Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0005162

Physical Location & Seq

Genomic Coordinates Forward (+)

20120829 .. 20127122

Gene Structure 6294 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G011440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGGCGGACTCAGACCCCAAAAGAGCGAAGGCGGAGGAGGCCGTGCTCGGATACCTAGAGAACCACGACGATATCCCGGACTCTCATCTCTTCGCAGACCAAGCTAAACTCAACCACGACGACATCGCCAATGCTATTAAGAGTCTCACCGGTCACAGATACGTTGACTCTCAGGAGATTACAAAGGAGACATGGTTGCTCACCGAGGAAGGGAAGACATATGCTGTTCATGGAACGCCAGAAGTGCGGCTCTTCCTGTCCATACCGCAAGAGGGCATCACGAAAGATGATTGCAGGTGGGATGTTTTAATGCAGAAAAAGTTTGATGCATCGGTTTTCAAAATAGCTTGCGCCCAGGCTGCAAAGAATAAATGGGTGGACTTTGGAAAGCAACTAGTGGCCAGAAAGATCCAACATGTGGATAATGACAAGGTCCAAACTTTACTTCTACGGATACAGGACGCAAAGGACATCAGCCAAGATGACATCAAGGCTCTCACCAAAAGAAAGCTTATTTCTCTACAAGTGAAGAAAGGCTTTTCAGTAAGAAGAGGTCTCAATTATGCTCCTCAGAGAAAGAAAGTTGCTACAGATTTGACTCGAGATATGCTGCAGAGCGGTGATTGGAAAGATCTGGAGTACAAAGACTTTAACTTGAACGCTAAAGGTGCGCCTACTGAACGTGGTTGTCTTCATCCACTGCTGAAGGTACGGAAGCAATTGAAGGACATTTTCCTTCAAATGGGGTTTGGAGAGATGCCCACTAATAACTATGTCGAGAGCAGCTTCTGGAACTTTGATGCTCTTTTCCAGCCACAACAACACCCTGCTCGTGATTCACATGATACATTCTTCCTGAAAGTTCCTTCAACTACTAAGGAACTTCCTGAAGATTATGTTGAGAGGGTGAAGCGTATACACGAGTCTGGTGGTCATCAGTCCAGGGGTTATGGATATGATTGGAAAAGAGAGGAAGCTGATAAGAATCTTCTGCGGACTCACACAACTGCTGTTTCCTCCAGGATGCTTTACAAGCTAGCACAGAAACCTTTCACTCCCAAGAAGTACTTTTCTATAGATCGTGTTTTCAGAAATGAAGCAGTAGATCGAACACATCTTGCAGAGTTCCACCAAATAGAAGGTTTGATATGTGATCGAGGGCTTACTCTGGGCGACTTGATAGGAGTCCTCCAAGACTTCTTCTCACGGCTGGGCATGTCCGATCTGAAATTCAAACCAGCCTATAATCCATATACTGAGCCTAGCATGGAGATTTTCGGTTATCATAAAGGCTTTGGCAAGTATGTAGAAATTGGAAACTCTGGCATGTTCCGGCCTGAAATGTTACTTCCTATGGGACTCCCAGAAGATGTCAGTGTTATTGCATGGGGCCTCTCCCTGGAAAGACCAACCATGATTCTCTATGGCATTGACAACATTCGAGATCTTTTTGGGCACAAGGTCGATCTAGGTCTCATCAAGAAAAACCCCATCTGTCGGATTGGATTAGAATCTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004826 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006432 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009328 GO:0009987 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0032991 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2d

Protein Analysis

506

Amino Acids

58.0

Weight (kDa)

8.06

Isoelectric Point (pI)

38.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PheRS_DBD3	PF18553	79 - 140	1.4e-07	PheRS DNA binding domain 3
tRNA-synt_2d	PF01409	217 - 490	3.4e-89	tRNA synthetases class II core domain (F)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39280 AT4G39280
fragaria_vesca	FvH4_2g08790 FvH4_2g08790 FvH4_3g28200 FvH4_3g28200
malus_domestica	MD05G1066200.v1.1 MD10G1076200.v1.1
prunus_persica	Prupe.8G096800_v2.0.a1 Prupe.8G096800_v2.0.a1 Prupe.8G096800_v2.0.a1
pyrus_communis	pycom10g05960
rosa_chinensis	RchiOBHm_Chr6g0264251 RchiOBHm_Chr7g0204471
rosa_laevigata	RLG00000003457 RLG00000014275
rosa_multiflora	Rmu_co8442849.1_g000001 Rmu_sc0010483.1_g000023
rosa_roxburghii	Rroxscaffold_176G00431660 Rroxscaffold_3G00253060
rosa_rugosa	Rorug06G0011500 Rorug07G0084400
rosa_samantha	Rh6AG130900 Rh6BG128000 Rh6CG126400 Rh6DG113500 Rh7AG213800 Rh7CG226600 Rh7DG221200
rosa_wichuraiana	Rw6G011440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	285
Acc36I	ACCTGC	1 cut(s)	285
AccB7I	CCANNNNNTGG	1 cut(s)	418
AccBSI	CCGCTC	1 cut(s)	618
AccI	GTMKAC	1 cut(s)	916
AciI	CCGC	6 cut(s)	5, 32, 247, 266, 618, 994
AclWI	GGATC	1 cut(s)	403
AcoI	YGGCCR	1 cut(s)	399
AcsI	RAATTY	1 cut(s)	1229
AcuI	CTGAAG	2 cut(s)	725, 909
AfaI	GTAC	3 cut(s)	641, 711, 1067
AfiI	CCNNNNNNNGG	6 cut(s)	210, 272, 418, 742, 1399, 1497
AflIII	ACRYGT	1 cut(s)	415
AgeI	ACCGGT	1 cut(s)	149
AgsI	TTSAA	6 cut(s)	340, 658, 724, 740, 870, 1234
AhlI	ACTAGT	1 cut(s)	394
AjnI	CCWGG	4 cut(s)	354, 941, 1019, 1398
AjuI	GAANNNNNNNTTGG	2 cut(s)	429, 461
AluBI	AGCT	6 cut(s)	104, 347, 511, 786, 977, 1036
AluI	AGCT	6 cut(s)	104, 347, 511, 786, 977, 1036
Alw21I	GWGCWC	1 cut(s)	48
Alw26I	GTCTC	4 cut(s)	149, 182, 560, 1478
AlwI	GGATC	1 cut(s)	403
AlwNI	CAGNNNCTG	1 cut(s)	789
Ama87I	CYCGRG	1 cut(s)	600
AoxI	GGCC	4 cut(s)	39, 399, 1334, 1390
ApeKI	GCWGC	3 cut(s)	359, 610, 783
ApoI	RAATTY	1 cut(s)	1229
AsiGI	ACCGGT	1 cut(s)	149
Asp700I	GAANNNNTTC	1 cut(s)	1049
AspLEI	GCGC	2 cut(s)	353, 673
AspS9I	GGNCC	2 cut(s)	433, 1390
AsuC2I	CCSGG	1 cut(s)	77
AsuHPI	GGTGA	5 cut(s)	139, 193, 490, 632, 919
AsuNHI	GCTAGC	1 cut(s)	1036
AvaI	CYCGRG	1 cut(s)	600
AvaII	GGWCC	1 cut(s)	433
BaeGI	GKGCMC	1 cut(s)	1458
BalI	TGGCCA	1 cut(s)	401
BauI	CACGAG	2 cut(s)	831, 920
BbsI	GAAGAC	2 cut(s)	221, 683
Bbv12I	GWGCWC	1 cut(s)	48
BbvI	GCAGC	3 cut(s)	346, 597, 795
BccI	CCATC	1 cut(s)	1499
BceAI	ACGGC	2 cut(s)	26, 1223
BciT130I	CCWGG	4 cut(s)	356, 943, 1021, 1400
BciVI	GTATCC	2 cut(s)	44, 447
BcnI	CCSGG	1 cut(s)	77
BcoDI	GTCTC	4 cut(s)	149, 182, 560, 1478
BcuI	ACTAGT	1 cut(s)	394
BfaI	CTAG	5 cut(s)	56, 395, 1037, 1263, 1469
BfmI	CTRYAG	3 cut(s)	588, 611, 1074
BfuAI	ACCTGC	1 cut(s)	285
BfuI	GTATCC	2 cut(s)	44, 447
BglII	AGATCT	2 cut(s)	631, 1444
BisI	GCNGC	4 cut(s)	248, 360, 611, 784
BlsI	GCNGC	4 cut(s)	249, 361, 612, 785
BmcAI	AGTACT	1 cut(s)	1067
Bme1390I	CCNGG	5 cut(s)	77, 356, 943, 1021, 1400
Bme18I	GGWCC	1 cut(s)	433
BmeT110I	CYCGRG	1 cut(s)	600
BmgT120I	GGNCC	2 cut(s)	433, 1390
BmiI	GGNNCC	1 cut(s)	1391
BmrFI	CCNGG	5 cut(s)	77, 356, 943, 1021, 1400
BmsI	GCATC	6 cut(s)	285, 316, 338, 747, 790, 1014
BmtI	GCTAGC	1 cut(s)	1040
BpiI	GAAGAC	2 cut(s)	221, 683
BpmI	CTGGAG	2 cut(s)	656, 1003
BpuMI	CCSGG	1 cut(s)	77
BsaBI	GATNNNNATC	2 cut(s)	984, 1510
BsaI	GGTCTC	2 cut(s)	560, 1478
BsaJI	CCNNGG	4 cut(s)	204, 354, 942, 1398
BsaWI	WCCGGW	1 cut(s)	149
BsaXI	ACNNNNNCTCC	2 cut(s)	179, 209
Bsc4I	CCNNNNNNNGG	6 cut(s)	210, 272, 418, 742, 1399, 1497
Bse118I	RCCGGY	1 cut(s)	149
Bse8I	GATNNNNATC	2 cut(s)	984, 1510
BseBI	CCWGG	4 cut(s)	356, 943, 1021, 1400
BseDI	CCNNGG	4 cut(s)	204, 354, 942, 1398
BseGI	GGATG	3 cut(s)	307, 694, 1029
BseJI	GATNNNNATC	2 cut(s)	984, 1510
BseLI	CCNNNNNNNGG	6 cut(s)	210, 272, 418, 742, 1399, 1497
BseMII	CTCAG	4 cut(s)	24, 185, 584, 1248
BseRI	GAGGAG	2 cut(s)	50, 558
BseSI	GKGCMC	1 cut(s)	1458
BseXI	GCAGC	3 cut(s)	346, 597, 795
BseYI	CCCAGC	1 cut(s)	1210
BshFI	GGCC	4 cut(s)	41, 401, 1336, 1392
BshTI	ACCGGT	1 cut(s)	149
BsiHKAI	GWGCWC	1 cut(s)	48
BsiHKCI	CYCGRG	1 cut(s)	600
BsiSI	CCGG	3 cut(s)	77, 150, 1333
BslFI	GGGAC	1 cut(s)	1371
BslI	CCNNNNNNNGG	6 cut(s)	210, 272, 418, 742, 1399, 1497
BsmAI	GTCTC	4 cut(s)	149, 182, 560, 1478
BsmFI	GGGAC	1 cut(s)	1371
BsnI	GGCC	4 cut(s)	41, 401, 1336, 1392
Bso31I	GGTCTC	2 cut(s)	560, 1478
BsoBI	CYCGRG	1 cut(s)	600
Bsp1286I	GDGCHC	2 cut(s)	48, 1458
Bsp143I	GATC	8 cut(s)	408, 631, 1078, 1105, 1153, 1222, 1444, 1465
BspACI	CCGC	6 cut(s)	5, 32, 247, 266, 618, 994
BspANI	GGCC	4 cut(s)	41, 401, 1336, 1392
BspCNI	CTCAG	4 cut(s)	23, 184, 583, 1249
BspLI	GGNNCC	1 cut(s)	1391
BspMAI	CTGCAG	1 cut(s)	615
BspMI	ACCTGC	1 cut(s)	285
BspOI	GCTAGC	1 cut(s)	1040
BspPI	GGATC	1 cut(s)	403
BspQI	GCTCTTC	1 cut(s)	257
BspTNI	GGTCTC	2 cut(s)	560, 1478
BsrBI	CCGCTC	1 cut(s)	618
BsrFI	RCCGGY	1 cut(s)	149
BssAI	RCCGGY	1 cut(s)	149
BssECI	CCNNGG	4 cut(s)	204, 354, 942, 1398
BssMI	GATC	8 cut(s)	408, 631, 1078, 1105, 1153, 1222, 1444, 1465
BssNAI	GTATAC	1 cut(s)	917
BssSI	CACGAG	2 cut(s)	831, 920
Bst1107I	GTATAC	1 cut(s)	917
Bst2BI	CACGAG	2 cut(s)	831, 920
Bst2UI	CCWGG	4 cut(s)	356, 943, 1021, 1400
Bst6I	CTCTTC	3 cut(s)	95, 257, 544
BstC8I	GCNNGC	2 cut(s)	349, 1038
BstDEI	CTNAG	5 cut(s)	10, 171, 570, 876, 1257
BstF5I	GGATG	3 cut(s)	307, 694, 1029
BstHHI	GCGC	2 cut(s)	353, 673
BstKTI	GATC	8 cut(s)	411, 634, 1081, 1108, 1156, 1225, 1447, 1468
BstMAI	GTCTC	4 cut(s)	149, 182, 560, 1478
BstMBI	GATC	8 cut(s)	408, 631, 1078, 1105, 1153, 1222, 1444, 1465
BstMWI	GCNNNNNNNGC	6 cut(s)	38, 101, 244, 359, 668, 1033
BstNI	CCWGG	4 cut(s)	356, 943, 1021, 1400
BstNSI	RCATGY	3 cut(s)	419, 1219, 1330
BstSCI	CCNGG	5 cut(s)	75, 354, 941, 1019, 1398
BstSFI	CTRYAG	3 cut(s)	588, 611, 1074
BstSLI	GKGCMC	1 cut(s)	1458
BstV1I	GCAGC	3 cut(s)	346, 597, 795
BstV2I	GAAGAC	2 cut(s)	221, 683
BstX2I	RGATCY	3 cut(s)	408, 631, 1444
BstYI	RGATCY	3 cut(s)	408, 631, 1444
BstZ17I	GTATAC	1 cut(s)	917
BsuI	GTATCC	2 cut(s)	44, 447
BsuRI	GGCC	4 cut(s)	41, 401, 1336, 1392
BtgZI	GCGATG	1 cut(s)	109
BtsCI	GGATG	3 cut(s)	307, 694, 1029
BtsI	GCAGTG	1 cut(s)	698
BtsIMutI	CAGTG	2 cut(s)	698, 1381
BveI	ACCTGC	1 cut(s)	285
Cac8I	GCNNGC	2 cut(s)	349, 1038
CaiI	CAGNNNCTG	1 cut(s)	789
CfoI	GCGC	2 cut(s)	353, 673
Cfr10I	RCCGGY	1 cut(s)	149
Cfr13I	GGNCC	2 cut(s)	433, 1390
CseI	GACGC	1 cut(s)	470
Csp6I	GTAC	3 cut(s)	640, 710, 1066
CspAI	ACCGGT	1 cut(s)	149
CviAII	CATG	9 cut(s)	192, 230, 416, 842, 1216, 1267, 1327, 1386, 1414
CviQI	GTAC	3 cut(s)	640, 710, 1066
DdeI	CTNAG	5 cut(s)	10, 171, 570, 876, 1257
DpnI	GATC	8 cut(s)	410, 633, 1080, 1107, 1155, 1224, 1446, 1467
DpnII	GATC	8 cut(s)	408, 631, 1078, 1105, 1153, 1222, 1444, 1465
EaeI	YGGCCR	1 cut(s)	399
Eam1104I	CTCTTC	3 cut(s)	95, 257, 544
EarI	CTCTTC	3 cut(s)	95, 257, 544
EciI	GGCGGA	2 cut(s)	20, 47
Eco31I	GGTCTC	2 cut(s)	560, 1478
Eco32I	GATATC	1 cut(s)	73
Eco47I	GGWCC	1 cut(s)	433
Eco57I	CTGAAG	2 cut(s)	725, 909
Eco88I	CYCGRG	1 cut(s)	600
EcoO109I	RGGNCCY	1 cut(s)	1390
EcoRII	CCWGG	4 cut(s)	354, 941, 1019, 1398
EcoRV	GATATC	1 cut(s)	73
EcoT22I	ATGCAT	1 cut(s)	331
FaeI	CATG	9 cut(s)	195, 233, 419, 845, 1219, 1270, 1330, 1389, 1417
FalI	AAGNNNNNCTT	4 cut(s)	521, 553, 1052, 1084
FaqI	GGGAC	1 cut(s)	1371
FatI	CATG	9 cut(s)	191, 229, 415, 841, 1215, 1266, 1326, 1385, 1413
FauNDI	CATATG	1 cut(s)	220
FblI	GTMKAC	1 cut(s)	916
Fnu4HI	GCNGC	4 cut(s)	248, 360, 611, 784
FokI	GGATG	3 cut(s)	314, 681, 1036
Fsp4HI	GCNGC	4 cut(s)	248, 360, 611, 784
FspBI	CTAG	5 cut(s)	56, 395, 1037, 1263, 1469
GlaI	GCGC	2 cut(s)	352, 672
GluI	GCNGC	4 cut(s)	248, 360, 611, 784
GsaI	CCCAGC	1 cut(s)	1214
GsuI	CTGGAG	2 cut(s)	656, 1003
HaeIII	GGCC	4 cut(s)	41, 401, 1336, 1392
HapII	CCGG	3 cut(s)	77, 150, 1333
HgaI	GACGC	1 cut(s)	470
HhaI	GCGC	2 cut(s)	353, 673
Hin1II	CATG	9 cut(s)	195, 233, 419, 845, 1219, 1270, 1330, 1389, 1417
Hin6I	GCGC	2 cut(s)	351, 671
HinP1I	GCGC	2 cut(s)	351, 671
HincII	GTYRAC	1 cut(s)	166
HindII	GTYRAC	1 cut(s)	166
HindIII	AAGCTT	1 cut(s)	509
HpaII	CCGG	3 cut(s)	77, 150, 1333
HphI	GGTGA	5 cut(s)	139, 193, 490, 632, 919
Hpy166II	GTNNAC	3 cut(s)	166, 379, 917
Hpy188I	TCNGA	8 cut(s)	13, 50, 573, 1091, 1222, 1227, 1500, 1516
Hpy8I	GTNNAC	3 cut(s)	166, 379, 917
Hpy99I	CGWCG	2 cut(s)	71, 122
HpyAV	CCTTC	7 cut(s)	22, 203, 700, 718, 746, 876, 1133
HpyCH4IV	ACGT	2 cut(s)	162, 682
HpyCH4V	TGCA	7 cut(s)	294, 313, 329, 362, 613, 1121, 1385
HpyF10VI	GCNNNNNNNGC	6 cut(s)	38, 101, 244, 359, 668, 1033
HpyF3I	CTNAG	5 cut(s)	10, 171, 570, 876, 1257
HpySE526I	ACGT	2 cut(s)	162, 682
Hsp92II	CATG	9 cut(s)	195, 233, 419, 845, 1219, 1270, 1330, 1389, 1417
HspAI	GCGC	2 cut(s)	351, 671
Kzo9I	GATC	8 cut(s)	408, 631, 1078, 1105, 1153, 1222, 1444, 1465
LguI	GCTCTTC	1 cut(s)	257
LmnI	GCTCC	1 cut(s)	571
Lsp1109I	GCAGC	3 cut(s)	346, 597, 795
LweI	GCATC	6 cut(s)	285, 316, 338, 747, 790, 1014
MaeI	CTAG	5 cut(s)	56, 395, 1037, 1263, 1469
MaeII	ACGT	2 cut(s)	162, 682
MaeIII	GTNAC	2 cut(s)	152, 1344
MalI	GATC	8 cut(s)	410, 633, 1080, 1107, 1155, 1224, 1446, 1467
MbiI	CCGCTC	1 cut(s)	618
MboI	GATC	8 cut(s)	408, 631, 1078, 1105, 1153, 1222, 1444, 1465
MfeI	CAATTG	1 cut(s)	719
MflI	RGATCY	3 cut(s)	408, 631, 1444
MhlI	GDGCHC	2 cut(s)	48, 1458
MlsI	TGGCCA	1 cut(s)	401
MluCI	AATT	4 cut(s)	559, 719, 1229, 1311
MluNI	TGGCCA	1 cut(s)	401
MlyI	GAGTC	9 cut(s)	2, 74, 151, 161, 592, 932, 991, 1194, 1353
MmeI	TCCRAC	2 cut(s)	436, 1478
Mox20I	TGGCCA	1 cut(s)	401
Mph1103I	ATGCAT	1 cut(s)	331
MroXI	GAANNNNTTC	1 cut(s)	1049
MscI	TGGCCA	1 cut(s)	401
MseI	TTAA	4 cut(s)	138, 308, 651, 1519
Msp20I	TGGCCA	1 cut(s)	401
MspI	CCGG	3 cut(s)	77, 150, 1333
MspR9I	CCNGG	5 cut(s)	77, 356, 943, 1021, 1400
MunI	CAATTG	1 cut(s)	719
MvaI	CCWGG	4 cut(s)	356, 943, 1021, 1400
MwoI	GCNNNNNNNGC	6 cut(s)	38, 101, 244, 359, 668, 1033
NciI	CCSGG	1 cut(s)	77
NdeI	CATATG	1 cut(s)	220
NdeII	GATC	8 cut(s)	408, 631, 1078, 1105, 1153, 1222, 1444, 1465
NheI	GCTAGC	1 cut(s)	1036
NlaIII	CATG	9 cut(s)	195, 233, 419, 845, 1219, 1270, 1330, 1389, 1417
NlaIV	GGNNCC	1 cut(s)	1391
NmuCI	GTSAC	1 cut(s)	152
NsiI	ATGCAT	1 cut(s)	331
NspI	RCATGY	3 cut(s)	419, 1219, 1330
PaeR7I	CTCGAG	1 cut(s)	600
PaqCI	CACCTGC	1 cut(s)	285
PciI	ACATGT	1 cut(s)	415
PciSI	GCTCTTC	1 cut(s)	257
PdmI	GAANNNNTTC	1 cut(s)	1049
PfeI	GAWTC	4 cut(s)	836, 985, 1417, 1511
PflFI	GACNNNGTC	1 cut(s)	431
PflMI	CCANNNNNTGG	1 cut(s)	418
PfoI	TCCNGGA	2 cut(s)	75, 1019
PinAI	ACCGGT	1 cut(s)	149
PkrI	GCNGC	4 cut(s)	249, 361, 612, 785
PleI	GAGTC	9 cut(s)	2, 74, 150, 161, 592, 931, 991, 1193, 1353
PpsI	GAGTC	9 cut(s)	2, 74, 150, 161, 592, 931, 991, 1193, 1353
PscI	ACATGT	1 cut(s)	415
Psp6I	CCWGG	4 cut(s)	354, 941, 1019, 1398
PspFI	CCCAGC	1 cut(s)	1210
PspGI	CCWGG	4 cut(s)	354, 941, 1019, 1398
PspN4I	GGNNCC	1 cut(s)	1391
PspPI	GGNCC	2 cut(s)	433, 1390
PstI	CTGCAG	1 cut(s)	615
PstNI	CAGNNNCTG	1 cut(s)	789
PsuI	RGATCY	3 cut(s)	408, 631, 1444
PsyI	GACNNNGTC	1 cut(s)	431
RsaI	GTAC	3 cut(s)	641, 711, 1067
RsaNI	GTAC	3 cut(s)	640, 710, 1066
SapI	GCTCTTC	1 cut(s)	257
SaqAI	TTAA	4 cut(s)	138, 308, 651, 1519
SatI	GCNGC	4 cut(s)	248, 360, 611, 784
Sau3AI	GATC	8 cut(s)	408, 631, 1078, 1105, 1153, 1222, 1444, 1465
Sau96I	GGNCC	2 cut(s)	433, 1390
ScaI	AGTACT	1 cut(s)	1067
SchI	GAGTC	9 cut(s)	2, 74, 151, 161, 592, 932, 991, 1194, 1353
ScrFI	CCNGG	5 cut(s)	77, 356, 943, 1021, 1400
SduI	GDGCHC	2 cut(s)	48, 1458
SfaNI	GCATC	6 cut(s)	285, 316, 338, 747, 790, 1014
SfcI	CTRYAG	3 cut(s)	588, 611, 1074
Sfr274I	CTCGAG	1 cut(s)	600
SinI	GGWCC	1 cut(s)	433
SlaI	CTCGAG	1 cut(s)	600
SmlI	CTYRAG	1 cut(s)	600
SmoI	CTYRAG	1 cut(s)	600
SpeI	ACTAGT	1 cut(s)	394
Sse9I	AATT	4 cut(s)	559, 719, 1229, 1311
SsiI	CCGC	6 cut(s)	5, 32, 247, 266, 618, 994
SspMI	CTAG	5 cut(s)	56, 395, 1037, 1263, 1469
StyD4I	CCNGG	5 cut(s)	75, 354, 941, 1019, 1398
TaiI	ACGT	2 cut(s)	165, 685
TaqI	TCGA	6 cut(s)	601, 777, 1108, 1156, 1441, 1464
TasI	AATT	4 cut(s)	559, 719, 1229, 1311
TatI	WGTACW	2 cut(s)	639, 1065
TauI	GCSGC	1 cut(s)	250
TfiI	GAWTC	4 cut(s)	836, 985, 1417, 1511
Tru1I	TTAA	4 cut(s)	138, 308, 651, 1519
Tru9I	TTAA	4 cut(s)	138, 308, 651, 1519
TscAI	CASTG	2 cut(s)	705, 1381
TseFI	GTSAC	1 cut(s)	152
TseI	GCWGC	3 cut(s)	359, 610, 783
Tsp45I	GTSAC	1 cut(s)	152
TspDTI	ATGAA	3 cut(s)	218, 683, 1110
TspGWI	ACGGA	2 cut(s)	466, 727
TspRI	CASTG	2 cut(s)	705, 1381
Tth111I	GACNNNGTC	1 cut(s)	431
Van91I	CCANNNNNTGG	1 cut(s)	418
VpaK11BI	GGWCC	1 cut(s)	433
XapI	RAATTY	1 cut(s)	1229
XceI	RCATGY	3 cut(s)	419, 1219, 1330
XhoI	CTCGAG	1 cut(s)	600
XmiI	GTMKAC	1 cut(s)	916
XmnI	GAANNNNTTC	1 cut(s)	1049
XspI	CTAG	5 cut(s)	56, 395, 1037, 1263, 1469
ZrmI	AGTACT	1 cut(s)	1067
Zsp2I	ATGCAT	1 cut(s)	331

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.