Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0007658

Physical Location & Seq

Genomic Coordinates Forward (+)

14344965 .. 14351077

Gene Structure 6113 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G135900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2589 bp

ATGGCAACTCCTGGGCAGCGAGGAAAGATGGTGAAGAGGGTTAAGAGGGTGAGGAATCCTGCGTCGCCAGCACCTAGGTTAGAGGGGGGAGGGAGGTCGCTCTCCGATCAAAAGCAGAGGGTTCTTCGTTGTCGTTTGGAGACCTTCAAGCACCTGCGATCCTCCTCTCTAGACGAAATCGTCCACCAACTTCGCAATAATTACCGAGACTACCACCGCCTCAAGCTTCAGTCTTTCAACAAGTTCGTCCAGCAAACCCTAGACTCGCCTTCCTTTAAGCAATCGAAAACCCTAATCCATGTCAGTGACTTAGAAGAAGAAGAAGAAGAAGAAGAAAAAGACGAAGAAGAAGACGGCCAAAGCAATTCCCAGAGAAGGCAGAAGCGTGCTGCCAGTAAGAGCGAGGATAAATTGCAGCGAATGGAGTCTGCCCACCTCAGAAGGATTCGTGAAAGGAATGGTGACCGTCCATCTACATCTTCTTCTTCTTCGTCTTCTTCTTCTTCGTCTTCTTCGTCTTCTTCTTCTGATGATGCTGATGAAGATGGGTCTCTGTCGATGTCGGAGGACGCAATATACAGCAAGAAAGTGGAGCCGGAGTTTGATGTGATGAAATCGAGTCTCCGAGCATCGTATATGGAGTCGAACAGCGCCATGAAGCCCAAGGCAGCCGAGGATCAGAAGGAGAAGAATGTAGAAATGGAGCTTCCTGGTCGCGAAGAAGTTGAGTTAATGGGCGGCAATGGAGTGCTAAGGCGGCCAAAGACATTGCAAGCAGCTGAAGCCAAAGGCTCGGTTACAGGGGTTGAGGTGAAGGGAAGTGAGGGGCCGAGGTTTGGTGACTTAGGTGGGATGGAGAAGGTGATAGAGGAGCTGAAGATGGAGGTGATTGTGCCGCTTCGCCATCCGGAGCTGCCTCGGTGGCTTGGAGTTAGGCCAATGTCTGGGATTTTGTTGTATGGCCCGCCCGGGTGTGGCAAGACCAAATTGGCTCATGCCATTGCCAATGAAACCGGCATTCCCTTTTATAAAATTTCTGCCACTGAAATTGTCTCTGGTGTCTCAGGTGCATCTGAAGAAAATATAAGAGAGCTTTTTTCTAAAGCATATAGAACTGCCCCTTCAATTGTATTTATTGATGAAATTGATGCAATTGCTTCGAAAAGAGAAAGTTTGCAACGAGAAATGGAGAGGCGAATTGTGACACAACTAATGACTTGCATGGATGAATCTCATAGGCTTGTACAACCGGCTGATGCAAATTCGGATTCGCAAAGTTCCGATAACAAGTCTGGCTATGTTCTTGTTATTGGAGCTACCAATAGGCCTGATGCTGTTGACCATGCTCTGAGAAGGCCAGGGAGGTTTGACCGTGAGATTGTTTTAGGTGTTCCAGATGAAAATGCGAGGTTTCAGATTCTTTCTGTGCTTACACGCAATCTGAGACTTGAAGGTTCTTTTGATCTTCTTAAAATAGCCAGGTCTACACCAGGGTTTGTGGGGGCTGATTTGGCAGCCCTGGCTGACAGGGCTGGTAACATTGCCATGAAAAGGATAATACACAAGAGGAAGACTTATATGTCCAAATATTCTATGAATGAGGAGTGCAATGAAGATTGGTGGAGGCAACCATGGACGCCTGAAGAAATGGAAAAGCTTACTATCAGTATGGCTGATTTTGAGGAAGCAGTTCAAGTGGTTCAGCCTTCATCAAAAAGAGAAGGCTTCTCTGCAATTCCTAATGTAAAATGGGACGATGTTGGTGGGTTAGATCTTTTAAGACAGGAATTTGATCGTTATATAGTTAGGCGTGTTAAATATCCTGAGAACTATGAGGAATTTGGAGTAGATTTAGAGACAGGATTTTTGCTCTATGGGCCTCCAGGATGTGGTAAAACACTGATAGCGAAGGCCATTGCTAATGAAGCGGGAGCCAATTTCATTCACATTAAGGGCCCTGAACTTCTGAATAAATATGTTGGAGAAAGTGAGTTGGCAGTTAGGACATTGTTTAGTCGCGCAAGGACATGCTCACCATGCATACTTTTCTTTGATGAGGTGGATGCTTTAACAACTAAGCGGGGGAAAGAAGGAGGATGGGTTGTTGAACGGCTATTGAACCAGTTACTTATAGAGTTAGATGGTGCTGAGCAGCGGCGGGGTGTATTTGTTATTGGTGCCACTAATAGACCCGATGTCATGGACCGTGCTGTTTTGCGGCCCGGAAGGTTTGGTAAACTTATCTATGTCGCCCCACCCACTAAAGACGAGCGTGGTTTAATATTAAAAGCTCTTGCAAGGAAGAAGCCTATAGATGCCAGCGTAGATCTGAGTGAGATTGGACAAAGGGGAACTTGTGAAAATTTTAGTGGAGCTGATCTTGCTGCACTGATGAATGAAGCTGCTATGGCTGCTCTTGAAGAGAAACTGACATCACCTGAGAGGAGTTTAGATGCATCTCCATGGACTATCAACGACACTCACTTTGAGCAAGCATTGGCTAAAATTGCACCATCTGTAACAGACACGCAAATGCAGTACTACCAGAAATTTGGGGAGAGCCTCAAAGCACCAAGAAACAAAGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

AAA Nucleolin_bd

Protein Analysis

863

Amino Acids

96.26

Weight (kDa)

6.42

Isoelectric Point (pI)

57.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007658)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37910
fragaria_vesca	FvH4_2g31390 FvH4_2g31390 FvH4_2g31390
malus_domestica	MD09G1249100.v1.1 MD17G1241700.v1.1
prunus_persica	Prupe.3G135900_v2.0.a1 Prupe.3G135900_v2.0.a1 Prupe.3G135900_v2.0.a1 Prupe.4G275000_v2.0.a1
pyrus_communis	pycom09g16600 pycom17g24480
rosa_chinensis	RchiOBHm_Chr6g0311431
rosa_laevigata	RLG00000010407
rosa_multiflora	Rmu_sc0006915.1_g000008 Rmu_sc0013619.1_g000001 Rmu_sc0015790.1_g000001 Rmu_sc0037156.1_g000001
rosa_roxburghii	Rroxscaffold_7G00157620
rosa_rugosa	Rorug06G0389000
rosa_samantha	Rh6AG503300 Rh6BG513900 Rh6DG505900
rosa_wichuraiana	Rw6G043830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1029
AarI	CACCTGC	1 cut(s)	162
AasI	GACNNNNNNGTC	2 cut(s)	179, 1579
Acc36I	ACCTGC	1 cut(s)	162
AccB1I	GGYRCC	1 cut(s)	2177
AccB7I	CCANNNNNTGG	2 cut(s)	944, 1889
AccI	GTMKAC	1 cut(s)	1484
AccII	CGCG	2 cut(s)	717, 2019
AccIII	TCCGGA	1 cut(s)	907
AclWI	GGATC	2 cut(s)	153, 684
AcoI	YGGCCR	2 cut(s)	355, 758
AcsI	RAATTY	6 cut(s)	1032, 1261, 1787, 1838, 2362, 2549
AcuI	CTGAAG	5 cut(s)	212, 801, 896, 1095, 1662
AcyI	GRCGYC	1 cut(s)	1637
AfaI	GTAC	2 cut(s)	1245, 2540
AfiI	CCNNNNNNNGG	6 cut(s)	375, 836, 944, 974, 1551, 1889
AgsI	TTSAA	8 cut(s)	148, 238, 1125, 1451, 1694, 2108, 2119, 2420
AhdI	GACNNNNNGTC	1 cut(s)	2195
AjnI	CCWGG	7 cut(s)	10, 709, 1357, 1478, 1489, 1518, 1882
Alw26I	GTCTC	8 cut(s)	134, 201, 555, 626, 1057, 1066, 1438, 1850
AlwI	GGATC	2 cut(s)	153, 684
Ama87I	CYCGRG	1 cut(s)	968
Aor13HI	TCCGGA	1 cut(s)	907
ApaI	GGGCCC	1 cut(s)	1958
ApoI	RAATTY	6 cut(s)	1032, 1261, 1787, 1838, 2362, 2549
ArsI	GACNNNNNNTTYG	4 cut(s)	1849, 1881, 2468, 2500
Asp700I	GAANNNNTTC	1 cut(s)	1689
AspA2I	CCTAGG	1 cut(s)	74
AspLEI	GCGC	2 cut(s)	653, 2021
AspS9I	GGNCC	7 cut(s)	827, 962, 1877, 1954, 1955, 2203, 2220
AsuC2I	CCSGG	3 cut(s)	969, 970, 2223
AsuHPI	GGTGA	9 cut(s)	43, 61, 473, 823, 851, 874, 898, 2025, 2427
AsuII	TTCGAA	1 cut(s)	1160
AvaI	CYCGRG	1 cut(s)	968
AvaII	GGWCC	1 cut(s)	2203
AvrII	CCTAGG	1 cut(s)	74
BaeGI	GKGCMC	1 cut(s)	1958
BanI	GGYRCC	1 cut(s)	2177
BanII	GRGCYC	1 cut(s)	1958
BbsI	GAAGAC	5 cut(s)	357, 486, 501, 510, 1577
BccI	CCATC	9 cut(s)	22, 478, 539, 847, 874, 912, 2091, 2135, 2521
BceAI	ACGGC	2 cut(s)	370, 2126
BcgI	CGANNNNNNTGC	2 cut(s)	1140, 1174
BciT130I	CCWGG	7 cut(s)	12, 711, 1359, 1480, 1491, 1520, 1884
BcnI	CCSGG	3 cut(s)	969, 970, 2223
BcoDI	GTCTC	8 cut(s)	134, 201, 555, 626, 1057, 1066, 1438, 1850
BfaI	CTAG	3 cut(s)	75, 170, 260
BfmI	CTRYAG	1 cut(s)	2310
BfoI	RGCGCY	1 cut(s)	654
BfuAI	ACCTGC	1 cut(s)	162
BglI	GCCNNNNNGGC	1 cut(s)	922
BglII	AGATCT	2 cut(s)	1771, 2326
BlnI	CCTAGG	1 cut(s)	74
BlpI	GCTNAGC	1 cut(s)	2148
BmcAI	AGTACT	1 cut(s)	2540
Bme18I	GGWCC	1 cut(s)	2203
BmeRI	GACNNNNNGTC	1 cut(s)	2195
BmeT110I	CYCGRG	1 cut(s)	968
BmgT120I	GGNCC	7 cut(s)	827, 962, 1877, 1954, 1955, 2203, 2220
BmiI	GGNNCC	5 cut(s)	594, 828, 1933, 1956, 2179
BpiI	GAAGAC	5 cut(s)	357, 486, 501, 510, 1577
BpmI	CTGGAG	1 cut(s)	1866
Bpu10I	CCTNAGC	1 cut(s)	752
Bpu1102I	GCTNAGC	1 cut(s)	2148
Bpu14I	TTCGAA	1 cut(s)	1160
BpuEI	CTTGAG	1 cut(s)	206
BpuMI	CCSGG	3 cut(s)	969, 970, 2223
BsaHI	GRCGYC	1 cut(s)	1637
BsaI	GGTCTC	2 cut(s)	134, 555
BsaWI	WCCGGW	1 cut(s)	907
BsaXI	ACNNNNNCTCC	4 cut(s)	584, 614, 2085, 2115
Bsc4I	CCNNNNNNNGG	6 cut(s)	375, 836, 944, 974, 1551, 1889
Bse118I	RCCGGY	2 cut(s)	1013, 1249
Bse1I	ACTGG	2 cut(s)	393, 2122
Bse3DI	GCAATG	6 cut(s)	748, 767, 999, 1539, 1615, 1914
BseAI	TCCGGA	1 cut(s)	907
BseBI	CCWGG	7 cut(s)	12, 711, 1359, 1480, 1491, 1520, 1884
BseGI	GGATG	6 cut(s)	858, 904, 1231, 1892, 2068, 2102
BseLI	CCNNNNNNNGG	6 cut(s)	375, 836, 944, 974, 1551, 1889
BseMI	GCAATG	6 cut(s)	748, 767, 999, 1539, 1615, 1914
BseMII	CTCAG	8 cut(s)	451, 1077, 1340, 1433, 1815, 2139, 2321, 2430
BseNI	ACTGG	2 cut(s)	393, 2122
BseRI	GAGGAG	4 cut(s)	154, 884, 1616, 2458
BseSI	GKGCMC	1 cut(s)	1958
BsgI	GTGCAG	1 cut(s)	2370
Bsh1236I	CGCG	2 cut(s)	717, 2019
BshNI	GGYRCC	1 cut(s)	2177
BsiHKCI	CYCGRG	1 cut(s)	968
BsiSI	CCGG	6 cut(s)	596, 908, 969, 1014, 1250, 2223
BslFI	GGGAC	1 cut(s)	1766
BslI	CCNNNNNNNGG	6 cut(s)	375, 836, 944, 974, 1551, 1889
BsmAI	GTCTC	8 cut(s)	134, 201, 555, 626, 1057, 1066, 1438, 1850
BsmFI	GGGAC	1 cut(s)	1766
BsmI	GAATGC	1 cut(s)	1017
Bso31I	GGTCTC	2 cut(s)	134, 555
BsoBI	CYCGRG	1 cut(s)	968
Bsp119I	TTCGAA	1 cut(s)	1160
Bsp120I	GGGCCC	1 cut(s)	1954
Bsp1286I	GDGCHC	1 cut(s)	1958
Bsp13I	TCCGGA	1 cut(s)	907
Bsp1407I	TGTACA	1 cut(s)	1243
Bsp143I	GATC	8 cut(s)	106, 158, 676, 1462, 1771, 1792, 2326, 2377
Bsp1720I	GCTNAGC	1 cut(s)	2148
Bsp19I	CCATGG	2 cut(s)	1631, 2462
Bsp68I	TCGCGA	1 cut(s)	717
BspCNI	CTCAG	8 cut(s)	450, 1076, 1341, 1434, 1816, 2140, 2322, 2431
BspEI	TCCGGA	1 cut(s)	907
BspFNI	CGCG	2 cut(s)	717, 2019
BspLI	GGNNCC	5 cut(s)	594, 828, 1933, 1956, 2179
BspMI	ACCTGC	1 cut(s)	162
BspPI	GGATC	2 cut(s)	153, 684
BspT104I	TTCGAA	1 cut(s)	1160
BspT107I	GGYRCC	1 cut(s)	2177
BspTNI	GGTCTC	2 cut(s)	134, 555
BsrDI	GCAATG	6 cut(s)	748, 767, 999, 1539, 1615, 1914
BsrFI	RCCGGY	2 cut(s)	1013, 1249
BsrGI	TGTACA	1 cut(s)	1243
BsrI	ACTGG	2 cut(s)	393, 2122
BssAI	RCCGGY	2 cut(s)	1013, 1249
BssMI	GATC	8 cut(s)	106, 158, 676, 1462, 1771, 1792, 2326, 2377
BssNI	GRCGYC	1 cut(s)	1637
BssT1I	CCWWGG	4 cut(s)	74, 663, 1631, 2462
Bst2UI	CCWGG	7 cut(s)	12, 711, 1359, 1480, 1491, 1520, 1884
Bst4CI	ACNGT	3 cut(s)	467, 1373, 2207
Bst6I	CTCTTC	2 cut(s)	29, 2415
BstACI	GRCGYC	1 cut(s)	1637
BstAUI	TGTACA	1 cut(s)	1243
BstBI	TTCGAA	1 cut(s)	1160
BstC8I	GCNNGC	6 cut(s)	69, 387, 774, 965, 2320, 2493
BstDSI	CCRYGG	2 cut(s)	1631, 2462
BstEII	GGTNACC	1 cut(s)	461
BstF5I	GGATG	6 cut(s)	858, 904, 1231, 1892, 2068, 2102
BstFNI	CGCG	2 cut(s)	717, 2019
BstH2I	RGCGCY	1 cut(s)	654
BstHHI	GCGC	2 cut(s)	653, 2021
BstKTI	GATC	8 cut(s)	109, 161, 679, 1465, 1774, 1795, 2329, 2380
BstMAI	GTCTC	8 cut(s)	134, 201, 555, 626, 1057, 1066, 1438, 1850
BstMBI	GATC	8 cut(s)	106, 158, 676, 1462, 1771, 1792, 2326, 2377
BstNI	CCWGG	7 cut(s)	12, 711, 1359, 1480, 1491, 1520, 1884
BstNSI	RCATGY	1 cut(s)	2031
BstPI	GGTNACC	1 cut(s)	461
BstSFI	CTRYAG	1 cut(s)	2310
BstSLI	GKGCMC	1 cut(s)	1958
BstUI	CGCG	2 cut(s)	717, 2019
BstV2I	GAAGAC	5 cut(s)	357, 486, 501, 510, 1577
BstX2I	RGATCY	2 cut(s)	1771, 2326
BstXI	CCANNNNNNTGG	1 cut(s)	2552
BstYI	RGATCY	2 cut(s)	1771, 2326
BtgI	CCRYGG	2 cut(s)	1631, 2462
BtsCI	GGATG	6 cut(s)	858, 904, 1231, 1892, 2068, 2102
BtsIMutI	CAGTG	4 cut(s)	310, 1041, 1898, 2387
BtuMI	TCGCGA	1 cut(s)	717
BveI	ACCTGC	1 cut(s)	162
Cac8I	GCNNGC	6 cut(s)	69, 387, 774, 965, 2320, 2493
CfoI	GCGC	2 cut(s)	653, 2021
Cfr10I	RCCGGY	2 cut(s)	1013, 1249
Cfr13I	GGNCC	7 cut(s)	827, 962, 1877, 1954, 1955, 2203, 2220
Cfr9I	CCCGGG	1 cut(s)	968
CseI	GACGC	3 cut(s)	51, 578, 1645
Csp6I	GTAC	2 cut(s)	1244, 2539
CspCI	CAANNNNNGTGG	2 cut(s)	1030, 1065
CviQI	GTAC	2 cut(s)	1244, 2539
DpnI	GATC	8 cut(s)	108, 160, 678, 1464, 1773, 1794, 2328, 2379
DpnII	GATC	8 cut(s)	106, 158, 676, 1462, 1771, 1792, 2326, 2377
DrdI	GACNNNNNNGTC	2 cut(s)	179, 1579
DriI	GACNNNNNGTC	1 cut(s)	2195
DseDI	GACNNNNNNGTC	2 cut(s)	179, 1579
EaeI	YGGCCR	2 cut(s)	355, 758
Eam1104I	CTCTTC	2 cut(s)	29, 2415
Eam1105I	GACNNNNNGTC	1 cut(s)	2195
EarI	CTCTTC	2 cut(s)	29, 2415
Eco130I	CCWWGG	4 cut(s)	74, 663, 1631, 2462
Eco147I	AGGCCT	1 cut(s)	1327
Eco24I	GRGCYC	1 cut(s)	1958
Eco31I	GGTCTC	2 cut(s)	134, 555
Eco47I	GGWCC	1 cut(s)	2203
Eco57I	CTGAAG	5 cut(s)	212, 801, 896, 1095, 1662
Eco88I	CYCGRG	1 cut(s)	968
Eco91I	GGTNACC	1 cut(s)	461
EcoO109I	RGGNCCY	2 cut(s)	1954, 1955
EcoO65I	GGTNACC	1 cut(s)	461
EcoRII	CCWGG	7 cut(s)	10, 709, 1357, 1478, 1489, 1518, 1882
EcoT14I	CCWWGG	4 cut(s)	74, 663, 1631, 2462
EcoT22I	ATGCAT	2 cut(s)	2042, 2458
EcoT38I	GRGCYC	1 cut(s)	1958
ErhI	CCWWGG	4 cut(s)	74, 663, 1631, 2462
FalI	AAGNNNNNCTT	2 cut(s)	2338, 2370
FaqI	GGGAC	1 cut(s)	1766
FauI	CCCGC	4 cut(s)	972, 1921, 2073, 2151
FblI	GTMKAC	1 cut(s)	1484
FokI	GGATG	6 cut(s)	865, 891, 1238, 1899, 2075, 2109
FriOI	GRGCYC	1 cut(s)	1958
FspBI	CTAG	3 cut(s)	75, 170, 260
GlaI	GCGC	2 cut(s)	652, 2020
GsuI	CTGGAG	1 cut(s)	1866
HaeII	RGCGCY	1 cut(s)	654
HapII	CCGG	6 cut(s)	596, 908, 969, 1014, 1250, 2223
HgaI	GACGC	3 cut(s)	51, 578, 1645
HhaI	GCGC	2 cut(s)	653, 2021
Hin1I	GRCGYC	1 cut(s)	1637
Hin6I	GCGC	2 cut(s)	651, 2019
HinP1I	GCGC	2 cut(s)	651, 2019
HincII	GTYRAC	1 cut(s)	1339
HindII	GTYRAC	1 cut(s)	1339
HindIII	AAGCTT	2 cut(s)	224, 1655
HinfI	GANTC	9 cut(s)	55, 263, 425, 445, 619, 641, 1229, 1268, 1417
HpaII	CCGG	6 cut(s)	596, 908, 969, 1014, 1250, 2223
HphI	GGTGA	9 cut(s)	43, 61, 473, 823, 851, 874, 898, 2025, 2427
Hpy166II	GTNNAC	4 cut(s)	184, 1339, 1485, 2237
Hpy188III	TCNNGA	7 cut(s)	170, 449, 716, 908, 1394, 1823, 2417
Hpy8I	GTNNAC	4 cut(s)	184, 1339, 1485, 2237
Hpy99I	CGWCG	1 cut(s)	67
HpyCH4III	ACNGT	3 cut(s)	467, 1373, 2207
Hsp92I	GRCGYC	1 cut(s)	1637
HspAI	GCGC	2 cut(s)	651, 2019
Kpn2I	TCCGGA	1 cut(s)	907
Kzo9I	GATC	8 cut(s)	106, 158, 676, 1462, 1771, 1792, 2326, 2377
LmnI	GCTCC	7 cut(s)	592, 703, 871, 910, 1313, 1931, 2372
MaeI	CTAG	3 cut(s)	75, 170, 260
MaeIII	GTNAC	8 cut(s)	305, 461, 796, 839, 1201, 1535, 2124, 2518
MalI	GATC	8 cut(s)	108, 160, 678, 1464, 1773, 1794, 2328, 2379
MboI	GATC	8 cut(s)	106, 158, 676, 1462, 1771, 1792, 2326, 2377
MfeI	CAATTG	2 cut(s)	1125, 1152
MflI	RGATCY	2 cut(s)	1771, 2326
MhlI	GDGCHC	1 cut(s)	1958
MlyI	GAGTC	4 cut(s)	257, 434, 628, 650
MmeI	TCCRAC	2 cut(s)	543, 1960
Mph1103I	ATGCAT	2 cut(s)	2042, 2458
MroI	TCCGGA	1 cut(s)	907
MroXI	GAANNNNTTC	1 cut(s)	1689
MslI	CAYNNNNRTG	4 cut(s)	303, 1544, 2461, 2531
MspA1I	CMGCKG	2 cut(s)	779, 2155
MspI	CCGG	6 cut(s)	596, 908, 969, 1014, 1250, 2223
MunI	CAATTG	2 cut(s)	1125, 1152
Mva1269I	GAATGC	1 cut(s)	1017
MvaI	CCWGG	7 cut(s)	12, 711, 1359, 1480, 1491, 1520, 1884
MvnI	CGCG	2 cut(s)	717, 2019
NciI	CCSGG	3 cut(s)	969, 970, 2223
NcoI	CCATGG	2 cut(s)	1631, 2462
NdeII	GATC	8 cut(s)	106, 158, 676, 1462, 1771, 1792, 2326, 2377
NlaIV	GGNNCC	5 cut(s)	594, 828, 1933, 1956, 2179
NmeAIII	GCCGAG	2 cut(s)	697, 855
NmuCI	GTSAC	4 cut(s)	305, 461, 839, 1201
NruI	TCGCGA	1 cut(s)	717
NsiI	ATGCAT	2 cut(s)	2042, 2458
NspI	RCATGY	1 cut(s)	2031
NspV	TTCGAA	1 cut(s)	1160
PaqCI	CACCTGC	1 cut(s)	162
PceI	AGGCCT	1 cut(s)	1327
PcsI	WCGNNNNNNNCGW	1 cut(s)	512
PctI	GAATGC	1 cut(s)	1017
PdmI	GAANNNNTTC	1 cut(s)	1689
PfeI	GAWTC	5 cut(s)	55, 445, 1229, 1268, 1417
PflMI	CCANNNNNTGG	2 cut(s)	944, 1889
PfoI	TCCNGGA	1 cut(s)	1882
PleI	GAGTC	4 cut(s)	257, 433, 627, 649
PpsI	GAGTC	4 cut(s)	257, 433, 627, 649
PsiI	TTATAA	1 cut(s)	1029
Psp6I	CCWGG	7 cut(s)	10, 709, 1357, 1478, 1489, 1518, 1882
PspEI	GGTNACC	1 cut(s)	461
PspGI	CCWGG	7 cut(s)	10, 709, 1357, 1478, 1489, 1518, 1882
PspN4I	GGNNCC	5 cut(s)	594, 828, 1933, 1956, 2179
PspOMI	GGGCCC	1 cut(s)	1954
PspPI	GGNCC	7 cut(s)	827, 962, 1877, 1954, 1955, 2203, 2220
PsuI	RGATCY	2 cut(s)	1771, 2326
PvuII	CAGCTG	1 cut(s)	779
RruI	TCGCGA	1 cut(s)	717
RsaI	GTAC	2 cut(s)	1245, 2540
RsaNI	GTAC	2 cut(s)	1244, 2539
RseI	CAYNNNNRTG	4 cut(s)	303, 1544, 2461, 2531
Sau3AI	GATC	8 cut(s)	106, 158, 676, 1462, 1771, 1792, 2326, 2377
Sau96I	GGNCC	7 cut(s)	827, 962, 1877, 1954, 1955, 2203, 2220
ScaI	AGTACT	1 cut(s)	2540
SchI	GAGTC	4 cut(s)	257, 434, 628, 650
SduI	GDGCHC	1 cut(s)	1958
SfcI	CTRYAG	1 cut(s)	2310
SfuI	TTCGAA	1 cut(s)	1160
SinI	GGWCC	1 cut(s)	2203
SmaI	CCCGGG	1 cut(s)	970
SmiMI	CAYNNNNRTG	4 cut(s)	303, 1544, 2461, 2531
SmlI	CTYRAG	1 cut(s)	221
SmoI	CTYRAG	1 cut(s)	221
SseBI	AGGCCT	1 cut(s)	1327
SspI	AATATT	2 cut(s)	1589, 2283
SspMI	CTAG	3 cut(s)	75, 170, 260
StuI	AGGCCT	1 cut(s)	1327
StyI	CCWWGG	4 cut(s)	74, 663, 1631, 2462
TaaI	ACNGT	3 cut(s)	467, 1373, 2207
TaqI	TCGA	5 cut(s)	284, 557, 617, 644, 1160
TatI	WGTACW	2 cut(s)	1243, 2538
TauI	GCSGC	5 cut(s)	741, 760, 898, 2158, 2221
TfiI	GAWTC	5 cut(s)	55, 445, 1229, 1268, 1417
TscAI	CASTG	4 cut(s)	310, 1048, 1905, 2394
TseFI	GTSAC	4 cut(s)	305, 461, 839, 1201
Tsp45I	GTSAC	4 cut(s)	305, 461, 839, 1201
TspMI	CCCGGG	1 cut(s)	968
TspRI	CASTG	4 cut(s)	310, 1048, 1905, 2394
Van91I	CCANNNNNTGG	2 cut(s)	944, 1889
VpaK11BI	GGWCC	1 cut(s)	2203
XapI	RAATTY	6 cut(s)	1032, 1261, 1787, 1838, 2362, 2549
XbaI	TCTAGA	1 cut(s)	169
XceI	RCATGY	1 cut(s)	2031
XmaI	CCCGGG	1 cut(s)	968
XmaJI	CCTAGG	1 cut(s)	74
XmiI	GTMKAC	1 cut(s)	1484
XmnI	GAANNNNTTC	1 cut(s)	1689
XspI	CTAG	3 cut(s)	75, 170, 260
ZrmI	AGTACT	1 cut(s)	2540
Zsp2I	ATGCAT	2 cut(s)	2042, 2458

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.