Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0005162

Physical Location & Seq

Genomic Coordinates Reverse (-)

6652926 .. 6656694

Gene Structure 3769 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0084400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGGCGGTGTTGTCGATGGAGTCGCTGCCGCTGGGATTCCGATTCCGGCCGACGGACGAGGAGCTGATCAACCACTACCTGCGCCTCAAGATCAACGGCCGTCATTCCGAGGTCCAAGTCATCCCCGAAATCGACGTCTGCAAATGGGAGCCCTGGGATTTGCCAAAGCTATCGATGATAAAGTCGGATGATCAGGAATGGTTCTTCTTCTGCCCGCGTGACAGGAAGTATCCGAATGGTCATCGTTCCAACAGAGCCACAGATGCTGGCTACTGGAAGGCGACCGGGAAGGACCGCACCATCAAGTCCCGACAGTTCAAGTCTGCTACTAATAACACGGGCTTGGTTGGGATGAAGAAGACGTTGGTTTTCTACAGAGGCCGCGCTCCCAAGGGCGAGCGTACCAGCTGGATCATGCATGAGTATCGTCCCACCCAGAAGGAGCTGGATGGTACTGCTCCTGGACAGTGTGCGTTTGTTCTGTGTCGCCTGTTCCATAAACCAGAGGAGAAGGCTGAAGTTCTAAAGTATGATGAAGTAGACCAACCTGGCTTATCTCCTACCACCTCTCCTGATGAGACATCTTCAGATATAGTTCAGGAATCAGCTACCCCAGATATGAAAGGTGGAAAGGAATCAGAAGGTATATCGAGGTGGAATGACAGTTTTGACCACATGACCCCTGATACTCTGACTGTGCCACCTAATGACAGTTATATGGCGGCTTCTGATGTGGAAGTCTATGGACCAGAAGACACAATCTTTCCGGGACATTATCATCTGCCAGGAGAAGTGGGGTTCTATGATCCCAATGAACCCACGATTGACTGCAAAATCTTTTCACCATCGCATTCACCATTCAATGCAGAGCTAGATTATGTGGGTTCACCTCTTGAGTTTGGCAATTATAACAATGGATCGCATTTTCAGGATGGCACATGTGAACAGGATGTATACCTCCCAGAGGTGTTCGATGAGTTTGGCAATAAACAGTATGAGAGCTCCTGTGAGGAGTCAACCAGTCAGAAGAACTTGGTTGGGGTCAGTGAGGCCTATCTATCTGATCATTCATTCATGTTGCAAGCCATACCACCAGAAAACTCATCGCTGAATGCTGCATGGGGTTACGCAGACACCAAAATGACCGAGCATAATCTGGACATGAGAGCTCGTGGCTTGTCCAATGAGCAATTTGATACTTCCTACCAAGCTGAAGCTCCAGCATCGATTTATGACCATAAACCTAGAATGGAAAATATCGGTTATCCCGGTAACTCATATGCTGATTCTGCTGTGTCGAATAATTTGGATGAATCTACCAATTGGAAGAATGGTGATAACCATAGCAGTGATCAAGTTGGTAGACCTAGAATCATGATCAGGTCCCGCCTTCCTCAAGAACGACCAAATTCGAACTCTGTGATTCAGGGAGAGGCCTACAGAAGAATTCGTTTAGCAGTTGATAACCATACAAGGGTTTCAAACCATAGCAAAGAAGAAGATGAAGGGCATTCAATTATCACCGAGGCCAGAGAAACTGTACAGGAGAGTCTTACCTCTGATGAACGGGAGGAAGTTCATGCAATAATCGATGAGGAAGAAGTAACCAGTAGGGATTATTCTGCTAACAATGATTCCGATCTTGTTGGTAAAACTGGAATCAGTTGTAATACCAGGCAACCTCCAGAGGCATCAAACTCAGACACACCCGTTACTCAGGGCACGGCTTCTAGAAGAATCCGCTTGGCGATGACTAGTTCACCTGGGTCAGTTGCCGATAGTAATGTGAGAGATACAAAGCATGGGCAAGAAGATGAAGTGGAATCTAGTATTATTGAGGCCTGCGAAGCCATAGAGAAAACTCCTAATCTGAACAAGCAGGAGGTAGAGTGTCATCCTCTGAAGTTGGATGCGAGCAGGAAAATTGCGGTAGAACCCTCAACAACACTGATTGATGAGAACAAGAAAACCACTGAAGAAGTCGCAACAAAGATCAGGTCAAGGACGGGAGGGAATGATAATTCGTTACATAGCAGCCGTATTGGGATGTCAGTGCGTTCCAAGGCAGCAGCATCTAAATATCATGGCCTGATTATCTTGTTCATTATTTCAGTTGGGATTCCCTTGGTTCTAACCATGTTCATAGCCTTTAGTGGGATCTGGATATCCCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004826 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006432 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009328 GO:0009987 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0032991 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2d

Protein Analysis

724

Amino Acids

81.1

Weight (kDa)

5.1

Isoelectric Point (pI)

47.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	10 - 143	2.4e-47	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39280 AT4G39280
fragaria_vesca	FvH4_2g08790 FvH4_2g08790 FvH4_3g28200 FvH4_3g28200
malus_domestica	MD05G1066200.v1.1 MD10G1076200.v1.1
prunus_persica	Prupe.8G096800_v2.0.a1 Prupe.8G096800_v2.0.a1 Prupe.8G096800_v2.0.a1
pyrus_communis	pycom10g05960
rosa_chinensis	RchiOBHm_Chr6g0264251 RchiOBHm_Chr7g0204471
rosa_laevigata	RLG00000003457 RLG00000014275
rosa_multiflora	Rmu_co8442849.1_g000001 Rmu_sc0010483.1_g000023
rosa_roxburghii	Rroxscaffold_176G00431660 Rroxscaffold_3G00253060
rosa_rugosa	Rorug06G0011500 Rorug07G0084400
rosa_samantha	Rh6AG130900 Rh6BG128000 Rh6CG126400 Rh6DG113500 Rh7AG213800 Rh7CG226600 Rh7DG221200
rosa_wichuraiana	Rw6G011440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	909
AatII	GACGTC	1 cut(s)	138
Acc36I	ACCTGC	1 cut(s)	87
AccI	GTMKAC	3 cut(s)	540, 954, 1363
AccII	CGCG	2 cut(s)	217, 384
AciI	CCGC	9 cut(s)	5, 29, 215, 295, 382, 722, 1387, 1741, 1928
AclWI	GGATC	4 cut(s)	419, 800, 925, 2165
AcoI	YGGCCR	2 cut(s)	47, 97
AcsI	RAATTY	2 cut(s)	1408, 1446
AcuI	CTGAAG	5 cut(s)	537, 570, 1233, 1922, 1995
AcyI	GRCGYC	1 cut(s)	135
AfaI	GTAC	3 cut(s)	403, 454, 1542
AfiI	CCNNNNNNNGG	4 cut(s)	52, 964, 1474, 2154
AflIII	ACRYGT	1 cut(s)	938
AgsI	TTSAA	4 cut(s)	319, 862, 1482, 1515
AhlI	ACTAGT	1 cut(s)	1754
AjnI	CCWGG	6 cut(s)	152, 460, 547, 784, 1673, 1762
AjuI	GAANNNNNNNTTGG	2 cut(s)	347, 379
Alw21I	GWGCWC	2 cut(s)	1004, 1171
Alw26I	GTCTC	1 cut(s)	572
AlwI	GGATC	4 cut(s)	419, 800, 925, 2165
AlwNI	CAGNNNCTG	1 cut(s)	266
AoxI	GGCC	8 cut(s)	47, 97, 379, 1050, 1434, 1527, 1839, 2086
ApeKI	GCWGC	5 cut(s)	25, 1115, 2034, 2066, 2069
ApoI	RAATTY	2 cut(s)	1408, 1446
ArsI	GACNNNNNNTTYG	4 cut(s)	120, 152, 1982, 2014
AspLEI	GCGC	2 cut(s)	84, 386
AspS9I	GGNCC	4 cut(s)	112, 292, 746, 1383
AsuC2I	CCSGG	3 cut(s)	286, 768, 1269
AsuHPI	GGTGA	6 cut(s)	834, 846, 879, 1346, 1513, 1752
AsuII	TTCGAA	1 cut(s)	1412
AvaII	GGWCC	4 cut(s)	112, 292, 746, 1383
BaeGI	GKGCMC	1 cut(s)	1724
BanII	GRGCYC	3 cut(s)	153, 1004, 1171
BauI	CACGAG	1 cut(s)	1170
BbsI	GAAGAC	2 cut(s)	365, 759
Bbv12I	GWGCWC	2 cut(s)	1004, 1171
BbvI	GCAGC	5 cut(s)	12, 1102, 2046, 2078, 2081
BccI	CCATC	5 cut(s)	10, 308, 443, 853, 926
BceAI	ACGGC	4 cut(s)	84, 112, 1740, 2022
BcgI	CGANNNNNNTGC	2 cut(s)	407, 441
BciT130I	CCWGG	6 cut(s)	154, 462, 549, 786, 1675, 1764
BciVI	GTATCC	1 cut(s)	240
BclI	TGATCA	5 cut(s)	66, 190, 1063, 1351, 1377
BcnI	CCSGG	3 cut(s)	286, 768, 1269
BcoDI	GTCTC	1 cut(s)	572
BcuI	ACTAGT	1 cut(s)	1754
BfaI	CTAG	6 cut(s)	872, 1245, 1368, 1731, 1755, 1827
BfmI	CTRYAG	2 cut(s)	373, 1438
BfuAI	ACCTGC	1 cut(s)	87
BfuI	GTATCC	1 cut(s)	240
BisI	GCNGC	8 cut(s)	26, 29, 382, 723, 1116, 2035, 2067, 2070
BlsI	GCNGC	8 cut(s)	27, 30, 383, 724, 1117, 2036, 2068, 2071
Bme1390I	CCNGG	9 cut(s)	154, 286, 462, 549, 768, 786, 1269, 1675, 1764
Bme18I	GGWCC	4 cut(s)	112, 292, 746, 1383
BmgT120I	GGNCC	4 cut(s)	112, 292, 746, 1383
BmiI	GGNNCC	2 cut(s)	150, 1385
BmrFI	CCNGG	9 cut(s)	154, 286, 462, 549, 768, 786, 1269, 1675, 1764
BmsI	GCATC	5 cut(s)	253, 1232, 1700, 1900, 2081
BpiI	GAAGAC	2 cut(s)	365, 759
BpmI	CTGGAG	2 cut(s)	1203, 1668
Bpu14I	TTCGAA	1 cut(s)	1412
BpuEI	CTTGAG	3 cut(s)	71, 914, 1380
BpuMI	CCSGG	3 cut(s)	286, 768, 1269
Bsa29I	ATCGAT	3 cut(s)	173, 1226, 1590
BsaBI	GATNNNNATC	1 cut(s)	1638
BsaHI	GRCGYC	1 cut(s)	135
BsaJI	CCNNGG	8 cut(s)	108, 152, 153, 390, 1524, 1763, 2061, 2124
BsaXI	ACNNNNNCTCC	4 cut(s)	553, 583, 1874, 1904
Bsc4I	CCNNNNNNNGG	4 cut(s)	52, 964, 1474, 2154
Bse1I	ACTGG	4 cut(s)	278, 1020, 1608, 1660
Bse8I	GATNNNNATC	1 cut(s)	1638
BseBI	CCWGG	6 cut(s)	154, 462, 549, 786, 1675, 1764
BseCI	ATCGAT	3 cut(s)	173, 1226, 1590
BseDI	CCNNGG	8 cut(s)	108, 152, 153, 390, 1524, 1763, 2061, 2124
BseJI	GATNNNNATC	1 cut(s)	1638
BseLI	CCNNNNNNNGG	4 cut(s)	52, 964, 1474, 2154
BseMII	CTCAG	2 cut(s)	1713, 1730
BseNI	ACTGG	4 cut(s)	278, 1020, 1608, 1660
BseRI	GAGGAG	3 cut(s)	74, 521, 1025
BseSI	GKGCMC	1 cut(s)	1724
BseX3I	CGGCCG	2 cut(s)	47, 97
BseXI	GCAGC	5 cut(s)	12, 1102, 2046, 2078, 2081
BseYI	CCCAGC	1 cut(s)	31
Bsh1236I	CGCG	2 cut(s)	217, 384
Bsh1285I	CGRYCG	3 cut(s)	50, 100, 285
BshFI	GGCC	8 cut(s)	49, 99, 381, 1052, 1436, 1529, 1841, 2088
BshVI	ATCGAT	3 cut(s)	173, 1226, 1590
BsiEI	CGRYCG	3 cut(s)	50, 100, 285
BsiHKAI	GWGCWC	2 cut(s)	1004, 1171
BsiSI	CCGG	4 cut(s)	46, 285, 767, 1269
BslFI	GGGAC	4 cut(s)	292, 414, 783, 1369
BslI	CCNNNNNNNGG	4 cut(s)	52, 964, 1474, 2154
BsmAI	GTCTC	1 cut(s)	572
BsmFI	GGGAC	4 cut(s)	292, 414, 783, 1369
BsmI	GAATGC	3 cut(s)	850, 1117, 1510
BsnI	GGCC	8 cut(s)	49, 99, 381, 1052, 1436, 1529, 1841, 2088
Bsp119I	TTCGAA	1 cut(s)	1412
Bsp1286I	GDGCHC	4 cut(s)	153, 1004, 1171, 1724
Bsp1407I	TGTACA	1 cut(s)	1540
BspACI	CCGC	9 cut(s)	5, 29, 215, 295, 382, 722, 1387, 1741, 1928
BspANI	GGCC	8 cut(s)	49, 99, 381, 1052, 1436, 1529, 1841, 2088
BspCNI	CTCAG	2 cut(s)	1712, 1729
BspDI	ATCGAT	3 cut(s)	173, 1226, 1590
BspFNI	CGCG	2 cut(s)	217, 384
BspHI	TCATGA	1 cut(s)	1374
BspLI	GGNNCC	2 cut(s)	150, 1385
BspMI	ACCTGC	1 cut(s)	87
BspPI	GGATC	4 cut(s)	419, 800, 925, 2165
BspT104I	TTCGAA	1 cut(s)	1412
BsrGI	TGTACA	1 cut(s)	1540
BsrI	ACTGG	4 cut(s)	278, 1020, 1608, 1660
BssECI	CCNNGG	8 cut(s)	108, 152, 153, 390, 1524, 1763, 2061, 2124
BssNAI	GTATAC	1 cut(s)	955
BssNI	GRCGYC	1 cut(s)	135
BssSI	CACGAG	1 cut(s)	1170
BssT1I	CCWWGG	3 cut(s)	390, 2061, 2124
Bst1107I	GTATAC	1 cut(s)	955
Bst2BI	CACGAG	1 cut(s)	1170
Bst2UI	CCWGG	6 cut(s)	154, 462, 549, 786, 1675, 1764
Bst4CI	ACNGT	7 cut(s)	315, 468, 665, 697, 713, 993, 1540
BstACI	GRCGYC	1 cut(s)	135
BstAUI	TGTACA	1 cut(s)	1540
BstBI	TTCGAA	1 cut(s)	1412
BstC8I	GCNNGC	6 cut(s)	215, 268, 398, 1083, 1843, 1915
BstDEI	CTNAG	2 cut(s)	1699, 1716
BstENI	CCTNNNNNAGG	1 cut(s)	962
BstFNI	CGCG	2 cut(s)	217, 384
BstHHI	GCGC	2 cut(s)	84, 386
BstMAI	GTCTC	1 cut(s)	572
BstMCI	CGRYCG	3 cut(s)	50, 100, 285
BstMWI	GCNNNNNNNGC	3 cut(s)	263, 1289, 1847
BstNI	CCWGG	6 cut(s)	154, 462, 549, 786, 1675, 1764
BstNSI	RCATGY	1 cut(s)	942
BstSCI	CCNGG	9 cut(s)	152, 284, 460, 547, 766, 784, 1267, 1673, 1762
BstSFI	CTRYAG	2 cut(s)	373, 1438
BstSLI	GKGCMC	1 cut(s)	1724
BstUI	CGCG	2 cut(s)	217, 384
BstV1I	GCAGC	5 cut(s)	12, 1102, 2046, 2078, 2081
BstV2I	GAAGAC	2 cut(s)	365, 759
BstX2I	RGATCY	1 cut(s)	2157
BstYI	RGATCY	1 cut(s)	2157
BstZ17I	GTATAC	1 cut(s)	955
BstZI	CGGCCG	2 cut(s)	47, 97
Bsu15I	ATCGAT	3 cut(s)	173, 1226, 1590
BsuI	GTATCC	1 cut(s)	240
BsuRI	GGCC	8 cut(s)	49, 99, 381, 1052, 1436, 1529, 1841, 2088
BsuTUI	ATCGAT	3 cut(s)	173, 1226, 1590
BtgZI	GCGATG	3 cut(s)	831, 1089, 1763
BtsI	GCAGTG	1 cut(s)	1354
BtsIMutI	CAGTG	6 cut(s)	473, 1051, 1354, 1946, 1971, 2058
BveI	ACCTGC	1 cut(s)	87
Cac8I	GCNNGC	6 cut(s)	215, 268, 398, 1083, 1843, 1915
CaiI	CAGNNNCTG	1 cut(s)	266
CciI	TCATGA	1 cut(s)	1374
CfoI	GCGC	2 cut(s)	84, 386
Cfr13I	GGNCC	4 cut(s)	112, 292, 746, 1383
ClaI	ATCGAT	3 cut(s)	173, 1226, 1590
Csp6I	GTAC	3 cut(s)	402, 453, 1541
CviQI	GTAC	3 cut(s)	402, 453, 1541
DdeI	CTNAG	2 cut(s)	1699, 1716
EaeI	YGGCCR	2 cut(s)	47, 97
EagI	CGGCCG	2 cut(s)	47, 97
Ecl136II	GAGCTC	2 cut(s)	1002, 1169
EclXI	CGGCCG	2 cut(s)	47, 97
Eco130I	CCWWGG	3 cut(s)	390, 2061, 2124
Eco147I	AGGCCT	3 cut(s)	1052, 1436, 1841
Eco24I	GRGCYC	3 cut(s)	153, 1004, 1171
Eco32I	GATATC	1 cut(s)	2166
Eco47I	GGWCC	4 cut(s)	112, 292, 746, 1383
Eco52I	CGGCCG	2 cut(s)	47, 97
Eco53kI	GAGCTC	2 cut(s)	1002, 1169
Eco57I	CTGAAG	5 cut(s)	537, 570, 1233, 1922, 1995
EcoICRI	GAGCTC	2 cut(s)	1002, 1169
EcoNI	CCTNNNNNAGG	1 cut(s)	962
EcoO109I	RGGNCCY	1 cut(s)	1383
EcoRI	GAATTC	1 cut(s)	1446
EcoRII	CCWGG	6 cut(s)	152, 460, 547, 784, 1673, 1762
EcoRV	GATATC	1 cut(s)	2166
EcoT14I	CCWWGG	3 cut(s)	390, 2061, 2124
EcoT22I	ATGCAT	1 cut(s)	420
EcoT38I	GRGCYC	3 cut(s)	153, 1004, 1171
ErhI	CCWWGG	3 cut(s)	390, 2061, 2124
FaqI	GGGAC	4 cut(s)	292, 414, 783, 1369
FauI	CCCGC	2 cut(s)	222, 1394
FauNDI	CATATG	1 cut(s)	1279
FbaI	TGATCA	5 cut(s)	66, 190, 1063, 1351, 1377
FblI	GTMKAC	3 cut(s)	540, 954, 1363
Fnu4HI	GCNGC	8 cut(s)	26, 29, 382, 723, 1116, 2035, 2067, 2070
FriOI	GRGCYC	3 cut(s)	153, 1004, 1171
Fsp4HI	GCNGC	8 cut(s)	26, 29, 382, 723, 1116, 2035, 2067, 2070
FspBI	CTAG	6 cut(s)	872, 1245, 1368, 1731, 1755, 1827
GlaI	GCGC	2 cut(s)	83, 385
GluI	GCNGC	8 cut(s)	26, 29, 382, 723, 1116, 2035, 2067, 2070
GsaI	CCCAGC	1 cut(s)	35
GsuI	CTGGAG	2 cut(s)	1203, 1668
HaeIII	GGCC	8 cut(s)	49, 99, 381, 1052, 1436, 1529, 1841, 2088
HapII	CCGG	4 cut(s)	46, 285, 767, 1269
HhaI	GCGC	2 cut(s)	84, 386
Hin1I	GRCGYC	1 cut(s)	135
Hin6I	GCGC	2 cut(s)	82, 384
HinP1I	GCGC	2 cut(s)	82, 384
HincII	GTYRAC	1 cut(s)	1017
HindII	GTYRAC	1 cut(s)	1017
HpaII	CCGG	4 cut(s)	46, 285, 767, 1269
HphI	GGTGA	6 cut(s)	834, 846, 879, 1346, 1513, 1752
Hpy166II	GTNNAC	7 cut(s)	541, 887, 944, 955, 1017, 1364, 1760
Hpy8I	GTNNAC	7 cut(s)	541, 887, 944, 955, 1017, 1364, 1760
Hpy99I	CGWCG	2 cut(s)	55, 137
HpyAV	CCTTC	7 cut(s)	271, 283, 433, 505, 635, 1400, 1499
HpyCH4III	ACNGT	7 cut(s)	315, 468, 665, 697, 713, 993, 1540
HpyCH4IV	ACGT	2 cut(s)	135, 362
HpyCH4V	TGCA	7 cut(s)	141, 418, 831, 866, 1081, 1118, 1583
HpyF10VI	GCNNNNNNNGC	3 cut(s)	263, 1289, 1847
HpyF3I	CTNAG	2 cut(s)	1699, 1716
HpySE526I	ACGT	2 cut(s)	135, 362
Hsp92I	GRCGYC	1 cut(s)	135
HspAI	GCGC	2 cut(s)	82, 384
Ksp22I	TGATCA	5 cut(s)	66, 190, 1063, 1351, 1377
LmnI	GCTCC	7 cut(s)	61, 148, 391, 442, 463, 1007, 1222
Lsp1109I	GCAGC	5 cut(s)	12, 1102, 2046, 2078, 2081
LweI	GCATC	5 cut(s)	253, 1232, 1700, 1900, 2081
MaeI	CTAG	6 cut(s)	872, 1245, 1368, 1731, 1755, 1827
MaeII	ACGT	2 cut(s)	135, 362
MaeIII	GTNAC	6 cut(s)	218, 1124, 1271, 1603, 1711, 2025
MfeI	CAATTG	1 cut(s)	1321
MflI	RGATCY	1 cut(s)	2157
MhlI	GDGCHC	4 cut(s)	153, 1004, 1171, 1724
MluCI	AATT	9 cut(s)	904, 1190, 1303, 1321, 1408, 1446, 1515, 1923, 2020
MlyI	GAGTC	3 cut(s)	29, 1022, 1558
MmeI	TCCRAC	3 cut(s)	165, 273, 1887
Mph1103I	ATGCAT	1 cut(s)	420
MslI	CAYNNNNRTG	2 cut(s)	1139, 1347
MspA1I	CMGCKG	2 cut(s)	31, 408
MspI	CCGG	4 cut(s)	46, 285, 767, 1269
MspR9I	CCNGG	9 cut(s)	154, 286, 462, 549, 768, 786, 1269, 1675, 1764
MunI	CAATTG	1 cut(s)	1321
Mva1269I	GAATGC	3 cut(s)	850, 1117, 1510
MvaI	CCWGG	6 cut(s)	154, 462, 549, 786, 1675, 1764
MvnI	CGCG	2 cut(s)	217, 384
MwoI	GCNNNNNNNGC	3 cut(s)	263, 1289, 1847
NciI	CCSGG	3 cut(s)	286, 768, 1269
NdeI	CATATG	1 cut(s)	1279
NlaIV	GGNNCC	2 cut(s)	150, 1385
NmuCI	GTSAC	1 cut(s)	218
NsiI	ATGCAT	1 cut(s)	420
NspI	RCATGY	1 cut(s)	942
NspV	TTCGAA	1 cut(s)	1412
PagI	TCATGA	1 cut(s)	1374
PasI	CCCWGGG	1 cut(s)	153
PceI	AGGCCT	3 cut(s)	1052, 1436, 1841
PciI	ACATGT	1 cut(s)	938
PctI	GAATGC	3 cut(s)	850, 1117, 1510
PfoI	TCCNGGA	2 cut(s)	460, 766
PkrI	GCNGC	8 cut(s)	27, 30, 383, 724, 1117, 2036, 2068, 2071
PleI	GAGTC	3 cut(s)	28, 1021, 1557
PpsI	GAGTC	3 cut(s)	28, 1021, 1557
PpuMI	RGGWCCY	1 cut(s)	1383
PscI	ACATGT	1 cut(s)	938
PsiI	TTATAA	1 cut(s)	909
Psp124BI	GAGCTC	2 cut(s)	1004, 1171
Psp5II	RGGWCCY	1 cut(s)	1383
Psp6I	CCWGG	6 cut(s)	152, 460, 547, 784, 1673, 1762
PspFI	CCCAGC	1 cut(s)	31
PspGI	CCWGG	6 cut(s)	152, 460, 547, 784, 1673, 1762
PspN4I	GGNNCC	2 cut(s)	150, 1385
PspPI	GGNCC	4 cut(s)	112, 292, 746, 1383
PspPPI	RGGWCCY	1 cut(s)	1383
PstNI	CAGNNNCTG	1 cut(s)	266
PsuI	RGATCY	1 cut(s)	2157
PvuII	CAGCTG	1 cut(s)	408
RsaI	GTAC	3 cut(s)	403, 454, 1542
RsaNI	GTAC	3 cut(s)	402, 453, 1541
RseI	CAYNNNNRTG	2 cut(s)	1139, 1347
SacI	GAGCTC	2 cut(s)	1004, 1171
SatI	GCNGC	8 cut(s)	26, 29, 382, 723, 1116, 2035, 2067, 2070
Sau96I	GGNCC	4 cut(s)	112, 292, 746, 1383
SchI	GAGTC	3 cut(s)	29, 1022, 1558
ScrFI	CCNGG	9 cut(s)	154, 286, 462, 549, 768, 786, 1269, 1675, 1764
SduI	GDGCHC	4 cut(s)	153, 1004, 1171, 1724
SfaNI	GCATC	5 cut(s)	253, 1232, 1700, 1900, 2081
SfcI	CTRYAG	2 cut(s)	373, 1438
SfuI	TTCGAA	1 cut(s)	1412
SinI	GGWCC	4 cut(s)	112, 292, 746, 1383
SmiMI	CAYNNNNRTG	2 cut(s)	1139, 1347
SmlI	CTYRAG	3 cut(s)	86, 893, 1395
SmoI	CTYRAG	3 cut(s)	86, 893, 1395
SpeI	ACTAGT	1 cut(s)	1754
Sse9I	AATT	9 cut(s)	904, 1190, 1303, 1321, 1408, 1446, 1515, 1923, 2020
SseBI	AGGCCT	3 cut(s)	1052, 1436, 1841
SsiI	CCGC	9 cut(s)	5, 29, 215, 295, 382, 722, 1387, 1741, 1928
SspMI	CTAG	6 cut(s)	872, 1245, 1368, 1731, 1755, 1827
SstI	GAGCTC	2 cut(s)	1004, 1171
StuI	AGGCCT	3 cut(s)	1052, 1436, 1841
StyD4I	CCNGG	9 cut(s)	152, 284, 460, 547, 766, 784, 1267, 1673, 1762
StyI	CCWWGG	3 cut(s)	390, 2061, 2124
TaaI	ACNGT	7 cut(s)	315, 468, 665, 697, 713, 993, 1540
TaiI	ACGT	2 cut(s)	138, 365
TaqI	TCGA	9 cut(s)	14, 132, 173, 650, 972, 1226, 1298, 1412, 1590
TaqII	GACCGA	1 cut(s)	1160
TasI	AATT	9 cut(s)	904, 1190, 1303, 1321, 1408, 1446, 1515, 1923, 2020
TatI	WGTACW	1 cut(s)	1540
TauI	GCSGC	3 cut(s)	31, 384, 725
TscAI	CASTG	6 cut(s)	473, 1051, 1354, 1953, 1978, 2058
TseFI	GTSAC	1 cut(s)	218
TseI	GCWGC	5 cut(s)	25, 1115, 2034, 2066, 2069
Tsp45I	GTSAC	1 cut(s)	218
TspGWI	ACGGA	1 cut(s)	68
TspRI	CASTG	6 cut(s)	473, 1051, 1354, 1953, 1978, 2058
VpaK11BI	GGWCC	4 cut(s)	112, 292, 746, 1383
XagI	CCTNNNNNAGG	1 cut(s)	962
XapI	RAATTY	2 cut(s)	1408, 1446
XbaI	TCTAGA	1 cut(s)	1730
XceI	RCATGY	1 cut(s)	942
XmiI	GTMKAC	3 cut(s)	540, 954, 1363
XspI	CTAG	6 cut(s)	872, 1245, 1368, 1731, 1755, 1827
ZraI	GACGTC	1 cut(s)	136
Zsp2I	ATGCAT	1 cut(s)	420

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.