Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0005162

Physical Location & Seq

Genomic Coordinates Reverse (-)

10859723 .. 10867673

Gene Structure 7951 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1076200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGGCGGAGGAGGCAATTTTAGGATACCTGGAGTCAAAGGATGAAATATCAGATTCCGGTCAGTTTGCAAGTGAACGTGGACTCGATCACAACGAGGTTGTCAACGTTATCAAGAGCCTCCATGGTTTCAGATACGTTGTTGCACAGGACATCAAAAGAGAGATGTGGATGCTTACGGATGAAGGAAATGCATACACTGTTACCGGGTCACCGGAAGTGCAGCTGTTCCTGGCCATACCACCTGAGGGTATCCCCAAAGAAGAGTTGCAGAAAAAGCTGGACCCATCAGTTTTCAAAATAGGTAGCGCTCAGGCTGCAAAGAGAAAATGGGTGGAAATGGGCAAGCAACTAGTAACCCGAAAGATCCAACATGTGGAGGACGAAGTAAAAAGTTTGCTTCTACAGATACAAGATGGGCAGGCCATCAACCAAGATGAAATTAAAGCTCTCAAAGCAAGAAAGCTTATTGTTCCACAAACGTGGAAGGGCTACTCAGTTAAAAAGGGCTCCAATTATGCTCCAAAGAGAAAGAAAGTAGCTACAGATTTGACTCGAGAGAATCTTCAAAGGGGTGATTGGAAGGAACTAGAGTTCAAAGAGTATAACTTCAGCGCTAAAGGTCTGCCTATTGAAAGTGGTCATCTTCATCCACTGCTCAAGGCAAGGACATATTTCCACCATATTTTTTTAATAGAAGTGGCTTTTTTGAGTAATATAAAACTGGTACGACATCAGTTGAAGGGTATTTTCAGGCAGATGGGGTTTGAGGAGATGCCTACAAACAATTATGTTGAGAGCAGCTTCTGGAACTTTGATGCGCTTTTCCAGCCACAGCAACACCCTGCTCGTGATTCGCATGATACATTTTTCCTACAAGTTCCTTCAACCACCAAGCAACTGCCCGAAGATTACGTTGAGCGGGTGAAGCAGATTCATGAGTCTGGTGGTTATCAATCCCGAGGATATGGATATGATTGGAAAAGAGAGGAAGCAGACAAAAATCTTTTGCGAACTCACACAACCGCTGTTTCCTCCAGGATGCTGTACGCACTAGCTCAGAAACCATTTGTGCCCAAAAAGTACTACTCTATAGATCGTGTATTCAGAAATGAAGCAGTAGATCGAACACATCTTGCAGAGTTCCACCAGATAGAAGGTTTGGTATGTGATCGAGGGCTTGCTCTTGGTGACTTGTTAGGAGTACTCAAAGAATTCTTCTCACGTCTGGGCATGTCGAAACTGCGTTTCAAGCCGGCTTATAACCCATATACTGAGCCTAGCATGGAGATTTTCAGTTATCATGAAGGCCTGGGGAAATGGGTAGAGATTGGAAATTCAGGCATGTTTAGACCTGAAATGCTGCTTCCTATGGGACTCCCAGAAGATGTTCGTGTTATTGCATGGGGCCTCTCCCTCGAAAGACCGACCATGATTCTCTATGGGATTGATAACATCAGGGATCTTTTCGGACACAAGGTGGATCTTGGTCTCATCAAGAAGAACTCGATCTGTCGCCTTGGATTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004826 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006432 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009328 GO:0009987 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0032991 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2d

Protein Analysis

509

Amino Acids

58.43

Weight (kDa)

8.63

Isoelectric Point (pI)

40.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PheRS_DBD1	PF18552	3 - 53	4e-09	PheRS DNA binding domain 1
PheRS_DBD3	PF18553	70 - 125	6.1e-14	PheRS DNA binding domain 3
tRNA-synt_2d	PF01409	239 - 495	6e-86	tRNA synthetases class II core domain (F)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39280 AT4G39280
fragaria_vesca	FvH4_2g08790 FvH4_2g08790 FvH4_3g28200 FvH4_3g28200
malus_domestica	MD05G1066200.v1.1 MD10G1076200.v1.1
prunus_persica	Prupe.8G096800_v2.0.a1 Prupe.8G096800_v2.0.a1 Prupe.8G096800_v2.0.a1
pyrus_communis	pycom10g05960
rosa_chinensis	RchiOBHm_Chr6g0264251 RchiOBHm_Chr7g0204471
rosa_laevigata	RLG00000003457 RLG00000014275
rosa_multiflora	Rmu_co8442849.1_g000001 Rmu_sc0010483.1_g000023
rosa_roxburghii	Rroxscaffold_176G00431660 Rroxscaffold_3G00253060
rosa_rugosa	Rorug06G0011500 Rorug07G0084400
rosa_samantha	Rh6AG130900 Rh6BG128000 Rh6CG126400 Rh6DG113500 Rh7AG213800 Rh7CG226600 Rh7DG221200
rosa_wichuraiana	Rw6G011440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1260, 1525
AccB7I	CCANNNNNTGG	1 cut(s)	373
AccBSI	CCGCTC	1 cut(s)	919
AciI	CCGC	3 cut(s)	5, 919, 1023
AclI	AACGTT	1 cut(s)	105
AclWI	GGATC	3 cut(s)	358, 1467, 1488
AcoI	YGGCCR	1 cut(s)	231
AcsI	RAATTY	2 cut(s)	1211, 1333
AcuI	CTGAAG	1 cut(s)	592
AdeI	CACNNNGTG	1 cut(s)	1477
AfaI	GTAC	4 cut(s)	726, 1046, 1082, 1203
AfeI	AGCGCT	2 cut(s)	307, 613
AfiI	CCNNNNNNNGG	2 cut(s)	245, 373
AflIII	ACRYGT	1 cut(s)	370
AgsI	TTSAA	7 cut(s)	295, 566, 595, 632, 739, 885, 1249
AhlI	ACTAGT	1 cut(s)	349
AjiI	CACGTC	1 cut(s)	1223
AjnI	CCWGG	4 cut(s)	27, 228, 1034, 1308
AleI	CACNNNNGTG	1 cut(s)	478
AloI	GAACNNNNNNTCC	2 cut(s)	575, 607
AluBI	AGCT	7 cut(s)	223, 277, 446, 463, 539, 801, 1055
AluI	AGCT	7 cut(s)	223, 277, 446, 463, 539, 801, 1055
Alw26I	GTCTC	1 cut(s)	1493
AlwI	GGATC	3 cut(s)	358, 1467, 1488
AlwNI	CAGNNNCTG	1 cut(s)	804
Ama87I	CYCGRG	2 cut(s)	552, 957
Aor51HI	AGCGCT	2 cut(s)	307, 613
AoxI	GGCC	4 cut(s)	231, 420, 1306, 1405
ApeKI	GCWGC	4 cut(s)	220, 314, 798, 1360
ApoI	RAATTY	2 cut(s)	1211, 1333
Asp700I	GAANNNNTTC	1 cut(s)	1386
AspLEI	GCGC	3 cut(s)	308, 614, 820
AspS9I	GGNCC	2 cut(s)	280, 1405
AsuC2I	CCSGG	1 cut(s)	205
AsuHPI	GGTGA	4 cut(s)	201, 584, 934, 1199
AvaI	CYCGRG	2 cut(s)	552, 957
AvaII	GGWCC	1 cut(s)	280
AxyI	CCTNAGG	1 cut(s)	243
BaeGI	GKGCMC	1 cut(s)	1074
BalI	TGGCCA	1 cut(s)	233
BanII	GRGCYC	1 cut(s)	509
BauI	CACGAG	1 cut(s)	846
BbvI	GCAGC	4 cut(s)	232, 301, 810, 1347
BccI	CCATC	4 cut(s)	292, 407, 431, 751
BciT130I	CCWGG	4 cut(s)	29, 230, 1036, 1310
BciVI	GTATCC	2 cut(s)	17, 260
BcnI	CCSGG	1 cut(s)	205
BcoDI	GTCTC	1 cut(s)	1493
BcuI	ACTAGT	1 cut(s)	349
BfaI	CTAG	4 cut(s)	350, 587, 1052, 1278
BfmI	CTRYAG	3 cut(s)	401, 540, 1089
BfoI	RGCGCY	2 cut(s)	309, 615
BfuI	GTATCC	2 cut(s)	17, 260
BisI	GCNGC	4 cut(s)	221, 315, 799, 1361
BlsI	GCNGC	4 cut(s)	222, 316, 800, 1362
BmcAI	AGTACT	2 cut(s)	1082, 1203
Bme1390I	CCNGG	5 cut(s)	29, 205, 230, 1036, 1310
Bme18I	GGWCC	1 cut(s)	280
BmeT110I	CYCGRG	2 cut(s)	552, 957
BmgBI	CACGTC	1 cut(s)	1223
BmgT120I	GGNCC	2 cut(s)	280, 1405
BmiI	GGNNCC	3 cut(s)	282, 508, 1406
BmrFI	CCNGG	5 cut(s)	29, 205, 230, 1036, 1310
BmsI	GCATC	4 cut(s)	159, 762, 805, 1029
BpmI	CTGGAG	2 cut(s)	50, 1018
Bpu10I	CCTNAGC	1 cut(s)	309
BpuEI	CTTGAG	1 cut(s)	641
BpuMI	CCSGG	1 cut(s)	205
BsaI	GGTCTC	1 cut(s)	1493
BsaJI	CCNNGG	4 cut(s)	121, 958, 1309, 1516
BsaWI	WCCGGW	2 cut(s)	56, 211
Bsc4I	CCNNNNNNNGG	2 cut(s)	245, 373
Bse118I	RCCGGY	1 cut(s)	1252
Bse1I	ACTGG	1 cut(s)	726
Bse21I	CCTNAGG	1 cut(s)	243
BseBI	CCWGG	4 cut(s)	29, 230, 1036, 1310
BseDI	CCNNGG	4 cut(s)	121, 958, 1309, 1516
BseGI	GGATG	5 cut(s)	46, 174, 184, 646, 1044
BseLI	CCNNNNNNNGG	2 cut(s)	245, 373
BseMII	CTCAG	5 cut(s)	234, 323, 507, 1070, 1263
BseNI	ACTGG	1 cut(s)	726
BseRI	GAGGAG	2 cut(s)	23, 782
BseSI	GKGCMC	1 cut(s)	1074
BseXI	GCAGC	4 cut(s)	232, 301, 810, 1347
BsgI	GTGCAG	1 cut(s)	239
BshFI	GGCC	4 cut(s)	233, 422, 1308, 1407
BsiHKCI	CYCGRG	2 cut(s)	552, 957
BsiSI	CCGG	4 cut(s)	57, 204, 212, 1253
BslFI	GGGAC	1 cut(s)	1386
BslI	CCNNNNNNNGG	2 cut(s)	245, 373
BsmAI	GTCTC	1 cut(s)	1493
BsmFI	GGGAC	1 cut(s)	1386
BsnI	GGCC	4 cut(s)	233, 422, 1308, 1407
Bso31I	GGTCTC	1 cut(s)	1493
BsoBI	CYCGRG	2 cut(s)	552, 957
Bsp1286I	GDGCHC	2 cut(s)	509, 1074
Bsp143I	GATC	8 cut(s)	85, 363, 1093, 1120, 1168, 1459, 1480, 1506
Bsp19I	CCATGG	1 cut(s)	121
BspACI	CCGC	3 cut(s)	5, 919, 1023
BspANI	GGCC	4 cut(s)	233, 422, 1308, 1407
BspCNI	CTCAG	5 cut(s)	235, 322, 506, 1069, 1264
BspHI	TCATGA	2 cut(s)	934, 1300
BspLI	GGNNCC	3 cut(s)	282, 508, 1406
BspPI	GGATC	3 cut(s)	358, 1467, 1488
BspTNI	GGTCTC	1 cut(s)	1493
BsrBI	CCGCTC	1 cut(s)	919
BsrFI	RCCGGY	1 cut(s)	1252
BsrI	ACTGG	1 cut(s)	726
BssAI	RCCGGY	1 cut(s)	1252
BssECI	CCNNGG	4 cut(s)	121, 958, 1309, 1516
BssMI	GATC	8 cut(s)	85, 363, 1093, 1120, 1168, 1459, 1480, 1506
BssSI	CACGAG	1 cut(s)	846
BssT1I	CCWWGG	2 cut(s)	121, 1516
Bst2BI	CACGAG	1 cut(s)	846
Bst2UI	CCWGG	4 cut(s)	29, 230, 1036, 1310
Bst4CI	ACNGT	1 cut(s)	199
Bst6I	CTCTTC	1 cut(s)	255
BstC8I	GCNNGC	4 cut(s)	344, 420, 1179, 1254
BstDEI	CTNAG	5 cut(s)	243, 309, 493, 1056, 1272
BstDSI	CCRYGG	1 cut(s)	121
BstEII	GGTNACC	1 cut(s)	207
BstF5I	GGATG	5 cut(s)	46, 174, 184, 646, 1044
BstH2I	RGCGCY	2 cut(s)	309, 615
BstHHI	GCGC	3 cut(s)	308, 614, 820
BstKTI	GATC	8 cut(s)	88, 366, 1096, 1123, 1171, 1462, 1483, 1509
BstMAI	GTCTC	1 cut(s)	1493
BstMBI	GATC	8 cut(s)	85, 363, 1093, 1120, 1168, 1459, 1480, 1506
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 274, 314, 452, 826, 925, 1249
BstNI	CCWGG	4 cut(s)	29, 230, 1036, 1310
BstNSI	RCATGY	3 cut(s)	374, 1234, 1345
BstPI	GGTNACC	1 cut(s)	207
BstSCI	CCNGG	5 cut(s)	27, 203, 228, 1034, 1308
BstSFI	CTRYAG	3 cut(s)	401, 540, 1089
BstSLI	GKGCMC	1 cut(s)	1074
BstV1I	GCAGC	4 cut(s)	232, 301, 810, 1347
BstX2I	RGATCY	3 cut(s)	363, 1459, 1480
BstXI	CCANNNNNNTGG	1 cut(s)	480
BstYI	RGATCY	3 cut(s)	363, 1459, 1480
Bsu36I	CCTNAGG	1 cut(s)	243
BsuI	GTATCC	2 cut(s)	17, 260
BsuRI	GGCC	4 cut(s)	233, 422, 1308, 1407
BtgI	CCRYGG	1 cut(s)	121
BtrI	CACGTC	1 cut(s)	1223
BtsCI	GGATG	5 cut(s)	46, 174, 184, 646, 1044
BtsI	GCAGTG	1 cut(s)	650
BtsIMutI	CAGTG	2 cut(s)	195, 650
Cac8I	GCNNGC	4 cut(s)	344, 420, 1179, 1254
CaiI	CAGNNNCTG	1 cut(s)	804
CciI	TCATGA	2 cut(s)	934, 1300
CfoI	GCGC	3 cut(s)	308, 614, 820
Cfr10I	RCCGGY	1 cut(s)	1252
Cfr13I	GGNCC	2 cut(s)	280, 1405
Csp6I	GTAC	4 cut(s)	725, 1045, 1081, 1202
CviQI	GTAC	4 cut(s)	725, 1045, 1081, 1202
DdeI	CTNAG	5 cut(s)	243, 309, 493, 1056, 1272
DpnI	GATC	8 cut(s)	87, 365, 1095, 1122, 1170, 1461, 1482, 1508
DpnII	GATC	8 cut(s)	85, 363, 1093, 1120, 1168, 1459, 1480, 1506
DraIII	CACNNNGTG	1 cut(s)	1477
EaeI	YGGCCR	1 cut(s)	231
Eam1104I	CTCTTC	1 cut(s)	255
EarI	CTCTTC	1 cut(s)	255
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	2 cut(s)	121, 1516
Eco147I	AGGCCT	1 cut(s)	1308
Eco24I	GRGCYC	1 cut(s)	509
Eco31I	GGTCTC	1 cut(s)	1493
Eco47I	GGWCC	1 cut(s)	280
Eco47III	AGCGCT	2 cut(s)	307, 613
Eco57I	CTGAAG	1 cut(s)	592
Eco81I	CCTNAGG	1 cut(s)	243
Eco88I	CYCGRG	2 cut(s)	552, 957
Eco91I	GGTNACC	1 cut(s)	207
EcoO109I	RGGNCCY	1 cut(s)	1405
EcoO65I	GGTNACC	1 cut(s)	207
EcoRI	GAATTC	1 cut(s)	1211
EcoRII	CCWGG	4 cut(s)	27, 228, 1034, 1308
EcoT14I	CCWWGG	2 cut(s)	121, 1516
EcoT22I	ATGCAT	1 cut(s)	193
EcoT38I	GRGCYC	1 cut(s)	509
ErhI	CCWWGG	2 cut(s)	121, 1516
FaqI	GGGAC	1 cut(s)	1386
FauI	CCCGC	1 cut(s)	912
Fnu4HI	GCNGC	4 cut(s)	221, 315, 799, 1361
FokI	GGATG	5 cut(s)	53, 181, 191, 633, 1051
FriOI	GRGCYC	1 cut(s)	509
Fsp4HI	GCNGC	4 cut(s)	221, 315, 799, 1361
FspBI	CTAG	4 cut(s)	350, 587, 1052, 1278
GlaI	GCGC	3 cut(s)	307, 613, 819
GluI	GCNGC	4 cut(s)	221, 315, 799, 1361
GsuI	CTGGAG	2 cut(s)	50, 1018
HaeII	RGCGCY	2 cut(s)	309, 615
HaeIII	GGCC	4 cut(s)	233, 422, 1308, 1407
HapII	CCGG	4 cut(s)	57, 204, 212, 1253
HhaI	GCGC	3 cut(s)	308, 614, 820
Hin6I	GCGC	3 cut(s)	306, 612, 818
HinP1I	GCGC	3 cut(s)	306, 612, 818
HincII	GTYRAC	1 cut(s)	103
HindII	GTYRAC	1 cut(s)	103
HindIII	AAGCTT	1 cut(s)	461
HpaII	CCGG	4 cut(s)	57, 204, 212, 1253
HphI	GGTGA	4 cut(s)	201, 584, 934, 1199
Hpy166II	GTNNAC	3 cut(s)	74, 80, 103
Hpy188I	TCNGA	5 cut(s)	52, 131, 1059, 1106, 1469
Hpy188III	TCNNGA	8 cut(s)	112, 554, 805, 848, 935, 957, 1301, 1495
Hpy8I	GTNNAC	3 cut(s)	74, 80, 103
HpyAV	CCTTC	7 cut(s)	176, 478, 574, 733, 891, 1148, 1298
HpyCH4III	ACNGT	1 cut(s)	199
HpyCH4IV	ACGT	6 cut(s)	76, 105, 135, 479, 912, 1222
HpyCH4V	TGCA	8 cut(s)	68, 143, 191, 220, 268, 317, 1136, 1400
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 274, 314, 452, 826, 925, 1249
HpyF3I	CTNAG	5 cut(s)	243, 309, 493, 1056, 1272
HpySE526I	ACGT	6 cut(s)	76, 105, 135, 479, 912, 1222
HspAI	GCGC	3 cut(s)	306, 612, 818
KroI	GCCGGC	1 cut(s)	1252
KroNI	GCCGGC	1 cut(s)	1254
Kzo9I	GATC	8 cut(s)	85, 363, 1093, 1120, 1168, 1459, 1480, 1506
LmnI	GCTCC	2 cut(s)	512, 523
Lsp1109I	GCAGC	4 cut(s)	232, 301, 810, 1347
LweI	GCATC	4 cut(s)	159, 762, 805, 1029
MaeI	CTAG	4 cut(s)	350, 587, 1052, 1278
MaeII	ACGT	6 cut(s)	76, 105, 135, 479, 912, 1222
MaeIII	GTNAC	4 cut(s)	199, 207, 352, 1187
MalI	GATC	8 cut(s)	87, 365, 1095, 1122, 1170, 1461, 1482, 1508
MbiI	CCGCTC	1 cut(s)	919
MboI	GATC	8 cut(s)	85, 363, 1093, 1120, 1168, 1459, 1480, 1506
MboII	GAAGA	7 cut(s)	272, 554, 635, 917, 1207, 1394, 1510
MflI	RGATCY	3 cut(s)	363, 1459, 1480
MhlI	GDGCHC	2 cut(s)	509, 1074
MlsI	TGGCCA	1 cut(s)	233
MluCI	AATT	6 cut(s)	15, 438, 511, 784, 1211, 1333
MluNI	TGGCCA	1 cut(s)	233
MlyI	GAGTC	5 cut(s)	41, 75, 544, 947, 1368
MmeI	TCCRAC	1 cut(s)	391
Mox20I	TGGCCA	1 cut(s)	233
Mph1103I	ATGCAT	1 cut(s)	193
MroNI	GCCGGC	1 cut(s)	1252
MroXI	GAANNNNTTC	1 cut(s)	1386
MscI	TGGCCA	1 cut(s)	233
MseI	TTAA	3 cut(s)	441, 498, 689
MslI	CAYNNNNRTG	1 cut(s)	478
Msp20I	TGGCCA	1 cut(s)	233
MspA1I	CMGCKG	2 cut(s)	223, 1025
MspI	CCGG	4 cut(s)	57, 204, 212, 1253
MspR9I	CCNGG	5 cut(s)	29, 205, 230, 1036, 1310
MvaI	CCWGG	4 cut(s)	29, 230, 1036, 1310
MwoI	GCNNNNNNNGC	7 cut(s)	11, 274, 314, 452, 826, 925, 1249
NaeI	GCCGGC	1 cut(s)	1254
NciI	CCSGG	1 cut(s)	205
NcoI	CCATGG	1 cut(s)	121
NdeII	GATC	8 cut(s)	85, 363, 1093, 1120, 1168, 1459, 1480, 1506
NgoMIV	GCCGGC	1 cut(s)	1252
NlaIV	GGNNCC	3 cut(s)	282, 508, 1406
NmuCI	GTSAC	2 cut(s)	207, 1187
NsiI	ATGCAT	1 cut(s)	193
NspI	RCATGY	3 cut(s)	374, 1234, 1345
OliI	CACNNNNGTG	1 cut(s)	478
PaeR7I	CTCGAG	1 cut(s)	552
PagI	TCATGA	2 cut(s)	934, 1300
PceI	AGGCCT	1 cut(s)	1308
PciI	ACATGT	1 cut(s)	370
PcsI	WCGNNNNNNNCGW	1 cut(s)	90
PdiI	GCCGGC	1 cut(s)	1254
PdmI	GAANNNNTTC	1 cut(s)	1386
PfeI	GAWTC	5 cut(s)	53, 559, 851, 931, 1432
PflMI	CCANNNNNTGG	1 cut(s)	373
PfoI	TCCNGGA	1 cut(s)	1034
PkrI	GCNGC	4 cut(s)	222, 316, 800, 1362
PleI	GAGTC	5 cut(s)	40, 75, 544, 946, 1368
PpsI	GAGTC	5 cut(s)	40, 75, 544, 946, 1368
PscI	ACATGT	1 cut(s)	370
PsiI	TTATAA	2 cut(s)	1260, 1525
Psp1406I	AACGTT	1 cut(s)	105
Psp6I	CCWGG	4 cut(s)	27, 228, 1034, 1308
PspEI	GGTNACC	1 cut(s)	207
PspGI	CCWGG	4 cut(s)	27, 228, 1034, 1308
PspN4I	GGNNCC	3 cut(s)	282, 508, 1406
PspPI	GGNCC	2 cut(s)	280, 1405
PstNI	CAGNNNCTG	1 cut(s)	804
PsuI	RGATCY	3 cut(s)	363, 1459, 1480
PvuII	CAGCTG	1 cut(s)	223
RsaI	GTAC	4 cut(s)	726, 1046, 1082, 1203
RsaNI	GTAC	4 cut(s)	725, 1045, 1081, 1202
RseI	CAYNNNNRTG	1 cut(s)	478
SaqAI	TTAA	3 cut(s)	441, 498, 689
SatI	GCNGC	4 cut(s)	221, 315, 799, 1361
Sau3AI	GATC	8 cut(s)	85, 363, 1093, 1120, 1168, 1459, 1480, 1506
Sau96I	GGNCC	2 cut(s)	280, 1405
ScaI	AGTACT	2 cut(s)	1082, 1203
SchI	GAGTC	5 cut(s)	41, 75, 544, 947, 1368
ScrFI	CCNGG	5 cut(s)	29, 205, 230, 1036, 1310
SduI	GDGCHC	2 cut(s)	509, 1074
SfaNI	GCATC	4 cut(s)	159, 762, 805, 1029
SfcI	CTRYAG	3 cut(s)	401, 540, 1089
Sfr274I	CTCGAG	1 cut(s)	552
SinI	GGWCC	1 cut(s)	280
SlaI	CTCGAG	1 cut(s)	552
SmiMI	CAYNNNNRTG	1 cut(s)	478
SmlI	CTYRAG	2 cut(s)	552, 656
SmoI	CTYRAG	2 cut(s)	552, 656
SpeI	ACTAGT	1 cut(s)	349
Sse9I	AATT	6 cut(s)	15, 438, 511, 784, 1211, 1333
SseBI	AGGCCT	1 cut(s)	1308
SsiI	CCGC	3 cut(s)	5, 919, 1023
SspMI	CTAG	4 cut(s)	350, 587, 1052, 1278
StuI	AGGCCT	1 cut(s)	1308
StyD4I	CCNGG	5 cut(s)	27, 203, 228, 1034, 1308
StyI	CCWWGG	2 cut(s)	121, 1516
TaaI	ACNGT	1 cut(s)	199
TaiI	ACGT	6 cut(s)	79, 108, 138, 482, 915, 1225
TaqI	TCGA	7 cut(s)	84, 553, 1123, 1171, 1235, 1416, 1505
TaqII	GACCGA	1 cut(s)	1438
TasI	AATT	6 cut(s)	15, 438, 511, 784, 1211, 1333
TatI	WGTACW	2 cut(s)	1080, 1201
TfiI	GAWTC	5 cut(s)	53, 559, 851, 931, 1432
Tru1I	TTAA	3 cut(s)	441, 498, 689
Tru9I	TTAA	3 cut(s)	441, 498, 689
TscAI	CASTG	2 cut(s)	202, 657
TseFI	GTSAC	2 cut(s)	207, 1187
TseI	GCWGC	4 cut(s)	220, 314, 798, 1360
Tsp45I	GTSAC	2 cut(s)	207, 1187
TspDTI	ATGAA	7 cut(s)	57, 195, 450, 635, 923, 1125, 1317
TspGWI	ACGGA	1 cut(s)	191
TspRI	CASTG	2 cut(s)	202, 657
Van91I	CCANNNNNTGG	1 cut(s)	373
VpaK11BI	GGWCC	1 cut(s)	280
XapI	RAATTY	2 cut(s)	1211, 1333
XceI	RCATGY	3 cut(s)	374, 1234, 1345
XhoI	CTCGAG	1 cut(s)	552
XmnI	GAANNNNTTC	1 cut(s)	1386
XspI	CTAG	4 cut(s)	350, 587, 1052, 1278
ZrmI	AGTACT	2 cut(s)	1082, 1203
Zsp2I	ATGCAT	1 cut(s)	193

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.