC 9 cut(s) 538, 997, 1132, 1189, 1369, 1651, 2160, 2206, 2257
SchI GAGTC 5 cut(s) 70, 95, 162, 461, 1169
ScrFI CCNGG 8 cut(s) 9, 155, 609, 876, 1266, 1398, 1764, 2103
SduI GDGCHC 4 cut(s) 322, 698, 738, 1838
SfcI CTRYAG 2 cut(s) 344, 2172
Sfr303I CCGCGG 1 cut(s) 145
SfuI TTCGAA 1 cut(s) 1067
SgrBI CCGCGG 1 cut(s) 145
SinI GGWCC 4 cut(s) 111, 869, 1389, 2083
SmiMI CAYNNNNRTG 3 cut(s) 1451, 1547, 2338
SmlI CTYRAG 4 cut(s) 170, 1319, 1657, 2441
SmoI CTYRAG 4 cut(s) 170, 1319, 1657, 2441
SseBI AGGCCT 2 cut(s) 1234, 1264
SspMI CTAG 3 cut(s) 209, 1386, 1649
SstI GAGCTC 1 cut(s) 698
StuI AGGCCT 2 cut(s) 1234, 1264
StyD4I CCNGG 8 cut(s) 7, 153, 607, 874, 1264, 1396, 1762, 2101
StyI CCWWGG 1 cut(s) 561
TaaI ACNGT 2 cut(s) 1676, 2087
TaiI ACGT 2 cut(s) 369, 461
TaqI TCGA 6 cut(s) 233, 515, 668, 704, 1067, 1671
TatI WGTACW 1 cut(s) 1150
TauI GCSGC 7 cut(s) 147, 258, 552, 569, 805, 826, 2038
TfiI GAWTC 4 cut(s) 1285, 1324, 1478, 1605
Tru1I TTAA 4 cut(s) 624, 1256, 1830, 2349
Tru9I TTAA 4 cut(s) 624, 1256, 1830, 2349
TscAI CASTG 4 cut(s) 833, 955, 2274, 2379
TseFI GTSAC 1 cut(s) 746
TseI GCWGC 7 cut(s) 346, 520, 574, 820, 2264, 2282, 2291
Tsp45I GTSAC 1 cut(s) 746
TspGWI ACGGA 2 cut(s) 106, 551
TspRI CASTG 4 cut(s) 833, 955, 2274, 2379
Van91I CCANNNNNTGG 1 cut(s) 851
VpaK11BI GGWCC 4 cut(s) 111, 869, 1389, 2083
XapI RAATTY 5 cut(s) 1168, 1667, 1718, 1729, 2242
XceI RCATGY 1 cut(s) 1911
XmiI GTMKAC 2 cut(s) 455, 533
XmnI GAANNNNTTC 2 cut(s) 1569, 1667
XspI CTAG 3 cut(s) 209, 1386, 1649
Zsp2I ATGCAT 2 cut(s) 1922, 2335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.