pycom09g16600

Cell division control protein 48 homolog C-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0007658
Physical Location & Seq
Reverse (-)
16907582 .. 16912774
5193 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g16600.1

Sequence Viewer

Length: 2445 bp
ATGAAGAAGACGGGAAGAAAGTTCGACGGAGGAGGGATGTCCCTCTCCGACCAAAAGCAGAAGGTTCTCCGTTGTCGTCTGGAGACCTTCAAGCACCTCCGCTCCTCCTCTCTCGACGAAATCGTCGGCAAACTTCGCACTAATTACAAAGACTACCACCGCATCAAGCTCCAGTCTTTCACCAAGTTGGTCCAGAAAACCCTAGATTCGCCTTCCTTCAAGCAATCCAAAACCCTAATCCATGTCAGCGACCTAGAAGACGACGAAGACGCTGACGAAGACGAAGATGAAGAAGTGGACCATAGCAATTCCAAGAGACGGCGGAGGGCCAATAAGATGGAGGAGAGATTGCAGCGGATAGAGACTGCGCACGTCAGAAGGATTCGCCAAAGCCATGGTGACCGTCCATCTACATCGTCTGATGATGATTATGAGGAGGAGGCGTTGTCGACATTGGACGACGCCATATATAGCGAGAAAGTGGAACCGGAGTTTGATGTGATGAAATCGAGCCTCCGAGCATCATATATGGGATCCAACAGCGCCTTGAAGCCCAAGGCGCCCGAGGACCAGAAGGAGAAGAATGTAGAAATTGAGCTTCCTGGTCGTGAGAAAGTTAAGTTGATGAGCGGAAACGGAGGGCAAGGGGGGCGAGAAACATTTCGGGAATCTGAAGCTAAGGGATCGGTTTCCAGAGATGTTGAGGTGAAGGGGAGTGAGGGGCCGAGGTTTAGAGACTTGGGTGGGTTGGAGAAGGTGATAGAGGAGCTAAAGATGGAGGTGATTGTGCCGCTTCGCCATCCAGAGCTACCACAGTGGCTCGGAGTTAGGCCAATGTCTGGGATTCTGTTGTATGGCCCGCCCGGGTGTGGCAAGACCAAATTAGCTCATGCCATTGCCAATGAAACCGGCATTCCCTTCTATAAGATTTCTGCCACCGAAGTAGTCTCTGGTGTTTCAGGTGCATCTGAAGAAAATATACGAGATCTTTTTTCTAAAGCTTACAGAACTGCCCCTTCAATTGTGTTTATTGATGAAATTGATGCAATTGCTTCAAAAAGAGAGAGTTTGCAGCGTGAGATGGAGAGGCGAATTGTCACACAACTAATGACTTGTATGGATGAATCTCATAGGCTTGTACAAACGGCTGATGAAGATTCCAACTCTCAAATTTCAGATAACAAGTCTGGCTATGTTCTTGTAATTGGAGCAACCAATAGGCCTGATGCTGTTGACCATGCTTTAAGGAGACCTGGCCGATTTGACCGTGAGATTGTTTTAGGCGTTCCAGATGAAAATGCCAGGGTTAAGATTCTTTCTGTACTTACGCGCAATCTAAAACTTGAAGGTTCTTTTGATCTTCTTAAAATAGCCAGGTCTACACCAGGGTTTGTTGGGGCTGATTTGAAAGCCCTGGCTGACAGGGCCGGTAATATTGCCATGAAAAGGATTATACACAAGAGGAAGGCTGATATATCTATAGATACTATGGACAAAGAATGCAATGAAGAGTGGTGGATGCAACCATGGTTGCCTGAAGAAATGGAAAAGCTCACTATTACTATGGCTGATTTTGAGGAAGCAGTTGAAGTGGTTCAGCCCTCGTCCAAAAGAGAAGGGTTCTCTGCAATTCCTAATGTAAAATGGGAAGATGTTGGTGGGTTAGATCTTTTAAGGCAGGAATTTGATCGCTATATTGTTAGGCGTGTTAAATATCCTGAGAACTATGAGGAATTTGGAGTAGATTTAGAAACGGGATTTCTGCTCTATGGGCCTCCTGGATGTGGTAAAACACTGATAGCAAAGGCTGTTGCTAATGAAGCAGGAGCAAATTTCATTCACATTAAGGGCCCTGAACTTTTGAATAAATATGTTGGAGAAAGTGAATTGGCAGTTCGGACATTGTTTAGTCGCGCGAGGACATGCTCACCGTGTATACTTTTCTTTGACGAGGTGGATGCTTTAACAACAAAGCGGGGGAAAGAAGGGGGATGGGTTGTTGAGCGGCTACTGAACCAGCTACTTATAGAGTTAGATGGCGCAGAGCAGCGACGAGGTGTATTTGTAATTGGTGCCACTAATAGGTTTGGTAAACTTATTTATGTTGCCCCTCCCACAAAAGATGAAAGGGGTTTGATCTTAAAAGCTCTTGCAAGGAAGAAGCCTATTGATGAAAGTATAGATTTGAGGGAGATTGGACAAAGGGAAACATGTGAAAATTTTAGTGGAGCAGATCTTGCTGCACTGATGAATGAAGCTGCTATGGCTGCTCTTGAAGAGAAATTGACATTACCTGAGAGGAGTTCAGATGCATCTCCATGGACGATAAAAGAATCTCACTTTGACCAAGCACTGGCTAAGATGGCACCATCTGTAACTGACCAGCAAATGCAATACTACCAGAGATTTGGTGAGAGCCTCAAAGCACCAAGAAACAAAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
AAA Nucleolin_bd

Protein Analysis

815

Amino Acids

91.59

Weight (kDa)

5.81

Isoelectric Point (pI)

50.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RuvB_N PF05496 279 - 362 1.6e-06 Holliday junction DNA helicase RuvB P-loop domain
AAA PF00004 282 - 428 9.8e-41 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 452 - 487 1e-09 AAA+ lid domain
AAA PF00004 588 - 699 7.3e-37 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 727 - 763 1e-08 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 122
Acc16I TGCGCA 1 cut(s) 369
AccB1I GGYRCC 3 cut(s) 559, 2072, 2365
AccB7I CCANNNNNTGG 2 cut(s) 839, 2353
AccBSI CCGCTC 3 cut(s) 102, 630, 2005
AccI GTMKAC 3 cut(s) 449, 1379, 1936
AccII CGCG 3 cut(s) 1330, 1914, 1916
AciI CCGC 9 cut(s) 100, 160, 322, 355, 630, 791, 860, 1975, 2005
AclWI GGATC 3 cut(s) 528, 541, 691
AcoI YGGCCR 1 cut(s) 1255
AcsI RAATTY 5 cut(s) 1170, 1682, 1733, 1831, 2218
AcuI CTGAAG 3 cut(s) 693, 990, 1557
AcyI GRCGYC 2 cut(s) 462, 560
AfaI GTAC 2 cut(s) 1140, 1323
AfiI CCNNNNNNNGG 7 cut(s) 318, 839, 869, 1446, 1784, 2082, 2353
AflIII ACRYGT 1 cut(s) 2210
AjiI CACGTC 1 cut(s) 373
AjnI CCWGG 7 cut(s) 601, 1252, 1301, 1373, 1384, 1413, 1777
Alw26I GTCTC 6 cut(s) 77, 310, 356, 729, 952, 1243
AlwI GGATC 3 cut(s) 528, 541, 691
Ama87I CYCGRG 2 cut(s) 563, 863
AoxI GGCC 9 cut(s) 327, 722, 830, 856, 1220, 1255, 1425, 1772, 1849
ApaI GGGCCC 1 cut(s) 1853
ApeKI GCWGC 6 cut(s) 352, 1072, 2047, 2240, 2258, 2267
ApoI RAATTY 5 cut(s) 1170, 1682, 1733, 1831, 2218
Asp700I GAANNNNTTC 2 cut(s) 660, 1593
AspLEI GCGC 6 cut(s) 370, 545, 562, 1332, 1916, 2042
AsuC2I CCSGG 2 cut(s) 864, 865
AsuHPI GGTGA 7 cut(s) 172, 410, 718, 769, 793, 1920, 2423
AvaI CYCGRG 2 cut(s) 563, 863
AvaII GGWCC 3 cut(s) 190, 298, 568
BaeGI GKGCMC 1 cut(s) 1853
BamHI GGATCC 1 cut(s) 533
BanI GGYRCC 3 cut(s) 559, 2072, 2365
BanII GRGCYC 1 cut(s) 1853
BarI GAAGNNNNNNTAC 2 cut(s) 963, 995
BbsI GAAGAC 4 cut(s) 14, 264, 273, 285
BbvI GCAGC 6 cut(s) 364, 1084, 2059, 2227, 2245, 2254
BccI CCATC 9 cut(s) 331, 415, 769, 807, 1075, 1986, 2030, 2356, 2377
BceAI ACGGC 2 cut(s) 335, 1161
BcgI CGANNNNNNTGC 2 cut(s) 1940, 1974
BciT130I CCWGG 7 cut(s) 603, 1254, 1303, 1375, 1386, 1415, 1779
BcnI CCSGG 2 cut(s) 864, 865
BcoDI GTCTC 6 cut(s) 77, 310, 356, 729, 952, 1243
BfaI CTAG 2 cut(s) 203, 254
BfmI CTRYAG 1 cut(s) 1479
BfoI RGCGCY 2 cut(s) 546, 563
BglII AGATCT 3 cut(s) 985, 1666, 2233
BisI GCNGC 8 cut(s) 353, 791, 1073, 2006, 2048, 2241, 2259, 2268
BlsI GCNGC 8 cut(s) 354, 792, 1074, 2007, 2049, 2242, 2260, 2269
Bme1390I CCNGG 9 cut(s) 603, 864, 865, 1254, 1303, 1375, 1386, 1415, 1779
Bme18I GGWCC 3 cut(s) 190, 298, 568
BmeT110I CYCGRG 2 cut(s) 563, 863
BmgBI CACGTC 1 cut(s) 373
BmiI GGNNCC 7 cut(s) 486, 535, 561, 723, 1851, 2074, 2367
BmrFI CCNGG 9 cut(s) 603, 864, 865, 1254, 1303, 1375, 1386, 1415, 1779
BmsI GCATC 9 cut(s) 171, 530, 974, 1033, 1216, 1509, 1948, 2299, 2321
BpiI GAAGAC 4 cut(s) 14, 264, 273, 285
BpmI CTGGAG 2 cut(s) 101, 155
Bpu10I CCTNAGC 1 cut(s) 678
BpuMI CCSGG 2 cut(s) 864, 865
BsaHI GRCGYC 2 cut(s) 462, 560
BsaI GGTCTC 2 cut(s) 77, 1243
BsaWI WCCGGW 1 cut(s) 487
BsaXI ACNNNNNCTCC 6 cut(s) 86, 116, 428, 431, 458, 461
Bsc4I CCNNNNNNNGG 7 cut(s) 318, 839, 869, 1446, 1784, 2082, 2353
Bse118I RCCGGY 2 cut(s) 908, 1427
Bse1I ACTGG 2 cut(s) 172, 2358
Bse3DI GCAATG 2 cut(s) 894, 1510
BseBI CCWGG 7 cut(s) 603, 1254, 1303, 1375, 1386, 1415, 1779
BseGI GGATG 7 cut(s) 42, 799, 1126, 1524, 1787, 1963, 1997
BseLI CCNNNNNNNGG 7 cut(s) 318, 839, 869, 1446, 1784, 2082, 2353
BseMI GCAATG 2 cut(s) 894, 1510
BseMII CTCAG 2 cut(s) 1710, 2286
BseNI ACTGG 2 cut(s) 172, 2358
BseRI GAGGAG 8 cut(s) 45, 94, 97, 356, 449, 452, 779, 2314
BseSI GKGCMC 1 cut(s) 1853
BseXI GCAGC 6 cut(s) 364, 1084, 2059, 2227, 2245, 2254
BsgI GTGCAG 1 cut(s) 2226
Bsh1236I CGCG 3 cut(s) 1330, 1914, 1916
BshFI GGCC 9 cut(s) 329, 724, 832, 858, 1222, 1257, 1427, 1774, 1851
BshNI GGYRCC 3 cut(s) 559, 2072, 2365
BsiHKCI CYCGRG 2 cut(s) 563, 863
BsiSI CCGG 4 cut(s) 488, 864, 909, 1428
BslFI GGGAC 1 cut(s) 25
BslI CCNNNNNNNGG 7 cut(s) 318, 839, 869, 1446, 1784, 2082, 2353
BsmAI GTCTC 6 cut(s) 77, 310, 356, 729, 952, 1243
BsmBI CGTCTC 1 cut(s) 310
BsmFI GGGAC 1 cut(s) 25
BsmI GAATGC 2 cut(s) 912, 1505
BsnI GGCC 9 cut(s) 329, 724, 832, 858, 1222, 1257, 1427, 1774, 1851
Bso31I GGTCTC 2 cut(s) 77, 1243
BsoBI CYCGRG 2 cut(s) 563, 863
Bsp120I GGGCCC 1 cut(s) 1849
Bsp1286I GDGCHC 1 cut(s) 1853
Bsp1407I TGTACA 1 cut(s) 1138
Bsp143I GATC 8 cut(s) 533, 683, 985, 1357, 1666, 1687, 2136, 2233
Bsp19I CCATGG 3 cut(s) 394, 1526, 2318
BspACI CCGC 9 cut(s) 100, 160, 322, 355, 630, 791, 860, 1975, 2005
BspANI GGCC 9 cut(s) 329, 724, 832, 858, 1222, 1257, 1427, 1774, 1851
BspCNI CTCAG 2 cut(s) 1711, 2287
BspFNI CGCG 3 cut(s) 1330, 1914, 1916
BspLI GGNNCC 7 cut(s) 486, 535, 561, 723, 1851, 2074, 2367
BspPI GGATC 3 cut(s) 528, 541, 691
BspT107I GGYRCC 3 cut(s) 559, 2072, 2365
BspTNI GGTCTC 2 cut(s) 77, 1243
BsrBI CCGCTC 3 cut(s) 102, 630, 2005
BsrDI GCAATG 2 cut(s) 894, 1510
BsrFI RCCGGY 2 cut(s) 908, 1427
BsrGI TGTACA 1 cut(s) 1138
BsrI ACTGG 2 cut(s) 172, 2358
BssAI RCCGGY 2 cut(s) 908, 1427
BssMI GATC 8 cut(s) 533, 683, 985, 1357, 1666, 1687, 2136, 2233
BssNAI GTATAC 1 cut(s) 1937
BssNI GRCGYC 2 cut(s) 462, 560
BssT1I CCWWGG 4 cut(s) 394, 555, 1526, 2318
Bst1107I GTATAC 1 cut(s) 1937
Bst2UI CCWGG 7 cut(s) 603, 1254, 1303, 1375, 1386, 1415, 1779
Bst4CI ACNGT 4 cut(s) 404, 816, 1268, 1932
Bst6I CTCTTC 2 cut(s) 1503, 2271
BstACI GRCGYC 2 cut(s) 462, 560
BstAPI GCANNNNNTGC 1 cut(s) 2237
BstAUI TGTACA 1 cut(s) 1138
BstC8I GCNNGC 1 cut(s) 860
BstDEI CTNAG 4 cut(s) 678, 1719, 2295, 2358
BstDSI CCRYGG 3 cut(s) 394, 1526, 2318
BstEII GGTNACC 1 cut(s) 398
BstF5I GGATG 7 cut(s) 42, 799, 1126, 1524, 1787, 1963, 1997
BstFNI CGCG 3 cut(s) 1330, 1914, 1916
BstH2I RGCGCY 2 cut(s) 546, 563
BstHHI GCGC 6 cut(s) 370, 545, 562, 1332, 1916, 2042
BstKTI GATC 8 cut(s) 536, 686, 988, 1360, 1669, 1690, 2139, 2236
BstMAI GTCTC 6 cut(s) 77, 310, 356, 729, 952, 1243
BstMBI GATC 8 cut(s) 533, 683, 985, 1357, 1666, 1687, 2136, 2233
BstNI CCWGG 7 cut(s) 603, 1254, 1303, 1375, 1386, 1415, 1779
BstNSI RCATGY 2 cut(s) 1926, 2214
BstPI GGTNACC 1 cut(s) 398
BstSCI CCNGG 9 cut(s) 601, 862, 863, 1252, 1301, 1373, 1384, 1413, 1777
BstSFI CTRYAG 1 cut(s) 1479
BstSLI GKGCMC 1 cut(s) 1853
BstUI CGCG 3 cut(s) 1330, 1914, 1916
BstV1I GCAGC 6 cut(s) 364, 1084, 2059, 2227, 2245, 2254
BstV2I GAAGAC 4 cut(s) 14, 264, 273, 285
BstX2I RGATCY 4 cut(s) 533, 985, 1666, 2233
BstXI CCANNNNNNTGG 3 cut(s) 337, 395, 2408
BstYI RGATCY 4 cut(s) 533, 985, 1666, 2233
BstZ17I GTATAC 1 cut(s) 1937
BsuRI GGCC 9 cut(s) 329, 724, 832, 858, 1222, 1257, 1427, 1774, 1851
BtgI CCRYGG 3 cut(s) 394, 1526, 2318
BtrI CACGTC 1 cut(s) 373
BtsCI GGATG 7 cut(s) 42, 799, 1126, 1524, 1787, 1963, 1997
BtsIMutI CAGTG 4 cut(s) 821, 1793, 2243, 2351
Cac8I GCNNGC 1 cut(s) 860
CfoI GCGC 6 cut(s) 370, 545, 562, 1332, 1916, 2042
Cfr10I RCCGGY 2 cut(s) 908, 1427
Cfr9I CCCGGG 1 cut(s) 863
CseI GACGC 2 cut(s) 278, 470
Csp6I GTAC 2 cut(s) 1139, 1322
CviAII CATG 9 cut(s) 242, 395, 890, 1238, 1441, 1527, 1923, 2211, 2319
CviQI GTAC 2 cut(s) 1139, 1322
DdeI CTNAG 4 cut(s) 678, 1719, 2295, 2358
DinI GGCGCC 1 cut(s) 561
DpnI GATC 8 cut(s) 535, 685, 987, 1359, 1668, 1689, 2138, 2235
DpnII GATC 8 cut(s) 533, 683, 985, 1357, 1666, 1687, 2136, 2233
DrdI GACNNNNNNGTC 1 cut(s) 122
DseDI GACNNNNNNGTC 1 cut(s) 122
EaeI YGGCCR 1 cut(s) 1255
Eam1104I CTCTTC 2 cut(s) 1503, 2271
EarI CTCTTC 2 cut(s) 1503, 2271
EciI GGCGGA 1 cut(s) 337
Eco130I CCWWGG 4 cut(s) 394, 555, 1526, 2318
Eco147I AGGCCT 1 cut(s) 1222
Eco24I GRGCYC 1 cut(s) 1853
Eco31I GGTCTC 2 cut(s) 77, 1243
Eco47I GGWCC 3 cut(s) 190, 298, 568
Eco57I CTGAAG 3 cut(s) 693, 990, 1557
Eco88I CYCGRG 2 cut(s) 563, 863
Eco91I GGTNACC 1 cut(s) 398
EcoO109I RGGNCCY 2 cut(s) 1849, 1850
EcoO65I GGTNACC 1 cut(s) 398
EcoRII CCWGG 7 cut(s) 601, 1252, 1301, 1373, 1384, 1413, 1777
EcoT14I CCWWGG 4 cut(s) 394, 555, 1526, 2318
EcoT22I ATGCAT 1 cut(s) 2314
EcoT38I GRGCYC 1 cut(s) 1853
EgeI GGCGCC 1 cut(s) 561
EheI GGCGCC 1 cut(s) 561
ErhI CCWWGG 4 cut(s) 394, 555, 1526, 2318
Esp3I CGTCTC 1 cut(s) 310
FaeI CATG 9 cut(s) 245, 398, 893, 1241, 1444, 1530, 1926, 2214, 2322
FaqI GGGAC 1 cut(s) 25
FatI CATG 9 cut(s) 241, 394, 889, 1237, 1440, 1526, 1922, 2210, 2318
FauI CCCGC 2 cut(s) 867, 1968
FblI GTMKAC 3 cut(s) 449, 1379, 1936
Fnu4HI GCNGC 8 cut(s) 353, 791, 1073, 2006, 2048, 2241, 2259, 2268
FokI GGATG 7 cut(s) 49, 786, 1133, 1531, 1794, 1970, 2004
FriOI GRGCYC 1 cut(s) 1853
Fsp4HI GCNGC 8 cut(s) 353, 791, 1073, 2006, 2048, 2241, 2259, 2268
FspBI CTAG 2 cut(s) 203, 254
FspI TGCGCA 1 cut(s) 369
GlaI GCGC 6 cut(s) 369, 544, 561, 1331, 1915, 2041
GluI GCNGC 8 cut(s) 353, 791, 1073, 2006, 2048, 2241, 2259, 2268
GsuI CTGGAG 2 cut(s) 101, 155
HaeII RGCGCY 2 cut(s) 546, 563
HaeIII GGCC 9 cut(s) 329, 724, 832, 858, 1222, 1257, 1427, 1774, 1851
HapII CCGG 4 cut(s) 488, 864, 909, 1428
HgaI GACGC 2 cut(s) 278, 470
HhaI GCGC 6 cut(s) 370, 545, 562, 1332, 1916, 2042
Hin1I GRCGYC 2 cut(s) 462, 560
Hin1II CATG 9 cut(s) 245, 398, 893, 1241, 1444, 1530, 1926, 2214, 2322
Hin6I GCGC 6 cut(s) 368, 543, 560, 1330, 1914, 2040
HinP1I GCGC 6 cut(s) 368, 543, 560, 1330, 1914, 2040
HincII GTYRAC 2 cut(s) 450, 1234
HindII GTYRAC 2 cut(s) 450, 1234
HindIII AAGCTT 1 cut(s) 999
HinfI GANTC 8 cut(s) 206, 382, 668, 844, 1124, 1157, 1312, 2333
HpaII CCGG 4 cut(s) 488, 864, 909, 1428
HphI GGTGA 7 cut(s) 172, 410, 718, 769, 793, 1920, 2423
Hpy166II GTNNAC 6 cut(s) 298, 450, 1234, 1380, 1937, 2093
Hpy8I GTNNAC 6 cut(s) 298, 450, 1234, 1380, 1937, 2093
Hpy99I CGWCG 6 cut(s) 29, 119, 128, 266, 464, 2055
HpyCH4III ACNGT 4 cut(s) 404, 816, 1268, 1932
HpyCH4IV ACGT 1 cut(s) 372
HpyF3I CTNAG 4 cut(s) 678, 1719, 2295, 2358
HpySE526I ACGT 1 cut(s) 372
Hsp92I GRCGYC 2 cut(s) 462, 560
Hsp92II CATG 9 cut(s) 245, 398, 893, 1241, 1444, 1530, 1926, 2214, 2322
HspAI GCGC 6 cut(s) 368, 543, 560, 1330, 1914, 2040
KasI GGCGCC 1 cut(s) 559
Kzo9I GATC 8 cut(s) 533, 683, 985, 1357, 1666, 1687, 2136, 2233
LmnI GCTCC 6 cut(s) 107, 174, 766, 1208, 1826, 2228
Lsp1109I GCAGC 6 cut(s) 364, 1084, 2059, 2227, 2245, 2254
LweI GCATC 9 cut(s) 171, 530, 974, 1033, 1216, 1509, 1948, 2299, 2321
MaeI CTAG 2 cut(s) 203, 254
MaeII ACGT 1 cut(s) 372
MaeIII GTNAC 3 cut(s) 398, 1096, 2374
MalI GATC 8 cut(s) 535, 685, 987, 1359, 1668, 1689, 2138, 2235
MbiI CCGCTC 3 cut(s) 102, 630, 2005
MboI GATC 8 cut(s) 533, 683, 985, 1357, 1666, 1687, 2136, 2233
MfeI CAATTG 2 cut(s) 1020, 1047
MflI RGATCY 4 cut(s) 533, 985, 1666, 2233
MhlI GDGCHC 1 cut(s) 1853
Mly113I GGCGCC 1 cut(s) 560
MmeI TCCRAC 5 cut(s) 72, 561, 729, 1185, 1855
Mph1103I ATGCAT 1 cut(s) 2314
MroXI GAANNNNTTC 2 cut(s) 660, 1593
MseI TTAA 9 cut(s) 618, 1244, 1308, 1365, 1673, 1710, 1845, 1964, 2141
MslI CAYNNNNRTG 1 cut(s) 2317
MspA1I CMGCKG 1 cut(s) 355
MspI CCGG 4 cut(s) 488, 864, 909, 1428
MspR9I CCNGG 9 cut(s) 603, 864, 865, 1254, 1303, 1375, 1386, 1415, 1779
MunI CAATTG 2 cut(s) 1020, 1047
Mva1269I GAATGC 2 cut(s) 912, 1505
MvaI CCWGG 7 cut(s) 603, 1254, 1303, 1375, 1386, 1415, 1779
MvnI CGCG 3 cut(s) 1330, 1914, 1916
NarI GGCGCC 1 cut(s) 560
NciI CCSGG 2 cut(s) 864, 865
NcoI CCATGG 3 cut(s) 394, 1526, 2318
NdeII GATC 8 cut(s) 533, 683, 985, 1357, 1666, 1687, 2136, 2233
NlaIII CATG 9 cut(s) 245, 398, 893, 1241, 1444, 1530, 1926, 2214, 2322
NlaIV GGNNCC 7 cut(s) 486, 535, 561, 723, 1851, 2074, 2367
NmeAIII GCCGAG 1 cut(s) 750
NmuCI GTSAC 2 cut(s) 398, 1096
NsbI TGCGCA 1 cut(s) 369
NsiI ATGCAT 1 cut(s) 2314
NspI RCATGY 2 cut(s) 1926, 2214
PceI AGGCCT 1 cut(s) 1222
PciI ACATGT 1 cut(s) 2210
PcsI WCGNNNNNNNCGW 1 cut(s) 120
PctI GAATGC 2 cut(s) 912, 1505
PdmI GAANNNNTTC 2 cut(s) 660, 1593
PfeI GAWTC 8 cut(s) 206, 382, 668, 844, 1124, 1157, 1312, 2333
PflMI CCANNNNNTGG 2 cut(s) 839, 2353
PfoI TCCNGGA 1 cut(s) 1777
PkrI GCNGC 8 cut(s) 354, 792, 1074, 2007, 2049, 2242, 2260, 2269
PluTI GGCGCC 1 cut(s) 563
PscI ACATGT 1 cut(s) 2210
Psp6I CCWGG 7 cut(s) 601, 1252, 1301, 1373, 1384, 1413, 1777
PspEI GGTNACC 1 cut(s) 398
PspGI CCWGG 7 cut(s) 601, 1252, 1301, 1373, 1384, 1413, 1777
PspN4I GGNNCC 7 cut(s) 486, 535, 561, 723, 1851, 2074, 2367
PspOMI GGGCCC 1 cut(s) 1849
PsuI RGATCY 4 cut(s) 533, 985, 1666, 2233
RsaI GTAC 2 cut(s) 1140, 1323
RsaNI GTAC 2 cut(s) 1139, 1322
RseI CAYNNNNRTG 1 cut(s) 2317
SalI GTCGAC 1 cut(s) 448
SaqAI TTAA 9 cut(s) 618, 1244, 1308, 1365, 1673, 1710, 1845, 1964, 2141
SatI GCNGC 8 cut(s) 353, 791, 1073, 2006, 2048, 2241, 2259, 2268
Sau3AI GATC 8 cut(s) 533, 683, 985, 1357, 1666, 1687, 2136, 2233
ScrFI CCNGG 9 cut(s) 603, 864, 865, 1254, 1303, 1375, 1386, 1415, 1779
SduI GDGCHC 1 cut(s) 1853
SfaNI GCATC 9 cut(s) 171, 530, 974, 1033, 1216, 1509, 1948, 2299, 2321
SfcI CTRYAG 1 cut(s) 1479
SfoI GGCGCC 1 cut(s) 561
SinI GGWCC 3 cut(s) 190, 298, 568
SmaI CCCGGG 1 cut(s) 865
SmiMI CAYNNNNRTG 1 cut(s) 2317
SseBI AGGCCT 1 cut(s) 1222
SsiI CCGC 9 cut(s) 100, 160, 322, 355, 630, 791, 860, 1975, 2005
SspDI GGCGCC 1 cut(s) 559
SspI AATATT 1 cut(s) 1435
SspMI CTAG 2 cut(s) 203, 254
StuI AGGCCT 1 cut(s) 1222
StyD4I CCNGG 9 cut(s) 601, 862, 863, 1252, 1301, 1373, 1384, 1413, 1777
StyI CCWWGG 4 cut(s) 394, 555, 1526, 2318
TaaI ACNGT 4 cut(s) 404, 816, 1268, 1932
TaiI ACGT 1 cut(s) 375
TaqI TCGA 4 cut(s) 24, 114, 449, 509
TatI WGTACW 2 cut(s) 1138, 1321
TauI GCSGC 2 cut(s) 793, 2008
TfiI GAWTC 8 cut(s) 206, 382, 668, 844, 1124, 1157, 1312, 2333
Tru1I TTAA 9 cut(s) 618, 1244, 1308, 1365, 1673, 1710, 1845, 1964, 2141
Tru9I TTAA 9 cut(s) 618, 1244, 1308, 1365, 1673, 1710, 1845, 1964, 2141
TscAI CASTG 4 cut(s) 821, 1800, 2250, 2358
TseFI GTSAC 2 cut(s) 398, 1096
TseI GCWGC 6 cut(s) 352, 1072, 2047, 2240, 2258, 2267
Tsp45I GTSAC 2 cut(s) 398, 1096
TspGWI ACGGA 3 cut(s) 42, 59, 651
TspMI CCCGGG 1 cut(s) 863
TspRI CASTG 4 cut(s) 821, 1800, 2250, 2358
Van91I CCANNNNNTGG 2 cut(s) 839, 2353
VpaK11BI GGWCC 3 cut(s) 190, 298, 568
XapI RAATTY 5 cut(s) 1170, 1682, 1733, 1831, 2218
XceI RCATGY 2 cut(s) 1926, 2214
XmaI CCCGGG 1 cut(s) 863
XmiI GTMKAC 3 cut(s) 449, 1379, 1936
XmnI GAANNNNTTC 2 cut(s) 660, 1593
XspI CTAG 2 cut(s) 203, 254
Zsp2I ATGCAT 1 cut(s) 2314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.