Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0005162

Physical Location & Seq

Genomic Coordinates Reverse (-)

50250694 .. 50257039

Gene Structure 6346 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000014275

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1431 bp

ATGGCGGATTCAGACCCCAAAAGAGCGAAGGCGGAGGAGGCTGTGCTCGGATACCTAGAGAACCACGACGATATCCCGGACTCTCATCTCTTCGCAGCCCAAGCCAAAGTCAACCACGACGACATCGCCAATGCTATTAAGAGTCTCACTGGTCACAGATACGTTGACTCTCAGGAGATTACAAAGGAGACATGGTTGCTCACCGAGGAAGGGAAGACATATGCTGATCATGGAACGCCAGAAGTGCGGCTCTTCCGGTCCATACCGCAAGAGGGCATCACAAAAGATGAATTGCAGATCCAACATGTGGATAATGACCAGGTCCAAACTTTGCTTCTACGGATACAGGACGCAAAGGAAATTCAGGACATCAGCCAAGATGACATCAAGGCTCTCACCAAAAGAAAGCTTATTTCTCTACAAGTGAAGAAGGGCTTTTCAGTAAGAAGAGGTCTTAATTATGCTCCTCAGAGAAAGAAACTTGCTACAGATTTGACTCGAGATATGCTGCAGAGCGGTGATTGGAAAGATCTGGAGTACAAAGACTTTAACTTGAACGCTAAAGGTGCGCCTACTGAACGTGGTTGTCTTCATCCACTGCTGAAGGTACGGAAGCAATTGAAGGACATTTTCCTTCAAATGGGGTTTGGAGAGATGCCCACTAATAACTATGTCGAGAGCAGCTTCTGGAACTTTGATGCTCTTTTCCAGCCGCAACAACACCCTGCTCGTGATTCACATGATACATTCTTCCTGAAAGTTCCTTCAACCACTAAGGAACTTCCTGAAGATTATGTTGAGAGGGTGAAGCATATACATGAGTCTGGTGGTCATCAGTCCAGGGGTTATGGATATGATTGGAAAAGAGAGGAAGCTGATAAGAATCTTCTGCGGACTCACACAACTGCTGTTTCCTCCAGGATGCTTTACAAGCTAGCACAGGATTGTGCACAGAAACCTTTCACTCCCAAGAAGTACTTTTCTATAGATCGTGTTTTCAGAAATGAGGCAGTAGATCGAACACATCTTGCAGAGTTCCACCAAATAGAAGGTTTGATATGTGATCGAGGGCTTACTCTGGGCGACTTGATAGGAGTCCTCCAAGACTTCTTCTCACGGCTGGGCATCTCCGATCTGAAATTCAAACCAGCCTATAATCCATATACTGAGCCTAGCATGGAAATTTTCGGTTATCATAAAGGCTTTGGCAAGTATGTAGAAGTTGGAAACTCTGGCATGTTCCGGCCTGAAATGTTACTTCCTATGGGACTCCCAGAAGATGTCAGTGTTATTGCATGGGGCCTCTCCCTGGAAAGACCAACCATGATTCTCTATGGCATTGACAACATTCGAGATCTTTTTGGGCACAAGGTCGATCTAGGTCTCATCAAGAAAAACCCCATCTGTCGGATTGGATTAGAATCTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004826 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006432 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009328 GO:0009987 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0032991 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2d

Protein Analysis

477

Amino Acids

54.5

Weight (kDa)

6.21

Isoelectric Point (pI)

39.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PheRS_DBD1	PF18552	11 - 65	2.4e-06	PheRS DNA binding domain 1
tRNA-synt_2d	PF01409	183 - 460	2.2e-88	tRNA synthetases class II core domain (F)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39280 AT4G39280
fragaria_vesca	FvH4_2g08790 FvH4_2g08790 FvH4_3g28200 FvH4_3g28200
malus_domestica	MD05G1066200.v1.1 MD10G1076200.v1.1
prunus_persica	Prupe.8G096800_v2.0.a1 Prupe.8G096800_v2.0.a1 Prupe.8G096800_v2.0.a1
pyrus_communis	pycom10g05960
rosa_chinensis	RchiOBHm_Chr6g0264251 RchiOBHm_Chr7g0204471
rosa_laevigata	RLG00000003457 RLG00000014275
rosa_multiflora	Rmu_co8442849.1_g000001 Rmu_sc0010483.1_g000023
rosa_roxburghii	Rroxscaffold_176G00431660 Rroxscaffold_3G00253060
rosa_rugosa	Rorug06G0011500 Rorug07G0084400
rosa_samantha	Rh6AG130900 Rh6BG128000 Rh6CG126400 Rh6DG113500 Rh7AG213800 Rh7CG226600 Rh7DG221200
rosa_wichuraiana	Rw6G011440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	307
AccBSI	CCGCTC	1 cut(s)	516
AciI	CCGC	7 cut(s)	5, 32, 247, 266, 516, 713, 892
AclWI	GGATC	1 cut(s)	292
AcsI	RAATTY	3 cut(s)	360, 1139, 1182
AcuI	CTGAAG	2 cut(s)	623, 807
AfaI	GTAC	3 cut(s)	539, 609, 977
AfiI	CCNNNNNNNGG	6 cut(s)	210, 272, 307, 640, 1309, 1407
AflIII	ACRYGT	1 cut(s)	304
AgsI	TTSAA	5 cut(s)	556, 622, 638, 768, 1144
AjnI	CCWGG	4 cut(s)	318, 839, 917, 1308
AjuI	GAANNNNNNNTTGG	2 cut(s)	318, 350
AluBI	AGCT	4 cut(s)	409, 684, 875, 934
AluI	AGCT	4 cut(s)	409, 684, 875, 934
Alw21I	GWGCWC	2 cut(s)	48, 952
Alw26I	GTCTC	3 cut(s)	149, 182, 1388
Alw44I	GTGCAC	1 cut(s)	948
AlwI	GGATC	1 cut(s)	292
AlwNI	CAGNNNCTG	1 cut(s)	687
Ama87I	CYCGRG	1 cut(s)	498
AoxI	GGCC	2 cut(s)	1244, 1300
ApaLI	GTGCAC	1 cut(s)	948
ApeKI	GCWGC	3 cut(s)	95, 508, 681
ApoI	RAATTY	3 cut(s)	360, 1139, 1182
Asp700I	GAANNNNTTC	1 cut(s)	959
AspLEI	GCGC	1 cut(s)	571
AspS9I	GGNCC	3 cut(s)	258, 322, 1300
AsuC2I	CCSGG	1 cut(s)	77
AsuHPI	GGTGA	4 cut(s)	193, 388, 530, 817
AsuNHI	GCTAGC	1 cut(s)	934
AvaI	CYCGRG	1 cut(s)	498
AvaII	GGWCC	2 cut(s)	258, 322
BaeGI	GKGCMC	2 cut(s)	952, 1368
BauI	CACGAG	1 cut(s)	729
BbsI	GAAGAC	2 cut(s)	221, 581
Bbv12I	GWGCWC	2 cut(s)	48, 952
BbvI	GCAGC	3 cut(s)	107, 495, 693
BccI	CCATC	1 cut(s)	1409
BceAI	ACGGC	1 cut(s)	1133
BciT130I	CCWGG	4 cut(s)	320, 841, 919, 1310
BciVI	GTATCC	2 cut(s)	44, 336
BclI	TGATCA	1 cut(s)	226
BcnI	CCSGG	1 cut(s)	77
BcoDI	GTCTC	3 cut(s)	149, 182, 1388
BfaI	CTAG	4 cut(s)	56, 935, 1173, 1379
BfmI	CTRYAG	3 cut(s)	486, 509, 984
BfuI	GTATCC	2 cut(s)	44, 336
BglII	AGATCT	2 cut(s)	529, 1354
BisI	GCNGC	5 cut(s)	96, 248, 509, 682, 713
BlsI	GCNGC	5 cut(s)	97, 249, 510, 683, 714
BmcAI	AGTACT	1 cut(s)	977
Bme1390I	CCNGG	5 cut(s)	77, 320, 841, 919, 1310
Bme18I	GGWCC	2 cut(s)	258, 322
BmeT110I	CYCGRG	1 cut(s)	498
BmgT120I	GGNCC	3 cut(s)	258, 322, 1300
BmiI	GGNNCC	1 cut(s)	1301
BmrFI	CCNGG	5 cut(s)	77, 320, 841, 919, 1310
BmsI	GCATC	5 cut(s)	285, 645, 688, 912, 1134
BmtI	GCTAGC	1 cut(s)	938
BpiI	GAAGAC	2 cut(s)	221, 581
BpmI	CTGGAG	2 cut(s)	554, 901
BpuMI	CCSGG	1 cut(s)	77
BsaBI	GATNNNNATC	2 cut(s)	882, 1420
BsaI	GGTCTC	1 cut(s)	1388
BsaJI	CCNNGG	3 cut(s)	204, 840, 1308
BsaWI	WCCGGW	1 cut(s)	255
BsaXI	ACNNNNNCTCC	2 cut(s)	179, 209
Bsc4I	CCNNNNNNNGG	6 cut(s)	210, 272, 307, 640, 1309, 1407
Bse1I	ACTGG	1 cut(s)	154
Bse8I	GATNNNNATC	2 cut(s)	882, 1420
BseBI	CCWGG	4 cut(s)	320, 841, 919, 1310
BseDI	CCNNGG	3 cut(s)	204, 840, 1308
BseGI	GGATG	2 cut(s)	592, 927
BseJI	GATNNNNATC	2 cut(s)	882, 1420
BseLI	CCNNNNNNNGG	6 cut(s)	210, 272, 307, 640, 1309, 1407
BseMII	CTCAG	3 cut(s)	185, 482, 1158
BseNI	ACTGG	1 cut(s)	154
BseRI	GAGGAG	2 cut(s)	50, 456
BseSI	GKGCMC	2 cut(s)	952, 1368
BseXI	GCAGC	3 cut(s)	107, 495, 693
BseYI	CCCAGC	1 cut(s)	1120
BshFI	GGCC	2 cut(s)	1246, 1302
BsiHKAI	GWGCWC	2 cut(s)	48, 952
BsiHKCI	CYCGRG	1 cut(s)	498
BsiSI	CCGG	3 cut(s)	77, 256, 1243
BslFI	GGGAC	1 cut(s)	1281
BslI	CCNNNNNNNGG	6 cut(s)	210, 272, 307, 640, 1309, 1407
BsmAI	GTCTC	3 cut(s)	149, 182, 1388
BsmFI	GGGAC	1 cut(s)	1281
BsnI	GGCC	2 cut(s)	1246, 1302
Bso31I	GGTCTC	1 cut(s)	1388
BsoBI	CYCGRG	1 cut(s)	498
Bsp1286I	GDGCHC	3 cut(s)	48, 952, 1368
Bsp143I	GATC	9 cut(s)	226, 297, 529, 988, 1015, 1063, 1132, 1354, 1375
BspACI	CCGC	7 cut(s)	5, 32, 247, 266, 516, 713, 892
BspANI	GGCC	2 cut(s)	1246, 1302
BspCNI	CTCAG	3 cut(s)	184, 481, 1159
BspLI	GGNNCC	1 cut(s)	1301
BspMAI	CTGCAG	1 cut(s)	513
BspOI	GCTAGC	1 cut(s)	938
BspPI	GGATC	1 cut(s)	292
BspQI	GCTCTTC	1 cut(s)	257
BspTNI	GGTCTC	1 cut(s)	1388
BsrBI	CCGCTC	1 cut(s)	516
BsrI	ACTGG	1 cut(s)	154
BssECI	CCNNGG	3 cut(s)	204, 840, 1308
BssMI	GATC	9 cut(s)	226, 297, 529, 988, 1015, 1063, 1132, 1354, 1375
BssSI	CACGAG	1 cut(s)	729
Bst2BI	CACGAG	1 cut(s)	729
Bst2UI	CCWGG	4 cut(s)	320, 841, 919, 1310
Bst6I	CTCTTC	3 cut(s)	95, 257, 442
BstC8I	GCNNGC	1 cut(s)	936
BstDEI	CTNAG	4 cut(s)	171, 468, 774, 1167
BstF5I	GGATG	2 cut(s)	592, 927
BstHHI	GCGC	1 cut(s)	571
BstKTI	GATC	9 cut(s)	229, 300, 532, 991, 1018, 1066, 1135, 1357, 1378
BstMAI	GTCTC	3 cut(s)	149, 182, 1388
BstMBI	GATC	9 cut(s)	226, 297, 529, 988, 1015, 1063, 1132, 1354, 1375
BstMWI	GCNNNNNNNGC	5 cut(s)	38, 101, 244, 566, 931
BstNI	CCWGG	4 cut(s)	320, 841, 919, 1310
BstNSI	RCATGY	2 cut(s)	308, 1240
BstSCI	CCNGG	5 cut(s)	75, 318, 839, 917, 1308
BstSFI	CTRYAG	3 cut(s)	486, 509, 984
BstSLI	GKGCMC	2 cut(s)	952, 1368
BstV1I	GCAGC	3 cut(s)	107, 495, 693
BstV2I	GAAGAC	2 cut(s)	221, 581
BstX2I	RGATCY	3 cut(s)	297, 529, 1354
BstYI	RGATCY	3 cut(s)	297, 529, 1354
BsuI	GTATCC	2 cut(s)	44, 336
BsuRI	GGCC	2 cut(s)	1246, 1302
BtgZI	GCGATG	1 cut(s)	109
BtsCI	GGATG	2 cut(s)	592, 927
BtsI	GCAGTG	1 cut(s)	596
BtsIMutI	CAGTG	3 cut(s)	147, 596, 1291
Cac8I	GCNNGC	1 cut(s)	936
CaiI	CAGNNNCTG	1 cut(s)	687
CfoI	GCGC	1 cut(s)	571
Cfr13I	GGNCC	3 cut(s)	258, 322, 1300
CseI	GACGC	1 cut(s)	359
CsiI	ACCWGGT	1 cut(s)	318
Csp6I	GTAC	3 cut(s)	538, 608, 976
CviAII	CATG	9 cut(s)	192, 230, 305, 740, 818, 1177, 1237, 1296, 1324
CviQI	GTAC	3 cut(s)	538, 608, 976
DdeI	CTNAG	4 cut(s)	171, 468, 774, 1167
DpnI	GATC	9 cut(s)	228, 299, 531, 990, 1017, 1065, 1134, 1356, 1377
DpnII	GATC	9 cut(s)	226, 297, 529, 988, 1015, 1063, 1132, 1354, 1375
Eam1104I	CTCTTC	3 cut(s)	95, 257, 442
EarI	CTCTTC	3 cut(s)	95, 257, 442
EciI	GGCGGA	2 cut(s)	20, 47
Eco31I	GGTCTC	1 cut(s)	1388
Eco32I	GATATC	1 cut(s)	73
Eco47I	GGWCC	2 cut(s)	258, 322
Eco57I	CTGAAG	2 cut(s)	623, 807
Eco88I	CYCGRG	1 cut(s)	498
EcoO109I	RGGNCCY	1 cut(s)	1300
EcoRII	CCWGG	4 cut(s)	318, 839, 917, 1308
EcoRV	GATATC	1 cut(s)	73
FaeI	CATG	9 cut(s)	195, 233, 308, 743, 821, 1180, 1240, 1299, 1327
FalI	AAGNNNNNCTT	4 cut(s)	419, 451, 962, 994
FaqI	GGGAC	1 cut(s)	1281
FatI	CATG	9 cut(s)	191, 229, 304, 739, 817, 1176, 1236, 1295, 1323
FauNDI	CATATG	1 cut(s)	220
FbaI	TGATCA	1 cut(s)	226
Fnu4HI	GCNGC	5 cut(s)	96, 248, 509, 682, 713
FokI	GGATG	2 cut(s)	579, 934
Fsp4HI	GCNGC	5 cut(s)	96, 248, 509, 682, 713
FspBI	CTAG	4 cut(s)	56, 935, 1173, 1379
GlaI	GCGC	1 cut(s)	570
GluI	GCNGC	5 cut(s)	96, 248, 509, 682, 713
GsaI	CCCAGC	1 cut(s)	1124
GsuI	CTGGAG	2 cut(s)	554, 901
HaeIII	GGCC	2 cut(s)	1246, 1302
HapII	CCGG	3 cut(s)	77, 256, 1243
HgaI	GACGC	1 cut(s)	359
HhaI	GCGC	1 cut(s)	571
Hin1II	CATG	9 cut(s)	195, 233, 308, 743, 821, 1180, 1240, 1299, 1327
Hin6I	GCGC	1 cut(s)	569
HinP1I	GCGC	1 cut(s)	569
HincII	GTYRAC	2 cut(s)	112, 166
HindII	GTYRAC	2 cut(s)	112, 166
HindIII	AAGCTT	1 cut(s)	407
HpaII	CCGG	3 cut(s)	77, 256, 1243
HphI	GGTGA	4 cut(s)	193, 388, 530, 817
Hpy166II	GTNNAC	3 cut(s)	112, 166, 950
Hpy188I	TCNGA	8 cut(s)	13, 50, 471, 1001, 1132, 1137, 1410, 1426
Hpy8I	GTNNAC	3 cut(s)	112, 166, 950
Hpy99I	CGWCG	2 cut(s)	71, 122
HpyAV	CCTTC	8 cut(s)	22, 203, 424, 598, 616, 644, 774, 1043
HpyCH4IV	ACGT	2 cut(s)	162, 580
HpyCH4V	TGCA	5 cut(s)	295, 511, 950, 1031, 1295
HpyF10VI	GCNNNNNNNGC	5 cut(s)	38, 101, 244, 566, 931
HpyF3I	CTNAG	4 cut(s)	171, 468, 774, 1167
HpySE526I	ACGT	2 cut(s)	162, 580
Hsp92II	CATG	9 cut(s)	195, 233, 308, 743, 821, 1180, 1240, 1299, 1327
HspAI	GCGC	1 cut(s)	569
Ksp22I	TGATCA	1 cut(s)	226
Kzo9I	GATC	9 cut(s)	226, 297, 529, 988, 1015, 1063, 1132, 1354, 1375
LguI	GCTCTTC	1 cut(s)	257
LmnI	GCTCC	1 cut(s)	469
Lsp1109I	GCAGC	3 cut(s)	107, 495, 693
LweI	GCATC	5 cut(s)	285, 645, 688, 912, 1134
MabI	ACCWGGT	1 cut(s)	318
MaeI	CTAG	4 cut(s)	56, 935, 1173, 1379
MaeII	ACGT	2 cut(s)	162, 580
MaeIII	GTNAC	2 cut(s)	152, 1254
MalI	GATC	9 cut(s)	228, 299, 531, 990, 1017, 1065, 1134, 1356, 1377
MbiI	CCGCTC	1 cut(s)	516
MboI	GATC	9 cut(s)	226, 297, 529, 988, 1015, 1063, 1132, 1354, 1375
MfeI	CAATTG	1 cut(s)	617
MflI	RGATCY	3 cut(s)	297, 529, 1354
MhlI	GDGCHC	3 cut(s)	48, 952, 1368
MluCI	AATT	6 cut(s)	290, 360, 457, 617, 1139, 1182
MlyI	GAGTC	8 cut(s)	74, 151, 161, 490, 830, 889, 1104, 1263
MmeI	TCCRAC	3 cut(s)	325, 1204, 1388
MroXI	GAANNNNTTC	1 cut(s)	959
MseI	TTAA	4 cut(s)	138, 456, 549, 1429
MslI	CAYNNNNRTG	1 cut(s)	816
MspI	CCGG	3 cut(s)	77, 256, 1243
MspR9I	CCNGG	5 cut(s)	77, 320, 841, 919, 1310
MunI	CAATTG	1 cut(s)	617
MvaI	CCWGG	4 cut(s)	320, 841, 919, 1310
MwoI	GCNNNNNNNGC	5 cut(s)	38, 101, 244, 566, 931
NciI	CCSGG	1 cut(s)	77
NdeI	CATATG	1 cut(s)	220
NdeII	GATC	9 cut(s)	226, 297, 529, 988, 1015, 1063, 1132, 1354, 1375
NheI	GCTAGC	1 cut(s)	934
NlaIII	CATG	9 cut(s)	195, 233, 308, 743, 821, 1180, 1240, 1299, 1327
NlaIV	GGNNCC	1 cut(s)	1301
NmuCI	GTSAC	1 cut(s)	152
NspI	RCATGY	2 cut(s)	308, 1240
PaeR7I	CTCGAG	1 cut(s)	498
PciI	ACATGT	1 cut(s)	304
PciSI	GCTCTTC	1 cut(s)	257
PdmI	GAANNNNTTC	1 cut(s)	959
PfeI	GAWTC	5 cut(s)	8, 734, 883, 1327, 1421
PflFI	GACNNNGTC	1 cut(s)	320
PflMI	CCANNNNNTGG	1 cut(s)	307
PfoI	TCCNGGA	2 cut(s)	75, 917
PkrI	GCNGC	5 cut(s)	97, 249, 510, 683, 714
PleI	GAGTC	8 cut(s)	74, 150, 161, 490, 829, 889, 1103, 1263
PpsI	GAGTC	8 cut(s)	74, 150, 161, 490, 829, 889, 1103, 1263
PscI	ACATGT	1 cut(s)	304
Psp6I	CCWGG	4 cut(s)	318, 839, 917, 1308
PspFI	CCCAGC	1 cut(s)	1120
PspGI	CCWGG	4 cut(s)	318, 839, 917, 1308
PspN4I	GGNNCC	1 cut(s)	1301
PspPI	GGNCC	3 cut(s)	258, 322, 1300
PstI	CTGCAG	1 cut(s)	513
PstNI	CAGNNNCTG	1 cut(s)	687
PsuI	RGATCY	3 cut(s)	297, 529, 1354
PsyI	GACNNNGTC	1 cut(s)	320
RsaI	GTAC	3 cut(s)	539, 609, 977
RsaNI	GTAC	3 cut(s)	538, 608, 976
RseI	CAYNNNNRTG	1 cut(s)	816
SapI	GCTCTTC	1 cut(s)	257
SaqAI	TTAA	4 cut(s)	138, 456, 549, 1429
SatI	GCNGC	5 cut(s)	96, 248, 509, 682, 713
Sau3AI	GATC	9 cut(s)	226, 297, 529, 988, 1015, 1063, 1132, 1354, 1375
Sau96I	GGNCC	3 cut(s)	258, 322, 1300
ScaI	AGTACT	1 cut(s)	977
SchI	GAGTC	8 cut(s)	74, 151, 161, 490, 830, 889, 1104, 1263
ScrFI	CCNGG	5 cut(s)	77, 320, 841, 919, 1310
SduI	GDGCHC	3 cut(s)	48, 952, 1368
SexAI	ACCWGGT	1 cut(s)	318
SfaNI	GCATC	5 cut(s)	285, 645, 688, 912, 1134
SfcI	CTRYAG	3 cut(s)	486, 509, 984
Sfr274I	CTCGAG	1 cut(s)	498
SinI	GGWCC	2 cut(s)	258, 322
SlaI	CTCGAG	1 cut(s)	498
SmiMI	CAYNNNNRTG	1 cut(s)	816
SmlI	CTYRAG	1 cut(s)	498
SmoI	CTYRAG	1 cut(s)	498
Sse9I	AATT	6 cut(s)	290, 360, 457, 617, 1139, 1182
SsiI	CCGC	7 cut(s)	5, 32, 247, 266, 516, 713, 892
SspMI	CTAG	4 cut(s)	56, 935, 1173, 1379
StyD4I	CCNGG	5 cut(s)	75, 318, 839, 917, 1308
TaiI	ACGT	2 cut(s)	165, 583
TaqI	TCGA	6 cut(s)	499, 675, 1018, 1066, 1351, 1374
TasI	AATT	6 cut(s)	290, 360, 457, 617, 1139, 1182
TatI	WGTACW	2 cut(s)	537, 975
TauI	GCSGC	2 cut(s)	250, 715
TfiI	GAWTC	5 cut(s)	8, 734, 883, 1327, 1421
Tru1I	TTAA	4 cut(s)	138, 456, 549, 1429
Tru9I	TTAA	4 cut(s)	138, 456, 549, 1429
TscAI	CASTG	3 cut(s)	154, 603, 1291
TseFI	GTSAC	1 cut(s)	152
TseI	GCWGC	3 cut(s)	95, 508, 681
Tsp45I	GTSAC	1 cut(s)	152
TspDTI	ATGAA	2 cut(s)	303, 581
TspGWI	ACGGA	2 cut(s)	355, 625
TspRI	CASTG	3 cut(s)	154, 603, 1291
Tth111I	GACNNNGTC	1 cut(s)	320
Van91I	CCANNNNNTGG	1 cut(s)	307
VneI	GTGCAC	1 cut(s)	948
VpaK11BI	GGWCC	2 cut(s)	258, 322
XapI	RAATTY	3 cut(s)	360, 1139, 1182
XceI	RCATGY	2 cut(s)	308, 1240
XhoI	CTCGAG	1 cut(s)	498
XmnI	GAANNNNTTC	1 cut(s)	959
XspI	CTAG	4 cut(s)	56, 935, 1173, 1379
ZrmI	AGTACT	1 cut(s)	977

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.