Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0005162

Physical Location & Seq

Genomic Coordinates Forward (+)

15013684 .. 15020513

Gene Structure 6830 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG113500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGGCGGATTCAGACCCCAAAAGAGCGAAGGCGGAGGAGGCCGTGCTCGGATACCTAGAGAACCACGACGATATCCCGGACTCTCATCTCTTCGCAGACCAAGCTAAACTCAACCACGACGACATCGCCAATGCTATTAAGAGTCTCACTGGTCACAGATACGTTGACTCTCAGGAGATTACAAAGGAGACATGGTTGCTCACCGAGGAAGGGAAGACATATGCTGTTCATGGAACGCCAGAAGTGCGGCTCTTCCTGTCCATACCGCAAGAGGGCATCACAAAAGATGAATTGCAGAAAAAGTTTGATGCATCGGTTTTCAAAATAGCTTGCGCCCAGGCTGCAAAGAATAAATGGGTGGACTTTGGAAAGCAACTAGTGACCAGAAAGATCCAACATGTGGATAATGACAAGGTCCAAACTTTGCTTCTACGGATACAGGACGCAAAGGAAATTCAGGACATCAGCCAAGATGACATCAAGGCTCTCACCAAAAGAAAGCTTATTTCTCTGCAAGTGAAGAAAGGCTTTTTAGTAAGAAGAGGTCTCAATTATGCTCCTCAGAGAAAGAAAGTTGCTACAGATTTGACTCGAGATATGCTGCAGAGCGGTGATTGGAAAGATCTGGAGTACAAAGACTTTAACTTGAACGCTAAAGGTGCGCCTACTGAACGTGGTTGTCTTCATCCACTGCTGAAGGTACGGAAGCAATTGAAGGACATTTTCCTTCAAATGGGGTTTGGGGAGATGCCCACTAATAACTATGTCGAGAGCAGCTTCTGGAACTTTGATGCTCTTTTCCAGCCGCAACAACACCCTGCTCGTGATTCACATGATACATTCTTCCTGAAAGTTCCTTCAACTACTAAGGAACTTCCTGAAGATTATGTTGAGAGGGTGAAGCGTATACACGAGTCTGGTGGTCATCAGTCCAGGGGTTATGGATATGATTGGAAAAGAGAGGAAGCTGATAAGAATCTTCTGCGGACTCACACAACTGCTGTTTCCTCCAGGATGCTTTACAAGCTAGCACAGGATTGTGCACAGAAACCTTTCACTCCCAAGAAGTACTTTTCTATAGATCGTGTTTTCAGAAATGAAGCAGTAGATCGAACACATCTTGCAGAGTTCCACCAAATAGAAGGTTTGATATGTGATCAAGGGCTTACTCTGGGTGACTTGATAGGAGTCCTCCAAGACTTCTTCTCACGGCTGGGCATGTCCGATCTGAAATTCAAACCAGCCTATAATCCATATACTGAGCCTAGCATGGAGATTTTCGGTTATCATAAAGGCTTTGGCAAGTATGTAGAAATTGGAAACTCTGGCATGTTCCGGCCTGAAATGTTGCTTCCTATGGGACTCCCAGAAGATGTCAGTGTTATTGCATGGGGCCTCTCCCTGGAAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004826 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006432 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009328 GO:0009987 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0032991 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2d

Protein Analysis

470

Amino Acids

53.89

Weight (kDa)

6.96

Isoelectric Point (pI)

39.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PheRS_DBD1	PF18552	11 - 65	1e-05	PheRS DNA binding domain 1
PheRS_DBD3	PF18553	79 - 134	3.3e-12	PheRS DNA binding domain 3
tRNA-synt_2d	PF01409	214 - 470	2.4e-79	tRNA synthetases class II core domain (F)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39280 AT4G39280
fragaria_vesca	FvH4_2g08790 FvH4_2g08790 FvH4_3g28200 FvH4_3g28200
malus_domestica	MD05G1066200.v1.1 MD10G1076200.v1.1
prunus_persica	Prupe.8G096800_v2.0.a1 Prupe.8G096800_v2.0.a1 Prupe.8G096800_v2.0.a1
pyrus_communis	pycom10g05960
rosa_chinensis	RchiOBHm_Chr6g0264251 RchiOBHm_Chr7g0204471
rosa_laevigata	RLG00000003457 RLG00000014275
rosa_multiflora	Rmu_co8442849.1_g000001 Rmu_sc0010483.1_g000023
rosa_roxburghii	Rroxscaffold_176G00431660 Rroxscaffold_3G00253060
rosa_rugosa	Rorug06G0011500 Rorug07G0084400
rosa_samantha	Rh6AG130900 Rh6BG128000 Rh6CG126400 Rh6DG113500 Rh7AG213800 Rh7CG226600 Rh7DG221200
rosa_wichuraiana	Rw6G011440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	400
AccBSI	CCGCTC	1 cut(s)	609
AccI	GTMKAC	1 cut(s)	907
AciI	CCGC	7 cut(s)	5, 32, 247, 266, 609, 806, 985
AclWI	GGATC	1 cut(s)	385
AcsI	RAATTY	2 cut(s)	453, 1232
AcuI	CTGAAG	2 cut(s)	716, 900
AfaI	GTAC	3 cut(s)	632, 702, 1070
AfiI	CCNNNNNNNGG	6 cut(s)	210, 272, 400, 733, 1402, 1407
AflIII	ACRYGT	1 cut(s)	397
AgsI	TTSAA	6 cut(s)	322, 649, 715, 731, 861, 1237
AhlI	ACTAGT	1 cut(s)	376
AjnI	CCWGG	4 cut(s)	336, 932, 1010, 1401
AjuI	GAANNNNNNNTTGG	2 cut(s)	411, 443
AluBI	AGCT	6 cut(s)	104, 329, 502, 777, 968, 1027
AluI	AGCT	6 cut(s)	104, 329, 502, 777, 968, 1027
Alw21I	GWGCWC	2 cut(s)	48, 1045
Alw26I	GTCTC	3 cut(s)	149, 182, 551
Alw44I	GTGCAC	1 cut(s)	1041
AlwI	GGATC	1 cut(s)	385
AlwNI	CAGNNNCTG	1 cut(s)	780
Ama87I	CYCGRG	1 cut(s)	591
AoxI	GGCC	3 cut(s)	39, 1337, 1393
ApaLI	GTGCAC	1 cut(s)	1041
ApeKI	GCWGC	3 cut(s)	341, 601, 774
ApoI	RAATTY	2 cut(s)	453, 1232
Asp700I	GAANNNNTTC	1 cut(s)	1052
AspLEI	GCGC	2 cut(s)	335, 664
AspS9I	GGNCC	2 cut(s)	415, 1393
AsuC2I	CCSGG	1 cut(s)	77
AsuHPI	GGTGA	5 cut(s)	193, 481, 623, 910, 1187
AsuNHI	GCTAGC	1 cut(s)	1027
AvaI	CYCGRG	1 cut(s)	591
AvaII	GGWCC	1 cut(s)	415
BaeGI	GKGCMC	1 cut(s)	1045
BauI	CACGAG	2 cut(s)	822, 911
BbsI	GAAGAC	2 cut(s)	221, 674
Bbv12I	GWGCWC	2 cut(s)	48, 1045
BbvI	GCAGC	3 cut(s)	328, 588, 786
BceAI	ACGGC	2 cut(s)	26, 1226
BciT130I	CCWGG	4 cut(s)	338, 934, 1012, 1403
BciVI	GTATCC	2 cut(s)	44, 429
BclI	TGATCA	1 cut(s)	1156
BcnI	CCSGG	1 cut(s)	77
BcoDI	GTCTC	3 cut(s)	149, 182, 551
BcuI	ACTAGT	1 cut(s)	376
BfaI	CTAG	4 cut(s)	56, 377, 1028, 1266
BfmI	CTRYAG	3 cut(s)	579, 602, 1077
BfuI	GTATCC	2 cut(s)	44, 429
BglII	AGATCT	1 cut(s)	622
BisI	GCNGC	5 cut(s)	248, 342, 602, 775, 806
BlsI	GCNGC	5 cut(s)	249, 343, 603, 776, 807
BmcAI	AGTACT	1 cut(s)	1070
Bme1390I	CCNGG	5 cut(s)	77, 338, 934, 1012, 1403
Bme18I	GGWCC	1 cut(s)	415
BmeT110I	CYCGRG	1 cut(s)	591
BmgT120I	GGNCC	2 cut(s)	415, 1393
BmiI	GGNNCC	1 cut(s)	1394
BmrFI	CCNGG	5 cut(s)	77, 338, 934, 1012, 1403
BmsI	GCATC	6 cut(s)	285, 298, 320, 738, 781, 1005
BmtI	GCTAGC	1 cut(s)	1031
BpiI	GAAGAC	2 cut(s)	221, 674
BpmI	CTGGAG	2 cut(s)	647, 994
BpuMI	CCSGG	1 cut(s)	77
BsaBI	GATNNNNATC	1 cut(s)	975
BsaI	GGTCTC	1 cut(s)	551
BsaJI	CCNNGG	4 cut(s)	204, 336, 933, 1401
BsaXI	ACNNNNNCTCC	2 cut(s)	179, 209
Bsc4I	CCNNNNNNNGG	6 cut(s)	210, 272, 400, 733, 1402, 1407
Bse1I	ACTGG	1 cut(s)	154
Bse8I	GATNNNNATC	1 cut(s)	975
BseBI	CCWGG	4 cut(s)	338, 934, 1012, 1403
BseDI	CCNNGG	4 cut(s)	204, 336, 933, 1401
BseGI	GGATG	2 cut(s)	685, 1020
BseJI	GATNNNNATC	1 cut(s)	975
BseLI	CCNNNNNNNGG	6 cut(s)	210, 272, 400, 733, 1402, 1407
BseMII	CTCAG	3 cut(s)	185, 575, 1251
BseNI	ACTGG	1 cut(s)	154
BseRI	GAGGAG	2 cut(s)	50, 549
BseSI	GKGCMC	1 cut(s)	1045
BseXI	GCAGC	3 cut(s)	328, 588, 786
BseYI	CCCAGC	1 cut(s)	1213
BshFI	GGCC	3 cut(s)	41, 1339, 1395
BsiHKAI	GWGCWC	2 cut(s)	48, 1045
BsiHKCI	CYCGRG	1 cut(s)	591
BsiSI	CCGG	2 cut(s)	77, 1336
BslFI	GGGAC	1 cut(s)	1374
BslI	CCNNNNNNNGG	6 cut(s)	210, 272, 400, 733, 1402, 1407
BsmAI	GTCTC	3 cut(s)	149, 182, 551
BsmFI	GGGAC	1 cut(s)	1374
BsnI	GGCC	3 cut(s)	41, 1339, 1395
Bso31I	GGTCTC	1 cut(s)	551
BsoBI	CYCGRG	1 cut(s)	591
Bsp1286I	GDGCHC	2 cut(s)	48, 1045
Bsp143I	GATC	6 cut(s)	390, 622, 1081, 1108, 1156, 1225
BspACI	CCGC	7 cut(s)	5, 32, 247, 266, 609, 806, 985
BspANI	GGCC	3 cut(s)	41, 1339, 1395
BspCNI	CTCAG	3 cut(s)	184, 574, 1252
BspLI	GGNNCC	1 cut(s)	1394
BspMAI	CTGCAG	1 cut(s)	606
BspOI	GCTAGC	1 cut(s)	1031
BspPI	GGATC	1 cut(s)	385
BspQI	GCTCTTC	1 cut(s)	257
BspTNI	GGTCTC	1 cut(s)	551
BsrBI	CCGCTC	1 cut(s)	609
BsrI	ACTGG	1 cut(s)	154
BssECI	CCNNGG	4 cut(s)	204, 336, 933, 1401
BssMI	GATC	6 cut(s)	390, 622, 1081, 1108, 1156, 1225
BssNAI	GTATAC	1 cut(s)	908
BssSI	CACGAG	2 cut(s)	822, 911
Bst1107I	GTATAC	1 cut(s)	908
Bst2BI	CACGAG	2 cut(s)	822, 911
Bst2UI	CCWGG	4 cut(s)	338, 934, 1012, 1403
Bst6I	CTCTTC	3 cut(s)	95, 257, 535
BstC8I	GCNNGC	2 cut(s)	331, 1029
BstDEI	CTNAG	4 cut(s)	171, 561, 867, 1260
BstF5I	GGATG	2 cut(s)	685, 1020
BstHHI	GCGC	2 cut(s)	335, 664
BstKTI	GATC	6 cut(s)	393, 625, 1084, 1111, 1159, 1228
BstMAI	GTCTC	3 cut(s)	149, 182, 551
BstMBI	GATC	6 cut(s)	390, 622, 1081, 1108, 1156, 1225
BstMWI	GCNNNNNNNGC	6 cut(s)	38, 101, 244, 341, 659, 1024
BstNI	CCWGG	4 cut(s)	338, 934, 1012, 1403
BstNSI	RCATGY	3 cut(s)	401, 1222, 1333
BstSCI	CCNGG	5 cut(s)	75, 336, 932, 1010, 1401
BstSFI	CTRYAG	3 cut(s)	579, 602, 1077
BstSLI	GKGCMC	1 cut(s)	1045
BstV1I	GCAGC	3 cut(s)	328, 588, 786
BstV2I	GAAGAC	2 cut(s)	221, 674
BstX2I	RGATCY	2 cut(s)	390, 622
BstYI	RGATCY	2 cut(s)	390, 622
BstZ17I	GTATAC	1 cut(s)	908
BsuI	GTATCC	2 cut(s)	44, 429
BsuRI	GGCC	3 cut(s)	41, 1339, 1395
BtgZI	GCGATG	1 cut(s)	109
BtsCI	GGATG	2 cut(s)	685, 1020
BtsI	GCAGTG	1 cut(s)	689
BtsIMutI	CAGTG	3 cut(s)	147, 689, 1384
Cac8I	GCNNGC	2 cut(s)	331, 1029
CaiI	CAGNNNCTG	1 cut(s)	780
CfoI	GCGC	2 cut(s)	335, 664
Cfr13I	GGNCC	2 cut(s)	415, 1393
CseI	GACGC	1 cut(s)	452
Csp6I	GTAC	3 cut(s)	631, 701, 1069
CviAII	CATG	8 cut(s)	192, 230, 398, 833, 1219, 1270, 1330, 1389
CviQI	GTAC	3 cut(s)	631, 701, 1069
DdeI	CTNAG	4 cut(s)	171, 561, 867, 1260
DpnI	GATC	6 cut(s)	392, 624, 1083, 1110, 1158, 1227
DpnII	GATC	6 cut(s)	390, 622, 1081, 1108, 1156, 1225
Eam1104I	CTCTTC	3 cut(s)	95, 257, 535
EarI	CTCTTC	3 cut(s)	95, 257, 535
EciI	GGCGGA	2 cut(s)	20, 47
Eco31I	GGTCTC	1 cut(s)	551
Eco32I	GATATC	1 cut(s)	73
Eco47I	GGWCC	1 cut(s)	415
Eco57I	CTGAAG	2 cut(s)	716, 900
Eco88I	CYCGRG	1 cut(s)	591
EcoO109I	RGGNCCY	1 cut(s)	1393
EcoRII	CCWGG	4 cut(s)	336, 932, 1010, 1401
EcoRV	GATATC	1 cut(s)	73
EcoT22I	ATGCAT	1 cut(s)	313
FaeI	CATG	8 cut(s)	195, 233, 401, 836, 1222, 1273, 1333, 1392
FalI	AAGNNNNNCTT	4 cut(s)	512, 544, 1055, 1087
FaqI	GGGAC	1 cut(s)	1374
FatI	CATG	8 cut(s)	191, 229, 397, 832, 1218, 1269, 1329, 1388
FauNDI	CATATG	1 cut(s)	220
FbaI	TGATCA	1 cut(s)	1156
FblI	GTMKAC	1 cut(s)	907
Fnu4HI	GCNGC	5 cut(s)	248, 342, 602, 775, 806
FokI	GGATG	2 cut(s)	672, 1027
Fsp4HI	GCNGC	5 cut(s)	248, 342, 602, 775, 806
FspBI	CTAG	4 cut(s)	56, 377, 1028, 1266
GlaI	GCGC	2 cut(s)	334, 663
GluI	GCNGC	5 cut(s)	248, 342, 602, 775, 806
GsaI	CCCAGC	1 cut(s)	1217
GsuI	CTGGAG	2 cut(s)	647, 994
HaeIII	GGCC	3 cut(s)	41, 1339, 1395
HapII	CCGG	2 cut(s)	77, 1336
HgaI	GACGC	1 cut(s)	452
HhaI	GCGC	2 cut(s)	335, 664
Hin1II	CATG	8 cut(s)	195, 233, 401, 836, 1222, 1273, 1333, 1392
Hin6I	GCGC	2 cut(s)	333, 662
HinP1I	GCGC	2 cut(s)	333, 662
HincII	GTYRAC	1 cut(s)	166
HindII	GTYRAC	1 cut(s)	166
HindIII	AAGCTT	1 cut(s)	500
HpaII	CCGG	2 cut(s)	77, 1336
HphI	GGTGA	5 cut(s)	193, 481, 623, 910, 1187
Hpy166II	GTNNAC	4 cut(s)	166, 361, 908, 1043
Hpy188I	TCNGA	6 cut(s)	13, 50, 564, 1094, 1225, 1230
Hpy188III	TCNNGA	9 cut(s)	173, 458, 593, 626, 769, 781, 824, 847, 878
Hpy8I	GTNNAC	4 cut(s)	166, 361, 908, 1043
Hpy99I	CGWCG	2 cut(s)	71, 122
HpyAV	CCTTC	7 cut(s)	22, 203, 691, 709, 737, 867, 1136
HpyCH4IV	ACGT	2 cut(s)	162, 673
HpyCH4V	TGCA	8 cut(s)	295, 311, 344, 514, 604, 1043, 1124, 1388
HpyF10VI	GCNNNNNNNGC	6 cut(s)	38, 101, 244, 341, 659, 1024
HpyF3I	CTNAG	4 cut(s)	171, 561, 867, 1260
HpySE526I	ACGT	2 cut(s)	162, 673
Hsp92II	CATG	8 cut(s)	195, 233, 401, 836, 1222, 1273, 1333, 1392
HspAI	GCGC	2 cut(s)	333, 662
Ksp22I	TGATCA	1 cut(s)	1156
Kzo9I	GATC	6 cut(s)	390, 622, 1081, 1108, 1156, 1225
LguI	GCTCTTC	1 cut(s)	257
LmnI	GCTCC	1 cut(s)	562
Lsp1109I	GCAGC	3 cut(s)	328, 588, 786
LweI	GCATC	6 cut(s)	285, 298, 320, 738, 781, 1005
MaeI	CTAG	4 cut(s)	56, 377, 1028, 1266
MaeII	ACGT	2 cut(s)	162, 673
MaeIII	GTNAC	3 cut(s)	152, 379, 1175
MalI	GATC	6 cut(s)	392, 624, 1083, 1110, 1158, 1227
MbiI	CCGCTC	1 cut(s)	609
MboI	GATC	6 cut(s)	390, 622, 1081, 1108, 1156, 1225
MfeI	CAATTG	1 cut(s)	710
MflI	RGATCY	2 cut(s)	390, 622
MhlI	GDGCHC	2 cut(s)	48, 1045
MluCI	AATT	6 cut(s)	290, 453, 550, 710, 1232, 1314
MlyI	GAGTC	8 cut(s)	74, 151, 161, 583, 923, 982, 1197, 1356
MmeI	TCCRAC	1 cut(s)	418
Mph1103I	ATGCAT	1 cut(s)	313
MroXI	GAANNNNTTC	1 cut(s)	1052
MseI	TTAA	2 cut(s)	138, 642
MspI	CCGG	2 cut(s)	77, 1336
MspR9I	CCNGG	5 cut(s)	77, 338, 934, 1012, 1403
MunI	CAATTG	1 cut(s)	710
MvaI	CCWGG	4 cut(s)	338, 934, 1012, 1403
MwoI	GCNNNNNNNGC	6 cut(s)	38, 101, 244, 341, 659, 1024
NciI	CCSGG	1 cut(s)	77
NdeI	CATATG	1 cut(s)	220
NdeII	GATC	6 cut(s)	390, 622, 1081, 1108, 1156, 1225
NheI	GCTAGC	1 cut(s)	1027
NlaIII	CATG	8 cut(s)	195, 233, 401, 836, 1222, 1273, 1333, 1392
NlaIV	GGNNCC	1 cut(s)	1394
NmuCI	GTSAC	3 cut(s)	152, 379, 1175
NsiI	ATGCAT	1 cut(s)	313
NspI	RCATGY	3 cut(s)	401, 1222, 1333
PaeR7I	CTCGAG	1 cut(s)	591
PciI	ACATGT	1 cut(s)	397
PciSI	GCTCTTC	1 cut(s)	257
PdmI	GAANNNNTTC	1 cut(s)	1052
PfeI	GAWTC	3 cut(s)	8, 827, 976
PflFI	GACNNNGTC	1 cut(s)	413
PflMI	CCANNNNNTGG	1 cut(s)	400
PfoI	TCCNGGA	2 cut(s)	75, 1010
PkrI	GCNGC	5 cut(s)	249, 343, 603, 776, 807
PleI	GAGTC	8 cut(s)	74, 150, 161, 583, 922, 982, 1196, 1356
PpsI	GAGTC	8 cut(s)	74, 150, 161, 583, 922, 982, 1196, 1356
PscI	ACATGT	1 cut(s)	397
Psp6I	CCWGG	4 cut(s)	336, 932, 1010, 1401
PspFI	CCCAGC	1 cut(s)	1213
PspGI	CCWGG	4 cut(s)	336, 932, 1010, 1401
PspN4I	GGNNCC	1 cut(s)	1394
PspPI	GGNCC	2 cut(s)	415, 1393
PstI	CTGCAG	1 cut(s)	606
PstNI	CAGNNNCTG	1 cut(s)	780
PsuI	RGATCY	2 cut(s)	390, 622
PsyI	GACNNNGTC	1 cut(s)	413
RsaI	GTAC	3 cut(s)	632, 702, 1070
RsaNI	GTAC	3 cut(s)	631, 701, 1069
SapI	GCTCTTC	1 cut(s)	257
SaqAI	TTAA	2 cut(s)	138, 642
SatI	GCNGC	5 cut(s)	248, 342, 602, 775, 806
Sau3AI	GATC	6 cut(s)	390, 622, 1081, 1108, 1156, 1225
Sau96I	GGNCC	2 cut(s)	415, 1393
ScaI	AGTACT	1 cut(s)	1070
SchI	GAGTC	8 cut(s)	74, 151, 161, 583, 923, 982, 1197, 1356
ScrFI	CCNGG	5 cut(s)	77, 338, 934, 1012, 1403
SduI	GDGCHC	2 cut(s)	48, 1045
SfaNI	GCATC	6 cut(s)	285, 298, 320, 738, 781, 1005
SfcI	CTRYAG	3 cut(s)	579, 602, 1077
Sfr274I	CTCGAG	1 cut(s)	591
SinI	GGWCC	1 cut(s)	415
SlaI	CTCGAG	1 cut(s)	591
SmlI	CTYRAG	1 cut(s)	591
SmoI	CTYRAG	1 cut(s)	591
SpeI	ACTAGT	1 cut(s)	376
Sse9I	AATT	6 cut(s)	290, 453, 550, 710, 1232, 1314
SsiI	CCGC	7 cut(s)	5, 32, 247, 266, 609, 806, 985
SspMI	CTAG	4 cut(s)	56, 377, 1028, 1266
StyD4I	CCNGG	5 cut(s)	75, 336, 932, 1010, 1401
TaiI	ACGT	2 cut(s)	165, 676
TaqI	TCGA	3 cut(s)	592, 768, 1111
TasI	AATT	6 cut(s)	290, 453, 550, 710, 1232, 1314
TatI	WGTACW	2 cut(s)	630, 1068
TauI	GCSGC	2 cut(s)	250, 808
TfiI	GAWTC	3 cut(s)	8, 827, 976
Tru1I	TTAA	2 cut(s)	138, 642
Tru9I	TTAA	2 cut(s)	138, 642
TscAI	CASTG	3 cut(s)	154, 696, 1384
TseFI	GTSAC	3 cut(s)	152, 379, 1175
TseI	GCWGC	3 cut(s)	341, 601, 774
Tsp45I	GTSAC	3 cut(s)	152, 379, 1175
TspDTI	ATGAA	4 cut(s)	218, 303, 674, 1113
TspGWI	ACGGA	2 cut(s)	448, 718
TspRI	CASTG	3 cut(s)	154, 696, 1384
Tth111I	GACNNNGTC	1 cut(s)	413
Van91I	CCANNNNNTGG	1 cut(s)	400
VneI	GTGCAC	1 cut(s)	1041
VpaK11BI	GGWCC	1 cut(s)	415
XapI	RAATTY	2 cut(s)	453, 1232
XceI	RCATGY	3 cut(s)	401, 1222, 1333
XhoI	CTCGAG	1 cut(s)	591
XmiI	GTMKAC	1 cut(s)	907
XmnI	GAANNNNTTC	1 cut(s)	1052
XspI	CTAG	4 cut(s)	56, 377, 1028, 1266
ZrmI	AGTACT	1 cut(s)	1070
Zsp2I	ATGCAT	1 cut(s)	313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.