Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005162

Physical Location & Seq

Genomic Coordinates Forward (+)

19431697 .. 19438304

Gene Structure 6608 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ23699

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGGCGGATTCAGACCCCAAAAGAGCGACGGCGGAGGAGGCCGTGCTCGGATACCTAGAGAACCACGACGATATCCCGGACTCTCATCTCTTCGCAGACCAAGCTAAACTCAACCACGACGACATCGCCAATGCTATTAAGAGTCTCACTGGTCACAGATACGTTGACTCTCAGGAGATTACAAAGGAGACATGGTTGCTCACCGAGGAAGGGAAGACATATGCTGTTCATGGAACGCCAGAAGTGCGGCTCTTCCTGTCCATACCGCAACAGGGCATCACAAAAGATGAATTGCAGAAAAAGTTTGATGCATCGGTTTTCAAAATAGCTTGCGCCCAGGCTGCAAAGAATAAATGGGTGGACTTTGGAAAGCAACTAGTGACCAGAAAGATCCAACATGTGGATAATGACAAGGTCCAAACTTTGCTTCTACGGATACAGGACGCAAAGGAAATTCAGGACATCAGCCAAGATGACATCAAGGCTCTCACTAAAAGAAAGCTTATTTCTCTGCAAGTGAAGAAAGGCTTTTCAGTAAGAAGAGGTCTCAATTATGCTCCTCAGAGAAAGAAAGTTGCTACAGATTTGACTCGAGATATGCTGCAGAGCGGTGATTGGAAAGATCTGGAGTACAAAGACTTTAACTTGAACGCTAAAGGTGCGCCTACTGAACGTGTGTTTAAAGCTATTTTTTTGAATGACATTGCTGAAGCTGAATCTGCCAATTTTCAGGTACGGAAGCAATTGAAGGACATTTTCCTTCAAATGGGGTTTGGAGAGATGCCCACTAATAACTATGTCGAGAGCAGCTTCTGGAACTTTGATGCTCTTTTCCAGCCGCAACAACACCCTGCTCGTGATTCACATGATACATTCTTCCTGAAAGTTCCTTCAACTACTAAGGAACTTCCTGAAGATTATGTTGAGAGGGTGAAGCGTATACACGAGTCTGGTGGTCATCAGTCCAGGGGTTATGGATATGATTGGAAAAGAGAGGAAGCTGATAAGAATCTTCTGCGGACTCACACAACTGCTGTTTCCTCCAGGATGCTTTACAAGCTAGCACAGGATTGTGCACAGAAACCTTTCACTCCCAAGAAGTACTTTTCTATAGATCGTGTTTTCAGAAATGAAGCAGTAGATCGAACACATCTTGCAGAGTTCCACCAAATAGAAGGTTTGATATGTGATCGAGGGCTTACTCTGGGCGACTTGATAGGAGTCCTCCAAGACTTCTTCTCACGGCTGGGCATGTCCGATCTGAAATTCAAACCAGCCTATAATCCATATACTGAGCCGAGCATGGAGATTTTCGGTTATCATAAAGGCTTTGGCAAGTATGTAGAAATTGGAAACTCTGGCATGTTCCGGCCTGAAATGTTGCTTCCTATGGGACTCCCAGAAGATGTCAGTGTTATTGCATGGGGCCTCTCCCTGGAAAGACCAACCATGATTCTCTATGGCATTGACAACATTCGAGATCTTTTTGGGCACAAGGTCGATCTAGGTCTCATCAAGAAAAACCCCATCTGTCGGATTGGATTAGAATCTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004826 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006432 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009328 GO:0009987 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0032991 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2d

Protein Analysis

518

Amino Acids

59.26

Weight (kDa)

6.59

Isoelectric Point (pI)

38.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PheRS_DBD3	PF18553	79 - 134	6.7e-12	PheRS DNA binding domain 3
tRNA-synt_2d	PF01409	244 - 502	1.9e-84	tRNA synthetases class II core domain (F)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39280 AT4G39280
fragaria_vesca	FvH4_2g08790 FvH4_2g08790 FvH4_3g28200 FvH4_3g28200
malus_domestica	MD05G1066200.v1.1 MD10G1076200.v1.1
prunus_persica	Prupe.8G096800_v2.0.a1 Prupe.8G096800_v2.0.a1 Prupe.8G096800_v2.0.a1
pyrus_communis	pycom10g05960
rosa_chinensis	RchiOBHm_Chr6g0264251 RchiOBHm_Chr7g0204471
rosa_laevigata	RLG00000003457 RLG00000014275
rosa_multiflora	Rmu_co8442849.1_g000001 Rmu_sc0010483.1_g000023
rosa_roxburghii	Rroxscaffold_176G00431660 Rroxscaffold_3G00253060
rosa_rugosa	Rorug06G0011500 Rorug07G0084400
rosa_samantha	Rh6AG130900 Rh6BG128000 Rh6CG126400 Rh6DG113500 Rh7AG213800 Rh7CG226600 Rh7DG221200
rosa_wichuraiana	Rw6G011440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	400
AccBSI	CCGCTC	1 cut(s)	609
AccI	GTMKAC	1 cut(s)	940
AciI	CCGC	7 cut(s)	5, 32, 247, 266, 609, 839, 1018
AclWI	GGATC	1 cut(s)	385
AcsI	RAATTY	2 cut(s)	453, 1265
AcuI	CTGAAG	2 cut(s)	729, 933
AfaI	GTAC	3 cut(s)	632, 735, 1103
AfiI	CCNNNNNNNGG	6 cut(s)	210, 272, 400, 766, 1435, 1533
AflIII	ACRYGT	2 cut(s)	397, 673
AgsI	TTSAA	7 cut(s)	322, 649, 697, 748, 764, 894, 1270
AhlI	ACTAGT	1 cut(s)	376
AjnI	CCWGG	4 cut(s)	336, 965, 1043, 1434
AjuI	GAANNNNNNNTTGG	2 cut(s)	411, 443
AluBI	AGCT	8 cut(s)	104, 329, 502, 686, 713, 810, 1001, 1060
AluI	AGCT	8 cut(s)	104, 329, 502, 686, 713, 810, 1001, 1060
Alw21I	GWGCWC	2 cut(s)	48, 1078
Alw26I	GTCTC	4 cut(s)	149, 182, 551, 1514
Alw44I	GTGCAC	1 cut(s)	1074
AlwI	GGATC	1 cut(s)	385
AlwNI	CAGNNNCTG	1 cut(s)	813
Ama87I	CYCGRG	1 cut(s)	591
AoxI	GGCC	3 cut(s)	39, 1370, 1426
ApaLI	GTGCAC	1 cut(s)	1074
ApeKI	GCWGC	3 cut(s)	341, 601, 807
ApoI	RAATTY	2 cut(s)	453, 1265
Asp700I	GAANNNNTTC	1 cut(s)	1085
AspLEI	GCGC	2 cut(s)	335, 664
AspS9I	GGNCC	2 cut(s)	415, 1426
AsuC2I	CCSGG	1 cut(s)	77
AsuHPI	GGTGA	3 cut(s)	193, 623, 943
AsuNHI	GCTAGC	1 cut(s)	1060
AvaI	CYCGRG	1 cut(s)	591
AvaII	GGWCC	1 cut(s)	415
BaeGI	GKGCMC	2 cut(s)	1078, 1494
BauI	CACGAG	2 cut(s)	855, 944
BbsI	GAAGAC	1 cut(s)	221
Bbv12I	GWGCWC	2 cut(s)	48, 1078
BbvI	GCAGC	3 cut(s)	328, 588, 819
BccI	CCATC	1 cut(s)	1535
BceAI	ACGGC	3 cut(s)	26, 45, 1259
BciT130I	CCWGG	4 cut(s)	338, 967, 1045, 1436
BciVI	GTATCC	2 cut(s)	44, 429
BcnI	CCSGG	1 cut(s)	77
BcoDI	GTCTC	4 cut(s)	149, 182, 551, 1514
BcuI	ACTAGT	1 cut(s)	376
BfaI	CTAG	4 cut(s)	56, 377, 1061, 1505
BfmI	CTRYAG	3 cut(s)	579, 602, 1110
BfuI	GTATCC	2 cut(s)	44, 429
BglII	AGATCT	2 cut(s)	622, 1480
BisI	GCNGC	5 cut(s)	248, 342, 602, 808, 839
BlsI	GCNGC	5 cut(s)	249, 343, 603, 809, 840
BmcAI	AGTACT	1 cut(s)	1103
Bme1390I	CCNGG	5 cut(s)	77, 338, 967, 1045, 1436
Bme18I	GGWCC	1 cut(s)	415
BmeT110I	CYCGRG	1 cut(s)	591
BmgT120I	GGNCC	2 cut(s)	415, 1426
BmiI	GGNNCC	1 cut(s)	1427
BmrFI	CCNGG	5 cut(s)	77, 338, 967, 1045, 1436
BmsI	GCATC	6 cut(s)	285, 298, 320, 771, 814, 1038
BmtI	GCTAGC	1 cut(s)	1064
BpiI	GAAGAC	1 cut(s)	221
BpmI	CTGGAG	2 cut(s)	647, 1027
BpuMI	CCSGG	1 cut(s)	77
BsaBI	GATNNNNATC	2 cut(s)	1008, 1546
BsaI	GGTCTC	2 cut(s)	551, 1514
BsaJI	CCNNGG	4 cut(s)	204, 336, 966, 1434
BsaXI	ACNNNNNCTCC	2 cut(s)	179, 209
Bsc4I	CCNNNNNNNGG	6 cut(s)	210, 272, 400, 766, 1435, 1533
Bse1I	ACTGG	1 cut(s)	154
Bse3DI	GCAATG	1 cut(s)	702
Bse8I	GATNNNNATC	2 cut(s)	1008, 1546
BseBI	CCWGG	4 cut(s)	338, 967, 1045, 1436
BseDI	CCNNGG	4 cut(s)	204, 336, 966, 1434
BseGI	GGATG	1 cut(s)	1053
BseJI	GATNNNNATC	2 cut(s)	1008, 1546
BseLI	CCNNNNNNNGG	6 cut(s)	210, 272, 400, 766, 1435, 1533
BseMI	GCAATG	1 cut(s)	702
BseMII	CTCAG	3 cut(s)	185, 575, 1284
BseNI	ACTGG	1 cut(s)	154
BseRI	GAGGAG	2 cut(s)	50, 549
BseSI	GKGCMC	2 cut(s)	1078, 1494
BseXI	GCAGC	3 cut(s)	328, 588, 819
BseYI	CCCAGC	1 cut(s)	1246
BshFI	GGCC	3 cut(s)	41, 1372, 1428
BsiHKAI	GWGCWC	2 cut(s)	48, 1078
BsiHKCI	CYCGRG	1 cut(s)	591
BsiSI	CCGG	2 cut(s)	77, 1369
BslFI	GGGAC	1 cut(s)	1407
BslI	CCNNNNNNNGG	6 cut(s)	210, 272, 400, 766, 1435, 1533
BsmAI	GTCTC	4 cut(s)	149, 182, 551, 1514
BsmFI	GGGAC	1 cut(s)	1407
BsnI	GGCC	3 cut(s)	41, 1372, 1428
Bso31I	GGTCTC	2 cut(s)	551, 1514
BsoBI	CYCGRG	1 cut(s)	591
Bsp1286I	GDGCHC	3 cut(s)	48, 1078, 1494
Bsp143I	GATC	8 cut(s)	390, 622, 1114, 1141, 1189, 1258, 1480, 1501
BspACI	CCGC	7 cut(s)	5, 32, 247, 266, 609, 839, 1018
BspANI	GGCC	3 cut(s)	41, 1372, 1428
BspCNI	CTCAG	3 cut(s)	184, 574, 1285
BspLI	GGNNCC	1 cut(s)	1427
BspMAI	CTGCAG	1 cut(s)	606
BspOI	GCTAGC	1 cut(s)	1064
BspPI	GGATC	1 cut(s)	385
BspQI	GCTCTTC	1 cut(s)	257
BspTNI	GGTCTC	2 cut(s)	551, 1514
BsrBI	CCGCTC	1 cut(s)	609
BsrDI	GCAATG	1 cut(s)	702
BsrI	ACTGG	1 cut(s)	154
BssECI	CCNNGG	4 cut(s)	204, 336, 966, 1434
BssMI	GATC	8 cut(s)	390, 622, 1114, 1141, 1189, 1258, 1480, 1501
BssNAI	GTATAC	1 cut(s)	941
BssSI	CACGAG	2 cut(s)	855, 944
Bst1107I	GTATAC	1 cut(s)	941
Bst2BI	CACGAG	2 cut(s)	855, 944
Bst2UI	CCWGG	4 cut(s)	338, 967, 1045, 1436
Bst6I	CTCTTC	3 cut(s)	95, 257, 535
BstC8I	GCNNGC	2 cut(s)	331, 1062
BstDEI	CTNAG	4 cut(s)	171, 561, 900, 1293
BstF5I	GGATG	1 cut(s)	1053
BstHHI	GCGC	2 cut(s)	335, 664
BstKTI	GATC	8 cut(s)	393, 625, 1117, 1144, 1192, 1261, 1483, 1504
BstMAI	GTCTC	4 cut(s)	149, 182, 551, 1514
BstMBI	GATC	8 cut(s)	390, 622, 1114, 1141, 1189, 1258, 1480, 1501
BstMWI	GCNNNNNNNGC	7 cut(s)	38, 101, 244, 341, 659, 719, 1057
BstNI	CCWGG	4 cut(s)	338, 967, 1045, 1436
BstNSI	RCATGY	3 cut(s)	401, 1255, 1366
BstSCI	CCNGG	5 cut(s)	75, 336, 965, 1043, 1434
BstSFI	CTRYAG	3 cut(s)	579, 602, 1110
BstSLI	GKGCMC	2 cut(s)	1078, 1494
BstV1I	GCAGC	3 cut(s)	328, 588, 819
BstV2I	GAAGAC	1 cut(s)	221
BstX2I	RGATCY	3 cut(s)	390, 622, 1480
BstYI	RGATCY	3 cut(s)	390, 622, 1480
BstZ17I	GTATAC	1 cut(s)	941
BsuI	GTATCC	2 cut(s)	44, 429
BsuRI	GGCC	3 cut(s)	41, 1372, 1428
BtgZI	GCGATG	1 cut(s)	109
BtsCI	GGATG	1 cut(s)	1053
BtsIMutI	CAGTG	2 cut(s)	147, 1417
Cac8I	GCNNGC	2 cut(s)	331, 1062
CaiI	CAGNNNCTG	1 cut(s)	813
CfoI	GCGC	2 cut(s)	335, 664
Cfr13I	GGNCC	2 cut(s)	415, 1426
CseI	GACGC	1 cut(s)	452
Csp6I	GTAC	3 cut(s)	631, 734, 1102
CviAII	CATG	9 cut(s)	192, 230, 398, 866, 1252, 1303, 1363, 1422, 1450
CviQI	GTAC	3 cut(s)	631, 734, 1102
DdeI	CTNAG	4 cut(s)	171, 561, 900, 1293
DpnI	GATC	8 cut(s)	392, 624, 1116, 1143, 1191, 1260, 1482, 1503
DpnII	GATC	8 cut(s)	390, 622, 1114, 1141, 1189, 1258, 1480, 1501
DraI	TTTAAA	1 cut(s)	682
Eam1104I	CTCTTC	3 cut(s)	95, 257, 535
EarI	CTCTTC	3 cut(s)	95, 257, 535
EciI	GGCGGA	2 cut(s)	20, 47
Eco31I	GGTCTC	2 cut(s)	551, 1514
Eco32I	GATATC	1 cut(s)	73
Eco47I	GGWCC	1 cut(s)	415
Eco57I	CTGAAG	2 cut(s)	729, 933
Eco88I	CYCGRG	1 cut(s)	591
EcoO109I	RGGNCCY	1 cut(s)	1426
EcoRII	CCWGG	4 cut(s)	336, 965, 1043, 1434
EcoRV	GATATC	1 cut(s)	73
EcoT22I	ATGCAT	1 cut(s)	313
FaeI	CATG	9 cut(s)	195, 233, 401, 869, 1255, 1306, 1366, 1425, 1453
FalI	AAGNNNNNCTT	4 cut(s)	512, 544, 1088, 1120
FaqI	GGGAC	1 cut(s)	1407
FatI	CATG	9 cut(s)	191, 229, 397, 865, 1251, 1302, 1362, 1421, 1449
FauNDI	CATATG	1 cut(s)	220
FblI	GTMKAC	1 cut(s)	940
Fnu4HI	GCNGC	5 cut(s)	248, 342, 602, 808, 839
FokI	GGATG	1 cut(s)	1060
Fsp4HI	GCNGC	5 cut(s)	248, 342, 602, 808, 839
FspBI	CTAG	4 cut(s)	56, 377, 1061, 1505
GlaI	GCGC	2 cut(s)	334, 663
GluI	GCNGC	5 cut(s)	248, 342, 602, 808, 839
GsaI	CCCAGC	1 cut(s)	1250
GsuI	CTGGAG	2 cut(s)	647, 1027
HaeIII	GGCC	3 cut(s)	41, 1372, 1428
HapII	CCGG	2 cut(s)	77, 1369
HgaI	GACGC	1 cut(s)	452
HhaI	GCGC	2 cut(s)	335, 664
Hin1II	CATG	9 cut(s)	195, 233, 401, 869, 1255, 1306, 1366, 1425, 1453
Hin6I	GCGC	2 cut(s)	333, 662
HinP1I	GCGC	2 cut(s)	333, 662
HincII	GTYRAC	1 cut(s)	166
HindII	GTYRAC	1 cut(s)	166
HindIII	AAGCTT	1 cut(s)	500
HpaII	CCGG	2 cut(s)	77, 1369
HphI	GGTGA	3 cut(s)	193, 623, 943
Hpy166II	GTNNAC	4 cut(s)	166, 361, 941, 1076
Hpy188I	TCNGA	8 cut(s)	13, 50, 564, 1127, 1258, 1263, 1536, 1552
Hpy8I	GTNNAC	4 cut(s)	166, 361, 941, 1076
Hpy99I	CGWCG	3 cut(s)	31, 71, 122
HpyAV	CCTTC	5 cut(s)	203, 742, 770, 900, 1169
HpyCH4IV	ACGT	2 cut(s)	162, 673
HpyCH4V	TGCA	8 cut(s)	295, 311, 344, 514, 604, 1076, 1157, 1421
HpyF10VI	GCNNNNNNNGC	7 cut(s)	38, 101, 244, 341, 659, 719, 1057
HpyF3I	CTNAG	4 cut(s)	171, 561, 900, 1293
HpySE526I	ACGT	2 cut(s)	162, 673
Hsp92II	CATG	9 cut(s)	195, 233, 401, 869, 1255, 1306, 1366, 1425, 1453
HspAI	GCGC	2 cut(s)	333, 662
Kzo9I	GATC	8 cut(s)	390, 622, 1114, 1141, 1189, 1258, 1480, 1501
LguI	GCTCTTC	1 cut(s)	257
LmnI	GCTCC	1 cut(s)	562
Lsp1109I	GCAGC	3 cut(s)	328, 588, 819
LweI	GCATC	6 cut(s)	285, 298, 320, 771, 814, 1038
MaeI	CTAG	4 cut(s)	56, 377, 1061, 1505
MaeII	ACGT	2 cut(s)	162, 673
MaeIII	GTNAC	2 cut(s)	152, 379
MalI	GATC	8 cut(s)	392, 624, 1116, 1143, 1191, 1260, 1482, 1503
MbiI	CCGCTC	1 cut(s)	609
MboI	GATC	8 cut(s)	390, 622, 1114, 1141, 1189, 1258, 1480, 1501
MfeI	CAATTG	1 cut(s)	743
MflI	RGATCY	3 cut(s)	390, 622, 1480
MhlI	GDGCHC	3 cut(s)	48, 1078, 1494
MluCI	AATT	7 cut(s)	290, 453, 550, 724, 743, 1265, 1347
MlyI	GAGTC	8 cut(s)	74, 151, 161, 583, 956, 1015, 1230, 1389
MmeI	TCCRAC	2 cut(s)	418, 1514
Mph1103I	ATGCAT	1 cut(s)	313
MroXI	GAANNNNTTC	1 cut(s)	1085
MseI	TTAA	4 cut(s)	138, 642, 681, 1555
MspI	CCGG	2 cut(s)	77, 1369
MspR9I	CCNGG	5 cut(s)	77, 338, 967, 1045, 1436
MunI	CAATTG	1 cut(s)	743
MvaI	CCWGG	4 cut(s)	338, 967, 1045, 1436
MwoI	GCNNNNNNNGC	7 cut(s)	38, 101, 244, 341, 659, 719, 1057
NciI	CCSGG	1 cut(s)	77
NdeI	CATATG	1 cut(s)	220
NdeII	GATC	8 cut(s)	390, 622, 1114, 1141, 1189, 1258, 1480, 1501
NheI	GCTAGC	1 cut(s)	1060
NlaIII	CATG	9 cut(s)	195, 233, 401, 869, 1255, 1306, 1366, 1425, 1453
NlaIV	GGNNCC	1 cut(s)	1427
NmeAIII	GCCGAG	1 cut(s)	1323
NmuCI	GTSAC	2 cut(s)	152, 379
NsiI	ATGCAT	1 cut(s)	313
NspI	RCATGY	3 cut(s)	401, 1255, 1366
PaeR7I	CTCGAG	1 cut(s)	591
PciI	ACATGT	1 cut(s)	397
PciSI	GCTCTTC	1 cut(s)	257
PdmI	GAANNNNTTC	1 cut(s)	1085
PfeI	GAWTC	6 cut(s)	8, 716, 860, 1009, 1453, 1547
PflFI	GACNNNGTC	1 cut(s)	413
PflMI	CCANNNNNTGG	1 cut(s)	400
PfoI	TCCNGGA	2 cut(s)	75, 1043
PkrI	GCNGC	5 cut(s)	249, 343, 603, 809, 840
PleI	GAGTC	8 cut(s)	74, 150, 161, 583, 955, 1015, 1229, 1389
PpsI	GAGTC	8 cut(s)	74, 150, 161, 583, 955, 1015, 1229, 1389
PscI	ACATGT	1 cut(s)	397
Psp6I	CCWGG	4 cut(s)	336, 965, 1043, 1434
PspFI	CCCAGC	1 cut(s)	1246
PspGI	CCWGG	4 cut(s)	336, 965, 1043, 1434
PspN4I	GGNNCC	1 cut(s)	1427
PspPI	GGNCC	2 cut(s)	415, 1426
PstI	CTGCAG	1 cut(s)	606
PstNI	CAGNNNCTG	1 cut(s)	813
PsuI	RGATCY	3 cut(s)	390, 622, 1480
PsyI	GACNNNGTC	1 cut(s)	413
RsaI	GTAC	3 cut(s)	632, 735, 1103
RsaNI	GTAC	3 cut(s)	631, 734, 1102
SapI	GCTCTTC	1 cut(s)	257
SaqAI	TTAA	4 cut(s)	138, 642, 681, 1555
SatI	GCNGC	5 cut(s)	248, 342, 602, 808, 839
Sau3AI	GATC	8 cut(s)	390, 622, 1114, 1141, 1189, 1258, 1480, 1501
Sau96I	GGNCC	2 cut(s)	415, 1426
ScaI	AGTACT	1 cut(s)	1103
SchI	GAGTC	8 cut(s)	74, 151, 161, 583, 956, 1015, 1230, 1389
ScrFI	CCNGG	5 cut(s)	77, 338, 967, 1045, 1436
SduI	GDGCHC	3 cut(s)	48, 1078, 1494
SfaNI	GCATC	6 cut(s)	285, 298, 320, 771, 814, 1038
SfcI	CTRYAG	3 cut(s)	579, 602, 1110
Sfr274I	CTCGAG	1 cut(s)	591
SinI	GGWCC	1 cut(s)	415
SlaI	CTCGAG	1 cut(s)	591
SmlI	CTYRAG	1 cut(s)	591
SmoI	CTYRAG	1 cut(s)	591
SpeI	ACTAGT	1 cut(s)	376
Sse9I	AATT	7 cut(s)	290, 453, 550, 724, 743, 1265, 1347
SsiI	CCGC	7 cut(s)	5, 32, 247, 266, 609, 839, 1018
SspMI	CTAG	4 cut(s)	56, 377, 1061, 1505
StyD4I	CCNGG	5 cut(s)	75, 336, 965, 1043, 1434
TaiI	ACGT	2 cut(s)	165, 676
TaqI	TCGA	6 cut(s)	592, 801, 1144, 1192, 1477, 1500
TasI	AATT	7 cut(s)	290, 453, 550, 724, 743, 1265, 1347
TatI	WGTACW	2 cut(s)	630, 1101
TauI	GCSGC	2 cut(s)	250, 841
TfiI	GAWTC	6 cut(s)	8, 716, 860, 1009, 1453, 1547
Tru1I	TTAA	4 cut(s)	138, 642, 681, 1555
Tru9I	TTAA	4 cut(s)	138, 642, 681, 1555
TscAI	CASTG	2 cut(s)	154, 1417
TseFI	GTSAC	2 cut(s)	152, 379
TseI	GCWGC	3 cut(s)	341, 601, 807
Tsp45I	GTSAC	2 cut(s)	152, 379
TspDTI	ATGAA	3 cut(s)	218, 303, 1146
TspGWI	ACGGA	2 cut(s)	448, 751
TspRI	CASTG	2 cut(s)	154, 1417
Tth111I	GACNNNGTC	1 cut(s)	413
Van91I	CCANNNNNTGG	1 cut(s)	400
VneI	GTGCAC	1 cut(s)	1074
VpaK11BI	GGWCC	1 cut(s)	415
XapI	RAATTY	2 cut(s)	453, 1265
XceI	RCATGY	3 cut(s)	401, 1255, 1366
XhoI	CTCGAG	1 cut(s)	591
XmiI	GTMKAC	1 cut(s)	940
XmnI	GAANNNNTTC	1 cut(s)	1085
XspI	CTAG	4 cut(s)	56, 377, 1061, 1505
ZrmI	AGTACT	1 cut(s)	1103
Zsp2I	ATGCAT	1 cut(s)	313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.