Rw6G043830

Cell division control protein 48 homolog C-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0007658
Physical Location & Seq
Reverse (-)
67009509 .. 67015102
5594 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G043830.1

Sequence Viewer

Length: 2457 bp
ATGAAGCCGGGAAAGAGGTCTGGCGGAGTAGGAGGAGGGAGGTCGTCGTTTTCCGATAGAAGGCTGAACGAGTTTCGGACTCGGCTGGAGTCGTCCACCGAGTTAGACCACAGGTCCTCCGTGGACGAAATCGTTGACCATCTCCGCGGCGGTTACCCGGACTACGAGCGACTCAAGCGTCAGGTTTTCAGAAGGTTCGTCTCGCAAACCCTAGCCTCTCCCTCGTTCAAGCGCTCGAAGCCCCTACCGGTTATGAGCGGCTCATCGGAAGAAGAAGAAGTGGAGCTGGCCGGAAGTAAGAGGCGGAAGCGTGCTCGGAATGAGAGGGAAGGGAGACTGCAGCAGATAGAGGAAGCGCACGTTCGGAAAAGTAGGCAGAGCAATGGTAATGTGCCGTCTCCATCGTCGTCGTCGTCGTCGTCAGCTTCGGAGGACGAAGGAGATGAGGAGTCTACGTCGGAGGACGCGATATACGGCGAGGAATTGGAGCCGAAGTTTGATTTGATGAAATCGATGCTGCGGGAGGCGTATACGGATCCGAAAAGCGGCGGGAAATCCAAGGCGGCGGAGCAGCAGAAGGAGAAGAATGTGGAAATGGATATTCCAGGGCGGGAGAAGGTTAAATTAGTGGCGGGAAGTAGAGGGCCGAGGCCGGAGAGTGTGTCGAATAAGGCCGAGAGTGAGGCCAAGAGCTCTATTTCGAGAGGTGTTGAGGTGAAGAGGAATGAGGGGCCGAAGTTTAGTGACTTGGGTGGAATGCAGAAAGTGCTGGAGGAGCTGAACAAGGAGGTTATTAGGCCGCTTCGCCGGTCGTGGCTGCCGCAGTGGCTCGGAGTTAGGCCAATGTCTGGGATTTTGTTGTGTGGACCACCAGGGTGTGGGAAGACTACTTTGGCTCATGCCATTGCCAATGAGACTGGCATTCCCTTCTATAAGATTTCGGCCACTGAAGTGGTCTCGGGAGTTTCAGGTGCATCTGAAGAAAACATACGAGATCTTTTTTCAAAAGCATATAGAACTGCCCCTTCAATTGTTTTTATTGATGAAATTGATGCAATTGCTTCGAAAAGAGAAAATATGCAAAGGGAAATGGAGAAGCGAATGGTTACACAACTGATGACTTGCATGGATCAATCTCATAGACCAGTACAGGCAGAAGATGCAAATTCTGACTCACAAAGTTCAGATCAGGCATCTGGCTATGTTCTTGTTATTGGAGCCACGAATAGGCCTGATGCTGTTGACCCTGCATTAAGGAGGCCTGGGCGATTTGGTCGTGAGATTCTTTTGGGTGTTCCAGATGAAAATTCAAGGCTTGAGATTCTGTCTGTGCTTACTCGCAAGCTAAAACTTGAAGGTTCTTTTGATCTTCTAAAGATTGCTAGGTCCACACCAGGGTATGTTGGAGCTGATTTGGCAGAGCTGGCCGACAGGGCAGGTAACATTGCCATGAACAGGATTTTTGATGAAATTGATTCAACCATTGAGGAAGGCAAGGAAGATTTCTGCCGGCAACCTGAAGAAATGGAAAAATATGCCATCAGTATGGCTGATTTTGAGGAAGCAGTTCAAGTCGTTCAACCTTCGTCAAAAAGAGAGGGATTCTCGGCAATTCCTAATGTGAAATGGGAAAATGTTGGTGGGCTAGATCTCTTGAGGAAGGAATTCGACCGTTACATAGTTAGGCGTATCAAACATCCTGAGAACTATGAGAAATTTGGAGTAAATTCAGAGACAGGTTTCTTGCTGTATGGGCCTCCCGGATGTGGAAAAACACTAATAGCAAAGGCCGTTGCTAATGAAGCAGGAGCCAATTTCATTTATATTAAAGGCCCTGAACTTCTGAATAAATATGTTGGAGAAAGTGAACTGGCAGTCCGGACATTATTTACTCGTGCAAGGACATGCTCACCATGCATACTTTTCTTTGATGAGGTGGATGCTTTGACAACAAGGCGGGGAAAAGAAGGGGGGTGGGTTGTTGAGCGGTTATTGAACCAGTTACTTATAGAGTTAGATGGTGCAGACCAGCGGCGGGGTGTATTTGTTGTTGGTGCCACTAATAGACCTGATGTAATGGACCGTGCCTTTTTACGGCCAGGTAGGTTTGGTAAACTAATTTATGTCGCCCCGCCCAACACAGATGAGCGTGGTTTGATCTTGAAAGCTATAGGAAGGAAGTATCCTGTTGATGCAAGTGTAGATCTGGGTGAGATTGGAAAATGGAAGGCTTGTGAAAATTTTAGCGGAGCTGATCTTGCTGCACTGATGGATGAAGCTGCTATGGCTGCTCTTGAAGAGAAAGAGACATCAGCCGAGAGTTCAGATGCATCTTTGTGGACAATTAAAGAAACTCACTTTCAACCAGCACTGGCAAAAATCATACCATCTCTAACAGAAAGGATGATGGATTATATATCTGTACCCATCAACGTTCAGATTGGTCACAGTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
AAA Nucleolin_bd

Protein Analysis

818

Amino Acids

90.68

Weight (kDa)

5.96

Isoelectric Point (pI)

52.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RuvB_N PF05496 282 - 367 4.5e-07 Holliday junction DNA helicase RuvB P-loop domain
AAA PF00004 285 - 431 7.2e-41 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 455 - 493 2.1e-09 AAA+ lid domain
AAA PF00004 582 - 709 1.1e-41 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 733 - 776 3.3e-09 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 177
Acc36I ACCTGC 1 cut(s) 1427
AccB1I GGYRCC 1 cut(s) 2054
AccB7I CCANNNNNTGG 2 cut(s) 848, 878
AccBSI CCGCTC 2 cut(s) 258, 1987
AccI GTMKAC 2 cut(s) 452, 530
AccII CGCG 2 cut(s) 147, 467
AccIII TCCGGA 1 cut(s) 1878
AclI AACGTT 1 cut(s) 2433
AclWI GGATC 3 cut(s) 530, 543, 1137
AcoI YGGCCR 4 cut(s) 288, 942, 1425, 2096
AcsI RAATTY 6 cut(s) 1165, 1306, 1664, 1715, 1726, 2239
AcuI CTGAAG 3 cut(s) 969, 999, 1539
AfaI GTAC 2 cut(s) 1149, 2424
AfeI AGCGCT 1 cut(s) 233
AgeI ACCGGT 1 cut(s) 247
AhdI GACNNNNNGTC 1 cut(s) 112
AjnI CCWGG 5 cut(s) 604, 871, 1261, 1393, 2098
AjuI GAANNNNNNNTTGG 2 cut(s) 875, 907
AleI CACNNNNGTG 2 cut(s) 874, 950
AloI GAACNNNNNNTCC 2 cut(s) 1860, 1892
Alw21I GWGCWC 2 cut(s) 316, 695
Alw26I GTCTC 7 cut(s) 205, 328, 402, 908, 961, 1727, 2300
AlwI GGATC 3 cut(s) 530, 543, 1137
Ama87I CYCGRG 1 cut(s) 958
Aor13HI TCCGGA 1 cut(s) 1878
Aor51HI AGCGCT 1 cut(s) 233
ApeKI GCWGC 7 cut(s) 340, 517, 571, 817, 2261, 2279, 2288
ApoI RAATTY 6 cut(s) 1165, 1306, 1664, 1715, 1726, 2239
AsiGI ACCGGT 1 cut(s) 247
Asp700I GAANNNNTTC 2 cut(s) 1566, 1664
AspLEI GCGC 2 cut(s) 234, 358
AspS9I GGNCC 8 cut(s) 114, 644, 731, 866, 1386, 1754, 1832, 2080
AsuC2I CCSGG 3 cut(s) 9, 158, 1761
AsuHPI GGTGA 3 cut(s) 727, 1902, 2222
AsuII TTCGAA 1 cut(s) 1064
AvaI CYCGRG 1 cut(s) 958
AvaII GGWCC 4 cut(s) 114, 866, 1386, 2080
BamHI GGATCC 1 cut(s) 535
BanI GGYRCC 1 cut(s) 2054
BanII GRGCYC 1 cut(s) 695
BarI GAAGNNNNNNTAC 2 cut(s) 972, 1004
BauI CACGAG 1 cut(s) 1893
BbsI GAAGAC 1 cut(s) 890
Bbv12I GWGCWC 2 cut(s) 316, 695
BbvI GCAGC 7 cut(s) 352, 504, 583, 804, 2248, 2266, 2275
BccI CCATC 8 cut(s) 147, 409, 1547, 2012, 2263, 2395, 2401, 2435
BceAI ACGGC 4 cut(s) 379, 490, 1775, 2111
BcgI CGANNNNNNTGC 2 cut(s) 1044, 1078
BciT130I CCWGG 5 cut(s) 606, 873, 1263, 1395, 2100
BciVI GTATCC 1 cut(s) 2193
BcnI CCSGG 3 cut(s) 9, 158, 1761
BcoDI GTCTC 7 cut(s) 205, 328, 402, 908, 961, 1727, 2300
BfaI CTAG 3 cut(s) 212, 1383, 1646
BfmI CTRYAG 2 cut(s) 338, 2169
BfoI RGCGCY 1 cut(s) 235
BfuAI ACCTGC 1 cut(s) 1427
BfuI GTATCC 1 cut(s) 2193
BglI GCCNNNNNGGC 2 cut(s) 826, 1433
BglII AGATCT 3 cut(s) 994, 1648, 2203
Bme1390I CCNGG 8 cut(s) 9, 158, 606, 873, 1263, 1395, 1761, 2100
Bme18I GGWCC 4 cut(s) 114, 866, 1386, 2080
BmeRI GACNNNNNGTC 1 cut(s) 112
BmeT110I CYCGRG 1 cut(s) 958
BmgT120I GGNCC 8 cut(s) 114, 644, 731, 866, 1386, 1754, 1832, 2080
BmiI GGNNCC 6 cut(s) 489, 537, 732, 1219, 1810, 2056
BmrFI CCNGG 8 cut(s) 9, 158, 606, 873, 1263, 1395, 1761, 2100
BpiI GAAGAC 1 cut(s) 890
BplI GAGNNNNNCTC 2 cut(s) 1589, 1621
BpmI CTGGAG 2 cut(s) 107, 791
Bpu14I TTCGAA 1 cut(s) 1064
BpuEI CTTGAG 3 cut(s) 158, 1337, 1675
BpuMI CCSGG 3 cut(s) 9, 158, 1761
Bsa29I ATCGAT 1 cut(s) 512
BsaI GGTCTC 1 cut(s) 961
BsaJI CCNNGG 8 cut(s) 120, 145, 558, 605, 647, 872, 1262, 1394
BsaWI WCCGGW 2 cut(s) 247, 1878
BsaXI ACNNNNNCTCC 8 cut(s) 101, 131, 440, 470, 479, 509, 647, 677
Bse118I RCCGGY 3 cut(s) 247, 807, 1509
Bse1I ACTGG 5 cut(s) 922, 1145, 1875, 1999, 2376
Bse3DI GCAATG 3 cut(s) 388, 903, 1443
BseAI TCCGGA 1 cut(s) 1878
BseBI CCWGG 5 cut(s) 606, 873, 1263, 1395, 2100
BseCI ATCGAT 1 cut(s) 512
BseDI CCNNGG 8 cut(s) 120, 145, 558, 605, 647, 872, 1262, 1394
BseGI GGATG 5 cut(s) 1696, 1769, 1945, 2278, 2409
BseMI GCAATG 3 cut(s) 388, 903, 1443
BseMII CTCAG 1 cut(s) 1692
BseNI ACTGG 5 cut(s) 922, 1145, 1875, 1999, 2376
BseRI GAGGAG 3 cut(s) 48, 461, 788
BseXI GCAGC 7 cut(s) 352, 504, 583, 804, 2248, 2266, 2275
BsgI GTGCAG 2 cut(s) 2043, 2247
Bsh1236I CGCG 2 cut(s) 147, 467
Bsh1285I CGRYCG 2 cut(s) 812, 1672
BshNI GGYRCC 1 cut(s) 2054
BshTI ACCGGT 1 cut(s) 247
BshVI ATCGAT 1 cut(s) 512
BsiEI CGRYCG 2 cut(s) 812, 1672
BsiHKAI GWGCWC 2 cut(s) 316, 695
BsiHKCI CYCGRG 1 cut(s) 958
BsiSI CCGG 9 cut(s) 8, 158, 248, 291, 653, 808, 1510, 1761, 1879
BsmAI GTCTC 7 cut(s) 205, 328, 402, 908, 961, 1727, 2300
BsmBI CGTCTC 2 cut(s) 205, 402
BsmI GAATGC 2 cut(s) 762, 921
Bso31I GGTCTC 1 cut(s) 961
BsoBI CYCGRG 1 cut(s) 958
Bsp119I TTCGAA 1 cut(s) 1064
Bsp1286I GDGCHC 2 cut(s) 316, 695
Bsp13I TCCGGA 1 cut(s) 1878
Bsp143I GATC 9 cut(s) 535, 994, 1129, 1186, 1366, 1648, 2157, 2203, 2254
BspCNI CTCAG 1 cut(s) 1693
BspDI ATCGAT 1 cut(s) 512
BspEI TCCGGA 1 cut(s) 1878
BspFNI CGCG 2 cut(s) 147, 467
BspLI GGNNCC 6 cut(s) 489, 537, 732, 1219, 1810, 2056
BspMAI CTGCAG 1 cut(s) 342
BspMI ACCTGC 1 cut(s) 1427
BspPI GGATC 3 cut(s) 530, 543, 1137
BspT104I TTCGAA 1 cut(s) 1064
BspT107I GGYRCC 1 cut(s) 2054
BspTNI GGTCTC 1 cut(s) 961
BsrBI CCGCTC 2 cut(s) 258, 1987
BsrDI GCAATG 3 cut(s) 388, 903, 1443
BsrFI RCCGGY 3 cut(s) 247, 807, 1509
BsrI ACTGG 5 cut(s) 922, 1145, 1875, 1999, 2376
BssAI RCCGGY 3 cut(s) 247, 807, 1509
BssECI CCNNGG 8 cut(s) 120, 145, 558, 605, 647, 872, 1262, 1394
BssMI GATC 9 cut(s) 535, 994, 1129, 1186, 1366, 1648, 2157, 2203, 2254
BssNAI GTATAC 1 cut(s) 531
BssSI CACGAG 1 cut(s) 1893
BssT1I CCWWGG 1 cut(s) 558
Bst1107I GTATAC 1 cut(s) 531
Bst2BI CACGAG 1 cut(s) 1893
Bst2UI CCWGG 5 cut(s) 606, 873, 1263, 1395, 2100
Bst4CI ACNGT 3 cut(s) 1673, 2084, 2450
Bst6I CTCTTC 2 cut(s) 713, 2292
BstAPI GCANNNNNTGC 2 cut(s) 766, 1160
BstBI TTCGAA 1 cut(s) 1064
BstC8I GCNNGC 5 cut(s) 288, 312, 1343, 1425, 1511
BstDEI CTNAG 1 cut(s) 1701
BstDSI CCRYGG 2 cut(s) 120, 145
BstEII GGTNACC 1 cut(s) 152
BstF5I GGATG 5 cut(s) 1696, 1769, 1945, 2278, 2409
BstFNI CGCG 2 cut(s) 147, 467
BstH2I RGCGCY 1 cut(s) 235
BstHHI GCGC 2 cut(s) 234, 358
BstKTI GATC 9 cut(s) 538, 997, 1132, 1189, 1369, 1651, 2160, 2206, 2257
BstMAI GTCTC 7 cut(s) 205, 328, 402, 908, 961, 1727, 2300
BstMBI GATC 9 cut(s) 535, 994, 1129, 1186, 1366, 1648, 2157, 2203, 2254
BstMCI CGRYCG 2 cut(s) 812, 1672
BstNI CCWGG 5 cut(s) 606, 873, 1263, 1395, 2100
BstNSI RCATGY 1 cut(s) 1908
BstPI GGTNACC 1 cut(s) 152
BstSCI CCNGG 8 cut(s) 7, 156, 604, 871, 1261, 1393, 1759, 2098
BstSFI CTRYAG 2 cut(s) 338, 2169
BstUI CGCG 2 cut(s) 147, 467
BstV1I GCAGC 7 cut(s) 352, 504, 583, 804, 2248, 2266, 2275
BstV2I GAAGAC 1 cut(s) 890
BstX2I RGATCY 4 cut(s) 535, 994, 1648, 2203
BstXI CCANNNNNNTGG 2 cut(s) 952, 1546
BstYI RGATCY 4 cut(s) 535, 994, 1648, 2203
BstZ17I GTATAC 1 cut(s) 531
Bsu15I ATCGAT 1 cut(s) 512
BsuI GTATCC 1 cut(s) 2193
BsuTUI ATCGAT 1 cut(s) 512
BtgI CCRYGG 2 cut(s) 120, 145
BtsCI GGATG 5 cut(s) 1696, 1769, 1945, 2278, 2409
BtsI GCAGTG 1 cut(s) 830
BtsIMutI CAGTG 4 cut(s) 830, 945, 2264, 2369
BveI ACCTGC 1 cut(s) 1427
Cac8I GCNNGC 5 cut(s) 288, 312, 1343, 1425, 1511
CfoI GCGC 2 cut(s) 234, 358
Cfr10I RCCGGY 3 cut(s) 247, 807, 1509
Cfr13I GGNCC 8 cut(s) 114, 644, 731, 866, 1386, 1754, 1832, 2080
Cfr42I CCGCGG 1 cut(s) 148
ClaI ATCGAT 1 cut(s) 512
CseI GACGC 2 cut(s) 167, 473
Csp6I GTAC 2 cut(s) 1148, 2423
CspAI ACCGGT 1 cut(s) 247
CviAII CATG 5 cut(s) 899, 1126, 1450, 1905, 1914
CviQI GTAC 2 cut(s) 1148, 2423
DdeI CTNAG 1 cut(s) 1701
DpnI GATC 9 cut(s) 537, 996, 1131, 1188, 1368, 1650, 2159, 2205, 2256
DpnII GATC 9 cut(s) 535, 994, 1129, 1186, 1366, 1648, 2157, 2203, 2254
DrdI GACNNNNNNGTC 1 cut(s) 177
DriI GACNNNNNGTC 1 cut(s) 112
DseDI GACNNNNNNGTC 1 cut(s) 177
EaeI YGGCCR 4 cut(s) 288, 942, 1425, 2096
Eam1104I CTCTTC 2 cut(s) 713, 2292
Eam1105I GACNNNNNGTC 1 cut(s) 112
EarI CTCTTC 2 cut(s) 713, 2292
EciI GGCGGA 3 cut(s) 39, 319, 581
Ecl136II GAGCTC 1 cut(s) 693
Eco130I CCWWGG 1 cut(s) 558
Eco147I AGGCCT 2 cut(s) 1231, 1261
Eco24I GRGCYC 1 cut(s) 695
Eco31I GGTCTC 1 cut(s) 961
Eco47I GGWCC 4 cut(s) 114, 866, 1386, 2080
Eco47III AGCGCT 1 cut(s) 233
Eco53kI GAGCTC 1 cut(s) 693
Eco57I CTGAAG 3 cut(s) 969, 999, 1539
Eco88I CYCGRG 1 cut(s) 958
Eco91I GGTNACC 1 cut(s) 152
EcoICRI GAGCTC 1 cut(s) 693
EcoO109I RGGNCCY 2 cut(s) 114, 1832
EcoO65I GGTNACC 1 cut(s) 152
EcoRI GAATTC 1 cut(s) 1664
EcoRII CCWGG 5 cut(s) 604, 871, 1261, 1393, 2098
EcoT14I CCWWGG 1 cut(s) 558
EcoT22I ATGCAT 2 cut(s) 1919, 2332
EcoT38I GRGCYC 1 cut(s) 695
ErhI CCWWGG 1 cut(s) 558
Esp3I CGTCTC 2 cut(s) 205, 402
FaeI CATG 5 cut(s) 902, 1129, 1453, 1908, 1917
FatI CATG 5 cut(s) 898, 1125, 1449, 1904, 1913
FauI CCCGC 7 cut(s) 513, 542, 603, 625, 1950, 2028, 2139
FblI GTMKAC 2 cut(s) 452, 530
FokI GGATG 5 cut(s) 1683, 1776, 1952, 2285, 2416
FriOI GRGCYC 1 cut(s) 695
FspBI CTAG 3 cut(s) 212, 1383, 1646
GlaI GCGC 2 cut(s) 233, 357
GsuI CTGGAG 2 cut(s) 107, 791
HaeII RGCGCY 1 cut(s) 235
HapII CCGG 9 cut(s) 8, 158, 248, 291, 653, 808, 1510, 1761, 1879
HgaI GACGC 2 cut(s) 167, 473
HhaI GCGC 2 cut(s) 234, 358
Hin1II CATG 5 cut(s) 902, 1129, 1453, 1908, 1917
Hin6I GCGC 2 cut(s) 232, 356
HinP1I GCGC 2 cut(s) 232, 356
HincII GTYRAC 2 cut(s) 136, 1243
HindII GTYRAC 2 cut(s) 136, 1243
HinfI GANTC 9 cut(s) 79, 89, 171, 449, 1172, 1282, 1321, 1475, 1602
HpaII CCGG 9 cut(s) 8, 158, 248, 291, 653, 808, 1510, 1761, 1879
HphI GGTGA 3 cut(s) 727, 1902, 2222
Hpy188III TCNNGA 9 cut(s) 702, 960, 1277, 1298, 1654, 1700, 1879, 2161, 2294
Hpy99I CGWCG 7 cut(s) 49, 409, 412, 415, 418, 421, 460
HpyCH4III ACNGT 3 cut(s) 1673, 2084, 2450
HpyCH4IV ACGT 3 cut(s) 360, 455, 2433
HpyF3I CTNAG 1 cut(s) 1701
HpySE526I ACGT 3 cut(s) 360, 455, 2433
Hsp92II CATG 5 cut(s) 902, 1129, 1453, 1908, 1917
HspAI GCGC 2 cut(s) 232, 356
Kpn2I TCCGGA 1 cut(s) 1878
KroI GCCGGC 1 cut(s) 1509
KroNI GCCGGC 1 cut(s) 1511
KspI CCGCGG 1 cut(s) 148
Kzo9I GATC 9 cut(s) 535, 994, 1129, 1186, 1366, 1648, 2157, 2203, 2254
LmnI GCTCC 8 cut(s) 283, 487, 568, 775, 1217, 1406, 1808, 2249
Lsp1109I GCAGC 7 cut(s) 352, 504, 583, 804, 2248, 2266, 2275
MaeI CTAG 3 cut(s) 212, 1383, 1646
MaeII ACGT 3 cut(s) 360, 455, 2433
MaeIII GTNAC 7 cut(s) 152, 743, 1105, 1439, 1673, 2001, 2444
MalI GATC 9 cut(s) 537, 996, 1131, 1188, 1368, 1650, 2159, 2205, 2256
MbiI CCGCTC 2 cut(s) 258, 1987
MboI GATC 9 cut(s) 535, 994, 1129, 1186, 1366, 1648, 2157, 2203, 2254
MfeI CAATTG 2 cut(s) 1029, 1056
MflI RGATCY 4 cut(s) 535, 994, 1648, 2203
MhlI GDGCHC 2 cut(s) 316, 695
MlyI GAGTC 5 cut(s) 73, 98, 165, 458, 1166
MmeI TCCRAC 3 cut(s) 438, 1384, 1837
Mph1103I ATGCAT 2 cut(s) 1919, 2332
MroI TCCGGA 1 cut(s) 1878
MroNI GCCGGC 1 cut(s) 1509
MroXI GAANNNNTTC 2 cut(s) 1566, 1664
MseI TTAA 4 cut(s) 621, 1253, 1827, 2346
MslI CAYNNNNRTG 5 cut(s) 874, 950, 1448, 1544, 2335
MspA1I CMGCKG 2 cut(s) 147, 2032
MspI CCGG 9 cut(s) 8, 158, 248, 291, 653, 808, 1510, 1761, 1879
MspR9I CCNGG 8 cut(s) 9, 158, 606, 873, 1263, 1395, 1761, 2100
MunI CAATTG 2 cut(s) 1029, 1056
Mva1269I GAATGC 2 cut(s) 762, 921
MvaI CCWGG 5 cut(s) 606, 873, 1263, 1395, 2100
MvnI CGCG 2 cut(s) 147, 467
NaeI GCCGGC 1 cut(s) 1511
NciI CCSGG 3 cut(s) 9, 158, 1761
NdeII GATC 9 cut(s) 535, 994, 1129, 1186, 1366, 1648, 2157, 2203, 2254
NgoMIV GCCGGC 1 cut(s) 1509
NlaIII CATG 5 cut(s) 902, 1129, 1453, 1908, 1917
NlaIV GGNNCC 6 cut(s) 489, 537, 732, 1219, 1810, 2056
NmeAIII GCCGAG 5 cut(s) 61, 672, 700, 1586, 2341
NmuCI GTSAC 2 cut(s) 743, 2444
NsiI ATGCAT 2 cut(s) 1919, 2332
NspI RCATGY 1 cut(s) 1908
NspV TTCGAA 1 cut(s) 1064
OliI CACNNNNGTG 2 cut(s) 874, 950
PceI AGGCCT 2 cut(s) 1231, 1261
PcsI WCGNNNNNNNCGW 4 cut(s) 410, 413, 416, 464
PctI GAATGC 2 cut(s) 762, 921
PdiI GCCGGC 1 cut(s) 1511
PdmI GAANNNNTTC 2 cut(s) 1566, 1664
PfeI GAWTC 4 cut(s) 1282, 1321, 1475, 1602
PflMI CCANNNNNTGG 2 cut(s) 848, 878
PfoI TCCNGGA 1 cut(s) 1759
PinAI ACCGGT 1 cut(s) 247
PleI GAGTC 5 cut(s) 73, 97, 165, 457, 1166
PpsI GAGTC 5 cut(s) 73, 97, 165, 457, 1166
PpuMI RGGWCCY 1 cut(s) 114
Psp124BI GAGCTC 1 cut(s) 695
Psp1406I AACGTT 1 cut(s) 2433
Psp5II RGGWCCY 1 cut(s) 114
Psp6I CCWGG 5 cut(s) 604, 871, 1261, 1393, 2098
PspEI GGTNACC 1 cut(s) 152
PspGI CCWGG 5 cut(s) 604, 871, 1261, 1393, 2098
PspN4I GGNNCC 6 cut(s) 489, 537, 732, 1219, 1810, 2056
PspPI GGNCC 8 cut(s) 114, 644, 731, 866, 1386, 1754, 1832, 2080
PspPPI RGGWCCY 1 cut(s) 114
PstI CTGCAG 1 cut(s) 342
PsuI RGATCY 4 cut(s) 535, 994, 1648, 2203
RsaI GTAC 2 cut(s) 1149, 2424
RsaNI GTAC 2 cut(s) 1148, 2423
RseI CAYNNNNRTG 5 cut(s) 874, 950, 1448, 1544, 2335
SacI GAGCTC 1 cut(s) 695
SacII CCGCGG 1 cut(s) 148
SaqAI TTAA 4 cut(s) 621, 1253, 1827, 2346
Sau3AI GATC 9 cut(s) 535, 994, 1129, 1186, 1366, 1648, 2157, 2203, 2254
Sau96I GGNCC 8 cut(s) 114, 644, 731, 866, 1386, 1754, 1832, 2080
SchI GAGTC 5 cut(s) 73, 98, 165, 458, 1166
ScrFI CCNGG 8 cut(s) 9, 158, 606, 873, 1263, 1395, 1761, 2100
SduI GDGCHC 2 cut(s) 316, 695
SfcI CTRYAG 2 cut(s) 338, 2169
Sfr303I CCGCGG 1 cut(s) 148
SfuI TTCGAA 1 cut(s) 1064
SgrBI CCGCGG 1 cut(s) 148
SinI GGWCC 4 cut(s) 114, 866, 1386, 2080
SmiMI CAYNNNNRTG 5 cut(s) 874, 950, 1448, 1544, 2335
SmlI CTYRAG 3 cut(s) 173, 1316, 1654
SmoI CTYRAG 3 cut(s) 173, 1316, 1654
SseBI AGGCCT 2 cut(s) 1231, 1261
SspMI CTAG 3 cut(s) 212, 1383, 1646
SstI GAGCTC 1 cut(s) 695
StuI AGGCCT 2 cut(s) 1231, 1261
StyD4I CCNGG 8 cut(s) 7, 156, 604, 871, 1261, 1393, 1759, 2098
StyI CCWWGG 1 cut(s) 558
TaaI ACNGT 3 cut(s) 1673, 2084, 2450
TaiI ACGT 3 cut(s) 363, 458, 2436
TaqI TCGA 6 cut(s) 236, 512, 665, 701, 1064, 1668
TatI WGTACW 1 cut(s) 1147
TauI GCSGC 7 cut(s) 150, 261, 549, 566, 802, 823, 2035
TfiI GAWTC 4 cut(s) 1282, 1321, 1475, 1602
Tru1I TTAA 4 cut(s) 621, 1253, 1827, 2346
Tru9I TTAA 4 cut(s) 621, 1253, 1827, 2346
TscAI CASTG 4 cut(s) 830, 952, 2271, 2376
TseFI GTSAC 2 cut(s) 743, 2444
TseI GCWGC 7 cut(s) 340, 517, 571, 817, 2261, 2279, 2288
Tsp45I GTSAC 2 cut(s) 743, 2444
TspDTI ATGAA 9 cut(s) 17, 521, 1059, 1317, 1466, 1482, 1807, 1815, 2289
TspGWI ACGGA 2 cut(s) 109, 548
TspRI CASTG 4 cut(s) 830, 952, 2271, 2376
Van91I CCANNNNNTGG 2 cut(s) 848, 878
VpaK11BI GGWCC 4 cut(s) 114, 866, 1386, 2080
XapI RAATTY 6 cut(s) 1165, 1306, 1664, 1715, 1726, 2239
XceI RCATGY 1 cut(s) 1908
XmiI GTMKAC 2 cut(s) 452, 530
XmnI GAANNNNTTC 2 cut(s) 1566, 1664
XspI CTAG 3 cut(s) 212, 1383, 1646
Zsp2I ATGCAT 2 cut(s) 1919, 2332
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.