MD17G1241700.v1.1

Cell division control protein 48 homolog C-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0007658
Physical Location & Seq
Reverse (-)
29080154 .. 29094993
14840 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1241700.v1.1.491

Sequence Viewer

Length: 2487 bp
ATGAAGAAGACGGGAAGAAGGTTCGATGGAGGCGGGAGGTCCCTCTCCGAACAAAAGCAGAAGGTTCTCCGTTGTCGTCTGGAGACCTTCAAGCACCTCCGCTCCTCCTCTCTCGACGAAATCGTCTACCAACTTCGCACTAATTACAAAGACTACCACCGCATCAAGCTCCAGTCTTTCACCAAGTTCGTCCAGCAAACCCTAGACTCCCCTTCCTTCAAGCTATCCAAAACCCTAATCCATGTCAGCGACCTAGAAGACGACGAAGAAGATGAAGAAGTCGACCATAGCAATTCCAAGAGGAGGCGGAAGGCCAATAAGATGGAGGAGAGATTGCAGAGAATGGAGACGGCGCACGTCAGAAGGATTCGCCAGAGCAATGGTGATCGTCCATCTTCAGATGATGATGATGAGGAAGAAGAGGAGGATGAGGATGGGGCGGTGTCGACATCGGACTCGGACGACGCCATATACAGCGAGAAAGTGGAGCCGGAGTTTGATGTGATGAAATCGAGCCTCCGGGCATCTTATATGGGATCCAGCAGCGCCTTGAAGCCCAAGGCGGCCGAGGAGAAGAAGGAGAAGAATGTAGAAATTGAGCTTCCTGGTCGCGAGAAGGTTGGGCTAATGAGCGAAAATGGAGGGCGAGGGGGGCAAGAGACATTCCGAGAAGCTGAAGCCAAGGGATCGGTTTCCAGAGAGGTTGAGGTGAAGGGGAGTGAGGGGCCGAGGTTTAGAGACTTAGGTGGGATGGAGAAGGTGATTGAGGAGCTGAAGATGGAGGTGATTGTGCCGCTTCGCCATCCAGAGCTCCCGCTGTGGCTCGGAGTTAGGCCAATGTCTGGGATTCTGTTGTATGGCCCCCCCGGCTGTGGCAAGACCAAATTGGCTCATGCCATTGCCAATGAAACCGGCATTCCCTTTTATAAGATTTCTGCCACCGAAGTCGTCTCTGGTGTCTCAGGTGCATCCGAAGAAAATATACGAGAGCTTTTTTCTAAAGCTTACAGAACTGCCCCTTCAATTGTATTTATTGATGAAATTGATGCAATTGCTTCGAAAAGAGAAAGTTTGCAGCGTGAGATGGAGAGGCGAATTGTCACACAACTAATGACTTGCATGGATGAATCTCATAGGCTTGTGCAATCAGCTGATGCAGATTCTAACTCACAAAGTTCAGATAACAAGTCTGGCTATGTTCTTGTAATTGGAGCGACCAATAGGCCTGATGCTGTTGACGGTGCTCTAAGGAGGCCTGGTCGATTTGACCGTGAGATTGTTTTAGGCGTTCCAGATGAAAATGCTAGGGTTAAGATTCTTTCTGTGCTTACACGCAACCTAAAACTTGAAGGTTCTTTTGATCTTCTTAAAATAGCCAGGTCGACACCAGGGTTTGTTGGGGCCGATTTGAAAGCCTTGGCTGACAGAGCTGGTAACATTGCCATGAAAAGGATTATACACAAGAGGAAGACTGATATGTCGGTAGATACCATGGATGAGGAAGGCAATGAAGAGTGGTGGATGCAACCATGGTTGCCTGAAGAAATGGAAAAGCTCACAATCACTATGGCTGATTTTGAGGAAGCAGTTGAAGTGGTTCAGCCGTCGTCAAAAAGAGAAGGATTCTCTGCAATTCCAAATGTAAAATGGGAAGATGTTGGTGGATTAGATCTTTTAAGGAAGGAGTTTGATCGCTATATTGTTAGACGTGTTAAATATCCTGAGAACTATGAGGAATTTGGAGTAGATTTAGAGACAGGATTTTTGCTCTATGGGCCTCCTGGATGTGGTAAAACACTGATAGCAAAGGCTGTCGCTAATGAAGCAGGAGCAAATTTCATTCACATTAAGGGGCCCGAACTTTTGAATAAATATGTTGGAGAAAGTGAGTTGGCAGTTCGGACATTGTTTAGTCGGGCAAGGACATGCTCACCATGTATACTTTTCTTTGATGAGGTTGATGCATTAACAACAAAGCGGGGGAAAGAAGGCGGATGGGTTATTGAGCGGCTGCTGAATCAGCTACTTATAGAGTTAGATGGCGCAGAGCAGCGACGAGGTGTATTTGTTATTGGTGCCACTAATAGACCCGATGTAATGGACCGTGCTGTTCTGCGGCCCGGTAGGTTCGGTAAACTTATTTATGTCGCCCCACCCACAAAAGATGAGCGTGGTTTGATCTTAAAAGCACTTGCGAGGAAGAAGCCTATTGATGCTAGTGTAGATCTGAGTGAGATTGGACAAAGGGAATTGTGTGAAAATTTCAGTGGAGCTGATCTTGCTGCACTGATGAATGAGGCTGCTATGGCTGCTCTTGAAGAGAAATTGACATTACCTGAGAGGATTTCAGATGCATCTACATGGACGATAAAAGAATCTCACTTTGAGAAAGCACTGGCTAAGATCGCAGCATCTGTAACTGACCAGCAAATGCAATACTATAAGAGATTTGGTGAGAGCCTCAAAGCACCAAGAAACAAAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
AAA Nucleolin_bd

Protein Analysis

829

Amino Acids

92.94

Weight (kDa)

5.65

Isoelectric Point (pI)

50.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RuvB_N PF05496 280 - 363 1.9e-06 Holliday junction DNA helicase RuvB P-loop domain
AAA PF00004 283 - 429 1.3e-40 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 453 - 488 7e-10 AAA+ lid domain
AAA PF00004 589 - 716 2.8e-42 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 740 - 777 1e-09 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 927
AasI GACNNNNNNGTC 2 cut(s) 122, 1477
AccB1I GGYRCC 1 cut(s) 2075
AccB7I CCANNNNNTGG 1 cut(s) 842
AccBSI CCGCTC 2 cut(s) 102, 2008
AccI GTMKAC 5 cut(s) 126, 282, 446, 1382, 1939
AccII CGCG 1 cut(s) 612
AclWI GGATC 3 cut(s) 531, 544, 694
AcoI YGGCCR 1 cut(s) 564
AcsI RAATTY 3 cut(s) 1736, 1834, 2260
AcuI CTGAAG 4 cut(s) 381, 696, 794, 1560
AcyI GRCGYC 1 cut(s) 465
AfiI CCNNNNNNNGG 5 cut(s) 303, 842, 872, 1449, 1787
AflIII ACRYGT 1 cut(s) 1708
AgsI TTSAA 9 cut(s) 91, 220, 553, 1023, 1349, 1411, 1592, 1867, 2318
AjiI CACGTC 2 cut(s) 358, 1709
AjnI CCWGG 5 cut(s) 604, 1255, 1376, 1387, 1780
Alw21I GWGCWC 2 cut(s) 813, 1246
Alw26I GTCTC 7 cut(s) 77, 341, 653, 732, 955, 964, 1748
AlwI GGATC 3 cut(s) 531, 544, 694
AlwNI CAGNNNCTG 1 cut(s) 2414
ApaI GGGCCC 1 cut(s) 1857
ApeKI GCWGC 8 cut(s) 543, 1075, 2011, 2050, 2282, 2300, 2309, 2408
ApoI RAATTY 3 cut(s) 1736, 1834, 2260
ArsI GACNNNNNNTTYG 2 cut(s) 1747, 1779
Asp700I GAANNNNTTC 1 cut(s) 1596
AspLEI GCGC 3 cut(s) 355, 548, 2045
AspS9I GGNCC 9 cut(s) 39, 725, 860, 1401, 1775, 1853, 1854, 2101, 2118
AsuC2I CCSGG 3 cut(s) 521, 867, 2121
AsuHPI GGTGA 7 cut(s) 172, 395, 721, 772, 796, 1923, 2465
AsuII TTCGAA 1 cut(s) 1058
AvaII GGWCC 2 cut(s) 39, 2101
BaeGI GKGCMC 1 cut(s) 1857
BamHI GGATCC 1 cut(s) 536
BanI GGYRCC 1 cut(s) 2075
BanII GRGCYC 2 cut(s) 813, 1857
BarI GAAGNNNNNNTAC 2 cut(s) 966, 998
BbsI GAAGAC 3 cut(s) 14, 264, 1475
Bbv12I GWGCWC 2 cut(s) 813, 1246
BbvI GCAGC 8 cut(s) 555, 1087, 1998, 2062, 2269, 2287, 2296, 2420
BceAI ACGGC 2 cut(s) 366, 1588
BcgI CGANNNNNNTGC 2 cut(s) 1038, 1072
BciT130I CCWGG 5 cut(s) 606, 1257, 1378, 1389, 1782
BcnI CCSGG 3 cut(s) 521, 867, 2121
BcoDI GTCTC 7 cut(s) 77, 341, 653, 732, 955, 964, 1748
BfaI CTAG 4 cut(s) 203, 254, 1305, 2217
BfoI RGCGCY 1 cut(s) 549
BglI GCCNNNNNGGC 1 cut(s) 867
BglII AGATCT 2 cut(s) 1669, 2224
Bme1390I CCNGG 8 cut(s) 521, 606, 867, 1257, 1378, 1389, 1782, 2121
Bme18I GGWCC 2 cut(s) 39, 2101
BmgBI CACGTC 2 cut(s) 358, 1709
BmgT120I GGNCC 9 cut(s) 39, 725, 860, 1401, 1775, 1853, 1854, 2101, 2118
BmiI GGNNCC 9 cut(s) 41, 489, 538, 726, 862, 1402, 1854, 1855, 2077
BmrFI CCNGG 8 cut(s) 521, 606, 867, 1257, 1378, 1389, 1782, 2121
BpiI GAAGAC 3 cut(s) 14, 264, 1475
BpmI CTGGAG 2 cut(s) 101, 155
Bpu14I TTCGAA 1 cut(s) 1058
BpuMI CCSGG 3 cut(s) 521, 867, 2121
BsaHI GRCGYC 1 cut(s) 465
BsaI GGTCTC 1 cut(s) 77
BsaJI CCNNGG 9 cut(s) 558, 567, 681, 728, 865, 1388, 1416, 1491, 1529
BsaXI ACNNNNNCTCC 6 cut(s) 86, 116, 479, 509, 1243, 1273
Bsc4I CCNNNNNNNGG 5 cut(s) 303, 842, 872, 1449, 1787
Bse118I RCCGGY 1 cut(s) 911
Bse1I ACTGG 2 cut(s) 172, 2400
Bse3DI GCAATG 4 cut(s) 385, 897, 1437, 1513
BseBI CCWGG 5 cut(s) 606, 1257, 1378, 1389, 1782
BseDI CCNNGG 9 cut(s) 558, 567, 681, 728, 865, 1388, 1416, 1491, 1529
BseLI CCNNNNNNNGG 5 cut(s) 303, 842, 872, 1449, 1787
BseMI GCAATG 4 cut(s) 385, 897, 1437, 1513
BseMII CTCAG 4 cut(s) 975, 1713, 2219, 2328
BseNI ACTGG 2 cut(s) 172, 2400
BseRI GAGGAG 7 cut(s) 94, 97, 316, 341, 437, 584, 782
BseSI GKGCMC 1 cut(s) 1857
BseX3I CGGCCG 1 cut(s) 564
BseXI GCAGC 8 cut(s) 555, 1087, 1998, 2062, 2269, 2287, 2296, 2420
BsgI GTGCAG 1 cut(s) 2268
Bsh1236I CGCG 1 cut(s) 612
Bsh1285I CGRYCG 1 cut(s) 567
BshNI GGYRCC 1 cut(s) 2075
BsiEI CGRYCG 1 cut(s) 567
BsiHKAI GWGCWC 2 cut(s) 813, 1246
BsiSI CCGG 5 cut(s) 491, 520, 867, 912, 2121
BslFI GGGAC 1 cut(s) 25
BslI CCNNNNNNNGG 5 cut(s) 303, 842, 872, 1449, 1787
BsmAI GTCTC 7 cut(s) 77, 341, 653, 732, 955, 964, 1748
BsmBI CGTCTC 2 cut(s) 341, 955
BsmFI GGGAC 1 cut(s) 25
BsmI GAATGC 1 cut(s) 915
Bso31I GGTCTC 1 cut(s) 77
Bsp119I TTCGAA 1 cut(s) 1058
Bsp120I GGGCCC 1 cut(s) 1853
Bsp1286I GDGCHC 3 cut(s) 813, 1246, 1857
Bsp19I CCATGG 2 cut(s) 1491, 1529
Bsp68I TCGCGA 1 cut(s) 612
BspCNI CTCAG 4 cut(s) 974, 1714, 2220, 2329
BspFNI CGCG 1 cut(s) 612
BspLI GGNNCC 9 cut(s) 41, 489, 538, 726, 862, 1402, 1854, 1855, 2077
BspPI GGATC 3 cut(s) 531, 544, 694
BspT104I TTCGAA 1 cut(s) 1058
BspT107I GGYRCC 1 cut(s) 2075
BspTNI GGTCTC 1 cut(s) 77
BsrBI CCGCTC 2 cut(s) 102, 2008
BsrDI GCAATG 4 cut(s) 385, 897, 1437, 1513
BsrFI RCCGGY 1 cut(s) 911
BsrI ACTGG 2 cut(s) 172, 2400
BssAI RCCGGY 1 cut(s) 911
BssECI CCNNGG 9 cut(s) 558, 567, 681, 728, 865, 1388, 1416, 1491, 1529
BssNAI GTATAC 1 cut(s) 1940
BssNI GRCGYC 1 cut(s) 465
BssT1I CCWWGG 5 cut(s) 558, 681, 1416, 1491, 1529
Bst1107I GTATAC 1 cut(s) 1940
Bst2UI CCWGG 5 cut(s) 606, 1257, 1378, 1389, 1782
Bst4CI ACNGT 3 cut(s) 1241, 1271, 2105
Bst6I CTCTTC 3 cut(s) 414, 1506, 2313
BstACI GRCGYC 1 cut(s) 465
BstBI TTCGAA 1 cut(s) 1058
BstDEI CTNAG 7 cut(s) 742, 961, 1247, 1722, 2228, 2337, 2400
BstDSI CCRYGG 2 cut(s) 1491, 1529
BstFNI CGCG 1 cut(s) 612
BstH2I RGCGCY 1 cut(s) 549
BstHHI GCGC 3 cut(s) 355, 548, 2045
BstMAI GTCTC 7 cut(s) 77, 341, 653, 732, 955, 964, 1748
BstMCI CGRYCG 1 cut(s) 567
BstNI CCWGG 5 cut(s) 606, 1257, 1378, 1389, 1782
BstNSI RCATGY 1 cut(s) 1929
BstSCI CCNGG 8 cut(s) 519, 604, 865, 1255, 1376, 1387, 1780, 2119
BstSLI GKGCMC 1 cut(s) 1857
BstUI CGCG 1 cut(s) 612
BstV1I GCAGC 8 cut(s) 555, 1087, 1998, 2062, 2269, 2287, 2296, 2420
BstV2I GAAGAC 3 cut(s) 14, 264, 1475
BstX2I RGATCY 3 cut(s) 536, 1669, 2224
BstXI CCANNNNNNTGG 2 cut(s) 322, 380
BstYI RGATCY 3 cut(s) 536, 1669, 2224
BstZ17I GTATAC 1 cut(s) 1940
BstZI CGGCCG 1 cut(s) 564
BtgI CCRYGG 2 cut(s) 1491, 1529
BtrI CACGTC 2 cut(s) 358, 1709
BtsIMutI CAGTG 4 cut(s) 1796, 2272, 2285, 2393
BtuMI TCGCGA 1 cut(s) 612
CaiI CAGNNNCTG 1 cut(s) 2414
CfoI GCGC 3 cut(s) 355, 548, 2045
Cfr10I RCCGGY 1 cut(s) 911
Cfr13I GGNCC 9 cut(s) 39, 725, 860, 1401, 1775, 1853, 1854, 2101, 2118
CseI GACGC 1 cut(s) 473
CviAII CATG 9 cut(s) 242, 893, 1120, 1444, 1492, 1530, 1926, 1935, 2361
DdeI CTNAG 7 cut(s) 742, 961, 1247, 1722, 2228, 2337, 2400
DrdI GACNNNNNNGTC 2 cut(s) 122, 1477
DseDI GACNNNNNNGTC 2 cut(s) 122, 1477
EaeI YGGCCR 1 cut(s) 564
EagI CGGCCG 1 cut(s) 564
Eam1104I CTCTTC 3 cut(s) 414, 1506, 2313
EarI CTCTTC 3 cut(s) 414, 1506, 2313
EciI GGCGGA 2 cut(s) 322, 2007
Ecl136II GAGCTC 1 cut(s) 811
EclXI CGGCCG 1 cut(s) 564
Eco130I CCWWGG 5 cut(s) 558, 681, 1416, 1491, 1529
Eco147I AGGCCT 2 cut(s) 1225, 1255
Eco24I GRGCYC 2 cut(s) 813, 1857
Eco31I GGTCTC 1 cut(s) 77
Eco47I GGWCC 2 cut(s) 39, 2101
Eco52I CGGCCG 1 cut(s) 564
Eco53kI GAGCTC 1 cut(s) 811
Eco57I CTGAAG 4 cut(s) 381, 696, 794, 1560
EcoICRI GAGCTC 1 cut(s) 811
EcoO109I RGGNCCY 2 cut(s) 39, 1853
EcoRII CCWGG 5 cut(s) 604, 1255, 1376, 1387, 1780
EcoT14I CCWWGG 5 cut(s) 558, 681, 1416, 1491, 1529
EcoT22I ATGCAT 2 cut(s) 1966, 2356
EcoT38I GRGCYC 2 cut(s) 813, 1857
ErhI CCWWGG 5 cut(s) 558, 681, 1416, 1491, 1529
Esp3I CGTCTC 2 cut(s) 341, 955
FaeI CATG 9 cut(s) 245, 896, 1123, 1447, 1495, 1533, 1929, 1938, 2364
FaqI GGGAC 1 cut(s) 25
FatI CATG 9 cut(s) 241, 892, 1119, 1443, 1491, 1529, 1925, 1934, 2360
FauI CCCGC 3 cut(s) 26, 822, 1971
FblI GTMKAC 5 cut(s) 126, 282, 446, 1382, 1939
FriOI GRGCYC 2 cut(s) 813, 1857
FspBI CTAG 4 cut(s) 203, 254, 1305, 2217
GlaI GCGC 3 cut(s) 354, 547, 2044
GsuI CTGGAG 2 cut(s) 101, 155
HaeII RGCGCY 1 cut(s) 549
HapII CCGG 5 cut(s) 491, 520, 867, 912, 2121
HgaI GACGC 1 cut(s) 473
HhaI GCGC 3 cut(s) 355, 548, 2045
Hin1I GRCGYC 1 cut(s) 465
Hin1II CATG 9 cut(s) 245, 896, 1123, 1447, 1495, 1533, 1929, 1938, 2364
Hin6I GCGC 3 cut(s) 353, 546, 2043
HinP1I GCGC 3 cut(s) 353, 546, 2043
HincII GTYRAC 4 cut(s) 283, 447, 1237, 1383
HindII GTYRAC 4 cut(s) 283, 447, 1237, 1383
HindIII AAGCTT 1 cut(s) 1002
HpaII CCGG 5 cut(s) 491, 520, 867, 912, 2121
HphI GGTGA 7 cut(s) 172, 395, 721, 772, 796, 1923, 2465
Hpy166II GTNNAC 7 cut(s) 127, 283, 447, 1237, 1383, 1940, 2135
Hpy188III TCNNGA 8 cut(s) 80, 113, 611, 696, 806, 1292, 1721, 2315
Hpy8I GTNNAC 7 cut(s) 127, 283, 447, 1237, 1383, 1940, 2135
Hpy99I CGWCG 5 cut(s) 119, 266, 467, 1609, 2058
HpyCH4III ACNGT 3 cut(s) 1241, 1271, 2105
HpyCH4IV ACGT 2 cut(s) 357, 1708
HpyF3I CTNAG 7 cut(s) 742, 961, 1247, 1722, 2228, 2337, 2400
HpySE526I ACGT 2 cut(s) 357, 1708
Hsp92I GRCGYC 1 cut(s) 465
Hsp92II CATG 9 cut(s) 245, 896, 1123, 1447, 1495, 1533, 1929, 1938, 2364
HspAI GCGC 3 cut(s) 353, 546, 2043
LmnI GCTCC 8 cut(s) 107, 174, 487, 769, 816, 1211, 1829, 2270
Lsp1109I GCAGC 8 cut(s) 555, 1087, 1998, 2062, 2269, 2287, 2296, 2420
MaeI CTAG 4 cut(s) 203, 254, 1305, 2217
MaeII ACGT 2 cut(s) 357, 1708
MaeIII GTNAC 3 cut(s) 1099, 1433, 2416
MbiI CCGCTC 2 cut(s) 102, 2008
MfeI CAATTG 2 cut(s) 1023, 1050
MflI RGATCY 3 cut(s) 536, 1669, 2224
MhlI GDGCHC 3 cut(s) 813, 1246, 1857
MlyI GAGTC 2 cut(s) 200, 449
MmeI TCCRAC 1 cut(s) 1858
Mph1103I ATGCAT 2 cut(s) 1966, 2356
MroXI GAANNNNTTC 1 cut(s) 1596
MseI TTAA 7 cut(s) 1311, 1368, 1676, 1713, 1848, 1967, 2183
MslI CAYNNNNRTG 2 cut(s) 1442, 2359
MspA1I CMGCKG 2 cut(s) 817, 1151
MspI CCGG 5 cut(s) 491, 520, 867, 912, 2121
MspR9I CCNGG 8 cut(s) 521, 606, 867, 1257, 1378, 1389, 1782, 2121
MunI CAATTG 2 cut(s) 1023, 1050
Mva1269I GAATGC 1 cut(s) 915
MvaI CCWGG 5 cut(s) 606, 1257, 1378, 1389, 1782
MvnI CGCG 1 cut(s) 612
NciI CCSGG 3 cut(s) 521, 867, 2121
NcoI CCATGG 2 cut(s) 1491, 1529
NlaIII CATG 9 cut(s) 245, 896, 1123, 1447, 1495, 1533, 1929, 1938, 2364
NlaIV GGNNCC 9 cut(s) 41, 489, 538, 726, 862, 1402, 1854, 1855, 2077
NmeAIII GCCGAG 2 cut(s) 592, 753
NmuCI GTSAC 1 cut(s) 1099
NruI TCGCGA 1 cut(s) 612
NsiI ATGCAT 2 cut(s) 1966, 2356
NspI RCATGY 1 cut(s) 1929
NspV TTCGAA 1 cut(s) 1058
PceI AGGCCT 2 cut(s) 1225, 1255
PcsI WCGNNNNNNNCGW 2 cut(s) 120, 1267
PctI GAATGC 1 cut(s) 915
PdmI GAANNNNTTC 1 cut(s) 1596
PfeI GAWTC 8 cut(s) 367, 847, 1127, 1160, 1315, 1623, 2017, 2375
PflMI CCANNNNNTGG 1 cut(s) 842
PfoI TCCNGGA 1 cut(s) 1780
PleI GAGTC 2 cut(s) 200, 449
PpsI GAGTC 2 cut(s) 200, 449
PpuMI RGGWCCY 1 cut(s) 39
PsiI TTATAA 1 cut(s) 927
Psp124BI GAGCTC 1 cut(s) 813
Psp5II RGGWCCY 1 cut(s) 39
Psp6I CCWGG 5 cut(s) 604, 1255, 1376, 1387, 1780
PspGI CCWGG 5 cut(s) 604, 1255, 1376, 1387, 1780
PspN4I GGNNCC 9 cut(s) 41, 489, 538, 726, 862, 1402, 1854, 1855, 2077
PspOMI GGGCCC 1 cut(s) 1853
PspPI GGNCC 9 cut(s) 39, 725, 860, 1401, 1775, 1853, 1854, 2101, 2118
PspPPI RGGWCCY 1 cut(s) 39
PstNI CAGNNNCTG 1 cut(s) 2414
PsuI RGATCY 3 cut(s) 536, 1669, 2224
PvuII CAGCTG 1 cut(s) 1151
RruI TCGCGA 1 cut(s) 612
RseI CAYNNNNRTG 2 cut(s) 1442, 2359
SacI GAGCTC 1 cut(s) 813
SalI GTCGAC 3 cut(s) 281, 445, 1381
SaqAI TTAA 7 cut(s) 1311, 1368, 1676, 1713, 1848, 1967, 2183
Sau96I GGNCC 9 cut(s) 39, 725, 860, 1401, 1775, 1853, 1854, 2101, 2118
SchI GAGTC 2 cut(s) 200, 449
ScrFI CCNGG 8 cut(s) 521, 606, 867, 1257, 1378, 1389, 1782, 2121
SduI GDGCHC 3 cut(s) 813, 1246, 1857
SfuI TTCGAA 1 cut(s) 1058
SinI GGWCC 2 cut(s) 39, 2101
SmiMI CAYNNNNRTG 2 cut(s) 1442, 2359
SseBI AGGCCT 2 cut(s) 1225, 1255
SspMI CTAG 4 cut(s) 203, 254, 1305, 2217
SstI GAGCTC 1 cut(s) 813
StuI AGGCCT 2 cut(s) 1225, 1255
StyD4I CCNGG 8 cut(s) 519, 604, 865, 1255, 1376, 1387, 1780, 2119
StyI CCWWGG 5 cut(s) 558, 681, 1416, 1491, 1529
TaaI ACNGT 3 cut(s) 1241, 1271, 2105
TaiI ACGT 2 cut(s) 360, 1711
TaqI TCGA 8 cut(s) 24, 114, 282, 446, 512, 1058, 1261, 1382
TauI GCSGC 4 cut(s) 566, 796, 2011, 2119
TfiI GAWTC 8 cut(s) 367, 847, 1127, 1160, 1315, 1623, 2017, 2375
Tru1I TTAA 7 cut(s) 1311, 1368, 1676, 1713, 1848, 1967, 2183
Tru9I TTAA 7 cut(s) 1311, 1368, 1676, 1713, 1848, 1967, 2183
TscAI CASTG 4 cut(s) 1803, 2272, 2292, 2400
TseFI GTSAC 1 cut(s) 1099
TseI GCWGC 8 cut(s) 543, 1075, 2011, 2050, 2282, 2300, 2309, 2408
Tsp45I GTSAC 1 cut(s) 1099
TspGWI ACGGA 1 cut(s) 59
TspRI CASTG 4 cut(s) 1803, 2272, 2292, 2400
Van91I CCANNNNNTGG 1 cut(s) 842
VpaK11BI GGWCC 2 cut(s) 39, 2101
XapI RAATTY 3 cut(s) 1736, 1834, 2260
XceI RCATGY 1 cut(s) 1929
XcmI CCANNNNNNNNNTGG 1 cut(s) 1644
XmiI GTMKAC 5 cut(s) 126, 282, 446, 1382, 1939
XmnI GAANNNNTTC 1 cut(s) 1596
XspI CTAG 4 cut(s) 203, 254, 1305, 2217
Zsp2I ATGCAT 2 cut(s) 1966, 2356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.